Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01000992.1 Corchorus olitorius cultivar O-4 contig00992, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5071

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
283--325
20
2.1
21
91
4
70
53
9
13
23
1.69
373--448
21
3.6
21
83
3
98
39
7
10
42
1.69
329--452
43
2.9
43
86
1
158
37
7
12
43
1.70
285--452
22
7.9
21
72
7
99
41
7
12
38
1.72
1211--1252
7
6.1
7
83
5
59
73
4
0
21
1.01
1209--1256
21
2.3
22
82
17
66
70
4
0
25
1.04

Tables:   1

The End!