Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009798.1 Corchorus olitorius cultivar O-4 contig09830, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3439

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1300--1333
16
2.1
16
89
10
52
35
0
0
64
0.94
1952--2212
77
3.4
77
83
5
260
28
17
15
38
1.90
2157--2291
72
1.9
72
85
3
191
25
22
15
35
1.94
1929--2521
38
15.5
38
74
10
302
26
19
16
36
1.93
1929--2525
39
15.6
39
75
8
388
26
19
16
37
1.93
2812--2886
37
2.0
37
100
0
150
28
16
10
45
1.80
3286--3325
19
2.1
19
100
0
80
70
5
20
5
1.26

Tables:   1

The End!