Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009823.1 Corchorus olitorius cultivar O-4 contig09855, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2714

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
368--412
23
1.9
24
90
4
74
53
15
2
28
1.54
368--416
12
4.2
12
92
2
73
57
14
2
26
1.48
406--438
17
2.0
17
94
5
59
54
6
15
24
1.63
2352--2455
54
1.9
54
96
0
190
36
10
24
28
1.89
2473--2579
55
1.9
55
84
3
144
31
13
28
27
1.93
2279--2607
121
2.7
120
89
2
469
36
13
24
26
1.92
2550--2714
64
2.6
64
90
0
249
34
15
21
28
1.94

Tables:   1

The End!