Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009818.1 Corchorus olitorius cultivar O-4 contig09850, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5962

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--27
2
13.5
2
100
0
54
48
0
0
51
1.00
278--347
35
2.0
35
100
0
140
34
20
11
34
1.88
552--588
19
2.0
19
89
5
58
35
0
0
64
0.94
4432--4477
12
3.4
13
82
17
58
60
2
0
36
1.09
4421--4479
18
3.4
18
74
6
59
59
1
0
38
1.08

Tables:   1

The End!