Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009830.1 Corchorus olitorius cultivar O-4 contig09862, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17610

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2904--2936
17
1.9
17
93
0
57
15
9
24
51
1.72
3236--3387
48
3.2
48
91
2
245
36
10
28
24
1.88
5821--5985
15
11.0
15
94
0
294
47
12
32
6
1.68
6521--6884
117
3.1
117
95
0
658
38
15
23
21
1.92
11339--11532
61
3.3
59
82
7
245
32
23
21
22
1.98

Tables:   1

The End!