Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009675.1 Corchorus olitorius cultivar O-4 contig09707, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9974

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
151--184
17
2.0
17
100
0
68
47
23
5
23
1.73
491--681
50
3.8
50
90
1
274
24
28
11
35
1.90
914--1596
64
10.6
64
87
2
879
25
22
15
35
1.94
914--1596
255
2.7
254
87
3
940
25
22
15
35
1.94
1564--1822
67
3.7
67
82
6
270
30
22
10
37
1.87
1786--1871
43
2.0
43
97
0
163
31
20
10
37
1.87
4607--4645
12
3.1
12
82
13
51
33
20
2
43
1.65
4610--4653
14
3.3
13
84
12
54
38
18
4
38
1.71
8007--8033
9
3.0
9
100
0
54
44
11
22
22
1.84

Tables:   1

The End!