Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009694.1 Corchorus olitorius cultivar O-4 contig09726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21549

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2180--2269
43
2.1
42
84
10
112
33
10
20
36
1.86
2252--2429
64
2.8
64
93
0
302
42
14
12
30
1.83
2386--2641
131
2.0
130
90
2
406
37
11
18
33
1.86
9187--9258
36
2.0
36
100
0
144
38
16
11
33
1.84
12488--12672
60
3.0
60
91
3
289
30
15
18
35
1.92
17116--17224
36
3.0
36
98
0
209
27
22
16
33
1.96
19155--19188
4
8.5
4
93
0
59
23
0
26
50
1.50

Tables:   1

The End!