Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009905.1 Corchorus olitorius cultivar O-4 contig09937, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11122

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--284
41
6.8
42
80
10
316
20
10
26
42
1.84
1--283
84
3.4
84
90
4
455
20
10
26
42
1.85
466--516
26
1.9
27
92
4
86
47
13
3
35
1.62
2106--2161
29
1.9
29
82
13
71
48
3
3
44
1.37
2257--2357
31
3.3
30
75
10
98
36
11
18
32
1.88
2254--2339
29
2.9
29
74
10
93
36
9
18
36
1.83
2425--2454
8
3.8
8
95
0
51
83
16
0
0
0.65
6447--6477
2
15.5
2
93
0
53
45
0
3
51
1.17
7825--7859
3
11.7
3
100
0
70
65
0
0
34
0.93

Tables:   1

The End!