Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009766.1 Corchorus olitorius cultivar O-4 contig09798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7797

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3418--3688
111
2.6
103
84
9
336
40
8
8
42
1.67
4430--4705
107
2.6
104
88
4
394
39
8
9
42
1.67
5754--5785
14
2.3
14
94
0
55
81
0
18
0
0.70
7517--7797
41
6.7
43
87
6
396
41
27
9
20
1.83
7517--7796
84
3.3
84
88
3
404
41
27
9
21
1.84
7517--7797
125
2.2
127
94
1
485
41
27
9
20
1.83

Tables:   1

The End!