Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009839.1 Corchorus olitorius cultivar O-4 contig09871, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8779

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5737--5776
13
2.8
13
85
14
53
70
15
0
15
1.18
6339--6492
48
3.1
48
85
3
209
31
16
12
38
1.86
6347--6494
50
3.0
50
87
2
210
31
16
13
37
1.88
6918--7121
91
2.2
91
92
0
327
28
18
14
38
1.90
7200--7385
50
3.7
50
94
1
302
27
30
15
26
1.96
7447--7677
100
2.3
100
90
3
365
35
11
25
28
1.90
7447--7652
50
4.1
50
92
1
351
34
11
26
27
1.91
7952--8095
27
5.3
27
77
10
132
22
19
22
35
1.96
8023--8098
29
2.7
29
87
4
102
23
15
23
36
1.94

Tables:   1

The End!