Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009790.1 Corchorus olitorius cultivar O-4 contig09822, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3627

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--44
2
22.0
2
95
0
79
52
0
0
47
1.00
142--803
22
30.3
21
71
12
331
35
15
9
39
1.80
882--1122
22
10.9
22
74
6
112
34
14
9
40
1.80
1168--1285
22
5.4
21
74
12
103
33
18
8
39
1.81
1170--1285
44
2.6
44
83
4
144
33
18
8
38
1.82
1303--1504
22
9.0
22
73
11
153
38
17
9
35
1.82
2695--2728
2
16.5
2
93
6
59
47
0
2
50
1.16

Tables:   1

The End!