Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009727.1 Corchorus olitorius cultivar O-4 contig09759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5779

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--143
60
2.4
60
83
4
182
28
15
18
37
1.92
279--315
15
2.4
16
86
4
58
54
2
0
43
1.14
565--626
8
7.2
8
80
20
56
51
0
22
25
1.48
587--626
5
8.4
5
79
20
50
55
0
20
25
1.44
572--628
10
5.3
10
77
22
62
52
0
21
26
1.47
3938--4061
62
2.0
62
96
0
230
33
23
7
36
1.82

Tables:   1

The End!