Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009719.1 Corchorus olitorius cultivar O-4 contig09751, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3888

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
736--786
22
2.3
22
96
0
93
39
0
19
41
1.52
1817--1915
22
4.5
22
71
20
73
40
14
9
36
1.77
1817--1893
22
3.5
22
78
16
79
40
12
9
37
1.76
2000--2164
43
3.8
43
76
8
140
33
15
10
39
1.83
1943--2168
22
10.2
22
73
9
156
34
14
10
40
1.80
1943--2168
45
5.1
43
74
8
159
34
14
10
40
1.80
2242--2284
22
2.0
22
95
0
77
37
18
13
30
1.90
2914--3418
22
22.7
22
66
14
166
40
9
14
35
1.79
3303--3440
22
6.3
22
70
13
63
37
7
13
41
1.73
3622--3734
60
1.9
60
83
7
149
39
7
13
38
1.74
3452--3760
22
14.4
22
69
13
144
37
8
16
37
1.79
3774--3827
22
2.5
22
75
6
56
37
9
12
40
1.76

Tables:   1

The End!