Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009720.1 Corchorus olitorius cultivar O-4 contig09752, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4579

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
223--291
31
2.2
31
94
0
120
36
13
15
34
1.87
1315--1372
22
2.7
21
80
17
73
60
1
0
37
1.07
1296--1370
7
10.6
7
77
18
66
54
1
0
44
1.08
1336--1384
25
2.0
25
91
0
80
65
0
0
34
0.93
1651--2069
174
2.4
174
90
3
675
39
12
11
36
1.79
2877--2918
6
7.2
6
89
7
52
9
16
0
73
1.08
3147--3339
107
1.8
107
89
2
307
39
8
10
40
1.71

Tables:   1

The End!