Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009770.1 Corchorus olitorius cultivar O-4 contig09802, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2860

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1179--1309
33
4.0
33
85
4
167
19
35
35
8
1.82
1953--2021
31
2.3
30
87
5
95
31
15
13
39
1.86
2176--2260
31
2.8
30
89
8
129
45
11
12
29
1.78
2176--2270
31
3.1
31
85
10
124
44
10
12
32
1.77
2414--2841
172
2.4
172
86
5
547
51
2
9
35
1.48

Tables:   1

The End!