Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009718.1 Corchorus olitorius cultivar O-4 contig09750, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3549

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
190--287
33
3.0
33
93
0
160
16
32
36
14
1.89
310--379
26
2.6
25
82
13
77
58
1
0
40
1.07
345--380
8
4.2
8
86
13
54
63
0
0
36
0.94
342--399
26
2.2
26
82
11
66
68
0
0
31
0.89
1137--1204
35
1.9
35
96
0
127
29
5
35
29
1.81

Tables:   1

The End!