Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009680.1 Corchorus olitorius cultivar O-4 contig09712, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2647

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
436--503
7
9.9
7
81
15
88
14
0
44
41
1.45
449--509
6
9.3
6
81
13
59
14
0
40
44
1.46
427--503
21
3.7
21
84
5
95
15
1
41
41
1.55
436--511
13
5.6
13
86
9
91
15
0
42
42
1.47
1625--1736
13
8.7
13
74
15
99
16
0
38
44
1.53
1624--1736
7
16.4
7
76
13
110
15
0
38
45
1.53

Tables:   1

The End!