Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWUE01009988.1 Corchorus olitorius cultivar O-4 contig10020, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1232

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
450--514
22
3.0
22
83
0
76
27
21
3
47
1.65
450--517
14
4.7
14
76
16
59
26
22
2
48
1.64
577--940
36
10.0
36
78
13
317
30
21
1
46
1.60
681--917
73
3.2
74
80
13
267
30
21
1
45
1.60
846--950
22
4.7
22
82
6
122
30
21
0
46
1.58
868--939
30
2.5
28
73
19
58
30
22
1
45
1.61
546--940
14
28.1
14
70
20
224
30
21
2
46
1.63
918--1160
113
2.1
118
86
7
334
27
22
9
41
1.84
918--1187
56
4.6
57
81
9
283
26
22
8
41
1.83
1156--1203
24
2.0
24
87
0
69
20
25
6
47
1.73
1156--1194
16
2.4
16
86
0
51
20
28
5
46
1.72

Tables:   1

The End!