Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009950.1 Corchorus olitorius cultivar O-4 contig09982, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10476

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1119--1265
57
2.6
56
90
6
228
50
4
23
21
1.67
2337--2367
16
1.9
16
100
0
62
38
0
9
51
1.35
3383--3410
2
14.0
2
100
0
56
50
0
0
50
1.00
3412--3457
21
2.2
21
100
0
92
52
13
19
15
1.75
5365--5459
3
32.0
3
81
10
106
35
2
0
62
1.07
5365--5459
17
5.4
17
81
12
93
35
2
0
62
1.07

Tables:   1

The End!