Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009789.1 Corchorus olitorius cultivar O-4 contig09821, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3740

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--243
135
1.8
134
96
0
450
20
23
20
36
1.95
679--708
14
2.1
14
93
0
51
46
6
16
30
1.73
2695--2738
19
2.4
19
88
3
63
36
22
9
31
1.86
2689--2756
18
3.5
19
82
6
66
35
27
7
29
1.84
3132--3172
8
5.1
8
100
0
82
24
0
24
51
1.49
3171--3227
2
29.5
2
80
7
55
42
0
3
54
1.17

Tables:   1

The End!