Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009677.1 Corchorus olitorius cultivar O-4 contig09709, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6166

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3818--4047
117
2.0
117
98
0
442
46
21
6
25
1.76
5391--5766
26
14.1
25
71
16
231
28
18
3
49
1.63
5391--5774
106
3.6
104
81
10
393
29
18
3
48
1.63
5600--5763
51
3.2
51
86
6
226
28
18
2
50
1.59
5432--5788
164
2.2
165
89
4
540
28
19
3
48
1.64
5615--5766
77
2.0
78
83
8
195
27
17
1
52
1.55

Tables:   1

The End!