Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009952.1 Corchorus olitorius cultivar O-4 contig09984, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3201

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
509--534
11
2.4
11
100
0
52
7
15
7
69
1.35
1325--1366
15
2.7
15
92
3
66
11
9
14
64
1.50
1919--2206
50
5.8
50
90
0
441
30
28
13
27
1.94
2263--2598
50
6.6
50
91
4
505
34
11
26
27
1.91
2263--2598
102
3.3
102
92
2
527
34
11
26
27
1.91
2459--2539
27
3.1
27
61
25
66
32
14
27
25
1.95
2263--2575
152
2.1
154
92
3
526
34
11
26
27
1.91
2271--2624
152
2.3
151
87
7
450
34
12
26
27
1.92

Tables:   1

The End!