Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009842.1 Corchorus olitorius cultivar O-4 contig09874, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7674

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1738--1816
22
3.7
21
88
3
106
41
18
12
26
1.87
3231--3286
22
2.5
22
79
0
67
37
17
8
35
1.82
3274--3345
22
3.2
22
75
21
76
43
8
16
31
1.78
3485--3531
22
2.1
22
88
0
67
38
10
19
31
1.86
3532--3799
22
11.8
22
69
12
116
39
11
15
33
1.84
3586--3640
28
1.9
29
89
10
87
43
9
7
40
1.64
3480--3681
72
2.7
76
79
8
218
37
11
15
35
1.84
3816--3942
22
5.7
22
66
11
62
37
10
15
37
1.82
6021--6061
21
1.9
22
90
5
66
46
29
14
9
1.77

Tables:   1

The End!