Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009761.1 Corchorus olitorius cultivar O-4 contig09793, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18493

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2102--2701
322
1.9
314
85
4
817
35
16
14
33
1.88
3431--3458
13
2.2
13
100
0
56
60
0
0
39
0.97
3697--3743
25
1.9
25
82
4
60
63
8
8
19
1.48
4937--4978
19
2.3
18
80
15
50
61
2
2
33
1.21
11773--14971
619
5.0
624
76
11
2145
36
16
14
33
1.89
12389--15302
332
8.8
329
78
7
2608
36
16
14
33
1.88
16138--16180
21
2.1
21
86
4
61
62
6
9
20
1.48

Tables:   1

The End!