Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009876.1 Corchorus olitorius cultivar O-4 contig09908, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  2387

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
814--1452
121
5.3
118
88
4
818
48
19
13
19
1.81
814--1452
30
21.2
30
89
3
856
48
19
13
19
1.81
1665--1922
36
7.3
36
78
11
212
41
18
19
20
1.90
1747--1812
31
2.1
31
91
0
105
42
18
21
18
1.89
1928--2058
35
3.7
35
82
0
154
37
19
23
19
1.94

Tables:   1

The End!