Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009731.1 Corchorus olitorius cultivar O-4 contig09763, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9380

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
599--631
13
2.5
13
95
5
57
39
0
0
60
0.97
688--733
21
2.2
22
77
14
53
39
8
2
50
1.46
1204--1239
15
2.4
15
95
0
63
33
11
13
41
1.80
3738--3762
3
8.3
3
100
0
50
68
32
0
0
0.90
5391--5593
105
1.9
105
92
0
343
33
23
14
28
1.94
7411--7461
27
1.9
26
84
4
66
41
3
1
52
1.31
7419--7467
2
24.0
2
82
12
55
42
2
2
53
1.24

Tables:   1

The End!