Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009986.1 Corchorus olitorius cultivar O-4 contig10018, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14657

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5769--5796
2
14.0
2
100
0
56
50
0
0
50
1.00
6226--6253
2
14.0
2
100
0
56
50
0
0
50
1.00
6504--6544
2
20.5
2
84
0
55
48
0
4
46
1.23
7878--7903
13
2.0
13
100
0
52
7
23
23
46
1.78
8748--8798
27
1.9
27
84
4
68
27
9
19
43
1.82
11449--11473
11
2.3
11
100
0
50
92
0
8
0
0.40
12201--12298
23
4.3
23
97
0
178
15
43
33
7
1.74
12374--12403
4
7.8
4
92
7
53
76
0
0
23
0.78
12401--12454
12
4.5
12
76
21
51
72
0
24
3
1.01

Tables:   1

The End!