Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009701.1 Corchorus olitorius cultivar O-4 contig09733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11478

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2100--4010
332
5.7
327
72
14
1130
37
16
14
31
1.89
4072--5729
325
5.1
320
75
11
1154
34
17
14
33
1.90
4333--5729
650
2.1
641
78
10
1453
34
17
14
33
1.90
6375--9995
670
5.5
657
75
10
2808
35
17
14
33
1.90
6375--7547
334
3.5
330
81
4
1281
35
17
13
34
1.89
7557--9995
333
7.4
329
76
8
2056
34
17
14
33
1.90

Tables:   1

The End!