Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167926.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_19, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 20060819
ACGTcount: A:0.34, C:0.16, G:0.16, T:0.34
Warning! 113000 characters in sequence are not A, C, G, or T
File 109 of 117
Found at i:18915054 original size:26 final size:26
Alignment explanation
Indices: 18915018--18915070 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18915008 GTTGACTTAG
18915018 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18915044 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18915070 G
1 G
18915071 ATCAGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:18915935 original size:26 final size:26
Alignment explanation
Indices: 18915906--18915958 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18915896 GTTGACTTAG
18915906 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
18915932 GCATATGGAGTTCATTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18915958 G
1 G
18915959 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:18916838 original size:26 final size:26
Alignment explanation
Indices: 18916809--18916862 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
18916799 TGGGTTGACT
18916809 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCATACGGAGTTCATTCCCAGTC
* * *
18916835 TAGGCTTACGGAGTTCATTTCGAGTC
1 TAGGCATACGGAGTTCATTCCCAGTC
18916861 TA
1 TA
18916863 AGATCGGTCC
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.22, C:0.22, G:0.24, T:0.31
Consensus pattern (26 bp):
TAGGCATACGGAGTTCATTCCCAGTC
Found at i:18918602 original size:26 final size:26
Alignment explanation
Indices: 18918565--18918617 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18918555 GTTGACTTAG
18918565 GCATACGAAGTTCATTCCCAATCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
* *
18918591 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
18918617 G
1 G
18918618 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAATCTAA
Found at i:18920346 original size:26 final size:26
Alignment explanation
Indices: 18920316--18920368 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18920306 GTTGACTTAG
*
18920316 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
18920342 GCATACTGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18920368 G
1 G
18920369 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:18920747 original size:893 final size:889
Alignment explanation
Indices: 18910511--18926717 Score: 15063
Period size: 893 Copynumber: 18.0 Consensus size: 889
18910501 AGTATTGGTA
** *
18910511 GCACGCTCGTTTCGTGGGTTGACTTAGGCATATAGAGTTCATTCCCAGTCTAAGTATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* ** ** *
18910576 CATTCCCAGTCTAATATTGGACCATACCGAGGGTTGC-AGTAGCACATGCTGGGCTCGGGCATGT
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGA-CAGCACATGCTGGGCTCGGGCATGT
* * * *
18910640 GCTAGTG-TCACATTTTTCTTCGTTGGGGCACCATCGA-CGGAGCATCGCTGGAGAACCT-AGCC
130 GCTGGTGCT-GCATTTTTCTTCGTCGGGGCACCATC-ACCGGAGCATCGCCGGAGAACCTGA-CC
*
18910702 GGCGGCATTGGGGTTCTGGCGAT-GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
192 GGCGGCATTGGGGTTC-GGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTG
* *
18910766 CTGGTACTTGGCCCTTATATTGGCCTCCTACCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
256 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* *
18910831 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACGCT
321 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* *
18910896 TTCTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTTGCATG-CA
386 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * *
18910960 AATAAAAATACAAGGATAACGTCTACAAAGTTTGGGGCCAAAACTCTTTCTGAAAAAATTTAAAA
451 AA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
** * ** *
18911025 AAATCCCGAACCGTAAAAAGTTTCAAAAATCGTAAAAAATAGCGAACGAGTCATCTTGCCATGAA
515 AAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
** *
18911090 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACCTGCCATAAAAATGGCATTGGCACA
580 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
* * * * * * *
18911155 TAGAAATATAAAGATATGCTTAAACCCACCTACTACCCTATCCATCGACGGCTTACGCATCCCGT
645 TAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * * *
18911220 CTCTCTGGCCGACGTAGTGCTCGCCTGCTCATTTCGTCAGATGGCTTAGGCATACGGAGTTCATT
710 CTCTCTGGCCGACGTAGTGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
*** * * * * *
18911285 ATGAGTCTAAG-ATTGGATCGGACTGAGGGTTGTGGCAGCAGGATCGACAGCACGTAGAGGGGGA
775 CCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGGA
** * * *
18911349 CCCGGTCGATCCCCGACTTGCGCATCTCGCCCCACTGGCCGGCTGAGCGCCC
839 CCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
*
18911401 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * * *
18911466 CATTCTCAGTCTAAGATCGGACCGAACCGAGGGTTACGACAGCACATGTTGGGCTCGAGCATGTC
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * * * *
18911531 CTAGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCTGGAGAACCTGACCGGCG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* ** * * * *
18911596 GCATTAGGGTTTCGATGATCAGGGGGGCCTGGGGGGTTGTGCGCACATGATGTCCGATGCGTGCT
196 GCATT-GGGGTTCGGCGATCGGGGGGGCC-GGGGGG-TGTGCACACATGATGTGCGATGGGTGCT
18911661 GGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCCTTAA
258 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCCTTAA
* * * *
18911725 AGAGCATTGGTGATTTTACAGGTTTGCGGCCAGTAACCATTAAAGTGTCTGAAATGGGGACACTT
322 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* *
18911790 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTATGCATGCCAA
387 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
** * * *
18911855 CCAAAATACAAGGATCACGTCTACCAAGTTTGGCGCCAAAACTCTTTTCGAAAAAATTTTAAAAA
452 AAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
*
18911920 ATCCCGAACCGTAAAAAGTTTTG-AAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAAC
517 ATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
18911984 TTCACATGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCA-ACAAAATGGCATTGGCACGT
582 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA-AAAATGGCATTGGCACGT
* **
18912048 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTATGCATCCCGTC
646 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
*
18912113 TCTCTGGCCGACGTAGTGCTCGTCCGCCCACCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCATA
711 TCTCTGGCCGACGTAGTG--C--CCG----CCTG--C--TCGTTTCGTCGGTTGGCTTAGGCATA
* * * *
18912178 CAGAGTTCATTCCCAGTCTAAG-ATCAGACCAGA-TCAAGGGTTGCGGCAGCAGGATCGGCAGCA
764 CGGAGTTCATTCCCAGTCTAAGAATCGGACCGGACT-GAGGGTTGCGGCAGCAGGATCGGCAGCA
* ** * * * * *
18912241 CGTAGAGGGGGACCCGGTCGAT-CTCGGCTTGCGCATCCCGCCCCTCTAGCCGGCTGAGCGCCT
828 CGCAGA-GGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCT-GGCGACTGAGCGCCC
* * * * * *
18912304 GTATGTTCGTTTTGTGGGTTGACTTAGGCATACGAAGTTCATT-CC---C-AATC-TA---AG--
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * *
18912358 -A-T--C-G-----GATCAGACC--A---AGGGTTGTGGCAGCACATGCAGGGCTCAGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* ** * ** ** * * *
18912408 TTGGTGCCACATTTTTCATCACCGGGGCACCATCGTCGGAGCATCGTCGAAGAACCTGACCGACG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
** * * *
18912473 GCATTGGGGTTTCGGCGATTAGGGGGACCGAGGGGGGTGTGCGCACATCATGTGCGATGGGTGCT
196 GCATTGGGG-TTCGGCGATCGGGGGGGCC--GGGGGGTGTGCACACATGATGTGCGATGGGTGCT
*
18912538 GGTGCTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
258 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * **
18912602 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATTGGGATGCTTT
323 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
18912667 TTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
388 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
* * * **
18912732 AAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAACACCCCTTCTAAAAAAATTTTTAAAAA
453 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTTAAAAA
* ** ** * *
18912797 ATCCCAAACCCAAAAAAGTTTAAAAAATCAATG-AAAATAGAAAACGGGTCGTCTTGCCATGAAA
517 ATCCCGAACCGTAAAAAGTTTTGAAAATC-GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
*
18912861 CTTTCACGTGAA-GCTTAAGGG-CCATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCATG
581 C-TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
* * * * * * *
18912923 CAGAAAT-TGGCTAGATGTGCCTAAAGCCACCTATCACCCTAATCGATTCACGGCTT-AGAATCC
645 TAGAAATAT-G-AAGATGTGCCTAAACCCACCTACCACCCT-ATCGATCCACGGCTTGCGCATCC
* * * * *
18912986 TGTCTTTCTGGGCCGGTGTATGCCCGCTCGCCCGCCCGCCTGCCCGCTCGTTTCATCGGTTGGCT
707 CGTCTCTCT-GGCC---G-A----CG-TAG--TGCCCGCCT----GCTCGTTTCGTCGGTTGGCT
* * * ** * *
18913051 TAAGGCCATTA-GGAGTTCATTCCCAGTCTAAG-ATTGAACCCGACCAAGGGTTGCAGCAGTAGG
756 T-AGG-CA-TACGGAGTTCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGG
* * * ** * * * * *
18913114 ATCGGTAGCACGCAGAGAGGGACCTGATCGATCCCC-AGCTTATGCATCTCGCCCTTGTAGCCGG
818 ATCGGCAGCACGCAGAG-GGGACCCGACCGATCCCCGA-CTTGCGCATCCCGCCCCTCT-GGCGA
*
18913178 CTGAGTGCCC
880 CTGAGCGCCC
* * *
18913188 GCACGCTCGTTTCATGGGTTGACTTAGGCATAC-GAGTTCGTTCCTAGTCTAAGCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * * * *
18913252 CATTCCAAGTCTAAGATCGGATCAGACCGAGGGTTGCGATAGCAAATGTTGGGCTCGAGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * * * * * ** ** * * **
18913317 CTGGGGCCGTATTTTTCTTTGCCGGGGCATCATCGTCGGAGCATCATCAGAGAACTTGACCGGTA
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
*** *
18913382 GCATTGGGGTTCCAATGATCGGGGGGGCCGGGGGGTGGTGTGCGCACATGATGTGCGATGGGTGC
196 GCATTGGGGTT-CGGCGATCGGGGGGGCC--GGGG-GGTGTGCACACATGATGTGCGATGGGTGC
*
18913447 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAA
257 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* * * *
18913512 AGAGCATTTGAGATTTTACAAGTTTGCTACCTGTAGCCGTTAAAGTGTCTGAAATGGGGACACTT
322 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
*
18913577 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCACGCCAA
387 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * *
18913642 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACACCGTT-CTAAAAAATTTTAAAA
452 AAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCGAAAAAATTTTAAAA
* * **
18913706 AATCCTGAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
516 AATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
*
18913771 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAT
581 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGT
* *
18913836 AGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTC
646 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * *
18913901 TCTCTGGCCGGCATAGTGCTCGCCCGCCCGCCCACCCGTTCGTTTCGTCGGTTGGCTTAGGCATA
711 TCTCTGGCCGACGTA--G-T-GCCCGCCTG------C--TCGTTTCGTCGGTTGGCTTAGGCATA
* * * * ** * * *
18913966 CGGAGTTGATTTCTAGTCTAAG-ATCGAACCCAACCGAGGGTTGCGGCAGCAGGATAGACAGCAC
764 CGGAGTTCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCAC
* * ** ** * * *
18914030 GTAGAGGAGGTCCCGGTCGATCCCCGGTTTGCGCATCCCGCCCCTATGGCCGGCTGAGCGCCT
829 GCAGAGG-GGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* * * * *
18914093 GCACGCTAGTTTCGTGGGTTGACTTAGGCATACGGTGATCATTCCTAGTCTAAGCATACGAAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * *
18914158 CATTCCCAATCTAAGATCGGACCGGACCGAGGGCTGC-AGCAGCACATGTTGGGCTCAGGCATTT
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGA-CAGCACATGCTGGGCTCGGGCATGT
** * * ** * *
18914222 GCTGGTGCCACATTTTTCTTTGTCGGGGCACCATCGA-CGGAGCA-CGTCAAAAAACCTGACCGA
130 GCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATC-ACCGGAGCATCGCCGGAGAACCTGACCGG
* * *
18914285 CGGCATTGGGGTTCCAGCGATCGGGGGGGCCGGGGGGTGTG-GCACATGATGTGCCATGGGTGCT
194 CGGCATTGGGGTT-CGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCT
*
18914349 GGTACTTGGCCCTTATACTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCCTTAA
258 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCCTTAA
* * *
18914414 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTAAAATGGGGACACGT
322 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * * * *
18914479 TTTTCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTGAGCTGAATTTTTTTGTACATGCTAT
387 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * * * * * * *
18914544 CAAAAATACAAGGATCATGTCCACCATGTTTGGGGCAAAAAATCCTTTCGAAAAAATTTAAAAAA
452 AAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * *
18914609 ATCTCGAACCGTAAAAA-TTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAA
517 ATCCCGAACCGTAAAAAGTTTT-GAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * *
18914673 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGC
581 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGT
* * *
18914738 AGAAATATGAAGATGTGCCTAAACCCACCTACCAACCTATCGATCCATGACTTGCGCATCCCGTC
646 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* *
18914803 TCTCTGGCCGACGTCGAGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACAGA
711 TCTCTGGCCGACGT--A----G--TGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * ** * * *
18914868 GTTCATTCCCAGTGTAAG-ATTGGACTAGA-TCGAGGGATGCGACAGCAGGATCGACTA-CACGC
768 GTTCATTCCCAGTCTAAGAATCGGACCGGACT-GAGGGTTGCGGCAGCAGGATCGGC-AGCACGC
* * * * * * ** * * *
18914930 ACAGGGGGACTCGATCGATCCTCGGCTTACGCATCTTGCCCCTCTGGTTGGCTGAGCACCC
831 AGA-GGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
18914991 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * *
18915056 CATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGTGGCAGCACATGCTAGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
** * * * * *
18915121 CTGGTGCCACATTTTCCTTCGCCGGGGCACCATCGCCCGAGCATCGCCAGAGAACCTGACCGGCG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * *
18915186 G-ATTGGGGTTCCAGTGATCGGGGGGGCCGGGGGGCGTGCGCACATGATGTGCGATGGGTGCTGG
196 GCATTGGGGTT-CGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGG
* * *
18915250 TACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAAACCTTGACAACTCACACCCCCTTAAAGA
260 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* *
18915315 GCATTTGAGATTTTACAGGTTTGCTGCCAGTTGCCATTAAAGTGTCTGAAATGGAGACACTTTTT
325 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * *
18915380 TCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGGCAACAA
390 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
*
18915445 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAAAAATTTTAAAAAATC
455 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * * ** * *
18915510 CTGAATCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGCCTTGCCATGAAACTTC
520 CCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
18915575 ACGTGAAGGCTTAAGGGACCATTGTATGAA--T--------T-----TGGCATTGGCACGTAGAA
585 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAA
* * * *
18915625 ATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTTTCTT
650 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
*
18915690 TGGCCGACGTAGTGCCTGCCCGTCCGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
715 TGGCCGACGTA--G--TG--C--CCG----CCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * ** * **
18915755 GTTCATTCCCAGTCT-AGAGATCAGATC-GAGCTGAGGGTTACGGCAGCAGGATCAACAGGACAT
768 GTTCATTCCCAGTCTAAGA-ATCGGACCGGA-CTGAGGGTTGCGGCAGCAGGATCGGCAGCACGC
** ** * **
18915818 AGAGGGGCACCCGGTCGATCCCCGGA-TTGCGCATCCCATCCCTTTGGCCGGTTGAGCGCCC
831 AGAGGGG-ACCCGACCGATCCCC-GACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* *
18915879 GTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * **
18915944 CATTCCCAGTGTAAGATCAGACCGGACCAAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * ** * * *
18916009 CTGGTGCTGCATTTGTCTTCGTCGGGGCACCATTACCGGAGCATCATCGGAAAACCTGATCGACG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * *
18916074 GCATTGGGGTTCCGACGATCGGGAGGGCCGGGGGGGTGTGCGCACATGATGTGCCATGGGTGCTG
196 GCATTGGGGTT-CGGCGATCGGGGGGGCC-GGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
* *
18916139 GTACTTGGCCCTTATATTGGCGCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAACG
259 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* *
18916204 AGCATTTGAGATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
324 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * * * * *
18916269 TTCAAATGGTTATAAAATGTTGTACACTTCGTGTTTTTAGCTAAATTTTTTTATGCATGCCAAAA
389 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AAA
* *
18916334 AAAAAGTACAAGGATCACGTCTACCAATTTTGGGGACAAAACTCCTTCCGAAAAAATTTTAAAAA
453 AAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* ** ** * *
18916399 ATCTCGAACCCCAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGCCTTGCCATGAAAC
517 ATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* * *
18916464 TTCACGTGTAGGCTTAAGGGACCATTGTAAGAATTTACAAGCCA-AAAAATTGCCATTGGCACGT
582 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA-TGGCATTGGCACGT
*
18916528 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATC
646 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* *
18916593 TCTTTGGCCGACGTAGTGCCCGTCTGCCCGTCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGAATA
711 TCTCTGGCCGACGTAGTG-CC--C-G-CC-T------GCTCGTTTCGTCGGTTGGCTTAGGCATA
* * * * ** * *** * * *
18916658 CGAAGTTCATTCCGAATCTAAG-ATCAGACTAGATTGAGGGTTGCAATAGTAGGATCGACAGCAT
764 CGGAGTTCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCAC
* * * * * * *
18916722 GCAGAGGGGGACCCGGCTGATCCCCGGCTTACGCATCCCGTCTCTCTGGCCGGCTGAGCGCCC
829 GCAGA-GGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* ** * *
18916785 GTACGCTTATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAGGCTTACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * ** * *
18916850 CATTTCGAGTCTAAGATCGGTCCAGAGTGAAGGTTGCGACAGCACATGCTGGGCTCGAGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * *
18916915 CTGGT-CTTGCATTTTTCTTCGTCGGGG---CAT--------CTTTGTCGGAGAA-CTGACCGGC
131 CTGGTGC-TGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGC
* * *
18916967 GGCATTTGGGTTCCGGCGATCGGGGGGGCCGAGGGGTGGTGTGCGCACATGATGTGCCATGGGTG
195 GGCATTGGGGTT-CGGCGATCGGGGGGGCC--GGGG-GGTGTGCACACATGATGTGCGATGGGTG
*
18917032 CTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
256 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
18917097 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
321 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* *
18917162 TTTTTCAAATGGTCACAAAATCTT-TACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCC
386 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
*
18917226 AAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTT-AAA
451 AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * *
18917290 AATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAA
516 AATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * * *
18917355 CTTCACGTCAAAGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
581 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGT
* * * * * *
18917420 AGAAATATAAAGATGTGCCTAAACCCACCTACCACCGTATCGATCAATGGCTTGTGCATCCGGTC
646 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * * *
18917485 TTTCTGGCCGGCGTTGTGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCGTATGGA
711 TCTCTGGCCGACGTAGT--------GCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * ** * * **
18917550 GTTCATTCCCAATCTAAG-ATCGGACTGGACTGAGTGTTATGGTAGCAGGATCGACAGCATACAG
768 GTTCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* * * * * * *
18917614 AGTGGGACCTGACCGATCCCTGGCTTGTGCATCTCGCACCTCTGGCCGACTGAGCGCTC
833 AG-GGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
*
18917673 GCACGCTCGTTTCAT-GG--G---T-----T---GA---C-TT---AG-----GCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * *
18917712 CATTCCCAGTCTAAGATCAGACCGGACTGATGGTTACGATAGCACGTGCTGGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * * *
18917777 CTGGTGCTGCATTTGTCTTCGTCAGGGCCCCATCACCGGAGCATCACCGGAGAACCTGACCGGTC
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGG-C
* *
18917842 -GCATTAGGGTTCCGACGATC------G--GGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
195 GGCATTGGGGTT-CGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
*
18917898 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAG
259 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * * *
18917963 AGCGTTTGAGATATTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTAAAATGGGGACACTTTT
324 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * * *
18918028 TTCAAACGGTCATAAAATCTTGTACACTTCGTGTTTTTAGCTGAATTTTTTTATGCATGCCAAAA
389 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * *
18918093 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACCCCTTTCTAAAAAATTTTAAAAAAT
454 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
** *
18918158 CCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
519 CCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * * * * * *
18918223 CACGTGTAGGCTTAAAGGTCCATTATAAGAATTTACAAGGCA-AAAAATTGGAATTGGCACGTAG
584 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA-TGGCATTGGCACGTAG
* * *
18918287 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTACGCATCCCATCTC
648 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * * * *
18918352 TTTGGCCGACGTCATGCCCGCCCGCCCGCCCACTCGTTTCATCGGTTGGCTTAGGCATACCGAGT
713 TCTGGCCGACGT-A-G--TGCCCGCCTG----CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * * * *
18918417 TCATTCCCAATCTAAGAAT-GGACTGGACTGAGGGTTGCGACAGCAAGATCGACAGCACGTAGAG
770 TCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAG
* * * * * * *
18918481 GGGAACCCGACTGATCCCCAACTTGTGCATCCTGCCCTTCTAGCTGGCTGAGCGCCC
835 GGG-ACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGC-GACTGAGCGCCC
* *
18918538 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAATCTAAGCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * *
18918603 CATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTGGCAGCACAAGCTGGGCTCGAGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * *
18918668 CTGGTG-TCGTATTTTTCTTTGTCGGGG------CA-C----CATCGCCAGAGAACCTGACCGGC
131 CTGGTGCT-GCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGC
* * * ** *
18918721 GGCATTGGGGTTCTGG-GATTGGGGGGGCAGAGGGGTGTGTGCACATGATGTGCGATGGGTGCGG
195 GGCATTGGGGTTC-GGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
18918785 GTACTTAGG-CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
259 GTACTT-GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * * *
18918849 GAGCATTTGAGATTTTACAGGTTTGCTACCAATAGTCATTAAAGTGTCTAAAATGGGGACACTTT
323 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* * *
18918914 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTATTTTGTGCATACCAAC
388 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
* **
18918979 AAAAATACAAGGATCACGTCTACCAGGTTTGGGGTAAAAACTCCTTCCGAAAAAATTTTAAAAAA
453 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
** * ** *
18919044 TCCCGAACCACAAAAGGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
518 TCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * **
18919109 TCACGTGCAGGCCTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAG
583 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAG
* * *
18919174 AAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCATGGCTTGTGCATCCCGTCTC
648 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * * *
18919239 TCTGGCCGGCATAGTGCCCGACCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGT
713 TCTGGCCGACGTAGT--------GCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * * *
18919304 TCAGTCCCAGTCTAAG-ATCAGACCGGA-TCGAGGGTTGCGACAGCAAGATCGGTAGCACGCAGA
770 TCATTCCCAGTCTAAGAATCGGACCGGACT-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA
* * * * *
18919367 GGGGGACCCGACCGATCCCTGGCTTACACATCCCACCCCTCTGGTCGGA-TGAGCGCCC
834 -GGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-C-GACTGAGCGCCC
* *
18919425 GCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C--AG--
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * *
18919484 -A----C---C---G----GACC-G---G-GGGTTCCGACAGTAAATGCTGGGCTCAGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * * ** * *
18919529 CTGGTG-TCGTATTTTTCTTCATTGGGGCACCATCGTCGGAGCATTGTCGGAGAACCTGACCGGC
131 CTGGTGCT-GCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGC
* ** * * *
18919593 GGCATTGGGGTTCTGACGATC-ACGGGGTCGGGGGGTATGCGCACATGATGTGCGATGGGTGCTG
195 GGCATTGGGGTTC-GGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
* * *
18919657 GTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAACCTCGAGAACTCAAACCCCCTTAAAA
259 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
*
18919722 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGAAATGGGGACACTTTT
324 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* *
18919787 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAACA
389 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
*
18919852 AAAATACAAGGATCACGTCTACCATGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
454 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * * * *
18919917 CCCGAACCGGAAAAAGTTTTGAAAATCATGAAAAATAGAAAATGGGTCATCTTGCCATGAAACTT
519 CCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * **
18919982 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAGAATGGCATTGGCACACAGA
584 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGA
* * *
18920047 AATATGAAGATGTGCCTGAAGCCTCCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
649 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * ** * *
18920112 TTGGCCGACGTAGTGCCCGCCTGCTCGTTTTGTTAGTTAGG-TTAGGCATATGGTGTTCATTCCC
714 CTGGCCGACGTAGTGCCCGCCTGCTCGTTTCGTCGGTT-GGCTTAGGCATACGGAGTTCATTCCC
* * * * * * * *
18920176 AGTCTAAG-TTCGGATCAGACTAAGGGTTGTGACAGCAGGATCGGCAGCACACAGAGGGCGACTC
778 AGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGG-GACCC
* * * ** * * *
18920240 GGCCAATCCCCGGCTTGCATATCCCGTCGCTTTGGTCGACTGAGCGCCC
842 GACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* * *
18920289 GCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACTGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * *
18920354 CATTCCCAGTCTAAGATCAGACCGGATCGAGGGTCGTGGCAGCACATGCTGGTCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * ** * * * * *
18920419 CTAGTGCTGTATTTTTCTTCACCGAGGCACGATCACCGGAGCATTGTCGGAGAACTTGACCGGCG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * *
18920484 ACATTGAGGTTTCGGCGATCGGGGGGGCCGGAGGGGGTGTGCACACATGATGTGCCATAGGTGCT
196 GCATTG-GGGTTCGGCGATCGGGGGGGCC-G-GGGGGTGTGCACACATGATGTGCGATGGGTGCT
* * *
18920549 CGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAATCCTCGAGAACTCACACCCCCTTAAA
258 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* ** *
18920614 GAGCATTTGACATTTTGTAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGAACACTTT
323 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* * *
18920679 TTTCAAATGATCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
388 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
* * * * * *
18920744 AAAAATACAAGGATAATGTTTGCCAAGTTTGGGGTCAAAACTCCTTCCCAAAAAATTTTAAAAAA
453 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * * *
18920809 TCCTGAGCCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAAGAAACT
518 TCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * * *
18920874 TCATGTGAAGGCTTCAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCTCATAG
583 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAG
* * * *
18920939 AAATATGAAGATGTGCCTAAACCCACCAACCAACCTATCGATCCATGGCTTGCGTATCCCGTCTC
648 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * *
18921004 TCTGGCCGACGTAGTGCCTGCCTGCCTATCCTCCCGCTTGTTTCGTCGATTGGCTTAGGCAGACG
713 TCTGGCCGACGTAGTG-C--CC-G-----CCT---GCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * ** * * *
18921069 AAGTTAATTCCCAGTCTAAG-ATCAAACTGGACTGAGGGTTGCGGTAGCAGGATCGGCAGCATGC
766 GAGTTCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGC
* ** * * * * *
18921133 AGAGGGGGACCCGATCGATTTCTGACTTGCTCATCCTGCCCCTCTGGCGGGCTGAGTGCCC
831 AGA-GGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGC-GACTGAGCGCCC
* * *
18921194 GGA-GCTCGTTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * *
18921258 CATTCCCAGTCTAAGATCAAACTGGACCGAGGGTTGCGACAGCACATACTGGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
** * *
18921323 CTGGTGCCACATTTTTCTTCGTCGGGGCACCAT---C---G--T---CGGAGAACCTAACCGACG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * *
18921377 GCATT-GGGTTCCGGCTATCGGGGGTGCCGGGGGCTGTGCACACATGATGTGCGATGGGTGCTGA
196 GCATTGGGGTT-CGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGG
* * *
18921441 TACTTGGCCCTTATATT-GCCCCCTATCTCTCATCAAACCTTGAGAACTCACACCCTCTTAAAGA
260 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
*
18921505 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATTGGGACACTTTTT
325 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
18921570 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
390 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * * * *
18921635 AAATAAAAGGATCACGTCTTCCAAGTTTGGGGCCAAAAATTCTTCCGAAAAAATTTAAAAAAATC
455 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * * * *
18921700 TCAAACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTTCCATTAAACTTC
520 CCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* *
18921765 ACATGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAA
585 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAA
* *
18921830 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCATCTCTC
650 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* ** * *
18921895 TGGTCGGTGTAGTGCCTGCTTGCTCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTC
715 TGGCCGACGTAGTGCCCGC---CT-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* ** *** * *
18921960 CCAGTTTAAG-ATTAGAATAGA-TGAAGGGCTGTGGCAGCAGGATCGGCAGCACGCAGAGGAGGA
776 CCAGTCTAAGAATCGGACCGGACTG-AGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGG-GGA
* *
18922023 CCCGACCGATCCCCGACTTGCGCATCCTGCCCCTCTGGCCAGCTGAGCGCCC
839 CCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCGA-CTGAGCGCCC
* *
18922075 GCACGCTCGTTTCGTGGCTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-CGGA--C
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
*** * * * * *** * * **
18922136 CGGACCGAGGGT-TATGGTAGT-AGGATCGGCAGCATGCAAAGGGGAACCCGATCGATCCCCGGC
66 CATTCCCA--GTCTA-AG-A-TCA-GACCGG-A-C---C-GA-GGG-TTGCGA-C-AGCACATGC
* * * * * * ** * *
18922199 TTGCGGATCCCGCCCTCTGGCCTGGTAAATGCCAGCACGCTCATT-TT-GTGGGGTGACTTAGGC
115 -TG-GGCT-CGGGCATGT-G-CTGG----TG-CTGCA---TTTTTCTTCGTCGGG-G-C--A-CC
* * *** * * * ***** *** ****
18922262 AT-A-TGGAATTCATTC-CCAGTCTAAGCAT-A-CGGAGTTCATTCCCAATCTAAGATCAGACCA
162 ATCACCGG-A-GCA-TCGCC-GGAGAA-CCTGACCGGCG-GCATTGGGGTTCGGCGATC-GGGGG
* * * * * * * * * * * *
18922322 GACTGAGGGTTGGGGCAGCACATGCTG-G-GCTCGG-GCAT-GTGCTGGTGCCGCATTTCTCTTC
220 GGCCGGGGGGT-GTGCA-CACATGATGTGCGATGGGTGC-TGGTACTTG-GCC-C--TTAT-AT-
* * ** * * * * ** * *** *
18922383 GTCGGGGCACC-ATCGCCGGAGC-ATCGCTGGAGAACCTGACTGACGGCATTGGGGTTCCGGCGA
276 -T--GGCCCCCTATC-CCTCATCAAAC-CTCGAGAA-CTCAC--ACCCCCTTAAAG----AGC-A
** ******** * * * * **** * *
18922446 TCAG-GGGGCGGGGGGTGTGCACGCCTGATATGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
328 TTTGAGATTTTACAGGTTTGC-TGCCAG-TA-GCCATTAAAG-T-GT-C-T-G-----AAATGGG
** * * ** * *** * * ** *
18922510 CCCCCTATCCTTCATCAAA-CCTCA-AGAA-CTCACACCCCCTTAAAGAGCATTTA--AG-ATTT
380 GACACT-T--TT-TTCAAATGGTCACAAAATCTTGTA--CACTT--CGAGTTTTTAGCTGAATTT
** * * * * ** *
18922569 TACAGGTTTGCTGCCAGTAGCC-ATTAAAGTGTCTGAAATGGGGA-CACTTTTTTCAA--AT-GG
437 T-----TTTG-TG-CA-T-GCCAAAAAAAAT-AC---AA---GGATCACGTCTACCAAGTTTGGG
* **
18922629 TCACAAAATCTTGTACACTT-CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACA
486 GC-CAAAA-C---T-C-CTTCCGA------A----AA---AATT-T---T----A-AAAAAT-C-
** * ** * * ** * *
18922693 AGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTTCGAAAAATTTTTAAAA--AATC-TCAA
520 CCGAAC-CG--TAAAAAGTTT--TG---AAAAT-C-GT-GAAAAA--TAGAAAACGAGTCGTC-T
** * * * *** * ** * * *
18922755 ACCGCA-AAAAGTTTCAAAAATGGTGAAAAATAGAAAACAAGTCGTC-TTGCCATGAAACTTCAC
571 TGC-CATGAAA-CTTC----A-CGTGAAGGCT---TAA-GGGAC--CATTG-TATG-AA-TTTAC
* * * * * ** * *
18922818 GTGAAGGCTTAAGGGACCATTCTACGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAAT
620 ---AAGCCATAA---A--A--AT-GGCATTGGC-A--CGTAGAAAT---A-T-G-A---AG--AT
* *** * * * * * * * * *
18922883 ATG---AAGATGTACCTA--AACCAACCTA-CCAC-CCTAT-C-AATCCACGGCTTGCCCAT-CC
660 GTGCCTAA-ACCCACCTACCACCCTATCGATCCACGGCT-TGCGCATCC-CGTC-T-CTC-TGGC
* ** ** * * ** * * * * *** * **
18922938 CGTC-TCTCTGGCGGGGCTAGTGCCCG-CCCGCCCGTCCGCCCGC-TCGTTTTGTC-G-GTTGGT
719 CGACGT-AGT-GC-CCGC--CTGCTCGTTTCGTCGGT-TG---GCTTAGGCAT-ACGGAGTTCAT
* * * * * * * * *
18922998 T--TAGTCATACGAAATTC-AATCCTAGTCT-A-AGAT-CAGACCAG-ATCGAGGGTTACGGCAA
774 TCCCAGTC-TAAG-AA-TCGGA-CC-GGACTGAGGGTTGC-G-GCAGCA--G---GAT-CGG---
* *
18923056 CAGGATCGCCAGAATGCAGAGGGGAACCC-AGTCGATCCCCGACTTGCGCATCCCGCCCCTCTGG
823 C---A--G-C---ACGCAGAGGGG-ACCCGA-CCGATCCCCGACTTGCGCATCCCGCCCCTCTGG
* *
18923120 CCGACTGAGTGTCC
877 -CGACTGAGCGCCC
* * * * *
18923134 GCACACTCGTTTCGTAGATTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACAGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * *
18923199 CATTCCCAGTCTAAGATCAGACTGGACTGAGGGTTGCAACAGTAGATGCTGGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * * * * **
18923264 CTGGTGCCGTATTTTTCTTCGTCGGGCCACCATCACCGGAGCATCACCGGAGAACCTAACCAACG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* * *
18923329 GCATTGGGGTTCTGGTGATCGGGGGGACCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
196 GCATTGGGGTTC-GGCGATCGGGGGGGCCG-GGGGGTGTGCACACATGATGTGCGATGGGTGCTG
* * *
18923394 GTACTTGGCGCTTATATTGGCCCCCTATCCCTCATCAAACGTTGAGAACTCACACCCCCTTAAAG
259 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* *
18923459 AGCATTTGAGACTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTT
324 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * **
18923524 TTCAAATTGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAAAGTTTTTGTGCATGCCAAAA
389 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * * * *
18923589 AAAATACAAGGATCATGTCTACCAGGTTTGCGGCCAAAACACCTTCCAAAAAAATTTTAAAAAAT
454 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
** * *
18923654 CTTGAACCGTAAAAAGTTTTGAAAATTGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTT
519 CCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * * * *
18923719 CACGTGAAGGCTTAAAGGACCATTGTATGAAATTAGAAGCCATAAAAATGGCATTGGCATGGAGA
584 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGA
* * * * * *
18923784 AATAAGAGGATGTGCCTAAACCCACCTTCAACCCTATCGATCCACGGCTTGTGCATCCCATCTCT
649 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * *
18923849 TTGACCGGCGTAGTGCCCACCCACCCGCCTGCCCGTTGGCTCGTTTCGTCGGTTAGCTTAGGCAT
714 CTGGCCGACGTAGTG----------C-CC-G-CC--T-GCTCGTTTCGTCGGTTGGCTTAGGCAT
* * * * * *
18923914 ACGGAGTTCATTCCCAGT-TAAG-ATTGAACCAGACCGAGGGTTGCGGTAGCAGGATCAGCAGCA
763 ACGGAGTTCATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCA
* * * * * *
18923977 TGCAGAGGGGGACTCGATCGATCCCTGGCTTACGCATCCCGCCCCTCTGGCCGACTGAGCGCCC
828 CGCAGA-GGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* * *
18924041 GCACGCTCATTTCGTGGGTTGACTTAGGCTTATGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * *
18924106 CATTCCCAGTCTAAGATCGGA-CGAGACCGAGGGTTGCGACAGCACATGCTAGGCTTGGGCATGT
66 CATTCCCAGTCTAAGATCAGACCG-GACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGT
* * * * *
18924170 ACTGGTG-TCGCATTTTTCTTCGTCGGGGCACCATCGCTGGAGCATCGTCGGAGAACCTGACCGA
130 GCTGGTGCT-GCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGG
* ** * * *
18924234 CGGCATTGGGGTTC--C-A-----GTGATCGGGGGTTATGCACACATGATGTGCGATGGGAGCTG
194 CGGCATTGGGGTTCGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTG
* * *
18924291 ATATTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAG
259 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
*
18924355 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGAGTCTGAAATGGGGACACTTTT
324 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * *
18924420 TTCAAATGGTCATAAAATCTTGAACACTTCTAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
389 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* **
18924485 AAAATACAAGCATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAAAT
454 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* ** **
18924550 CACGAACCGTAAAAAGTTTCAAAAATTTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
519 CCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* *
18924615 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGACATAAAAATGGCATTGGCATGTAGA
584 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGA
* *
18924680 AATATGAAGACGTGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
649 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* *
18924745 CTGGCCGACGTAGTGCCCGCCCGCCCGCCCGGTCGCTCATTTCGTCGGTTGCCTTAGGCATACGG
714 CTGGCCGACGTAGT--------GCCCG-CC--T-GCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * * * * *
18924810 AGTTCATTCCCAGTCTAAGATTC-GACCGGA-TCGAGGGTTACAGCAGCAGGATCAGTAGCACGT
767 AGTTCATTCCCAGTCTAAGAATCGGACCGGACT-GAGGGTTGCGGCAGCAGGATCGGCAGCACGC
** * * ** *
18924873 AGAAGGGGACCCGATTGATCCGCGACTTGCGCATCCTGCCCCTCTGGTCGGTTGAGCACCC
831 AG-AGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* * * * *
18924934 GCACGCTCGTTTCATGGGTTAACTTAGGCATACAGAGTTCATTTCCAGTCTAAGCATACGAAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * *
18924999 CATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* * * *** * * *
18925064 TTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTTGGAGCATCGCCAGAGAATCAGACCGGCG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* * * *
18925129 GCATTGGGGTTCCGGCGATCGAGGGGGCTGGGGGGTGTGCGCACATGATGTGCAATGGGTGCT-G
196 GCATTGGGGTT-CGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGG
18925193 TCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
260 T-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * * * *
18925258 AGCATTTGGGATTTTATAGGTTTGTTGCCAGTAGCCATTAACGTGTCTAAAATGGGGACACTTTT
324 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
** * * * *
18925323 TT-AAATCATCACAAAATCTTGTACACTTCGAG-TTTTAGCTAAATTTTTTTTTGCGTGCCAACA
389 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * *
18925386 AAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAATTCCTTCCAAAAAAATTTTAAAAAAT
454 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
** * * * * *
18925451 CCCGAACCACAAAATGTTTCGAAAATGGTGAAAAATAGAAAATGAGTCATCTTGCCATGAAACTT
519 CCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
*
18925516 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGA
584 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGA
* *
18925581 AATATGAAGATGTGCCTAAACCCACCTTCCACCCTATCGATCCACGGCTTGCGCATCTCGTCTCT
649 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * *
18925646 CTGGCCGGCATAGTGCTGACCCACCCGTCCGCTCGTTTCGTCAGTTGGCTTAGTCACACGGAGTT
714 CTGGCCGACGTA--G-TG-CCC-GCC-T--GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* * * * ** * * * *
18925711 CATTCCCAATCTAAG-ATTGGACCGGACTAATGGTTTTGGCAGTAGGATTGACAGCACGTAGAGG
771 CATTCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-G
* * ** * * *
18925775 GGGACCCGACCGATCCTCGGCTTGTACATCCCGCCCCTCTGGCCGGCTGAGAGCCT
835 GGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGCGCCC
* * *
18925831 GCACGTTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTACCAATCTAAGCATACGGAGTT
1 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * * **
18925896 CATTCCTAGTCGAAGATCAAATCGGACCAAGGGTTACGGTAGCACATGCTGGGCTCGGGCATGTG
66 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
* ** * * * *
18925961 TTGGTGCCACATTTTTCTTCATCGGGGCACCATCATCGGAGCATTGCCGGAGAACTTGACCGGCG
131 CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
* *** *
18926026 GCATTGGGGTTCCGACGATC-GAAAGGCCGGGAGGGGTGTGCGCACATGATGTGCGATGGGTGCT
196 GCATTGGGGTT-CGGCGATCGGGGGGGCC-GG-GGGGTGTGCACACATGATGTGCGATGGGTGCT
** **
18926090 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTCGAACTCACACCCAGTTAAA
258 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * *
18926155 GAGAATTTGAGATTCTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTT
323 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
18926220 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
388 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
* * * *
18926285 AAAAATACAAGGATCACG--TA--TAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAA
453 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * * * *
18926346 TCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCAATGAAATT
518 TCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * *
18926411 TCACGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAAACGGCATTGGCACGCAG
583 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAG
* * *
18926476 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCATGCACATCCCGTCTC
648 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* *
18926541 TCTGGCCGACATAGTGCCCGCCTGCCCGCTCTTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
713 TCTGGCCGACGTAGTGCCCGCCT----GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * *
18926606 T-CCAGTCTAAG-ATCGGATCGGACTGAGGGTTGCGGTAGCAGGATCGACAACATGCAAAGGGGG
774 TCCCAGTCTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA-GGGG
* * * *
18926669 ACCTGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
838 ACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGG-CGACTGAGC
18926718 ATGTGCTAGA
Statistics
Matches: 12657, Mismatches: 1959, Indels: 1401
0.79 0.12 0.09
Matches are distributed among these distances:
861 59 0.00
862 89 0.01
863 178 0.01
864 282 0.02
865 322 0.03
866 9 0.00
867 4 0.00
868 5 0.00
870 3 0.00
871 5 0.00
872 499 0.04
873 13 0.00
874 28 0.00
875 3 0.00
876 202 0.02
877 267 0.02
878 72 0.01
879 23 0.00
880 44 0.00
881 156 0.01
882 68 0.01
883 173 0.01
884 64 0.01
885 15 0.00
886 13 0.00
887 675 0.05
888 395 0.03
889 436 0.03
890 533 0.04
891 233 0.02
892 648 0.05
893 1052 0.08
894 59 0.00
895 56 0.00
896 794 0.06
897 403 0.03
898 735 0.06
899 132 0.01
900 51 0.00
901 360 0.03
902 492 0.04
903 168 0.01
904 254 0.02
905 289 0.02
906 343 0.03
907 389 0.03
908 12 0.00
909 115 0.01
910 140 0.01
911 269 0.02
912 28 0.00
913 2 0.00
914 6 0.00
915 4 0.00
916 13 0.00
917 9 0.00
918 5 0.00
919 10 0.00
920 21 0.00
921 18 0.00
922 6 0.00
923 17 0.00
924 9 0.00
925 14 0.00
926 11 0.00
927 12 0.00
928 4 0.00
929 14 0.00
930 14 0.00
931 5 0.00
933 5 0.00
934 7 0.00
937 11 0.00
938 9 0.00
939 6 0.00
940 8 0.00
941 4 0.00
942 4 0.00
943 1 0.00
944 1 0.00
945 7 0.00
946 1 0.00
949 5 0.00
950 14 0.00
951 17 0.00
952 11 0.00
953 10 0.00
954 10 0.00
955 7 0.00
957 5 0.00
958 2 0.00
959 10 0.00
960 6 0.00
961 5 0.00
962 3 0.00
963 4 0.00
964 14 0.00
965 1 0.00
966 9 0.00
967 3 0.00
968 1 0.00
969 4 0.00
970 3 0.00
972 1 0.00
973 2 0.00
975 1 0.00
976 2 0.00
979 2 0.00
980 1 0.00
982 2 0.00
983 1 0.00
985 3 0.00
986 3 0.00
988 3 0.00
989 6 0.00
990 2 0.00
991 14 0.00
992 3 0.00
993 2 0.00
994 6 0.00
995 6 0.00
996 10 0.00
997 2 0.00
998 4 0.00
1000 7 0.00
1001 10 0.00
1002 11 0.00
1003 9 0.00
1004 17 0.00
1005 13 0.00
1006 5 0.00
1009 1 0.00
1010 6 0.00
1011 1 0.00
1012 1 0.00
1013 4 0.00
1014 3 0.00
1015 8 0.00
1016 6 0.00
1017 9 0.00
1018 13 0.00
1021 7 0.00
1022 6 0.00
1024 214 0.02
1025 274 0.02
1026 295 0.02
1027 245 0.02
1028 203 0.02
1029 223 0.02
1030 292 0.02
1031 171 0.01
1032 226 0.02
1033 170 0.01
1034 144 0.01
1035 98 0.01
1036 135 0.01
1037 129 0.01
1038 259 0.02
1039 139 0.01
1040 183 0.01
1041 170 0.01
1042 130 0.01
1043 110 0.01
1044 95 0.01
1045 97 0.01
1046 93 0.01
1047 282 0.02
1048 286 0.02
1049 52 0.00
1050 53 0.00
1051 79 0.01
1052 56 0.00
1053 202 0.02
1054 52 0.00
1055 57 0.00
1056 37 0.00
1057 28 0.00
1058 35 0.00
1059 135 0.01
1060 170 0.01
1061 48 0.00
1062 52 0.00
1063 31 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (889 bp):
GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTG
CTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGCG
GCATTGGGGTTCGGCGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGT
ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAA
AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
CGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAA
TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
GGCCGACGTAGTGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
CTAAGAATCGGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGACCCGACC
GATCCCCGACTTGCGCATCCCGCCCCTCTGGCGACTGAGCGCCC
Found at i:18921257 original size:26 final size:26
Alignment explanation
Indices: 18921220--18921272 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18921210 TTTGACTTAG
*
18921220 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
18921246 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
18921272 G
1 G
18921273 ATCAAACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:18922282 original size:158 final size:159
Alignment explanation
Indices: 18921998--18922286 Score: 393
Period size: 158 Copynumber: 1.8 Consensus size: 159
18921988 CTGTGGCAGC
* *
18921998 AGGATCGGCAGCACGCAGAGGAGGACCCGACCGATCCCCGACTTGCGCATCCTGCCCCTCTGGCC
1 AGGATCGGCAGCACGCAAAGGAGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC
* * * * * *
18922063 AGCTGAGCGCCCGCACGCTCGTTTCGTGGCTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
66 AGCTAAACGCCAGCACGCTCATTTCGTGGCGTGACTTAGGCATACGGAATTCATTCCCAGTCTAA
18922128 GATCGGACCGGACCGAGGGTTATGGTAGT
131 GATCGGACCGGACCGAGGGTTATGGTAGT
* * * *
18922157 AGGATCGGCAGCATGCAAAGG-GGAACCCGATCGATCCCCGGCTTGCGGATCCCG-CCCTCTGGC
1 AGGATCGGCAGCACGCAAAGGAGG-ACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGC
* * * * * *
18922220 CTGGTAAATGCCAGCACGCTCATTTTGTGGGGTGACTTAGGCATATGGAATTCATTCCCAGTCTA
65 CAGCTAAACGCCAGCACGCTCATTTCGTGGCGTGACTTAGGCATACGGAATTCATTCCCAGTCTA
18922285 AG
130 AG
18922287 CATACGGAGT
Statistics
Matches: 111, Mismatches: 18, Indels: 3
0.84 0.14 0.02
Matches are distributed among these distances:
158 66 0.59
159 45 0.41
ACGTcount: A:0.20, C:0.30, G:0.29, T:0.21
Consensus pattern (159 bp):
AGGATCGGCAGCACGCAAAGGAGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC
AGCTAAACGCCAGCACGCTCATTTCGTGGCGTGACTTAGGCATACGGAATTCATTCCCAGTCTAA
GATCGGACCGGACCGAGGGTTATGGTAGT
Found at i:18922299 original size:26 final size:26
Alignment explanation
Indices: 18922260--18922312 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18922250 GGTGACTTAG
* *
18922260 GCATATGGAATTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCAATCTAA
*
18922286 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAATTCATTCCCAATCTAA
18922312 G
1 G
18922313 ATCAGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGGAATTCATTCCCAATCTAA
Found at i:18923198 original size:26 final size:26
Alignment explanation
Indices: 18923161--18923213 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
18923151 ATTGACTTAG
18923161 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
18923187 GCATAC-AGAGTTCATTCCCAGTCTAA
1 GCATACGA-AGTTCATTCCCAGTCTAA
18923213 G
1 G
18923214 ATCAGACTGG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 1 0.04
26 25 0.96
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:18924991 original size:26 final size:26
Alignment explanation
Indices: 18924961--18925013 Score: 74
Period size: 26 Copynumber: 2.0 Consensus size: 26
18924951 GTTAACTTAG
18924961 GCATAC-AGAGTTCATTTCC-AGTCTAA
1 GCATACGA-AGTTCA-TTCCTAGTCTAA
18924987 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
18925013 G
1 G
18925014 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 0, Indels: 4
0.86 0.00 0.14
Matches are distributed among these distances:
25 4 0.16
26 20 0.80
27 1 0.04
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCTAGTCTAA
Found at i:18925525 original size:901 final size:902
Alignment explanation
Indices: 18922078--18926716 Score: 6007
Period size: 896 Copynumber: 5.2 Consensus size: 902
18922068 AGCGCCCGCA
*
18922078 CGCTCGTTTCGT-GGCTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGA-TCGGACCGGAC
1 CGCTCGTTTCGTCGG-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTC-GACCGGAC
* * * * *
18922141 CGAGGGTTATGGTAGTAGGATCGGCAGCATGCA-AAGGGGAACCCGATCGATCCCCGGCTTGCGG
64 CGAGGGTTACGGCAGCAGGATCAGCAGCATGCAGAAGGGG-ACCCGATCGATCCCCGGCTTGCGC
* * * * * *
18922205 ATCCCG-CCCTCTGGCCTGG-T-AAATGCCAGCACGCTCATTTTGTGGGGTGACTTAGGCATATG
128 ATCCCGCCCCTCTGGCC-GGCTGAGA--CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACG
* * *
18922267 GAATTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCAGACCAGACTGAGGGT
190 GAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGT
* *
18922332 TGGGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTCTCTTCGTCGGGGCACCATC
255 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC
* *
18922397 GCCGGAGCATCGCTGGAGAACCTGACTGACGGCATTGGGGTTCCGGCGATC-AGGGGGC-GGGGG
320 GCCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGAGGGGGCTGGGGG
* * * * *
18922460 GTGTGCACGCCTGATATGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCAT
385 GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
* *
18922525 CAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGC
450 CAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGC
18922590 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
515 CATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTT
*
18922655 TTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
580 TTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
* * * * *
18922720 AAAAATCCTTTCGAAAAATTTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATGGTGAAAAA
645 AAAAATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATGGTGAAAAA
* * *
18922785 TAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTACGAATTTA
710 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
18922850 CAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTACCTAAACCAACCTACCACCCT
775 CAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * **
18922915 ATCAATCCACGGCTTGCCCATCCCGTCTCTCTGG-CGGGGCTAGTGCCCGCCCGCCCGTCCGCC
840 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCG-TAGTGCCCGCCCGCCCGCCCGGT
* * * * * * * * *
18922978 CGCTCGTTTTGTCGGTTGGTTTAGTCATACGAAATTCAATCCTAGTCTAAGA-TCAGACCAGATC
1 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTC-GACCGGACC
* * *
18923042 GAGGGTTACGGCAACAGGATC-GCCAGAATGCAG-AGGGGAACCC-AGTCGATCCCCGACTTGCG
65 GAGGGTTACGGCAGCAGGATCAG-CAGCATGCAGAAGGGG-ACCCGA-TCGATCCCCGGCTTGCG
* ** * * * *
18923104 CATCCCGCCCCTCTGGCCGACTGAGTGTCCGCACACTCGTTTCGTAGATTGACTTAGGCATACGA
127 CATCCCGCCCCTCTGGCCGGCTGAG-ACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGG
* ** *
18923169 AGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGGTT
191 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
** * * * * *
18923234 GCAACAGTAGATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGCCACCATCA
256 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
* * * * * *
18923299 CCGGAGCATCACCGGAGAACCTAACCAACGGCATTGGGGTTCTGGTGATCG-GGGGGACCGAGGG
321 CCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGAGGGGG-CTG-GGG
*
18923363 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCGCTTATATTGGCCCCCTATCCCTCA
384 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA
* * *
18923428 TCAAACGTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGACTTTACAGGTTTGCTGCCAGTAG
449 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
* * *
18923493 CCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTGGAGT
514 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
** * * *
18923558 TTTTAGCTGAAAGTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAGGTTTGCGGC
579 TTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* ** * * *
18923623 CAAAACA-CCTTCCAAAAAAATTTTAAAAAATCTTGAACCGTAAAAAGTTTTGAAAATTGTGAAA
644 CAAAA-ATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATGGTGAAA
* * *
18923687 AATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAAAT
708 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
* * * * * * *
18923752 TAGAAGCCATAAAAATGGCATTGGCATGGAGAAATAAGAGGATGTGCCTAAACCCACCTTCAACC
773 TACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * * *
18923817 CTATCGATCCACGGCTTGTGCATCCCATCTCTTTGACCGGCGTAGTGCCCACCCACCCGCCTGCC
838 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG----CCCGCCCGCCCGCC
*
18923882 CGTT
899 CGGT
* * *
18923886 GGCTCGTTTCGTCGGTTAGCTTAGGCATACGGAGTTCATTCCCAGT-TAAGATT-GAACCAGACC
1 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTCG-ACCGGACC
* * * * * *
18923949 GAGGGTTGCGGTAGCAGGATCAGCAGCATGCAGAGGGGGACTCGATCGATCCCTGGCTTACGCAT
65 GAGGGTTACGGCAGCAGGATCAGCAGCATGCAGAAGGGGACCCGATCGATCCCCGGCTTGCGCAT
* * * * *
18924014 CCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCTTATGGAGT
130 CCCGCCCCTCTGGCCGGCTGAG-ACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
18924079 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACGAGACCGAGGGTTGCG
194 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG
* * * * * *
18924144 ACAGCACATGCTAGGCTTGGGCATGTACTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCTG
259 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * *
18924209 GAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCAGTGATC--GGGGG-T------TAT
324 GAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGAGGGGGCTGGGGGGTGT
* * * * *
18924265 GCACACATGATGTGCGATGGGAGCTGATATTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAA
389 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
18924330 CCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
454 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * * *
18924394 AAAGAGTCTGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGAACACTTCTAGTTTTTA
519 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
18924459 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGCATCACGTCTACCAAGTTTGGGGCCAAAA
584 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* ** * * * **
18924524 CTCCTTTTGAAAAAATTTTAAAAAATCACGAACCGTAAAAAGTTTCAAAAATTTTGAAAAATAGA
649 ATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATGGTGAAAAATAGA
18924589 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
714 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * * * *
18924654 ACATAAAAATGGCATTGGCATGTAGAAATATGAAGACGTGCCTAAGCCCACCTACCACCCTATCG
779 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
*
18924719 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGGT
844 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGGT
* * *
18924778 CGCTCATTTCGTCGGTTGCCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTCGACCGGATCG
1 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTCGACCGGACCG
* * * * * * *
18924843 AGGGTTACAGCAGCAGGATCAGTAGCACGTAGAAGGGGACCCGATTGATCCGCGACTTGCGCATC
66 AGGGTTACGGCAGCAGGATCAGCAGCATGCAGAAGGGGACCCGATCGATCCCCGGCTTGCGCATC
* * * * * *
18924908 CTGCCCCTCTGGTCGGTTGAGCACCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACAGAGTT
131 CCGCCCCTCTGGCCGGCTGAG-ACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * *
18924973 CATTTCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGG
195 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGG
* * **
18925038 CAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTTGG
260 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
* * * *
18925103 AGCATCGCCAGAGAATCAGACCGGCGGCATTGGGGTTCCGGCGATCGAGGGGGCTGGGGGGTGTG
325 AGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGAGGGGGCTGGGGGGTGTG
*
18925168 CGCACATGATGTGCAATGGGTGCT-GTCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
390 CGCACATGATGTGCGATGGGTGCTGGT-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * *
18925232 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGGGATTTTATAGGTTTGTTGCCAGTAGCCATT
454 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * **
18925297 AACGTGTCTAAAATGGGGACACTTTTTT-AAATCATCACAAAATCTTGTACACTTCGAG-TTTTA
519 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * * *
18925360 GCTAAATTTTTTTTTGCGTGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAA
584 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * *
18925425 TTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCACAAAATGTTTCGAAAATGGTGAAAAATAGA
649 ATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATGGTGAAAAATAGA
* *
18925490 AAATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
714 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
** *
18925555 CCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTTCCACCCTATCG
779 CCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * *
18925620 ATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGGCATAGTG-CTG---ACCCACCC-GT
844 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGGT
* * * * * *
18925674 CCGCTCGTTTCGTCAGTTGGCTTAGTCACACGGAGTTCATTCCCAATCTAAGATTGGACCGGACT
1 -CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTCGACCGGACC
* * ** * * * * * * * **
18925739 AATGGTTTTGGCAGTAGGAT-TGACAGCACGTAGAGGGGGACCCGACCGATCCTCGGCTTGTACA
65 GAGGGTTACGGCAGCAGGATCAG-CAGCATGCAGAAGGGGACCCGATCGATCCCCGGCTTGCGCA
* *
18925803 TCCCGCCCCTCTGGCCGGCTGAGAGCCTGCACGTTCGTTTCGTGGGTTGACTTAGGCATACGGAG
129 TCCCGCCCCTCTGGCCGGCTGAGA-CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAG
* * * * * * * * *
18925868 TTCATTACCAATCTAAGCATACGGAGTTCATTCCTAGTCGAAGATCAAATCGGACCAAGGGTTAC
193 TTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC
* * * * **
18925933 GGTAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCACATTTTTCTTCATCGGGGCACCATCATC
258 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * ** * *
18925998 GGAGCATTGCCGGAGAACTTGACCGGCGGCATTGGGGTTCCGACGATCGAAAGGCCGGGAGGGGT
323 GGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGAGGGGGCTGG-GGGGT
18926063 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
387 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
** ** * *
18926128 AACCTCTCGAACTCACACCCAGTTAAAGAGAATTTGAGATTCTACAGGTTTGCTGCCAGTAGCCA
452 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
18926193 TTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
517 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
*
18926258 TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACG--TA--TAGTTTGGGGCCAA
582 TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * *
18926319 AAATCCTTTCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATA
647 AAATCCTTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATGGTGAAAAATA
* * * *
18926384 GAAAATGAGTCGTCTTGCAATGAAATTTCACGTGAAGGCTTAAGGGACCATTGTATAAATTTACA
712 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
*
18926449 AGCCATAAAAACGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
777 AGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * * *
18926514 CGATCCACAGCATGCACATCCCGTCTCTCTGGCCGACATAGTGCCCGCCTGCCCG--C--T
842 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGGT
* *
18926571 --CT--TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT-CCAGTCTAAGA-TCGGATCGGACT
1 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTC-GACCGGACC
* * * * **
18926630 GAGGGTTGCGGTAGCAGGATC-GACAACATGCA-AAGGGGGACCTGGCCGATCCCCGGCTTGCGC
65 GAGGGTTACGGCAGCAGGATCAG-CAGCATGCAGAA-GGGGACCCGATCGATCCCCGGCTTGCGC
18926693 ATCCCGCCCCTCTGGCCGGCTGAG
128 ATCCCGCCCCTCTGGCCGGCTGAG
18926717 CATGTGCTAG
Statistics
Matches: 3256, Mismatches: 432, Indels: 111
0.86 0.11 0.03
Matches are distributed among these distances:
890 2 0.00
891 87 0.03
892 88 0.03
893 277 0.09
894 3 0.00
895 5 0.00
896 610 0.19
897 403 0.12
898 152 0.05
899 32 0.01
900 156 0.05
901 484 0.15
902 101 0.03
903 72 0.02
904 446 0.14
905 5 0.00
906 6 0.00
907 270 0.08
908 57 0.02
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (902 bp):
CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTCGACCGGACCG
AGGGTTACGGCAGCAGGATCAGCAGCATGCAGAAGGGGACCCGATCGATCCCCGGCTTGCGCATC
CCGCCCCTCTGGCCGGCTGAGACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGC
AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
GCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGAGGGGGCTGGGGGGTGTGC
GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
TCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAT
CCTTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATGGTGAAAAATAGAAA
ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
ATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
CCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGGT
Found at i:18927523 original size:26 final size:26
Alignment explanation
Indices: 18927493--18927545 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18927483 GTTGACTTAG
*
18927493 GCATACGAAGTTCATCCCCAGTCTAA
1 GCATACGAAGTTAATCCCCAGTCTAA
* *
18927519 GCATACGGAGTTAATTCCCAGTCTAA
1 GCATACGAAGTTAATCCCCAGTCTAA
18927545 G
1 G
18927546 ATTGGACCGA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.26, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACGAAGTTAATCCCCAGTCTAA
Found at i:18928437 original size:26 final size:26
Alignment explanation
Indices: 18928397--18928463 Score: 107
Period size: 26 Copynumber: 2.6 Consensus size: 26
18928387 ACTTATACGA
*
18928397 AGTTCATTCCTAGTCTAAGCATATGG
1 AGTTCATTCCCAGTCTAAGCATATGG
*
18928423 AGTTCATTCCCAGTCTAAGCTTATGG
1 AGTTCATTCCCAGTCTAAGCATATGG
*
18928449 AGTTAATTCCCAGTC
1 AGTTCATTCCCAGTC
18928464 AAAGATCAGA
Statistics
Matches: 38, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 38 1.00
ACGTcount: A:0.25, C:0.22, G:0.18, T:0.34
Consensus pattern (26 bp):
AGTTCATTCCCAGTCTAAGCATATGG
Found at i:18929667 original size:905 final size:901
Alignment explanation
Indices: 18926799--18930113 Score: 4197
Period size: 902 Copynumber: 3.6 Consensus size: 901
18926789 CATTTGAACG
*
18926799 CATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
1 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
* * *
18926864 AGAACTCACACTCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGT
66 AGAACTCACACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAGT
* *
18926929 GTCTAAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGA
131 GTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * *
18926994 ATTTTTTTGTGCATGCCAAGAAAAATAAAAGGATCATGCCTACCAAGTTTGGGGCTGAAAATCCT
196 AATTTTTTGTGCATGCCAAGAAAAATAAAAGGATCACGCCTACCAAGTTTGGGGCCGAAAATCCT
*
18927059 TTCGAAAAAATTTTAAAAAATTCTGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAGACG
261 TTCGAAAAAATTTTAAAAAATT-TGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACG
*
18927124 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATA
325 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
*
18927189 AAAAT-GCATTGGCATGTAGAAATATGAAGATGGTGCCTAAACCCACCTACCACCCTATCGATCC
390 AAAATGGCATTGGCATGCAGAAATATGAAGAT-GTGCCTAAACCCACCTACCACCCTATCGATCC
* * * * * * *
18927253 ACAGCTTACGCATCC-CTCTCTCTGGTCGATGTAGTGCCCGCCTGCCCGCCCGCCCGCCCGCTCG
454 ACGGCTTACACATCCTGTCTCTCTGGCCGACGTAGTG--C-CC-ACCCGCCCGTCCGCCCGCTCG
* *
18927317 TTTCGTCTG-TT-GCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATCGGACCGAACCAAGGGT
515 TTTCGTC-GATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGT
* * ** *
18927380 TGTGGAAGCAAGATCAGCAGCACACAGAGGGGGACCCGGCCGATCCCTGGCTTGCGCATCCTACC
579 TGTGGCAGCAAGATCGGCAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCC-GCC
* ** * * * * *
18927445 CCTCTGGCCGACTGAGCGCTCGTACGCTTGTTTCATGGGTTGACTTAGGCATACGAAGTTCATCC
643 CCTCT-GTCGGTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTC
* *** * *
18927510 CCAGTCTAAGCATACGGAGTTAATTCCCAGTCTAAGATTGGACC-GA--GAGGGTTGCGGCAGCA
707 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGATCAATGGTTGCGGCAGCA
* *
18927572 CATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCG-TCGGGGCACCATCACCGGAGCA
772 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGATCGGGGCACCATCGCCGGAGCA
* * *
18927636 TCACCGGAGAACCTGACCGACGGCATTGGGGTTCCGATGATC-GGGGGAGCCGGGGGGTGTGCGC
837 TCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGA-CCGGGGGGTGTGCGC
18927700 A
901 A
* * * **
18927701 CATGATGTGCGATGGGTGCTGGTACTTGGCTCTTATATTGGTCCCCTATCCCTCATTAAACCTCA
1 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
* *
18927766 AAAACTCACACCCCCTTAAAGAGCATTT-AGGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAG
66 AGAACTCACACACCCTTAAAGAGCATTTGA-GATTTTACAGGTTTGCTGCCAGTAGCCACTAAAG
18927830 TGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
130 TGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* * * *
18927895 AGATGTTTTGTGCATGCCAAGAAAAATAAAAGGATCATGCCTACCAAGTTTGGGGCTGAAAATCC
195 AAATTTTTTGTGCATGCCAAGAAAAATAAAAGGATCACGCCTACCAAGTTTGGGGCCGAAAATCC
* ** *
18927960 TTTCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAGAC
260 TTTCGAAAAAATTTTAAAAAAT-TTGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAAC
*
18928025 GGGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
324 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
*
18928090 AAAAATGGCATTGGCATGCAGAAATATGAAGATTTGCCTAAACCCACCTACCACCCTATCGATCC
389 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * * * *
18928155 ACGGCTTGCACATCCCGACTCTCTGGCCGGCGTA----CTACCCGCCCGTCCGCCCGCTCGTTCC
454 ACGGCTTACACATCCTGTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGTCCGCCCGCTCGTTTC
* ** * * **
18928216 GTCGATTGGCTTAGGGATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTACGG
519 GTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGTGG
* ** * *
18928281 CAGCAAGATAGGCAGCACACAGAGCTGGACCCGGTCGATCCCCAGCTTGCGCTTCCCGCCCCTCT
584 CAGCAAGATCGGCAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCAT-CCGCCCCTCT
** *** *
18928346 CGTCGGTTGATAGCCCGCACG-TACGTTTCGTGGGTTGACTTACTTATACGAAGTTCATTCCTAG
648 -GTCGGTTGAGCGCCCGCACGCT-CGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAG
* *
18928410 TCTAAGCATATGGAGTTCATTCCCAGTCTAAGCTTATGGAGTTAATTCCCAGTCAAAGATCAGAT
711 TCTAAGCATACGGAGTTCATTCCCAGTCTAAG---AT-CA---AA----C---C--AGATCA-A-
* * * * *
18928475 TGGACCGAGGGTTGCTGCAGCACATGCT-AGTTCGGGCATGTGTTGGTGCCGCATTTTTC-TCCA
758 T--------GGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGA
* * * * *
18928538 TCGAGGCACCATCGCCAGAGCATTGCCGGAGAACCTGACTGGTGGCATTGGGGTTCC-AGCGATC
815 TCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGA-CGATC
*
18928602 GACGGGG-CCGGGGGGGGTGTGCGCA
879 G-GGGGGACC--GGGGGGTGTGCGCA
* * *
18928627 CATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCACTATCCCTCATCAAACC-TC
1 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
* *
18928691 ACGAACTCACACACCCTTAAAGACCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCACTAAAG
66 A-GAACTCACACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAG
* * *
18928756 TGTCTGAAATGGGGACACTTTTTTCAAATGGGCACAAAATCTTGTACACTTTGAGTTTTTAGCTG
130 TGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
** * * * *
18928821 ATTTTTTTTGTGCATACCAAGAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCCAAAACTC
195 AAATTTTTTGTGCATGCCAAGAAAAATAAAAGGATCACGCCTACCAAGTTTGGGGCCGAAAA-TC
* * ** * *
18928885 GTTTTGAAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAAAAAA
259 CTTTCGAAAAAATTTTAAAAAAT-TTGAACCGCAAAAAGTTTTGAAAATCGTGAAAAAT-AGAAA
* * *
18928950 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTGAAGGCACCATTGTATGAATTTACAAGTC
322 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * * *
18929015 ATAAAAAGGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACACACCTACCATCCTATCGAT
387 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * * * **
18929080 CCACGGCTTGCAGATCCTGTCTCTCTAGCTGACGTAGTGCCCACCCGCCCGTCTGCCCGTTTATT
452 CCACGGCTTACACATCCTGTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGTCCGCCCGCTCGTT
* * * *
18929145 TCATCCG-TTGGCTTAGGCATACAAAGTTCATTCCCAGTCTAAGATCAGACCTGACCAAGGGTTG
517 TCGT-CGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTG
* *
18929209 TGGCAG-AAGGATCGGCAGCACATAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCTCGCCC
581 TGGCAGCAA-GATCGGCAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATC-CGCCC
* * * **
18929273 CTCTGATCGGTTGAGCGCCCGCACGCTCGTTTTGTGGGTTCACTTAGGCATATGGTGTTCATTCC
644 CTCTG-TCGGTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCC
* * *
18929338 CAGTCTAAGCACACAGAGTTCATTCCCAGTCTAAGATCAAACCAGATCAATGGTTACGGCAGCAC
708 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGATCAATGGTTGCGGCAGCAC
* *
18929403 ATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTTGAT-GGGGCACCATCGCCGGAGCAT
773 ATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGATCGGGGCACCATCGCCGGAGCAT
* * * *
18929467 CGTCGGAGAACTTGACCGGCGACATTGTGGTTCCGACGATCGGGGGGACCGGGGTGGTGTGCGCA
838 CGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGACCGGGG-GGTGTGCGCA
* *
18929532 CATGATGTGCGATGGGTGCCGGTACGTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
1 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
* * *
18929597 AGAACTCACAC-CCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCTGTAGCCATTAAAA
66 AGAACTCACACACC-CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAG
* * * *
18929661 TGTCTGAAATGGGGACACTTCTTTCAAATGGTCACAAAATCATGTACACTTCGAGTTCTTAGCTG
130 TGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
** * * ** *
18929726 AAATTTTTTACGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGG-CTAAAA-CT
195 AAATTTTTTGTGCATGCCAAGAAAAATAAAAGGATCACGCCTACCAAGTTTGGGGCCGAAAATC-
* * *
18929789 CTTTCTGAAAAAAATTTAAAAAATTTCGAACCGCAAAAAGTTTTGAAACTCATGAAAAATAGAAA
259 CTTTC-GAAAAAATTTTAAAAAATTT-GAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAA
* *
18929854 ACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAACC
322 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* ** *
18929919 ATAAAAATGGCAATGGCACT-CAGAAATATGAAGATGTGCCTAAACCCACCTATTATCCTATCGA
387 ATAAAAATGGCATTGGCA-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
* * * * *
18929983 TCCATGGCTTACACAT-CTCGTCTCTTTGGCCGGCGTAGTGCCCGCCC-CCCGTCCGTCCGCTCG
451 TCCACGGCTTACACATCCT-GTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGTCCGCCCGCTCG
* * *
18930046 TTTCGTCGATTGGCTTAGGCATACGGAGTTCCTTCCCAGTCTAAGATCGGACCGGACCGAGGGTT
515 TTTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTT
18930111 GTG
580 GTG
18930114 ACAATATGAT
Statistics
Matches: 2085, Mismatches: 258, Indels: 139
0.84 0.10 0.06
Matches are distributed among these distances:
894 1 0.00
895 28 0.01
896 178 0.09
897 2 0.00
899 2 0.00
901 1 0.00
902 417 0.20
903 111 0.05
904 167 0.08
905 300 0.14
906 86 0.04
907 5 0.00
910 1 0.00
913 3 0.00
914 1 0.00
915 6 0.00
916 1 0.00
917 1 0.00
920 1 0.00
923 3 0.00
924 84 0.04
925 27 0.01
926 291 0.14
927 156 0.07
928 2 0.00
930 4 0.00
931 203 0.10
932 3 0.00
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (901 bp):
CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTG
AGAACTCACACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTAAAGT
GTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
AATTTTTTGTGCATGCCAAGAAAAATAAAAGGATCACGCCTACCAAGTTTGGGGCCGAAAATCCT
TTCGAAAAAATTTTAAAAAATTTGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGA
GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
GGCTTACACATCCTGTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGTCCGCCCGCTCGTTTCGT
CGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGTGGCA
GCAAGATCGGCAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCGCCCCTCTGTC
GGTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
GCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGATCAATGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGATCGGGGCACCATCGCCGGAGCATCGCCGGAG
AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGACCGGGGGGTGTGCGCA
Found at i:18930721 original size:629 final size:630
Alignment explanation
Indices: 18929515--18930739 Score: 1857
Period size: 629 Copynumber: 1.9 Consensus size: 630
18929505 ATCGGGGGGA
*
18929515 CCGGGGTGGTGTGCGCACATGATGTGCGATGGGTGCCGGTACGTGGCCCTTATATTGGCCCCCTA
1 CCGGGGTGGTGTGCGCACATCATGTGCGATGGGTGCCGGTACGTGGCCCTTATATTGGCCCCCTA
** *
18929580 TCCCTCATCAAACCTTGAGAACTCACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
66 TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * **
18929645 CCTGTAGCCATTAAAATGTCTGAAATGGGGACACTTCTTTCAAATGGTCACAAAATCATGTACAC
131 CCAGTAGCAATTAAAACATCTGAAATGGGGACACTTCTTTCAAATGGTCACAAAATCATGTACAC
* *
18929710 TTCGAGTTCTTAGCTGAAATTTTTTACGCATGCCAACAAAAATACAAGGATCACATCTACCAAGT
196 CTCGAGTTCTTAGCTGAAATTTTTTACGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGT
* * ** *
18929775 TTGGGGCTAAAACTCTTTCTGAAAAAAATTTAAAAAATTTCGAACCGCAAAAAGTTTTGAAACTC
261 TTGGGGCCAAAAATCTTTCTGAAAAAAATTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATC
18929840 ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
326 ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * * *
18929905 TGAATTTACAAACCATAAAAATGGCAATGGCACTCAGAAATATGAAGATGTGCCTAAACCCACCT
391 TGAATTTACAAACCATAAAAATGGCAATGCCACGCAAAAATATGAAGATATGCCTAAACCCACCT
** * * * * * *
18929970 ATTATCCTATCGATCCATGGCTTACACATCTCGTCTCTTTGGCCGGCGTAGTGCCCGCCCCCCGT
456 ACCATCCTAACGATCCACGGCTTACACATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCCCCGC
* * * *
18930035 CCGTCCGCTCGTTTCGTCGATTGGCTTAGGCATACGGAGTTCCTTCCCAGTCTAAGATCGGACCG
521 CCGTCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAGACCG
18930100 GACCGAGGGTTGTGACAATATGATCAGTAGCACGAAGAGGGGAGG
586 GACCGAGGGTTGTGACAATATGATCAGTAGCACGAAGAGGGGAGG
* *
18930145 CCGGGG-GGTGTGCGCACATCATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
1 CCGGGGTGGTGTGCGCACATCATGTGCGATGGGTGCCGGTACGTGGCCCTTATATTGGCCCCCTA
18930209 TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
66 TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * *
18930274 CCAGTAGCAATTAAAGCATCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
131 CCAGTAGCAATTAAAACATCTGAAATGGGGACACTTCTTTCAAATGGTCACAAAATCATGTACAC
* * ** * *
18930339 CTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCTCATCTACCAGGT
196 CTCGAGTTCTTAGCTGAAATTTTTTACGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGT
* *
18930404 TTGGGGCCAAAAATCCTTTC-GAAAAAATTTTAAAAAATCCCGAACCTCAAAAAGTTTTGAAAAT
261 TTGGGGCCAAAAAT-CTTTCTGAAAAAAATTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAAT
* * * *
18930468 CATGAAAAATAGAAAACGAGTCGTCTTGCCATTAAACTTCTCGTGAAGGCTTAAGGGACGATTGT
325 CATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
** *
18930533 ATGAATTTACAGGCCATAAAAATGGCATTGCCACGCAAAAATATGAAGATATGCCTAAACCCACC
390 ATGAATTTACAAACCATAAAAATGGCAATGCCACGCAAAAATATGAAGATATGCCTAAACCCACC
* **
18930598 TACCATCC-AACGATCCACGGCTTGCGTATCCCATCTCTCTGGCCGGCGTAGTGCTCAC-CCCCC
455 TACCATCCTAACGATCCACGGCTTACACATCCCATCTCTCTGGCCGGCGTAGTGC-C-CGCCCCC
* **
18930661 CGCCCGTCTGCTCATTTCGTC-AGTTGGCTTAGGCATACGGAGTTCATTCGTAGACTAAGATCAG
518 CGCCCGTCCGCTCATTTCGTCGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAG
*
18930725 ACCGGATCGAGGGTT
582 ACCGGACCGAGGGTT
18930740 TCAGCAGTAG
Statistics
Matches: 533, Mismatches: 58, Indels: 9
0.89 0.10 0.01
Matches are distributed among these distances:
628 39 0.07
629 482 0.90
630 12 0.02
ACGTcount: A:0.29, C:0.24, G:0.21, T:0.26
Consensus pattern (630 bp):
CCGGGGTGGTGTGCGCACATCATGTGCGATGGGTGCCGGTACGTGGCCCTTATATTGGCCCCCTA
TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
CCAGTAGCAATTAAAACATCTGAAATGGGGACACTTCTTTCAAATGGTCACAAAATCATGTACAC
CTCGAGTTCTTAGCTGAAATTTTTTACGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGT
TTGGGGCCAAAAATCTTTCTGAAAAAAATTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATC
ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
TGAATTTACAAACCATAAAAATGGCAATGCCACGCAAAAATATGAAGATATGCCTAAACCCACCT
ACCATCCTAACGATCCACGGCTTACACATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCCCCGC
CCGTCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGACTAAGATCAGACCG
GACCGAGGGTTGTGACAATATGATCAGTAGCACGAAGAGGGGAGG
Found at i:18930899 original size:26 final size:26
Alignment explanation
Indices: 18930852--18930902 Score: 66
Period size: 26 Copynumber: 2.0 Consensus size: 26
18930842 GTTGACATAG
* *
18930852 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
* *
18930878 GCATATGGAGTTCATTAGCAGTCTA
1 GCATACGGAGTTCATTACCAGTCTA
18930903 TGATCAAATC
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.27, C:0.20, G:0.22, T:0.31
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:18935448 original size:13 final size:12
Alignment explanation
Indices: 18935419--18935448 Score: 51
Period size: 12 Copynumber: 2.4 Consensus size: 12
18935409 TTTTTGTGCT
18935419 TGCCAACAAAAA
1 TGCCAACAAAAA
18935431 TGCCAACAAAAA
1 TGCCAACAAAAA
18935443 TAGCCA
1 T-GCCA
18935449 TTGTATGAAT
Statistics
Matches: 17, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
12 13 0.76
13 4 0.24
ACGTcount: A:0.53, C:0.27, G:0.10, T:0.10
Consensus pattern (12 bp):
TGCCAACAAAAA
Found at i:18935813 original size:26 final size:26
Alignment explanation
Indices: 18935777--18935828 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
18935767 GTTGACTTAG
18935777 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18935803 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18935829 TATCGGACCA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.27, G:0.19, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:18937585 original size:26 final size:26
Alignment explanation
Indices: 18937549--18937601 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18937539 GTTGACTTAG
*
18937549 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
*
18937575 GCATATGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
18937601 G
1 G
18937602 ATCGGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:18938485 original size:26 final size:26
Alignment explanation
Indices: 18938449--18938499 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
18938439 TGACTTAGGT
18938449 ATACGGAGTTCATTCCCAGTCTAAGC
1 ATACGGAGTTCATTCCCAGTCTAAGC
*
18938475 ATACGGAGTTCATTCCCAGTGTAAG
1 ATACGGAGTTCATTCCCAGTCTAAG
18938500 ATCAGACCGG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.24, G:0.22, T:0.27
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAGTCTAAGC
Found at i:18938556 original size:898 final size:897
Alignment explanation
Indices: 18935446--18953593 Score: 23412
Period size: 898 Copynumber: 20.4 Consensus size: 897
18935436 ACAAAAATAG
*
18935446 CCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* *
18935511 A-CCACCTA-CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTAGCCGGCATAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* **
18935574 CCCGCCCGCTCCGCTTGCCCGCTCATTTGGTTAGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
131 CCCGCCCGC-CCGC-T---CG----TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
** * * ** *
18935639 CTAAGATTGGACC-GAATCAAGGGTTGTGGCAGCAGGATCGATAGCATGCAGAGGGGGACCCGAC
187 CTAAGATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-C
* * * *
18935703 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTTGAGCACCCGTAAGCTTGTTTCGTGGG
250 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC-TGAGCGCCCGCACGCTCGTTTCGTGGG
*
18935768 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAATATC
314 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
** * * * *
18935833 GGACCAAACCTAGGGTTATGGCAGCACATGCTCGGCTCGGGCATGTGCTGGTGCCGTATTTTTCT
379 GGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
** * **
18935898 TCGTCGGGGCACCATCGTTGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCAACGA
444 TCACCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGA
* * *
18935963 TCGGGCGGGCCGAGGGGGGTGTTCGCACAGGATGTGCGATGGGTGCTGGTACTTGGCTCTTATAT
509 TCGGG-GGGCC--GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* * *
18936028 TGGCCCCCTATCCCTCATCAAACCTTGAGAACTCGCACCCCCTTAAAGAGCATTTGAGATTTGAC
571 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
*
18936093 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-ATTTTCAAATGGTCACAAAA
636 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * *
18936157 TCTTGTACACTTCGAGCTTTTAGCAGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCACG
701 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACG
18936222 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTCGAACCGTAAAAAG
766 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC-CGAACCGTAAAAAG
*
18936287 TTTCAAAAATCGTGAAAAATAGAAAACGACTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
830 TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
18936352 GGA
895 GGA
*
18936355 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGCCATGCAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
*
18936420 ACCCACCTACCACCCCATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT-----
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * * *
18936480 ---GCCCGACCACTTGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATTA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * ** * ** * *
18936542 TATCGGATCAAGGGTTGCAGCAGCAGGATCAGCAGCACGTGGAGGGGGA-CCGATCGATCCCCAG
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCGG
* * * *
18936606 CCTGTGCATCCCGCCCCTTTGGCCGGCTGAGCGCCTGCACGCTCGTTTCGTGGGTTGACTTAGGC
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* * * * * *
18936671 ATATGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAATCTAAGATCCGACTGGACCG
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * **
18936736 AGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCA
390 AGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCA
** * * *
18936801 CCA---T-----CA-C--CGGAGAACCTGACCGGTGGCATTGGTGTTCTGGCAATCGGGAGGGTC
455 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGG-GGG-C
* * * * *
18936855 GGGGGGGTGTGCGCAGATGATGTGCAATGGGCGTTGGTACTTGGCCCTTATATTGGCCCCCTATC
518 CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
* * * *
18936920 CCTCATCAAACCTTGATAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGC
583 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
* *
18936985 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGCCAAAAAATCTTGTACACTT
648 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* *
18937050 CGAGTTTTTAGCTGAATTTTTTTGTGCATACCAAAAAAAATACAAGGATCATGTCTACCAAGTTT
713 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * * * *
18937115 GGGGCCAAAATTCCTT-TGAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATTGT
778 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGT
* *
18937179 GAAAAATAAAAAACGAGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAAGGGA
843 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* *
18937234 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGA------T--
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * ** * *
18937291 ACCCACCTACCACCCTATTGATCCACGGCTTGCACATCCCGTCTCTCTGGTCGATGTAGCGCCCA
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* ** * * * *
18937356 CCTGCCCGTGCACTCGTTTCGTCGGTTGGCTTAGGCATACCGAGTTCATTCCCAATCTAAGATTA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
** ** * * * ** * *
18937421 GACCAGATGGAGGGTTACGACAGAAGGATCAGCAGCACGCAGAGGTTGACCTGGCCGATCCTCGG
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACC-CGCCGATCCCCGG
* * * *
18937486 CTTGTGCATCCCGCACCTCTGGCCGGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* * * *
18937551 ATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTATAAGATCGGACTGGATCG
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * *
18937616 AGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTACTGGTGCCGCATTTTTCTTCACCGGGGCA
390 AGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCA
* * *
18937681 CCATCGTCAGAGCATCGTCGGA-AACCTGACCGACGGCATTAGGGTTCCGACGATCGGGGGGCCG
455 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGCCG
* * ** *
18937745 AGGGGTGTGCGCACATGATGTGCGATGGGTTCTGGTACTTCACCCTTATATTGGCCCCCTATCCT
520 GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
* * *
18937810 TCATCAAACCTCGAGCACTCACACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGTTGCCAG
585 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
* * * *
18937875 TAGCCATTAAAATGTTTGAAATGGGGACACTTTTTTGAAATGGTTACAAAATCTTGTACACTTCG
650 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG
* *
18937940 AGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAGGGATCACGTCTACCAAGTTTGG
715 AGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGG
* * *
18938005 GGCCAAAACTCCTTTCAAAAAAATTTTAAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTG
780 GGCCAAAACTCCTTCCGAAAAAATTTT-AAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTG
* * *
18938070 AAAAATTGAAAACGAGTCGTTTTGCCATGAAACTTAACGTGAAGGCTTAAGGGA
844 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* *
18938124 CCATTCTATGAATTTACAAGCCATAAAAATGCCATTGGCATGCAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18938189 ACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGACAGCGTATTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
*
18938254 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
** * * * * ** * *
18938319 GACCAGATTGAGGGTTGCGGTAGCAAGATCGGTAGCACATAGAAGGGGACCCAGCCGATCCCCAG
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATCCCCGG
** * * ** *
18938384 CTTGCGCATCCTACCCCTCTGGCCGGCTGAGCGCCCGCACACTCGTTTTGTTAGTTGACTTAGGT
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* *
18938449 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACCGGACCG
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
** * * * *
18938514 AGGGTTGTGACAGCACATGCTGGGCTTGAGCATGTGCTGGTGCCACATTTTTC-T----------
390 AGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCA
* ** *
18938568 ---TCGTCGGAGCATTG-CTGGAGAACCTGATTGACGGCATTGGGGTTTCGGCGATCGGGGGCGT
455 CCATCGTCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGG-G-
* * *
18938629 CGGGGGGGGGGTGGGCGCACATGATGTGCGATGGGTGCTTGTACTTGGCCCTTATATTGGCCCCC
517 C---CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* *
18938694 TATCCTTCATCAAATCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
579 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* * * *
18938759 TGCCAATAGGCATTAAAATTTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
644 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * *
18938824 ACTTTGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAA
709 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAA
* * * * *
18938889 GTTTGGGGCTAAAACTCCTTCCGAAAAAATTTTAAAAAGTCCTGAACCATAAAAAGTTTTAAAAA
774 GTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAA
*
18938954 TCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
839 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
*
18939013 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18939078 ACCCACCTATCGCCCTATCGATCCATGGCTTGCACATCCCGTCTCTCTGGCCGGC-TAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * *
18939142 CACGCCCGTCCACTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * ***
18939207 GACC-GAACCAAGGGTTGTGGCAGCAGGATCAGCAGCATTTAGAGGGGGACCCGACCGATCCCCG
196 GACCAG-ACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCG
** *
18939271 GCTTGCGCATTGCGCCCCTCTAGCCGGCTGAGCGCCCGCACG--C---TC----G-T---TT---
259 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
* *
18939320 CAT--GG-GTTGA----C--T-TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACC
324 CATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* * ** * * *
18939375 GAGGGTTGCGGCAGCACATGCTGGGCTTGGTAATGTGCTGGTGCCACATTTCTCTTCGCCGGGGC
389 GAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGC
* * * * *
18939440 ACCATCGCCGAAGCATCGTCGGAGAACCTGACCGACGGCACTGGGGTTCCGGTGATCTAGGGGGC
454 ACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC-GGGGGGC
* * *
18939505 CGGGGGGGTGTGCGCACATAATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTAT
518 C-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* * * *
18939570 CCCTCATCAAACCTAC-AGAGCTCACAGCCCCTTAAAGAGCAATTGAGATTTTACAGGTTTGTTG
582 CCCTCATCAAACCT-CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * *
18939634 CCAGTAACAATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACAC
646 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
*
18939699 TAT-GAGTTTTCAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAG
711 T-TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAG
* * **
18939763 TTTGGGGCTAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTGAAAAT
775 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
*
18939828 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGA
840 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
*** *
18939886 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATATGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18939951 ACCCACCTACCGCCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCTGGTGTAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* *
18940016 CACGCCCGCCCGCTCGTTTCGACGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * * *
18940081 GATCGGACTGAGGGTTGTGGCAGCAGGATCAGTAGCATGTAGAGGGGGACCCGACCGATCCCCGG
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCGG
* * *
18940146 CTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAAGC
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* * * *
18940211 ATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGATCG
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * * * * **
18940276 AGGGTTGCGGTAGCAAATGTTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCA
390 AGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * * * *
18940341 CCATC-TCCGAAGCATCGTCGGAGAACCTGACCGGCGACATTGGGGTTCCGGTGATCTAGGGGCC
455 CCATCGT-CGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC-GGGGGGC
* * * * * *
18940405 CGGGGGGGGTGTGCACACATAATGTGCAATGGGTGCTAGTACTTGGCCCTTATATTAGTCCCCTA
518 C--GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* *
18940470 TCCCTCATCAAACCTCCAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTG
581 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * * *
18940535 CCAGTAGCAATTAAAGTATGTGAAATGGGGACACTTTTTTCAAATGGTCACAAATTCTTGTACAC
646 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * *
18940600 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATAATGTCTACCAGGT
711 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
*
18940665 TTGGGGCCAAAACTCCTTTCGAAAAAATTTT---AAA-----AA--GT------TTT-AAAAATC
776 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
* *
18940713 ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
841 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * * *
18940770 CCATTGTATGAATTTACAAGCCATAAAAATGGAACTGGCATGTAGAAATATGAATATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18940835 ACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCATCTCTCTAGCCGACGTAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * *
18940900 CCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGAGCA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * * *
18940965 GATC-GACCCAAGGGTTGCGGTAGCAAGATCGGCAGCACGCAAAGGGGGACCCGGTCGATCCCCG
196 GACCAGA-CCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATCCCCG
* * * * *
18941029 ACTTGCGCATTCC-CCCCTCTGGCCGGCTGAACGCCCGCACGCTTG-TTCGTGGGTTGACTTAGC
259 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
** * *
18941092 CATATAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACA
324 CATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* * *
18941157 GAGGGTTACAGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGC
389 GAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGC
* ** * * *
18941222 ACCATCGCCGGAGCATCACCGGAGAACCTAACCGACGGCATTGGGGTTCCAGCGATTAGGGGGGC
454 ACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGA-TCGGGGGGC
* ** *
18941287 CAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTCATACTTGGCCCTTATATTGGCCCCTTATC
518 CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
*
18941352 CCTCAACAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
583 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
* * *
18941417 AGTAGCGATTAAAGTGTCTGAAATGGGGGCACTTTTTTCAAATTGTCACAAAATCTTGTACACTT
648 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
** * *
18941482 TAAGTTTTTAGCTGAATTTTTTTTTGCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTT
713 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * * *
18941547 GGGGCCAAAATTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCGCAGAAAGTTTCAAAAATCGT
778 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGT
18941612 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
843 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* *
18941667 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTACGTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18941732 ACCCACCTACCACCCTATCGATCCACGGCTTCCGCATCCCGTCTCTCTGGTCGACGTAATGACCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-
* *
18941797 CCTGCCTGCCCG-CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGCCTAAG
128 CC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * *
18941861 ATCAGACCCA-ACCGAGGGTTGTGGCAGCAGGATTGGCAACACGCAGAGGGGGACCGGTCGATCC
192 ATCAGA-CCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGCCGATCC
* * * * * *
18941925 TCGGGTTGCGCATCCTGCCCCTCTGGCCGGTTGAGCGCCCGCACGCTCATTTCATGGGTTGACTT
256 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
* * * *
18941990 AGGCATACGGAGTTCATTCCCAGTCTAAGCAAATGGAGTTCATTCCCAGTCTAAGATCAGACCAG
321 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG
* * * * **
18942055 ACCGAGGTTTACGACAGCACATGCTGGGTTCGAGCATGTGCTGGTGCCGCATTTTTCTTCTTCGG
386 ACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGG
* * * * * * *
18942120 GGCACCATCGCCGGAGCATCATCGGAGAACCTGACCGGCAGCATTGGGGTTCCGACAATCGAAGG
451 GGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCG-GGG
*
18942185 GGCTAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
515 GGC-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* *
18942250 TATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGC
579 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* *
18942315 TGCCAGTAGGCATTAAAGTGTCTGAAATGGGGGCACTTTTTTCAAATGGTCACAAAATCTTGTAC
644 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
18942380 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAA
709 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAA
* * * *
18942445 GTATGGGTCCAAAACTCCTTCCGAAAAAA-TTTAAAAAATCCC-AGACCGCAAAAAGTTTCCAAA
774 GTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGA-ACCGTAAAAAGTTTCAAAA
* *
18942508 ATCGTGAAAAATAAAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
838 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * * * *
18942568 CCATTATATGAATTTACAAGCCATAAAAATGGAATTGCCATGCACAAATATGAAGATGTGGCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * *
18942633 ACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCATCTCTCTGGCCAGCGTAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * * *
18942698 CCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCCGTCGAAGATCT
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * * * *
18942763 GACCGGACTGAGGGTTGGGGCAGCAGGATTGGCAGCATGCAGAAGGGGACCCGGCGATCCCCGAC
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGCCGATCCCCGGC
* * * **
18942828 TTGCGCATCCCGCCCCTCTAGCCGGCTGAACGCCCGTACGCTCGTTTCGTGGGTTGACTTAGTTA
261 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
* *
18942893 TACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCGAGTCTAAGATTGGACCGGACCGA
326 TACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGA
18942958 GGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCAC
391 GGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCAC
* * *
18943023 CATCG-CTGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGATTTCGGCGATCGGGGGGGTC
456 CATCGTC-GGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC-GGGGGG-C
* * * * *
18943087 GGGGGGGTCTGCACACATAATGTGCGATGGCTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
518 CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
* * *
18943152 ACTCATTAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCT
583 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
* *
18943217 AGTAGCCATTAAAGTGTCTGAAATGGGG-CACATTTTTCAAATGGTCCCAAAATCTTGTACACTT
648 AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
*
18943281 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AACAAAATACAAGGATCACGTCTACCAAGTTT
713 CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT
* * * * * * * *
18943345 GGGGCCAAAAATCCTTCCCAAAAAATTTTTAAAAATCTCGAACGGCAAAAAGTTTAAAAAATCAT
778 GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGT
*
18943410 GAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
843 GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
18943465 CCATTGTATGAATTTACAAGCCATAACAATGGCATTGGCATGCAAAAATATAAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18943530 ACCC-CCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGGTCGACGTAGTGCCCA
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* ** * *
18943594 CCCGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGTGTACGAAGTTCATTCCCAGTGTAAGATCA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* ** ** * ** * *
18943659 GACCAAACTAAGGGTTACGGTAGCAGGATCGAAAACATGCAGAGGGGGACCCGACCGATCCCCGG
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCGG
* * * *
18943724 CTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCTGTACGCTCGTTTCGTGGGTTGACTTAAGC
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
18943789 ATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C--AGATC-GA--GG--C-
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * *
18943832 ----TTATGGCAGCACAT-TTAGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGA-CGGGG
390 AGGGTTACGGCAGCACATGCT-GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-ACCGGGG
* * * *
18943891 TACCATCGTCGGAGCATCGTCGGAAGAACCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGGG
453 CACCATCGTCGGAGCATCGTCGG-AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGG
18943956 ACCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
517 -CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
18944021 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA-GTTTGCTG
581 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* *
18944085 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGATCACCAAATCTTGTACAC
646 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * *
18944150 TTCGAGTTTCTAGCTGAATTTTTTTGTTCATGCCAATAAAAATACAAGGATCACGTCTACCAAGT
711 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
* * *
18944215 TTGGGGCCAAAACTCGTTCCGAAAAAATTTTAAAAAATCCCGAATCATAAAAAGTTTCAAAAATC
776 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
* * * * *
18944280 GTGAAAAATAAAAAATGAGTCATCTTGCCATGAAAGTTCAGGTGAAGGCTTAAGGGA
841 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
18944337 CCATTGTATGAATTTACAAGTCATAAAAATGGCATTGGCACGCAAAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
*
18944402 ACCCACCTA-CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGT----G
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * ** **
18944462 CCTGCCCACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACAAAGTTCATTCGTAGTCTAAGATCA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * * * * **
18944527 GACCGGACTGAGGGTTGTTGTAGCAAGATTGGCAGCACGC-GAAGCGGGACCCGATCGATCCCTT
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAG-AGGGGGACCCG-CCGATCCCCG
* * * * * * *
18944591 GATTGCGCATCCCACCCCTCTGGCCAGTTGAGCGGCCGCACGCTCATTTCGTGGGTTGACATAGG
259 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGG
* * * *
18944656 CATACGGAGCTCATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGAACC
324 CATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
* *** *
18944721 AAGGGTTGTAGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGC
389 GAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGC
* * * *
18944786 ACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCAGCATTGGGGTTCCGACGATCGGGGGGCC
454 ACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGCC
*
18944851 GGGGGGTGTGCGCACATCATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
519 GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
* *
18944916 GTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCA
584 CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
* *
18944981 GTAGCAATTAAAGTGTCTGAAATGGGG-GACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
649 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
*
18945045 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTG
714 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTG
* * * * * *
18945110 GGGCCAAAAATCCTTCCCAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATG
779 GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTG
* **
18945175 AAAAATAGAAAATGAGTCGTCTTGCCACAAAACTTCACGTGAAGGCTTAAGGGA
844 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
*
18945229 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * * * *
18945294 ACCCAGCTACCACCCTATCGATTCATGGCTTGCGCTTCCCGTCTCTCTGGTCGGTGTAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-
* *
18945359 GCCGTTCTCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCCAAG
130 GCC---CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * **
18945424 ATCAGACC-GAACTGGGGGTTGTGGCAGCAGGATTGGCAGCATGCAGAGGGGGACCCGGTTGATC
192 ATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATC
* * ** * * * *
18945488 CTCGGCTTGCGCATCCTGCCTTTCTGGCCAGCTGAGCGCCTGTACGCTCGTTTCGTGGGTTGAAT
255 CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
* * **
18945553 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGACTA
320 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG
** * * * * *
18945618 GACCGAGACTTACGACAGTACATTCAGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGA-C
385 GACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-ACC
* * * *
18945682 GAGGTACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGG
449 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC-GG
18945747 GGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
513 GGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
18945812 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGGTT
577 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC-AGGTT
* *
18945877 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGAGGACACTTTTTTCAAATGGTCACCAAATCTTG
641 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * *
18945942 TACACTTCGAGTTTCTAGCTGAATTTTTTTGTTCATGCCAATAAAAATACAAGGATCACGTCTAC
706 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTAC
* * *
18946007 CAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAATCATAAAAAGTTTCAA
771 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAA
* * *
18946072 AAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAGGGGA
836 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
***
18946134 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
*
18946199 ACCCACCTACCACCCAATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-
* * *
18946264 CACGCCCGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAG
128 C-CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * *
18946329 ATCAGACC-GAACTGAGGGTTGTGGCAGCAGGATCGGCAGCATGCAGAGAGGGACCCGGTCGATC
192 ATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATC
* * ** * *
18946393 CTCGGCTTGCACATCCTACCCTTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACT
255 CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
18946458 TAGGCATACGGAGTTCATTCCCAGTCTAAG-ATA---AG---A-T--C-G-----GAT-------
320 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG
* * * * * **
18946500 ---CGAGGGTTGCAGCAACACATACTGGGCTCGGGCATGTGCTGGTGCCGAATTTTTCTTTCGTC
385 GACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC-TTCACC
* * * **
18946562 GGGGCACCATTGCCGGAGCATCGTCGGAGAACCTGAACGGGGGCATTGGGGTTCCGGCGATCGGG
449 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC-GG
18946627 GGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
513 GGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* *
18946692 CCTATCCCTCATCAAACCTCGAGAACTCATACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTT
577 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
*
18946757 GCTTG-CAGTAGCCATTAAAGTATCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
642 GC-TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * * *
18946821 TCCACTTCGAGTTTTTAGGTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTGC
706 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTAC
* ** * **
18946886 CATGTTTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAAATCTCGAACCAAAAAAAGTTTCAA
771 CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAA
* *
18946951 AAATCGTAAAAAATCGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
836 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
18947013 CCATTATCTGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * * * * *
18947078 ACCCACCTATCACCCTATCGATTCACTGCTTGCGCATCTCGTCTTTCTGGTCGGCATAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * * * *
18947143 CCCGCCCGCCCGCCCGCTTCTTTTGTCGGTTGGCTTAGGCATACAGAGTTAATTACCAGTATAAG
131 CCCGCCCGCCCGCTCG----TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * *
18947208 ATCGGATCAGACCGAGGGTTATGGCAGCAGGATTGACAGCACGTAGAGGGGGACCCGACCGATCC
192 ATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCC
* * *
18947273 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCGCCCGCACGCTCGTTTCTTGGGTTAACTT
256 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
* *** * *
18947338 AGGCATACGGAGCTCATTTGTAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAG
321 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG
* * * * * *
18947403 ACCGAGGGTTGCGGTAGCACATGCTAGGCTCGAGCATGTGCTGCTGCCGCATTTTTCTTCGCCGG
386 ACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGG
* * * *
18947468 GG---CA----C----CATCGTCGGAGAACCTGATCGGCGGCATTGGGGTTCCGACGATGGCGGG
451 GGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCG-GGG
* *
18947522 GGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAGATTGGCCCCCT
515 GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
*
18947587 ATCCCTCATCAAACCTCGAGAACTCACACCACCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
580 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* *
18947652 GCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACCAAATCTTGTACA
645 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * * *
18947717 CTTTGGGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACAAAG
710 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAG
* * * *
18947782 TTTGGTGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCAAACCATAAAAAGTTTCAAAAAT
775 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
** * * *
18947847 TATGAAAAATAGAAACCGAGTCGTCTTACCGTGAAACTTCACGTGAAGGCTTAAGGGA
840 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
18947905 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * * * *
18947970 ACCAACCGAGCACCCTATCGATCTA-TGCTTGCGCATCCCGTCTCTTTGGCCGGCGTAGT----G
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * * * ** **
18948030 CCCGTCCGCCCGCTCGTGTCGTTGTTTGGCTTAGGCATATGGAGTTCATTCATAGTCTAAGATTG
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * *
18948095 GACTAGACCGAGTGTTGCGGCAGCAGGAT---CAACACACAGAGGGGGACCCGGGCGATCCCCGG
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATCCCCGG
* * * *
18948157 CTTACGCATCCCGCCCCTCTGGCTGGCTTAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAGGC
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* * * * * *
18948222 ATACGGAGTGCATTCCTAGTCTAAGCATATGAAGTTCATT-CCAGCCTAAGATCGGACCAGACCG
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
* * * * * *
18948286 AGGGTTACGGTAGCACATGCTGGGCTCGGGCATGTGTTGGTGTCGTAATTTTCTTCGCCGGGGCA
390 AGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * * *
18948351 CCATCGCCAGAGCGTC-ACTGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGTGGC
455 CCATCGTCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGG-GGC
18948415 CGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
518 CG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
*
18948480 CCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
582 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* * * *
18948545 CAGTAGCCATTTAAGTGTCTGAAATAGGGATACATTTTTCAAATGGTCACAAAATCTTGTACACT
647 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * * * ** *
18948610 TCGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAACAAAAAATACAATGACCAAGTCTATGAACT
712 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAAATACAAGGATCACGTCTACCAAGT
* * **
18948675 TTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAAACACAAAAAGTTTCAAAAATC
776 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
*
18948740 GTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
841 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* *
18948797 CCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCATGCAGAAATATGAAGATGTACCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
*
18948862 ACCCACCTACCACCGTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
** *
18948927 TCCATCCGCCCGCCCGCTAATTTCGTCGGTTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAG
131 --C--CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
** * * * * * * * * * *
18948992 ATTGGACCGGATCGAGGATTATGGTAGCAAGATCAGTAGCATGCAGAGGGGGACCCGGTCGATCC
192 ATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATCC
* * * * * * *
18949057 CCGACTTGCGCATCCCGTCCCACAGGCCGGTTGAGCACCCGTACGCTCGTTTCGTGGGTTGACTT
256 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
* * *
18949122 AGGCATACGGAGTTCATTCCCAGTCTATGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGG
321 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG
* * * **
18949187 ACCGAGGGTTACGGCAGCACATGCTGGGCTTGGGCATGTGCTGGTGCTGTATTTTTCTTCGTCGG
386 ACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGG
** * * *
18949252 GGCACCATCACCGGAGCATCGTCGGAGAACTTGACCGACGGCATTAGGGTTCCGACGATCGGGGG
451 GGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGG
*
18949317 GCCGAGGGGTGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
516 GCCG-GGGG-GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* * *
18949382 TATCCCTCATGAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGC
579 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* *
18949447 TGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTCTAC
644 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * * * *
18949512 ACTTCGAGTTTATAGCTGAATTTTTTTGTGCATGCCAACAAAAATGCAAGGATCATGTCTACGAA
709 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAA
* ** *
18949577 GTTTGGGGCCAAAA-TGCCCTCCGAAAAAATTTTAAAAAATCCTAAACTGTAAAAAGTTTCAAAA
774 GTTTGGGGCCAAAACT-CCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAA
* * * * *
18949641 ATCATGAAAGATAGAAAATGAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTGAGGGA
838 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
**
18949701 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * *
18949766 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGGCGGTGTAGT----G
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * * * * * * **
18949827 CCCGCCCGTCTGCTTGTTTCGTCAGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCCAAGATTG
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
** * * * *
18949892 GACCAGACCGAGGGTTGCAGCAGTAGGATCGACAGCACACAGAGGGGGACCCGACCGATCCCCGA
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCGG
* * * *
18949957 CTTGTGCATCCCGCCCCTCTGGCTGGCTGAGCGCCCGTATGCTCGTTTCGTGGGTTGAC-T----
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
*
18950017 -TA--G-G--CA-T---A---T--G----C--AGTTCATTCCCAGTCTAAGATCGGACCGAACCG
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG
** * **
18950061 AGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGG--
390 AGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCA
* * * *
18950124 -CA----C----CATCGTCGGAGAACCTAACCGACGGCATTGGGGTTCTGGCAATCGGAGGCGTC
455 CCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGG-GG-GGC
* ** * * *
18950180 AGGGGGGGTGTGCGCACATGATGTTTGACGGGTGCTGGTTCTTGGCCCTTATAGTGGCCCCCTAT
518 -CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* ** * * *
18950245 CCCTCATCAAATCTTAAGAACTCATACCCCCTTAAAGAGCATTTCAGATTTTATAGGTTTGCTGC
582 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
*
18950310 CAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA--
647 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
***
18950373 -C---TTTTTAGCTGAATTTTTTTAG-GCAAAACAAAAAAAATACAAGGATCACGTCTACCCAA-
712 TCGAGTTTTTAGCTGAATTTTTTT-GTGCATGCCAAAAAAAATACAAGGATCACGTCTA-CCAAG
* **
18950432 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTGAAAAT
775 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
* *
18950497 CATGGAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
840 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
18950555 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATCTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * * *
18950620 ACCCACCTATCACCCTATCGATCCACAGCTTGTGCATCTCGTCTCTCTGGCCGGTGTAGTGCCTG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-C--
* *
18950685 GCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAT
128 -CCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * *** * *
18950750 ATCAGACCGGACCCAGGGTTGCAACAGCAGGATCGGTAGCACGTAGAGGGGGACCCGACCGATCC
192 ATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCC
* ** * *
18950815 CCGGCTTGCGTATCCCTTCCCTCTGGCCGGCTTAGCGCCC-CTACGCTCGTTTCATGGGTTGACT
256 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGC-ACGCTCGTTTCGTGGGTTGACT
* *
18950879 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATGCGGAGTTCATTCCCAGTATAAGATCGGA-CG
320 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG
* * *
18950943 TGACCGAAGGTTAAGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
385 -GACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACC
* * * * * * *
18951008 AGGGCACCATCATCGGATCATCGTCGGAGAACCTAACCGGCGGAATTGGGGTTCCGGTGATCGGG
449 GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC-GG
** * * *
18951073 GGGGCCAAGGGGTTTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATGTTGGCCCT
513 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
18951138 CTATCCCTCATCAAACCTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTA
578 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
** * *
18951203 CTGCCAGTATTCATTAAAGTGTCTGAAATTGGGACACTTTTTTCAAATGGTCACAAAATGTTGTA
643 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * * *
18951268 CACTTTGGGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTACCA
708 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCA
* * * * *
18951333 TGGTTGGGGCCAAAACGCCTTCCGAAAAAATTTTAGAAAATCCCAAACCGTAAAAAGTTTCAAAA
773 AGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAA
* * *
18951398 ATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATTAAGGCTTAAGGGA
838 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
18951458 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAGGCAAAAATATGAAGATGTTCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * * *
18951523 ACACACCTACCACCCTATCAATCCATGGCTTGCGCATCCCATCTCTCTGGCCGGCGTAGTGCCTG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * *
18951588 CCCGCCCACCTGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCA
131 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * * ** ** * *
18951653 GACCGGACTGAAGGTTATGGCAGCAGGATCGGTATTACATAGAGTGGGACCCGACCGATCCCCGA
196 GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCCCCGG
* * * *
18951718 CTTGTGAATCTCGCCCCTCTGGCCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGC
260 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* *
18951783 ATACGGAGTTCATTCACAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-GATCC
325 ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGA-CC
* ** **** * *
18951847 GAGGGTTACGGTAGCACATAATGGGCTCGGGCATGTGCTGCCATCGCTTTTTTCTTTGA-CGGGG
389 GAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC-TTCACCGGGG
** * * * * * * *
18951911 CACCATCACCGGAGCATCG-CCGAGAACTTGACCGGCGGGATTGGGATTCCAGTGATCGGGGGGT
453 CACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGG-
* * **
18951975 CGGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGATCCCCTAT
517 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* * *
18952040 CTCTCATCAAACTTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTC
582 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
18952105 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
647 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * *
18952170 TTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAACACAAGGATCACGTCTACCAAGTT
712 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTT
* * * *
18952235 TGGGGCCAAAAATCCTTCCGAAAAAATTTTAGAAAATCCCAAACCGTAAAAAGTTTCAAAAATCA
777 TGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCG
* *
18952300 TGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGA
842 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * * * *
18952356 ACATTGTATGAATTTACAAGCTATAAAAATTGCATTGGCATGTAGAAATATAAAGATGTGCCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * *
18952421 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGTCGGCGTATTTCTCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA---GT-G
* * * * *
18952486 CCCACCCGCCTGCCCGTTTGTTTCGTCGGTTGGCTTAGGCGTACGGAGTTCATTCCCAGTCTAAG
127 CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
** * * * * * *
18952551 ATTGGACCCGACAGAGGGTTATGGCAGCAGGATCGACAGCACGCAGAGTGGGACCCGGTCGATCC
192 ATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GCCGATCC
* * * * * * *
18952616 CCGACTTGTGCATCCCGCCCCTTTGGTCGGCTGAAG-GCCTGCACGCTCATTTCGTGGGTTGAGT
256 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG-AGCGCCCGCACGCTCGTTTCGTGGGTTGACT
* *
18952680 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCCAAGATCGGACCA
320 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG
** * * *
18952745 GACCGAGGGTTACGATAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGTATTTTTCTTCACTG
385 GACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCG
* * * * *
18952810 GGGCCCCATCGTCGGAGCATCGTTGGAGAACCTGACTGACGGCATTAGGGTTTCGGCGATCGTGG
450 GGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCG-GG
* *
18952875 GGGCCAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGATACTTGGCCCTTATATTGGCCCCC
514 GGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
**
18952940 TATCCCTCATCAAACCTTAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
579 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* *
18953005 TGCCAGTAGCCGTTAAAGTGTCTGAAATGGGGACACTTTTTTCATATGGTCACAAAATCTTGTAC
644 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
*
18953070 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAAAATACAAGGATCACGTCTACG
709 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC--AAAAAAAATACAAGGATCACGTCTACC
*
18953135 AAGTTTGGGGCCAAAACTCCTT-C-----------------T---GAACCGTAAAAAGTTTCTAA
772 AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAA
*
18953179 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGA
837 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
18953240 CCATTGTACGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGTCTAA
1 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
* * * *
18953305 ACCCACCTACCACCCTATCAATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGACGTGGTGCCCG
66 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * ** * *
18953370 ACCGCTCTCCCGCCGGCTAATTTTGTCGGTTGGCTTAGGCATACTGAGTTCATTCCCAGTCTAAG
131 --C-C-CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* *
18953435 ATCAGATCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCC
192 ATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG-CCGATCC
* * * * * * * * * * *
18953500 CCGACTTGTGCATCCTGCCCCTCCGACAGGCTGAGCACTCTCTCGCTCATTTCGTGGGTTGACTT
256 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
*
18953565 AGGCATACAGAGTTCATTCCCAGTCTAAG
321 AGGCATACGGAGTTCATTCCCAGTCTAAG
18953594 ATTGGATCAG
Statistics
Matches: 15176, Mismatches: 1713, Indels: 725
0.86 0.10 0.04
Matches are distributed among these distances:
854 269 0.02
855 5 0.00
857 1 0.00
859 40 0.00
860 176 0.01
861 6 0.00
862 253 0.02
863 4 0.00
865 1 0.00
867 3 0.00
868 184 0.01
869 6 0.00
870 131 0.01
871 307 0.02
872 284 0.02
873 471 0.03
874 168 0.01
875 21 0.00
876 48 0.00
877 7 0.00
878 5 0.00
879 869 0.06
880 931 0.06
881 148 0.01
882 188 0.01
883 109 0.01
884 685 0.05
885 41 0.00
886 5 0.00
887 26 0.00
888 491 0.03
889 218 0.01
890 474 0.03
891 253 0.02
892 1186 0.08
893 242 0.02
894 154 0.01
895 10 0.00
896 362 0.02
897 671 0.04
898 1305 0.09
899 356 0.02
900 292 0.02
901 1057 0.07
902 573 0.04
903 639 0.04
904 427 0.03
905 949 0.06
906 1 0.00
907 1 0.00
908 4 0.00
909 65 0.00
910 7 0.00
911 47 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (897 bp):
CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAA
ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
GACCAGACCGAGGGTTGTGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGCCGATCCCCGGC
TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
TACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGA
GGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCAC
CATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGCCGG
GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
CATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGT
AGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
GTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGG
GCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAA
AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
Found at i:18938970 original size:27 final size:27
Alignment explanation
Indices: 18938912--18938970 Score: 66
Period size: 27 Copynumber: 2.2 Consensus size: 27
18938902 ACTCCTTCCG
**
18938912 AAAAAATTTTAAAAAGTCCTGAACCAT
1 AAAAAATTTTAAAAAGTCCTGAAAAAT
* *
18938939 AAAAAGTTTTAAAAA-TCGTGAAAAAT
1 AAAAAATTTTAAAAAGTCCTGAAAAAT
*
18938965 AGAAAA
1 AAAAAA
18938971 CGAGTCATCT
Statistics
Matches: 26, Mismatches: 6, Indels: 1
0.79 0.18 0.03
Matches are distributed among these distances:
26 12 0.46
27 14 0.54
ACGTcount: A:0.58, C:0.08, G:0.10, T:0.24
Consensus pattern (27 bp):
AAAAAATTTTAAAAAGTCCTGAAAAAT
Found at i:18940236 original size:26 final size:26
Alignment explanation
Indices: 18940206--18940261 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
18940196 TGGGTTGACT
18940206 TAAGCATACAGAGTTCATTCCCAGTC
1 TAAGCATACAGAGTTCATTCCCAGTC
*
18940232 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACAGAGTTCATTCCCAGTC
18940258 TAAG
1 TAAG
18940262 ATCAGACTGG
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.30, C:0.25, G:0.18, T:0.27
Consensus pattern (26 bp):
TAAGCATACAGAGTTCATTCCCAGTC
Found at i:18941121 original size:26 final size:26
Alignment explanation
Indices: 18941092--18941143 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
18941082 TTGACTTAGC
*
18941092 CATATAGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
*
18941118 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
18941144 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.25, G:0.17, T:0.29
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAAG
Found at i:18942921 original size:26 final size:26
Alignment explanation
Indices: 18942892--18942942 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
18942882 TGACTTAGTT
18942892 ATACGGAGTTCATTCCCAGTCTAAGC
1 ATACGGAGTTCATTCCCAGTCTAAGC
*
18942918 ATACGGAGTTCATTCCGAGTCTAAG
1 ATACGGAGTTCATTCCCAGTCTAAG
18942943 ATTGGACCGG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.24, G:0.22, T:0.27
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAGTCTAAGC
Found at i:18944695 original size:26 final size:26
Alignment explanation
Indices: 18944655--18944707 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18944645 GTTGACATAG
18944655 GCATACGGAGCTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
* *
18944681 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
18944707 G
1 G
18944708 ATCAGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:18945585 original size:26 final size:26
Alignment explanation
Indices: 18945556--18945608 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18945546 GTTGAATTAG
*
18945556 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
18945582 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
18945608 G
1 G
18945609 ATCAGACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:18946043 original size:905 final size:902
Alignment explanation
Indices: 18939332--18953593 Score: 18644
Period size: 901 Copynumber: 16.0 Consensus size: 902
18939322 TGGGTTGACT
* *
18939332 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* ** * * * *
18939397 GGGCTTGGTAATGTGCTGGTGCCACATTTCTCTTCGCCGGGGCACCATCGCCGAAGCATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
* * ** *
18939462 AGAACCTGACCGACGGCACTGGGGTTCCGGTGATCTAGGGGGCCGGGGGGGTGTGCGCACATAAT
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
* * *
18939527 GTGCAATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTAC-AGAGC
196 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT-CGAGAAC
* * * * *
18939591 TCACAGCCCCTTAAAGAGCAATTGAGATTTTACAGGTTTGTTGCCAGTAACAATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
18939656 AAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTAT-GAGTTTTCAGCTGAATTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTT
*
18939720 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTCCTTCCG
389 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* * ** *
18939785 AAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTC
454 AAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
*
18939850 GTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
519 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
*** * *
18939915 TGGCATTGGCACATAGAAATATGAAGATATGCCTAAACCCACCTACCGCCCTATCGATCCACGGC
584 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * *
18939980 TTGCACATCCCGTCTCTCTGGCTGGTGTAGTGCCCG-C-ACGCCCGCCCGCTCGTTTCGACGGTT
649 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTT
* * *
18940043 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACTGAGGGTTGTGGCAGCAGG
714 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGG
* * * * ** *
18940108 ATCAGTAGCATGTAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGC
779 ATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * *
18940173 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAAGCATACAGAGTTCATTCCCAGTC
844 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
** * * * * *
18940232 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGATCGAGGGTTGCGGTAGCAAATGTT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * * *
18940297 GGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCTCCGAAGCATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
* * * ** * * *
18940362 AGAACCTGACCGGCGACATTGGGGTTCCGGTGATCTAGGGGCCCGGGGGGGGTGTGCACACATAA
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGGTGTGCGCACATGA
* * * * *
18940427 TGTGCAATGGGTGCTAGTACTTGGCCCTTATATTAGTCCCCTATCCCTCATCAAACCTCCAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * * *
18940492 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCAATTAAAGTATGTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
18940557 AAATGGGGACACTTTTTTCAAATGGTCACAAATTCTTGTACACTTCGAGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
18940622 TTTGTGCATGCCAACAAAAATACAAGGATAATGTCTACCAGGTTTGGGGCCAAAACTCCTTTCGA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
*
18940687 AAAAATTTT----AA----AAA--GT------TTT-AAAAATCATGAAAAATAGAAAACGAGTCA
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
18940735 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * * *
18940800 GGAACTGGCATGTAGAAATATGAATATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
18940865 TGCGCATCCCATCTCTCTAGCCGACGTAGTGCCCG-C-CCGCCCGTCCGCTCGTTTCGTCGGTTG
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * * * * * *
18940928 GCTTAGGCATATGGAGTTCATTCCCAGTCTAAGAGCAGATCGACCCAAGGGTTGCGGTAGCAAGA
715 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGGA
* * *
18940993 TCGGCAGCACGCAAAGGGGGACCCGGTCGATCCCCGACTTGCGCATTCC-CCCCTCTGGCCGGCT
780 TCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * **
18941057 GAACGCCCGCACGCTTG-TTCGTGGGTTGACTTAGCCATATAGAGTTCATTCCCAGTC
845 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
18941114 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACAGAGGGTTACAGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * **
18941179 GGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTC-ACCGGGGCACCATCGCCGGAGCATCACCG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGA-CGGGGCACCATCGCCGGAGCATCGTCG
* * ** *
18941243 GAGAACCTAACCGACGGCATTGGGGTTCCAGCGATTAGGGGGGCC-AGGGGGTGTGCGCACATGA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
** * *
18941307 TGTGCGATGGGTGCTCATACTTGGCCCTTATATTGGCCCCTTATCCCTCAACAAACCTCGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
18941372 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCGATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * **
18941437 AAATGGGGGCACTTTTTTCAAATTGTCACAAAATCTTGTACACTTTAAGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * *
18941502 TTTTTGCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATTCCTTCTGA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * * *
18941567 AAAAATTTTAAAAAATCTCGAACCGCAGAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
18941632 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
18941697 GGCATTGGCATGCAGAAATATGAAGATGTACGTAAACCCACCTACCACCCTATCGATCCACGGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
18941762 TCCGCATCCCGTCTCTCTGGTCGACGTAATGACCGCCTGCCTGCCCG-CCGCTCGTTTCGTCGGT
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCC-GCC-GCCCGCCCGCTCGTTTCGTCGGT
* *
18941826 TGGCTTAGGCATACGGAGTTCATTCCCAGCCTAAGATCAGACCCAACCGAGGGTTGTGGCAGCAG
713 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAG
* * * * *
18941891 GATTGGCAACACGCAGAGGGGGA-CCGGTCGATCCTCGGGTTGCGCATCCTGCCCCTCTGGCCGG
778 GATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * *
18941955 TTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
843 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * *
18942015 TAAGCAAATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGTTTACGACAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * ** *
18942080 GGGTTCGAGCATGTGCTGGTGCCGCATTTTTCTTCTTCGGGGCACCATCGCCGGAGCATCATCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
* * * * ** **
18942145 AGAACCTGACCGGCAGCATTGGGGTTCCGACAATCGAAGGGGCTAGGGGGGTGTGCGCACATGAT
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
*
18942210 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
196 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* *
18942275 CACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGGCATTAAAGTGTCTGA
261 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
18942340 AATGGGGGCACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
326 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* *
18942405 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTATGGGTCCAAAACTCCTTCCGAA
391 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * * * *
18942470 AAAA-TTTAAAAAATCCCAGACCGCAAAAAGTTTCCAAAATCGTGAAAAATAAAAAACGAGTTGT
456 AAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
*
18942534 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCATAAAAATG
521 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * * *
18942599 GAATTGCCATGCACAAATATGAAGATGTGGCTAAACCCACCTACCACCCTATCGATCCATGGCTT
586 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
18942664 GCGCATCCCATCTCTCTGGCCAGCGTAGTGCCCG-C-CTGCCCGCCCGCTCGTTTCGTCGGTTGG
651 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGG
* * * * * * *
18942727 CTTAGGCATATGGAGTTCATTCCCCGTCGAAGATCTGACCGGACTGAGGGTTGGGGCAGCAGGAT
716 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGGAT
* * * * *
18942792 TGGCAGCATGCAGAAGGGGACCCGG-CGATCCCCGACTTGCGCATCCCGCCCCTCTAGCCGGCTG
781 CGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * **
18942856 AACGCCCGTACGCTCGTTTCGTGGGTTGACTTAGTTATACGGAGTTCATTCCCAGTC
846 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* ** *
18942913 TAAGCATACGGAGTTCATTCCGAGTCTAAGATTGGACCGGACCGAGGGTTACGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* *
18942978 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-ACCGGGGCACCATCGCTGGAGCATCGCCG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGA-CGGGGCACCATCGCCGGAGCATCGTCG
* * * * * *
18943042 GAGAACCTGACCGACGGCATTGGGATTTCGGCGATCGGGGGGGTCGGGGGGGTCTGCACACATAA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
* * *
18943107 TGTGCGATGGCTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATTAAACCTCGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
18943172 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
18943237 AAATGGGG-CACATTTTTCAAATGGTCCCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
18943301 TTTGTGCATGCC-AACAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCCA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * * * * *
18943365 AAAAATTTTTAAAAATCTCGAACGGCAAAAAGTTTAAAAAATCATGAAAAATAGAAAATGAGTCG
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
*
18943430 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAACAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
18943495 GGCATTGGCATGCAAAAATATAAAGATGTGCCTAAACCC-CCTACCACCCTATCGATTCACGGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
18943559 TGCGCATCCCGTCTCTCTGGTCGACGTAGTGCCC-AC-CCGCCCACCCGCTCGTTTCGTCGGTTG
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTTG
** * * * ** ** *
18943622 GCTTAGGTGTACGAAGTTCATTCCCAGTGTAAGATCAGACCAAACTAAGGGTTACGGTAGCAGGA
715 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGGA
** * * ** *
18943687 TCGAAAACATGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCT
780 TCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * *
18943752 GAGCGCCTGTACGCTCGTTTCGTGGGTTGACTTAAGCATACGGAGTTCATTCCCAGTC
845 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
18943810 TAAG-AT-C-G-G---A----C---C--AGAT----------CGAGGCTTATGGCAGCACAT-TT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * *
18943848 AGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGACGGGGTACCATCGTCGGAGCATCGTCG
66 -GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCG
* * * *
18943913 GAAGAACCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGGGACC-GGGGGGTGTGCGCACATG
130 G-AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATG
18943977 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
194 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
18944042 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACA-GTTTGCTGCCAGTAGCCATTAAAGTGTCT
259 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * *
18944106 GAAATGGGGACACTTTTTTCAAATGATCACCAAATCTTGTACACTTCGAGTTTCTAGCTGAATTT
324 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * *
18944171 TTTTGTTCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCCG
389 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* * * * * *
18944236 AAAAAATTTTAAAAAATCCCGAATCATAAAAAGTTTCAAAAATCGTGAAAAATAAAAAATGAGTC
454 AAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* * * *
18944301 ATCTTGCCATGAAAGTTCAGGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAA
519 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* *
18944366 TGGCATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTA-CACCCTATCGATCCACGGC
584 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * *
18944430 TTGCGCATCCCGTCTCTCTGGCCGGCATAGT----G-C-CTGCCCACCCGCTCGTTTCGTCAGTT
649 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTT
** ** * * * * *
18944489 GGCTTAGGCATACAAAGTTCATTCGTAGTCTAAGATCAGACCGGACTGAGGGTTGTTGTAGCAAG
714 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGG
* * * ** * * *
18944554 ATTGGCAGCACGC-GAAGCGGGACCCGATCGATCCCTTGATTGCGCATCCCACCCCTCTGGCCAG
779 ATCGGCAGCACGCAG-AGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * * *
18944618 TTGAGCGGCCGCACGCTCATTTCGTGGGTTGACATAGGCATACGGAGCTCATTCCCAGTC
843 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * ***
18944678 TAAGCATACGGAGTTCATTCCTAGTCTAAGATCAGACC-GAACCAAGGGTTGTAGCAGCACATGC
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTACGGCAGCACATGC
*
18944742 TGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTC-ACCGGGGCACCATCGCCGGAGCATCGTC
65 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGA-CGGGGCACCATCGCCGGAGCATCGTC
* * * *
18944806 GGAGAACCTGACCGGCAGCATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGGTGTGCGCACATC
129 GGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATG
*
18944869 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCGTCATCAAACCTCGAGAA
194 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
* *
18944934 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGTAGCAATTAAAGTGTCT
259 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
*
18944999 GAAATGGGG-GACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
324 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * *
18945063 TTTTGTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCC
389 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* * *
18945128 AAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTC
454 AAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
**
18945193 GTCTTGCCACAAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
519 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * * *
18945258 TGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCAGCTACCACCCTATCGATTCATGGC
584 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * *
18945323 TTGCGCTTCCCGTCTCTCTGGTCGGTGTAGTGCCCGGCCGTTCTCCCGCCCGCTCGTTTCGTCGG
649 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-GCCG-CCGCCCGCCCGCTCGTTTCGTCGG
* * *
18945388 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCCAAGATCAGACCGAACTGGGGGTTGTGGCAGCA
712 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCA
* * * * * ** *
18945453 GGATTGGCAGCATGCAGAGGGGGACCCGGTTGATCCTCGGCTTGCGCATCCTGCCTTTCTGGCCA
777 GGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * *
18945518 GCTGAGCGCCTGTACGCTCGTTTCGTGGGTTGAATTAGGCATACGGAGTTCATTCCCAGTC
842 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * ** * * * *
18945579 TAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGACTTACGACAGTACATTCA
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * * * *
18945644 GGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGACGAGGTACCATCGTCGGAGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
*
18945709 AGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
18945774 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
196 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
18945839 CACACCCCCTTAAAGAGCATTTGAGATTTTACAAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
261 CACACCCCCTTAAAGAGCATTTGAGATTTTAC-AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
18945904 AAATGAGGACACTTTTTTCAAATGGTCACCAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
18945969 TTTGTTCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * * *
18946034 AAAAATTTTAAAAAATCCCGAATCATAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCG
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
18946099 TCTTGCCATGAAAGTTCACGTGAAGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
*** *
18946164 GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACGGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
*
18946229 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCACGCCCGCCTGCCCGCTCGTTTCGTCGGT
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC-CG-CCGCCCGCCCGCTCGTTTCGTCGGT
* * *
18946294 TGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCGAACTGAGGGTTGTGGCAGCAG
713 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAG
* * * * ** *
18946359 GATCGGCAGCATGCAGAGAGGGACCCGGTCGATCCTCGGCTTGCACATCCTACCCTTCTGGCCGG
778 GATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
*
18946424 CTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
843 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * *
18946484 TAAG-ATA---AG---A-T--C-G-----GAT----------CGAGGGTTGCAGCAACACATACT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * *
18946523 GGGCTCGGGCATGTGCTGGTGCCGAATTTTTCTTTCGTCGGGGCACCATTGCCGGAGCATCGTCG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTC-TTCGACGGGGCACCATCGCCGGAGCATCGTCG
* **
18946588 GAGAACCTGAACGGGGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
18946653 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * *
18946718 TCATACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTTG-CAGTAGCCATTAAAGTATCT
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC-TGCCAGTAGCCATTAAAGTGTCT
* *
18946782 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTCCACTTCGAGTTTTTAGGTGAATTT
324 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * * **
18946847 TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTGCCATGTTTGGGGCCAAAACTCCTTTTG
389 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* * ** * * *
18946912 AAAAAATTTTAAAAAATCTCGAACCAAAAAAAGTTTCAAAAATCGTAAAAAATCGAAAACGAGTC
454 AAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* *
18946977 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATCTGAATTTACAAGCCATAAAAA
519 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * * *
18947042 TGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTATCACCCTATCGATTCACTGC
584 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * *
18947107 TTGCGCATCTCGTCTTTCTGGTCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTTC-TTTTGTCG
649 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CCG-CCGCCCGCCCGC-TCGTTTCGTCG
* * * * * * *
18947171 GTTGGCTTAGGCATACAGAGTTAATTACCAGTATAAGATCGGATC-AGACCGAGGGTTATGGCAG
711 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGTGGCAG
* * * **
18947235 CAGGATTGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
775 CAGGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * * * ***
18947300 CGGTTGAGCGCCCGCACGCTCGTTTCTTGGGTTAACTTAGGCATACGGAGCTCATTTGTAGTC
840 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * *
18947363 TAAGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * * *
18947428 AGGCTCGAGCATGTGCTGCTGCCGCATTTTTCTTCGCCGGGG---CA----C----CATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
* * * *
18947482 AGAACCTGATCGGCGGCATTGGGGTTCCGACGAT-GGCGGGGGTC-GGGGGGTGTGCGCACATGA
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGG-GGGGGCCGGGGGGGTGTGCGCACATGA
*
18947545 TGTGCGATGGGTGCTGGTACTTGGCCCTTAGATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
18947610 TCACACCACCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTA
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
18947675 AAATGGGGACACTTTTTTCAAATGGTCACCAAATCTTGTACACTTTGGGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * *
18947740 TTTGTGCATGCCAAAAAAAATAAAAGGATCACGTCTACAAAGTTTGGTGCCAAAACTCCTTCCAA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * *
18947805 AAAAATTTTAAAAAATCCCAAACCATAAAAAGTTTCAAAAATTATGAAAAATAGAAACCGAGTCG
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
18947870 TCTTACCGTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * * *
18947935 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCGAGCACCCTATCGATCTA-TGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * *
18947999 TGCGCATCCCGTCTCTTTGGCCGGCGTAGT----G-C-CCGTCCGCCCGCTCGTGTCGTTGTTTG
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTTG
* ** ** * * *
18948058 GCTTAGGCATATGGAGTTCATTCATAGTCTAAGATTGGA-CTAGACCGAGTGTTGCGGCAGCAGG
715 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGTGGCAGCAGG
* * * * *
18948122 AT---CAACACACAGAGGGGGACCCGGGCGATCCCCGGCTTACGCATCCCGCCCCTCTGGCTGGC
779 ATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
* * * *
18948184 TTAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTGCATTCCTAGTC
844 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * *
18948243 TAAGCATATGAAGTTCATT-CCAGCCTAAGATCGGACCAGACCGAGGGTTACGGTAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * * * * * * *
18948307 GGGCTCGGGCATGTGTTGGTGTCGTAATTTTCTTCGCCGGGGCACCATCGCCAGAGCGTC-ACTG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTC-G
* * *
18948371 GAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGTGGCCGAGGGGGTGTGCGCACATGA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
*
18948436 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
18948501 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTTAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
18948566 AAATAGGGATACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * ** * *
18948631 TTTGTGCATGCCAACAAAAAATACAATGACCAAGTCTATGAACTTTGGGGCCAAAACTCCTTCCA
390 TTTGTGCATGCCAA-AAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
*
18948696 AAAAAATTTTAAAAAATCCCGAAACAC--AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
454 AAAAAATTTTAAAAAATCCC-AAAC-CGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
18948759 TCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
517 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
18948824 AATTGCATTGGCATGCAGAAATATGAAGATGTACCTAAACCCACCTACCACCGTATCGATCCACG
582 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* **
18948889 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGTCCATCCGCCCGCCCGCTAATTTCGTC
647 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CC-GCCGCCCGCCCGCTCGTTTCGTC
* ** * * * * *
18948954 GGTTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGATCGAGGATTATGGTAG
710 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAG
* * * * * * * *
18949019 CAAGATCAGTAGCATGCAGAGGGGGACCCGGTCGATCCCCGACTTGCGCATCCCGTCCCACAGGC
775 CAGGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * *
18949084 CGGTTGAGCACCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
840 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
18949147 TATGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * * * *
18949212 GGGCTTGGGCATGTGCTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
* * * *
18949277 AGAACTTGACCGACGGCATTAGGGTTCCGACGATC-GGGGGGCCGAGGGGTGTGTGCGCACATGA
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGGTGTGCGCACATGA
* * *
18949341 TGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAAACCTTGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
18949406 TCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
18949471 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTCTACACTTCGAGTTTATAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
18949536 TTTGTGCATGCCAACAAAAATGCAAGGATCATGTCTACGAAGTTTGGGGCCAAAA-TGCCCTCCG
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCTTCCG
* * * *
18949600 AAAAAATTTTAAAAAATCCTAAACTGTAAAAAGTTTCAAAAATCATGAAAGATAGAAAATGAGTC
454 AAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* *
18949665 GTCTTGCCTTGAAACTTCACGTGAAGGCTTGAGGGACCATTGTATGAATTTACAAGCCATAAAAA
519 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
**
18949730 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
584 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * * * *
18949795 TTGCGCATCCCATCTCTCTGGGCGGTGTAGT----G-C-CCGCCCGTCTGCTTGTTTCGTCAGTT
649 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTT
* * * ** ** *
18949854 GGCTTAGGCATATGGAGTTCATTCCTAGTCCAAGATTGGACC-AGACCGAGGGTTGCAGCAGTAG
714 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGTGGCAGCAG
* * ** * * *
18949918 GATCGACAGCACACAGAGGGGGACCCGACCGATCCCCGACTTGTGCATCCCGCCCCTCTGGCTGG
778 GATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * *
18949983 CTGAGCGCCCGTATGCTCGTTTCGTGGGTTGACTTAGGCATATGCAGTTCATTCCCAGTC
843 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
**
18950043 TAAG-AT-C-G-G---------A--C------C-G---A-ACCGAGGGTTGTGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* *
18950082 GGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGG---CA----C----CATCGTCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
* * * * * *
18950136 AGAACCTAACCGACGGCATTGGGGTTCTGGCAATCGGAGGCGTCAGGGGGGGTGTGCGCACATGA
131 AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGG-GGGGGCCGGGGGGGTGTGCGCACATGA
** * * * * **
18950201 TGTTTGACGGGTGCTGGTTCTTGGCCCTTATAGTGGCCCCCTATCCCTCATCAAATCTTAAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * *
18950266 TCATACCCCCTTAAAGAGCATTTCAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
18950331 AAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA---C---TTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
***
18950390 TTTAG-GCAAAACAAAAAAAATACAAGGATCACGTCTACCCAA-TTTGGGGCCAAAACTCCTTCC
390 TTT-GTGCATGCCAAAAAAAATACAAGGATCACGTCTA-CCAAGTTTGGGGCCAAAACTCCTTCC
* * ** *
18950453 GAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTGAAAATCATGGAAAATAGAAAACGAGT
453 GAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
18950518 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
518 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * * * *
18950583 ATGGCATTGGCACGTAGAAATATGAAGATCTGCCTAAACCCACCTATCACCCTATCGATCCACAG
583 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * *
18950648 CTTGTGCATCTCGTCTCTCTGGCCGGTGTAGTGCCTGGCCGCCCGCCCGCCCGCTCGTTTCGTCG
648 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCC-CGCCG-CCGCCCGCCCGCTCGTTTCGTCG
* * * * ***
18950713 GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAATATCAGACCGGACCCAGGGTTGCAACAGC
711 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGC
* * ** * **
18950778 AGGATCGGTAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGTATCCCTTCCCTCTGGCC
776 AGGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* *
18950843 GGCTTAGCGCCC-CTACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
841 GGCTGAGCGCCCGC-ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * ** * *
18950905 TAAGCATGCGGAGTTCATTCCCAGTATAAGATCGGACGTGACCGAAGGTTAAGGCAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* ** *
18950970 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-ATCAGGGCACCATCATCGGATCATCGTCG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGA-CGGGGCACCATCGCCGGAGCATCGTCG
* * * * ** *
18951034 GAGAACCTAACCGGCGGAATTGGGGTTCCGGTGATCGGGGGGGCC-AAGGGGTTTGCGCACATGA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
* *
18951098 TGTGCGATGGGTGCTGGTACTTGGCCCTTATGTTGGCCCTCTATCCCTCATCAAACCTCGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * **
18951163 TCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTATTCATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
18951228 AAATTGGGACACTTTTTTCAAATGGTCACAAAATGTTGTACACTTTGGGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
18951293 TTTGTGCATGCCAACAAAAATACAAGGATCACATCTACCATGGTTGGGGCCAAAACGCCTTCCGA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
*
18951358 AAAAATTTTAGAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* *
18951423 TCTTGCCATGAAACTTCACATTAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * * * *
18951488 GGCATTGGCAGGCAAAAATATGAAGATGTTCCTAAACACACCTACCACCCTATCAATCCATGGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
18951553 TGCGCATCCCATCTCTCTGGCCGGCGTAGTGCCTG-C-CCGCCCACCTGCTCGTTTCGTCGGTTG
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTTG
* * * * *
18951616 GCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAAGGTTATGGCAGCAGGA
715 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGGA
* ** ** * ** * * * *
18951681 TCGGTATTACATAGAGTGGGACCCGACCGATCCCCGACTTGTGAATCTCGCCCCTCTGGCCGGCT
780 TCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
18951746 GAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCACAGTC
845 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* **
18951804 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-GATCCGAGGGTTACGGTAGCACATAA
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGA-CCGAGGGTTACGGCAGCACATGC
**** * * * *
18951868 TGGGCTCGGGCATGTGCTGCCATCGCTTTTTTCTTTGACGGGGCACCATCACCGGAGCATCG-CC
65 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCG
* * * * * * * *
18951932 GAGAACTTGACCGGCGGGATTGGGATTCCAGTGATC-GGGGGGTCGGGGGGGTGTGCACACATGA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
** * *
18951996 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGATCCCCTATCTCTCATCAAACTTCGAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
18952061 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTAGCCATTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
18952126 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * *
18952191 TTTGTGCATGCCAACAAAAACACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGA
390 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* *
18952256 AAAAATTTTAGAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCG
455 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
* * *
18952321 TCTTGCCATGAAACTTCACATGAAGGCTTAAGGGAACATTGTATGAATTTACAAGCTATAAAAAT
520 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
18952386 TGCATTGGCATGTAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
585 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * * * * *
18952451 TGCGCATCCCGTCTCTTTGGTCGGCGTATTTCTCGCCCACCCGCCTGCCCGTTTGTTTCGTCGGT
650 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CC-GCCGCCCGCCCGCTCGTTTCGTCGGT
* ** * *
18952516 TGGCTTAGGCGTACGGAGTTCATTCCCAGTCTAAGATTGGACCCG-ACAGAGGGTTATGGCAGCA
713 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CCGAACCGAGGGTTGTGGCAGCA
* * * * * *
18952580 GGATCGACAGCACGCAGAGTGGGACCCGGTCGATCCCCGACTTGTGCATCCCGCCCCTTTGGTCG
777 GGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * *
18952645 GCTGAAG-GCCTGCACGCTCATTTCGTGGGTTGAGTTAGGCATACGGAGTTCATTCCCAGTC
842 GCTG-AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * **
18952706 TAAGCATACGGAGTTCATTCCCAGTCCAAGATCGGACCAGACCGAGGGTTACGATAGCACATGCT
1 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
* * * * *
18952771 GGGCTCAGGCATGTGCTGGTGCCGTATTTTTCTTC-ACTGGGGCCCCATCGTCGGAGCATCGTTG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGAC-GGGGCACCATCGCCGGAGCATCGTCG
* * * * *
18952835 GAGAACCTGACTGACGGCATTAGGGTTTCGGCGATCGTGGGGGCC-AGGGGGTGTGCGCACATGA
130 GAGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
* **
18952899 TGTGCGATGGGTGCTGATACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTAAGAAC
195 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
18952964 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCGTTAAAGTGTCTG
260 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
18953029 AAATGGGGACACTTTTTTCATATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
325 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
*
18953094 TTTGTGCATGCCAAAAAAAAAATACAAGGATCACGTCTACGAAGTTTGGGGCCAAAACTCCTT-C
390 TTTGTGCATGCC--AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * *
18953158 -----------------T---GAACCGTAAAAAGTTTCTAAAATCGTGAAAAATAGAAAACGAGT
453 GAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
* *
18953203 CGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTACGAATTTACAAGCCATAAAA
518 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * *
18953268 ATGGCATTGGCACGCAGAAATATGAAGATGTGTCTAAACCCACCTACCACCCTATCAATCCACGG
583 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * * ** *
18953333 CTTGCGCATCTCGTCTCTCTGGCCGACGTGGTGCCCGACCGCTCTCCCGCCGGCTAATTTTGTCG
648 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CCGC-CGCCCGCCCGCTCGTTTCGTCG
* *
18953398 GTTGGCTTAGGCATACTGAGTTCATTCCCAGTCTAAGATCAGATC-AGACCGAGGGTTGTGGCAG
711 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACCGAGGGTTGTGGCAG
* ** * * * * *
18953462 CAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGTGCATCCTGCCCCTCCGAC
775 CAGGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * * * * * *
18953527 AGGCTGAGCACTCTCTCGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTC
840 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
18953590 TAAG
1 TAAG
18953594 ATTGGATCAG
Statistics
Matches: 11763, Mismatches: 1357, Indels: 500
0.86 0.10 0.04
Matches are distributed among these distances:
854 269 0.02
855 5 0.00
857 1 0.00
859 39 0.00
860 180 0.02
861 5 0.00
862 188 0.02
863 3 0.00
864 1 0.00
865 1 0.00
866 1 0.00
867 3 0.00
868 182 0.02
869 2 0.00
870 102 0.01
871 251 0.02
872 287 0.02
873 4 0.00
874 1 0.00
875 3 0.00
878 1 0.00
879 663 0.06
880 572 0.05
881 5 0.00
882 190 0.02
883 111 0.01
884 675 0.06
885 4 0.00
886 2 0.00
887 3 0.00
888 62 0.01
889 5 0.00
890 43 0.00
891 251 0.02
892 1036 0.09
893 200 0.02
894 79 0.01
895 9 0.00
896 389 0.03
897 668 0.06
898 981 0.08
899 359 0.03
900 286 0.02
901 1054 0.09
902 567 0.05
903 640 0.05
904 426 0.04
905 953 0.08
906 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (902 bp):
TAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCT
GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCACCATCGCCGGAGCATCGTCGG
AGAACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
AAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGG
CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCAGGAT
CGGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
Found at i:18949153 original size:26 final size:26
Alignment explanation
Indices: 18949124--18949174 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
18949114 GTTGACTTAG
*
18949124 GCATACGGAGTTCATTCCCAGTCTAT
1 GCATACGGAGTTCATTCCCAATCTAT
18949150 GCATACGGAGTTCATTCCCAATCTA
1 GCATACGGAGTTCATTCCCAATCTA
18949175 AGATCAGACC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.27, G:0.18, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAT
Found at i:18950916 original size:26 final size:26
Alignment explanation
Indices: 18950882--18950934 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18950872 GTTGACTTAG
*
18950882 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
*
18950908 GCATGCGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
18950934 G
1 G
18950935 ATCGGACGTG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:18951817 original size:26 final size:26
Alignment explanation
Indices: 18951781--18951833 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18951771 GTTGACTTAG
18951781 GCATACGGAGTTCATTCACAGTCTAA
1 GCATACGGAGTTCATTCACAGTCTAA
*
18951807 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCACAGTCTAA
18951833 G
1 G
18951834 ATCAGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCACAGTCTAA
Found at i:18954239 original size:26 final size:26
Alignment explanation
Indices: 18954210--18954262 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18954200 GTTGACTTAG
* *
18954210 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
18954236 GCATACAGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
18954262 G
1 G
18954263 ATCAGACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:18955619 original size:900 final size:893
Alignment explanation
Indices: 18953707--18960615 Score: 8480
Period size: 897 Copynumber: 7.8 Consensus size: 893
18953697 GACATTGGGG
* *
18953707 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACATCTACCATGTTTGGGGC
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* *
18953772 CAAAACTCCTTCCGAAAAAATTTTAGAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
* * * *
18953837 ATAAAAAATGAGTCGTACTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCAGTGTATGAATT
131 ATAGAAAACGAGTCGT-CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
* *
18953902 TACAAGCCATAAAAATTGCATTGGCATGCAGAAATATGAAGATGTCCCTAAACCCACCTACCACC
195 TACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
18953967 CTATCGATCCACGGCTTGC-CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCACCCGCT
260 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CG-CCGCCCACCCGCT
** * * * *
18954031 TATTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATCGGATCAAACCAAGGG
322 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CAGACCAAGGG
* * ** * * * * * * * * *
18954096 CTATGATAGCAGAATCGACAGAACATAGAGGGGGACCTGGCCGATCCCCGGCTTGCACATCTTGC
386 TTGTGGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACTGAT-CCCGACTTGCGCATCCTGC
* *
18954161 CCCTCTGGCCTGCTGAGCGCCCGCATGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
450 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT
* * *
18954226 CCCAGTCTAAGCATACAGAGTTCATTCCCAATCTAAGATCAGA-CTGGACGAAGGGTTACAGCAG
515 CCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATC-GGACGAA-GGTTACGGCAG
* * * * *
18954290 CACGTGCTGGGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTAGTCGGGGCACCATCGCCGGAGC
578 CACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGC
* * * * *
18954355 ATCG-CTGCAGAACCTGACCGGCGGCATTGAGGTTCCGACGATCGGGGGGTCGGGGGGGTGTGCG
643 ATCGTC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGAGGGCCGGGGGGGTGTGCG
*
18954419 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCT
707 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* * *
18954484 CGAGAACTCACACCCCCTTAATGAGCATTTGAGATTTTGCAGGTTTGCTGCCAGTAGCCATTAAA
772 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAA
*
18954549 GTGTCTTAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
837 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
* * * * * *
18954606 TTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAACACAAGGATCACGTCCACCTAGTTTGGGAC
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
**
18954671 CAAAA-TGCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAA
66 CAAAACT-CCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAA
* *
18954735 AATAGAAAACGAGTCCTTTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
130 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
* *
18954800 TACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
195 TACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* *
18954865 CTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGCATAGTGCCCGCCTGCCCACCCGCT
260 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CGCC-GCCCACCCGCT
* *
18954930 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGT
322 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CAGACCAAGGG
* * * *
18954995 TTGTGGCAACAGGATGGGCAGCACGTAGAGGGGGACCCGACTGATCCTCGACTTGCGCATCCCGC
386 TTGTGGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACTGATCC-CGACTTGCGCATCCTGC
* * *
18955060 CCC-CTTGGCCGACTGAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTAGGCTTACGGAGTTCAT
450 CCCTC-TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* ** * * *
18955124 TCCCAGTCTAAACATACATAGTTCATTCCCAGTCTAAGATCAGATCAGATCGAAGGTTGCGGTAG
514 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGA-CGAAGGTTACGGCAG
* * * *
18955189 CACATGCTGGACTCGGGCATGTGCTAGTGTCGTATTTTTCTTCGCCGGGGCACCATCGCCGGAGC
578 CACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGC
* * * * * *
18955254 ATCATTGGAGAACTTGACTGGCGGCATTGGGGTTCCGACGATCGGAAGGGCCGGAGGGGTGTGCG
643 ATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGG-AGGGCCGGGGGGGTGTGCG
* *
18955319 CACATGATGTGCGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCT
707 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* * * *
18955384 TGAGAACTCACACCCCCTTAAAGTGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAA
772 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAA
* *
18955449 GTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
837 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
*
18955506 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAACTACAAGGATCACGTCTACCAAGTTTGGGGC
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * *
18955571 CAAAACTTCTTCCGAAAAAAGTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
18955636 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
131 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
** *
18955701 ACAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCC
196 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* * * ** *
18955766 TATCGATCCACAGCTTGTGCATCCCGTCTCTCTGGTCGATGTAGTGC-CCGCCCGCCCGCTCGTT
261 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCCCACCCGCTCGTT
* * * * * * *
18955830 TCGTCAGTTGGCTTAGGCATACAGAGTTCATTCCCACTCTAAGATCGGACCGGACCGAGGGTTGC
326 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CAGACCAAGGGTTGT
* * * * *
18955895 GGCAGCAAGATCGGTAGCACACAAAGGGGGACCCG-GTCGATCCCTGACTTGCGCAT-CTCGCCC
390 GGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACT-GATCCC-GACTTGCGCATCCT-GCCC
* *
18955958 C-CTGGCC-GATAGAGAGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
452 CTCTGGCCGGCT-GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
* * * * * * ** *
18956021 CGAGTCTAAGCATACGGAGTTCATTCCTAGTTTAAGATCGGACCGGACCAAGGGTTGTGGCAACA
516 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACGAA-GGTTACGGCAGCA
* * * * *
18956086 CATGCTGGGCTCGGGCATGTGCTGGTG-CTGCATTTTTCTTCGCCAGGGTACCAGCGTCGGAGCA
580 CATGCTGGGCTCGGGCATGTGCTGGTGTC-GCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCA
* * * *
18956150 TCATCGTAGAACCTGACCGACGGCATTGGGGTTCCGGGGATC-GAGGGCCCGGGGGGGTGTGCGC
644 TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGAGGG-CCGGGGGGGTGTGCGC
*
18956214 ACATGATGTGCGATGGGCGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
708 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
* * **
18956279 AAGAACTCA-ACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAATAGTAATTAAAG
773 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAG
*
18956343 TGTCTGAAAGGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
838 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
* * *
18956399 TTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGCATCACGTCTACCAAGTTTGGGGG
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * * * * *
18956464 AAAAATTCCTTTCGAAAAAATTCTAAAAAATCCCGAATCGTAAAAAGTTTCAAAAATCTTGAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
*
18956529 ATAAAAAACGAGTCGTC-T----TG---C--CA--T----G---AA---ACCATTGTATGAATTT
131 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
** * *
18956572 ACAAGCCATAAAAATGGCATTTCCATGCAGAAATGTGAATATGTGCCTAAACCCACCTACCACCC
196 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* *
18956637 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGC-CCGCCCACCCACTCGTT
261 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCCCACCCGCTCGTT
* * * *
18956701 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCTCATTCTAAGAT-A-ACCGAACAAGGG-TGTG
326 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACAGACCAAGGGTTGTG
* * * * **
18956763 GCA-AAGGATCGGTAG--C--AGA----GA---GGC-GATCCC--TTTG-GCATTTTG-CCC-CT
391 GCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACTGATCCCGACTTGCGCATCCTGCCCCTCT
* * * * *
18956810 -GCTGGC--A-TG-CCGCACGCTC---TCGTGGTTTGA-TT---CATAC-GAATTCATT-CAAGT
456 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * *
18956861 C-AAG--TA-GGAG-TC-TTCCCAG-CTAAGAT-AGATC--ACGATGGTT-C-GTAGC-CAT-TT
521 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACGAAGGTTACGGCAGCACATGCT
* * *
18956912 GGGCTCGGG-AT-TG-T-GTGTCACA----TGTTCGTCGAGAGCACCAAT--CCGGAGCATCGTC
586 GGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCG-GGGCACC-ATCGCCGGAGCATCGTC
* * *
18956967 GGAGAACTCTGA-AGAAC-GC--T-GGGTTCCGGCGATCGGAGGG-CGAGGGGGGTCTGCGCACA
649 GGAGAAC-CTGACCG-GCGGCATTGGGGTTCCGGCGATCGGAGGGCCG-GGGGGGTGTGCGCACA
* * * *
18957026 TGATGTGCAAT-GGTGCTTGTACTTGGCCTTTATATT-G--CCCTAT-CCTCATCAAACCTCGAA
711 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
18957086 AACTCACA-CCCCTTAAAG-GCATTTGAGATTTTACAAGTTTGCTGCCAGT-G-CATTAAAAGTG
776 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATT-AAAGTG
*
18957147 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACGTTGAGT
840 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
* * * *
18957201 TTTTAGCAGATTTTTTTTATGCATGCCAACAAAAATACAAGGGTCACATCTACCAAGTTTGGGGC
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* ** *
18957266 CAAAACTCCTTTCGAAAAAATTTTAAAAAATTTCGAACCGTAAAAAGTTTCAAAAATCTTGAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
*
18957331 ATAAAAAACGAGTCGTC-T----TG---C--CA--T----G---AA---ACCATTGTATGAATTT
131 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
** * *
18957374 ACAAGCCATAAAAATGGCATTTCCATGCAGAAATGTGAATATGTGCCTAAACCCACCTACCACCC
196 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* * *
18957439 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGC-CCGCCCGCCTGCTCGTT
261 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCCCACCCGCTCGTT
* * *
18957503 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCTCATTCTAAGATCAGACCGAACCAAGGGTTGT
326 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACAG-ACCAAGGGTTGT
* * * * * * *
18957568 GGCAACAGGATCGGTAGCAGATAGAGAGGGACCCG-GTCGATCCCCAGCTTACGCATCCTGCCCC
390 GGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACT-GATCCCGA-CTTGCGCATCCTGCCCC
* * * * * *
18957632 TCTGGCCGGCAGAGCGCCCGCACGCTCGTTCCATTGTTTGACTTAGGCATACGGAGTTCATTCAC
453 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * *
18957697 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGATCGACGGTTACGGTAGCCCA
518 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGA-CGAAGGTTACGGCAGCACA
* * * * *
18957762 TGCTGGGCTCGGGCATGTGCTGGTGTCACATTTTTGTTCGTCGAGGCACCATCGTCGGAGCATAG
582 TGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG
18957827 TCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGAGGGCCGAGGGGGGTGTGCGCAC
647 TCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGAGGGCCG-GGGGGGTGTGCGCAC
* * *
18957892 ATGATGTGCAATGGGTGCTTGTACTTGGCCCTTATATAGGCCCCCTATCCCTCATCAAACCTCGA
710 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
* *
18957957 GAACACACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCTATTAAAGTG
775 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTG
18958022 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
840 TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
* *
18958076 TTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGGTCACGTCTACCAAGTTTGGGGC
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * * * * *
18958141 TAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACTGCAAAAAGTTGCAAAAATTGTGAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
* * * *
18958206 ATAGAAAACGAGTCATCTTGCAATGAAACTTTACGTGAAGGGTTAAGGGACCATTGTATGAATTT
131 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
*
18958271 ACAAGCC-TCAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACC
196 ACAAGCCAT-AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * * * *
18958335 CTATCGATCCACGACTTGCACATCTCGTCTCTCTGGCCGGCATAGTGC-CTGCCCGCCCACTCGT
260 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCCCACCCGCTCGT
* * * *
18958399 TTCGTCGGTTGGATTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGAACCAAGGGTTG
325 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACAG-ACCAAGGGTTG
** * * * * * *
18958464 CAGCAGTAGGATAGGCAGCACATAGAGGGAGACCCGAC-CATTACTCGGCTTGCGCATCCTGCCC
389 TGGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACTGA-T-CCCGACTTGCGCATCCTGCCC
* * * * * *
18958528 CTTTGGCTGGCTGAGCGCCCGTACGCTCATTTCGTGGGTTGACATAGGCATACGGAGTTCATTCA
452 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * *
18958593 CAGTCTAAGCGTACGGAGTTCATTCCCAGTATAAGATCAGATCGGACCGAGGGTTACGGCAACAC
517 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGA-CGAAGGTTACGGCAGCAC
* ** * *
18958658 ATGCTGGGTTCAAGCATGTGCTGGTGTCGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGCATC
581 ATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC
* * * * *
18958723 GTTGGAGAACCTGACCGGCGGTATTGGGTTTCTGGCGATCGGGAGGGTCGAGGGGGGGTGTGCGC
646 GTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGAGGG-C-CGGGGGGGTGTGCGC
* * * *
18958788 ACATGATGTGCAATGGGTGCTTGTACTTGGCCCTTATATAGGCCCCCTTTCCCTCATCAAACCTC
708 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
*
18958853 GAGAACTCACACCGCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAG
773 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAG
*
18958918 TGTCTG-AATGGGGACAGTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
838 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
* * *
18958973 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATAAAAGGGTCACGTCTACCAAGTTTGGGGT
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* *
18959038 GAAAACTCCTTCCGAAAAAA-TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
* *
18959102 ATAGAAAACGAGTCGTCTTGCAATGAAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTT
131 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* * *
18959167 ACAAGCCTTAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAATCCCACCTACCACCC
196 ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* * * * *
18959232 TATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCCGGCATAGTGC-CCACCCGCCCACTCGTT
261 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCCCACCCGCTCGTT
* ** * *
18959296 TCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTAT
326 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CAGACCAAGGGTTGT
** * * * * *
18959361 GATAGCAAGATCAGCAGCACACAGAGGAGGACCCGACTGATCCCCGGCTTG-GCATCCTGCCCCT
390 GGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACTGAT-CCCGACTTGCGCATCCTGCCCCT
* * * *
18959425 CTGGCCGGCTGAGCGCCCGCACGTTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCACA
454 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * * * * *
18959490 ATCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGGTTATGACAGCACAT
519 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGA-CGAAGGTTACGGCAGCACAT
* * *
18959555 TCTGGGCTCCGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGT
583 GCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGT
* * *
18959620 CGGAGAACCTGACCGGCGGCATTGGGGTTCCGGTGATCCGATTGGCC-GGGGGGTGTGCGCACAT
648 CGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGA-GGGCCGGGGGGGTGTGCGCACAT
*
18959684 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACATCGAGA
712 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* *
18959749 ACTCACA-CCCCTTAAAGAGCGTTTGAGATTTTACAGGTTTGCTGCCAGTAGGCCATTAAAGTGT
777 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTA-GCCATTAAAGTGT
*
18959813 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
841 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
* * *
18959866 TTTTAGCTGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGC
1 TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * * * *
18959931 CAAAACACCTTCTGAAAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTAAAAA
66 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
*
18959996 ATAGAAAACGAGTCGTCTTGCCAAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
131 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* * * * *
18960061 AAAAGCCTTAAAAATGGCATTGGCACAG-AGAAATTTGAAGATGTGCCGAAACCCACCTACCACC
196 ACAAGCCATAAAAATGGCATTGGCA-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * * *
18960125 CTATCGATCCATGGCTTGCGCATCCCGCCTCTTTGACCGGTGTAGTGCCCGCACGCCTGCCCGCC
260 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----G--CGCC-GCCCACC
* ** * * * *
18960190 CGCTTGTTTAATCGGTTGGCTTAGGCATACGAAGTTCATTTCTAGTCTAAGATCAGA-ATGGATC
318 CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACA--GACC
* * * * * * ** * *
18960254 GAGTGTGGCGGTAGCAGGATCGGTAGCACGCAGAGGGGGACCCGA-TCGATCCCCAGCTTGCGTA
381 AAGGGTTGTGGCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACT-GATCCCGA-CTTGCGCA
** * * * * *
18960318 TCCCACCCCTCTGGCCGGCTGAACGCCTGCACGCTCATTTTGTGGGTTGACTTAGGCATACGAAG
444 TCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAG
* * * * * * * *
18960383 TTTATTGCTAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCAGACCGAATCGATGGTTGC
509 TTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGA-CGAAGGTTAC
* * * ** * * *
18960448 GGCAACACATGCTGGGCTCGCGCATGTGCTGGTGCCGCATTTTTCTTCACCGAGGTACCATCGTC
573 GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCC
* * * * * * * *
18960513 GGAGCATCG-CAAGAGAACCTAACCGGTGACATTGGGGTTCTGGCAATCGGGGGGGTC-GGGGGG
638 GGAGCATCGTC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGAGGGCCGGGGGGG
* *
18960576 TGTGCACACATGATGTGTGATGGGTGCTGGTACTTGGCCC
701 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
18960616 GCATATAGAA
Statistics
Matches: 5284, Mismatches: 567, Indels: 314
0.86 0.09 0.05
Matches are distributed among these distances:
801 3 0.00
802 388 0.07
803 31 0.01
804 35 0.01
805 14 0.00
806 7 0.00
807 12 0.00
808 24 0.00
809 38 0.01
810 6 0.00
811 3 0.00
812 26 0.00
813 11 0.00
814 1 0.00
815 2 0.00
816 5 0.00
817 2 0.00
818 3 0.00
819 8 0.00
820 10 0.00
821 3 0.00
822 5 0.00
823 6 0.00
824 7 0.00
825 5 0.00
826 5 0.00
827 3 0.00
828 7 0.00
829 7 0.00
830 12 0.00
831 4 0.00
832 2 0.00
833 8 0.00
834 5 0.00
835 5 0.00
836 8 0.00
837 10 0.00
838 8 0.00
839 4 0.00
840 5 0.00
841 10 0.00
842 2 0.00
843 4 0.00
844 12 0.00
845 8 0.00
846 8 0.00
847 5 0.00
848 2 0.00
849 7 0.00
850 12 0.00
851 5 0.00
852 5 0.00
853 3 0.00
854 16 0.00
855 3 0.00
856 2 0.00
857 1 0.00
858 10 0.00
860 2 0.00
861 10 0.00
862 32 0.01
864 2 0.00
865 14 0.00
866 16 0.00
867 35 0.01
868 31 0.01
869 2 0.00
871 179 0.03
872 23 0.00
873 10 0.00
874 33 0.01
875 191 0.04
876 4 0.00
877 1 0.00
880 2 0.00
881 1 0.00
883 3 0.00
885 2 0.00
887 1 0.00
888 2 0.00
891 41 0.01
892 101 0.02
893 362 0.07
894 292 0.06
895 418 0.08
896 437 0.08
897 581 0.11
898 281 0.05
899 476 0.09
900 480 0.09
901 7 0.00
902 99 0.02
903 249 0.05
904 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (893 bp):
TTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAA
ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
ACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCGCCGCCCACCCGCTCGTT
TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACAGACCAAGGGTTGTG
GCAGCAGGATCGGCAGCACATAGAGGGGGACCCGACTGATCCCGACTTGCGCATCCTGCCCCTCT
GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACGAAGGTTACGGCAGCACATGCT
GGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGG
AGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGAGGGCCGGGGGGGTGTGCGCACATGATG
TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
ACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGT
Found at i:18956040 original size:26 final size:26
Alignment explanation
Indices: 18956004--18956056 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18955994 GTTGACTTAG
18956004 GCATACGGAGTTCATTCCGAGTCTAA
1 GCATACGGAGTTCATTCCGAGTCTAA
* *
18956030 GCATACGGAGTTCATTCCTAGTTTAA
1 GCATACGGAGTTCATTCCGAGTCTAA
18956056 G
1 G
18956057 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCGAGTCTAA
Found at i:18957707 original size:26 final size:26
Alignment explanation
Indices: 18957678--18957730 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18957668 TTTGACTTAG
18957678 GCATACGGAGTTCATTCACAGTCTAA
1 GCATACGGAGTTCATTCACAGTCTAA
*
18957704 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCACAGTCTAA
18957730 G
1 G
18957731 ATCAGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCACAGTCTAA
Found at i:18958607 original size:26 final size:26
Alignment explanation
Indices: 18958578--18958627 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
18958568 GACATAGGCA
*
18958578 TACGGAGTTCATTCACAGTCTAAGCG
1 TACGGAGTTCATTCACAGTATAAGCG
*
18958604 TACGGAGTTCATTCCCAGTATAAG
1 TACGGAGTTCATTCACAGTATAAG
18958628 ATCAGATCGG
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.28, C:0.22, G:0.22, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCATTCACAGTATAAGCG
Found at i:18959506 original size:26 final size:26
Alignment explanation
Indices: 18959470--18959522 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18959460 GTTGACTTAG
18959470 GCATACAGAGTTCATTCACAATCTAA
1 GCATACAGAGTTCATTCACAATCTAA
* *
18959496 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCACAATCTAA
18959522 G
1 G
18959523 ATCAGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.34, C:0.25, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCACAATCTAA
Found at i:18962948 original size:26 final size:26
Alignment explanation
Indices: 18962908--18962960 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18962898 TACTTGGCCC
18962908 GCATACGGAAATCATTCCCAGTCTAA
1 GCATACGGAAATCATTCCCAGTCTAA
**
18962934 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAAATCATTCCCAGTCTAA
18962960 G
1 G
18962961 ATTGAACTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACGGAAATCATTCCCAGTCTAA
Found at i:18963103 original size:244 final size:245
Alignment explanation
Indices: 18962683--18963152 Score: 658
Period size: 244 Copynumber: 1.9 Consensus size: 245
18962673 GTTTATTGCT
*
18962683 AGTCTAAGAATATGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTACGGCAGCACA
1 AGTCTAAGAATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTACGGCAGCACA
** * * *
18962748 TGCTGGGCTCGTGCATGTGCTGGGGCCGCATTTTTCTTTATCGGGGCACCATCACCGGAGCATCG
66 TGCTGGGCTCAAGCATGTGCTGGGGCCACATTTTTCTTCATCGGGGCACCATCACCGAAGCATCG
**
18962813 CAAGAGAACCTGACCGGTGACATTGGGGTTCCGACAATCAGGGGGGTC-GGAGGGGTGTGCGCAC
131 CAAGAGAACCTGACCGACGACATTGGGGTTCCGACAATCAGGGGGGTCGGGAGGGGTGTGCGCAC
18962877 ATGATGTGTGATGGGTGCTGGTACTTGGCCCGCATACGGAAATCATTCCC
196 ATGATGTGTGATGGGTGCTGGTACTTGGCCCGCATACGGAAATCATTCCC
* * * * *
18962927 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-TGAACTGGA-CTGAGGGTTACGGTAGCA
1 AGTCTAAGAATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGAATC-GAGGGTTACGGCAGCA
* * **
18962990 CATGCTGGGCTCAAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGAAGCAT
64 CATGCTGGGCTCAAGCATGTGCTGGGGCCACATTTTTCTTCATCGGGGCACCATCACCGAAGCAT
* ** * * * * * *
18963055 TGCCGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGGGGTCGGGGGGGGTGTGCGC
129 CGCAAGAGAACCTGACCGACGACATTGGGGTTCCGACAATCAGGGGGGTCGGGAGGGGTGTGCGC
*
18963120 ACATGATGTGTGATGGGTGCTGGTGCTTGGCCC
194 ACATGATGTGTGATGGGTGCTGGTACTTGGCCC
18963153 TTATATTGGC
Statistics
Matches: 196, Mismatches: 27, Indels: 5
0.86 0.12 0.02
Matches are distributed among these distances:
243 2 0.01
244 149 0.76
245 45 0.23
ACGTcount: A:0.20, C:0.23, G:0.34, T:0.24
Consensus pattern (245 bp):
AGTCTAAGAATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAATCGAGGGTTACGGCAGCACA
TGCTGGGCTCAAGCATGTGCTGGGGCCACATTTTTCTTCATCGGGGCACCATCACCGAAGCATCG
CAAGAGAACCTGACCGACGACATTGGGGTTCCGACAATCAGGGGGGTCGGGAGGGGTGTGCGCAC
ATGATGTGTGATGGGTGCTGGTACTTGGCCCGCATACGGAAATCATTCCC
Found at i:18964784 original size:26 final size:26
Alignment explanation
Indices: 18964754--18964809 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
18964744 TGGGTTGACT
18964754 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
*
18964780 TAAGCATACGGAGTTCTTTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
18964806 TAAG
1 TAAG
18964810 ATCAGACCGG
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.25, G:0.20, T:0.29
Consensus pattern (26 bp):
TAAGCATACGGAGTTCATTCCCAGTC
Found at i:18965699 original size:26 final size:26
Alignment explanation
Indices: 18965644--18965699 Score: 76
Period size: 26 Copynumber: 2.2 Consensus size: 26
18965634 TAGGTTGACT
* * * *
18965644 TAAGCATACGGAGTTCATTCCTAGTT
1 TAAGCATACGAAGTTCATTCCCAATC
18965670 TAAGCATACGAAGTTCATTCCCAATC
1 TAAGCATACGAAGTTCATTCCCAATC
18965696 TAAG
1 TAAG
18965700 TTTGGACTGG
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.21, G:0.16, T:0.30
Consensus pattern (26 bp):
TAAGCATACGAAGTTCATTCCCAATC
Found at i:18966576 original size:26 final size:26
Alignment explanation
Indices: 18966540--18966592 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18966530 GTTGACTTAG
*
18966540 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
18966566 GCATACAGAGTTCATTCCGAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
18966592 G
1 G
18966593 ATCGGATGGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:18967794 original size:899 final size:895
Alignment explanation
Indices: 18962908--18968329 Score: 6883
Period size: 899 Copynumber: 6.0 Consensus size: 895
18962898 TACTTGGCCC
** *
18962908 GCATACGGAAATCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-TGAACTGGA
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCTGATC-GGA
* * * **
18962972 CTGAGGGTTACGGTAGCACATGCTGGGCTCAAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGG
65 CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGG
* * * *
18963037 GCACCATCGTCGAAGCATTGCCGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGGG
130 GCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGG
* * *
18963102 GTCGGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTGCTTGGCCCTTATATTGGCCCCC
194 G-C-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* *
18963167 TGTCCCTCATCAAACCTCGAGAACTCACACCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGC
257 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* * *
18963232 TGCCAGTAGCCATTCAAGTGTCTGAAATTGGGACACTTCTTTCAAATGGTCACAAAATCTTGTAC
322 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
*
18963297 ACTTCGAGTTTTTAGCTGAAAAT-TTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCA
387 ACTTCGAGTTTTTAGCTG-AATTGTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCA
* * * * * **
18963361 AGTTTGGGGCTAAAACTCCTTCCGAAAAAATTTAAAAAAAATCCCGAATCGTAAAAATTTTTTAA
451 AGTTTGGGGCCAAAACTCCTTTC-AAAAAATTT-TAAAAAATCCCGAACCGTAAAAAGTTTCAAA
* *
18963426 AATCATGAAAAAGA-AAGAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
514 AATCATGAAAAATAGAA-AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
* *
18963490 TTGTCTGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACC
578 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA--CAAAAATATGAAGATGTGCCTAAACC
* * * *
18963555 CACCTACCACCCTATCGATCCACAGCTTGTGCATCCCGTCTCTCTGGCAG-GTGTAGTGCCCGCA
641 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACT-TAGTG--C-C-
* *
18963619 CGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGAT
701 CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
** * * * * * * * *
18963684 CAGAATGGATCGAGTGTT-CTGGTAGCAGGAT-TGATAGCACATAGAGGGGGACCCGATCGATCC
766 CAGACCGAACCGAGGGTTGC-GGCAGCAGGATCAG-CAGCACGTAGAGGGGGACCCGACCGATCC
* * * * *
18963747 CCGGCTTGTGCATCCCACACCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTT
829 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGT-GG-T---TT
18963812 AGGCACCATCGCCGGAGCATCAGCGG
889 --G-A-C-T----------T-A---G
* ** *
18963838 AGAACTTGATCGACAGCATTGGGGTTCATTCCCAGTCTAAGCATACATAGTTCATTCCTAGTCTA
1 -G--C---AT----A-C---GGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTA
* * * *
18963903 AGATCGGATC-GAGCTGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTAGTGCCACAT
52 AGATCTGATCGGA-CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACAT
* * * * * * * *
18963967 TTTTCTTCTTCGGGGTACCATCGTTGGAGCATTGTCGGAAAACTTGACCGGCGGCATTGGGGTTC
116 TTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTC
** * *
18964032 CGGTGATCGAGGGGGCCGAGGGGTGTGCGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCC
181 CGACGATCG-GGGGGCCG-GGGG-GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* *
18964097 TTATATTGGCCCCCTGTCCCTCATCAAACCCCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
243 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
18964162 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
308 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
* * * *
18964227 ACAAAATCTTGTACACTTCCAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAGTACATGG
373 ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGG
** * * *
18964292 ATCACT-TCTACCAAGTTTGGGGTGAAAACTCCTTCTGAAAAAATTTTACAAAATCTCGAACCGT
438 ATCA-TGTCTACCAAGTTTGGGGCCAAAACTCCTT-TCAAAAAATTTTAAAAAATCCCGAACCGT
* *
18964356 AAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGATGG
501 AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
*
18964421 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGAAGGCAAAAATATGAAGA
566 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA--CAAAAATATGAAGA
* * * *
18964486 TGTGCCTAAACACACCTACCACCCTCTCAATCCACGACTTGCGCATCCCGTCTCTCTGGCCGACG
629 TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGAC-
* *
18964551 TT-GTGCCCGCCCGCCCGCCTGCCCGCTCGTTTCGTCGGTTGGCGTAGGCATACGAAGTTCATTC
693 TTAGTGCCCGCCCG--C-CC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * * **
18964615 CCAGTCTAAGATCAGACCAAACCGAAGGTTGTGGCAGCAGGATCAGTAGCATTTAGAGGGGGACC
754 CCAGTCTAAGATCAGACCGAACCGAGGGTTGCGGCAGCAGGATCAGCAGCACGTAGAGGGGGACC
* * ** * *
18964680 C-AGCCGATCCCTGGCTTGCCCATTGCGCCCCTCTAGCCGGCTGAGCGCCCGCACGCTCGTTTCA
819 CGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
* *
18964744 TGGGTTGACTTAA
883 TGGTTTGACTTAG
* * *
18964757 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCTTTCCCAGTCTAAGATCAGACCGGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCTGATCGGAC
* * **
18964822 CGAGGGTTGCGGCAGCACTTGCTGGGCTCGGTCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGG
66 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
*
18964887 CACCA---TC---G--T---CGGAGAACCT-ATCCGACGGCATTGGGGTTCCGACGATCAGGGGG
131 CACCATCGTCGGAGCATCGCCGGAGAACCTGA-CCGACGGCATTGGGGTTCCGACGATCGGGGGG
* *
18964940 CC-GGGGGTGTGCGCACATGATGTCCGATGGGTGCTTGTACTTGGCCCTTATATTGGCCCCCTAT
195 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* *
18965004 CCCTCATCAAACCTTGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
260 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* * *
18965069 CAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACTAAATCTTGTACAGT
325 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * * *
18965134 TTGAGTTTTTTGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGTTCATGTCTACGAAGTT
390 TCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTT
* * * * *
18965199 TGGGGCCAAAAATCCTTCCAAAACAATTTTCAAAAATCCCGAACTGCAAAAAGTTTCAAAAAT-A
455 TGGGGCCAAAACTCCTTTCAAAA-AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA
* *
18965263 GTGAAAAATAAAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
519 -TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* *
18965328 TGAATTTACAAGCCATAAAAATGGCATTGCCACGTAGAAATATGAAGATGTGCCTAAACCCACCT
583 TGAATTTACAAGCCATAAAAATGGCATTGGCAC--AAAAATATGAAGATGTGCCTAAACCCACCT
* * * * *
18965393 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTTTCTCTAGCTG-GTGTAGTGCCTGCCCGCCC
646 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACT-TAGTGCCCGCCCG-CC
* * * * * *
18965457 ACCCACTCACTCATTTCGTCAGTTGGCCTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGAC
709 -CGC-C-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
* * * * ** * * *
18965522 TGAACTGAGGGTTGTGGCAGCAAGATTGGCAGCATGCAGAGGGGGACCC-AGTCGATCCCCGGCT
771 CGAACCGAGGGTTGCGGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGA-CCGATCCCCGGCT
* ** * * * *
18965586 TGCGTATCCTACCCCTCTGGACGACTGAGCACCCGCACGCTCGTTTCGTAGG-TTGACTTAA
835 TGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGT-GGTTTGACTTAG
* * * * *
18965647 GCATACGGAGTTCATTCCTAGTTTAAGCATACGAAGTTCATTCCCAATCTAAG-TTTGGA-CTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCT-GATC-GG
* * * ** *
18965710 ACTGAGGGTTGTGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCGG
64 ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGG
* * * * * * ** *
18965775 GGCACTATCGCCGGAACATCGTCGGAGAACCTGACCGGCGACATTACGGTTCCGATGATCGGGGG
129 GGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGG
* *
18965840 GCCGGGGGGTGTGTGCACATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
194 GCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* * * * *
18965905 TCCCTCATCAAACCTCGAGAACTCACGCCCCCTTAAACAGAATTTGAGATTTTGCTGGTTTGCTG
259 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
18965970 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
324 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * * *
18966035 TTCGACTTTTTAGTTGAATT-TTTTATGCATGCCAA-AACAAATACAAGAATCACGTCTACCAAG
389 TTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAA-AAATACAAGGATCATGTCTACCAAG
* * *
18966098 TTTGGGGCCAAAACACCTTCTGAAAAAATTTAAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
453 TTTGGGGCCAAAACTCCTT-TCAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
** *
18966163 TGTGAGAAATA-AAAAGCGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
517 CATGAAAAATAGAAAA-CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
*
18966227 TATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACTCAC
581 TATGAATTTACAAGCCATAAAAATGGCATTGGCACA-A-AAATATGAAGATGTGCCTAAACCCAC
* * *
18966292 CTACCACCCTATCAATCCACGGCTTGCGCATCCCATCTCTCTGGCCGACGTAGT----GCCCGCC
644 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACTTAGTGCCCGCCCGCC
* * * * * *
18966353 CGCCTGCTCATTTCGTCGGTTAGCTTAGGCATACGGATTTCATTCCCAGTCTAAGATTAGATC-A
709 CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA
* * * * * *
18966417 GACCGAGGGTTACGGTAGTAGGATCAACAGCATGTAGAGGGGGACCCGACCGATCCTCGGCTTGC
774 -ACCGAGGGTTGCGGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGC
* * * * * *
18966482 GCATCCCGACCCTCTGGCCGGTTGAACACCCGCACGCTCATTTCGTGGGTTGACTTAG
838 GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGTTTGACTTAG
* * * *
18966540 GCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCGAGTCTAAGATCGGATGGGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCTGATCGGAC
* * * *
18966605 CGAGGGTTGCAGCAGCACATACTGGGCTCGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGAGG
66 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
* * * ** *
18966670 CACCATCGTTGAAGCATCGCCGGAGAACCTGACTGGTGGCATTGGGGTTCCGGCGATCGGGAGGG
131 CACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG-GGG
* *
18966735 CCGGGGGGTGTGCGCACAAGATGTGCGATTGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
195 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* *
18966800 CCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGC
260 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
*
18966865 CAGTAGCCATTAAAGTGTCTGAAATGTGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
325 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
18966930 TTGAGTTTTTGGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTT
390 TCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTT
* *
18966995 TGGGGCCAAAACTCCTTTCAAAAATATTTTGAAAAATCCC-ACACCGTAAAAAGTTTTAAAAATC
455 TGGGGCCAAAACTCCTTTCAAAAA-ATTTTAAAAAATCCCGA-ACCGTAAAAAGTTTCAAAAATC
* *
18967059 GTGAAAAATAGAAAACGAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
518 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* *
18967124 TGAATTTAAAAGCCATAAAAATGGTATTGGTGCACAAAAATATGAAGATGTGCCTAAACCCACCT
583 TGAATTTACAAGCCATAAAAATGGCATT-G-GCACAAAAATATGAAGATGTGCCTAAACCCACCT
* *
18967189 ACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGACTTAGTGCCCGCCCGTCCG
646 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACTTAGTGCCCGCCCGCCCG
* *
18967254 CCCGCTCGTTTCGTCGATTCGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAAC
711 CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAAC
* *
18967319 CGAGGGTTGCAGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGACCGATCCCCGG-TTACGCA
776 CGAGGGTTGCGGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCA
* *
18967383 TCCCGCCCCTCTGGCCAGCTGAGCGCCCGCACGCTTGTTTCGTGGTTTGACTTAG
841 TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGTTTGACTTAG
* * * *
18967438 GTATATGGAGTTCATTCCTAGTCTAAGCATACGGAATTCATTCCCAGTCTAAGATCTGATCGGAC
1 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCTGATCGGAC
* * *
18967503 CGAGGGTTGTGGCAGCACATGCTAGGCTCGGGCATGTGCTAGTGCCACATTTTTCTTCGTCGGGG
66 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
** * * * * * *
18967568 CACCATCAACGGAGCGTAGCCAGAGAACCTGACCGATGGCATTGAGGTTTCGACGATCGGAGGGG
131 CACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG-GGGG
* * *
18967633 CCGGGGGGGTGTTCGCACATGATGTACGATTGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
195 CC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* * *
18967698 TCCCTCATCAAACCTGGAGAACTCACACCCCCTTAAAGAGTATTTGAGATTTTACAAGTTTGCTG
259 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * * *
18967763 CCAGTAGCAATTAAAGTGTCTGAAATGTGGACAATTTTCTCAAATGGTCACAAAATCTTGTACAC
324 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* *
18967828 TTCGAGTTTTTGGCTGAATTGTTTTGTACATGCCAACAAAAATACAAGGATCATGTCTACCAAGT
389 TTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGT
* * * *
18967893 TTGGGGCCAAAACTCCTTTCGAAAATATTTTGAAAAATCCCGCACCATAAAAAGTTTCAAAAATC
454 TTGGGGCCAAAACTCCTTTC-AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
* * *
18967958 ATGAAAAATAGAAAACGAGTCGTCTTGCTAGGAAGCTTCACGTGAAGGCTTAAGGGACCATTGTA
518 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
*
18968023 TGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCT
583 TGAATTTACAAGCCATAAAAATGGCATTGGCA--CAAAAATATGAAGATGTGCCTAAACCCACCT
* * *
18968088 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCG
646 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACTTAGTGCCCGCCCGCCCG
* **
18968153 CCCGCTCGTTTCGTCGGTTCGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGAAC
711 CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAAC
* * * * **
18968218 CAAGGGTTGCAGCAGCAGGATCAGTAGCACGCAGAGGGGGACCCGACCGATCCCC-AATTGCGCA
776 CGAGGGTTGCGGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCA
* * * * * *
18968282 TCCCGACCCTCTCGCCAGCTGAGGGCCTGCACGCTCGTTTTGTGGTTT
841 TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGTTT
18968330 ATGGGGTTCC
Statistics
Matches: 3958, Mismatches: 442, Indels: 214
0.86 0.10 0.05
Matches are distributed among these distances:
888 4 0.00
889 13 0.00
890 716 0.18
891 6 0.00
892 3 0.00
893 309 0.08
894 242 0.06
895 251 0.06
896 10 0.00
897 14 0.00
898 223 0.06
899 757 0.19
900 11 0.00
901 285 0.07
902 200 0.05
905 110 0.03
906 2 0.00
908 1 0.00
909 1 0.00
913 2 0.00
916 1 0.00
918 1 0.00
922 1 0.00
923 1 0.00
931 1 0.00
933 2 0.00
934 1 0.00
935 1 0.00
936 3 0.00
938 2 0.00
939 6 0.00
940 2 0.00
941 3 0.00
942 6 0.00
943 342 0.09
944 420 0.11
945 5 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (895 bp):
GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCTGATCGGAC
CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
CACCATCGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGC
CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
AGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
CGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTT
GGGGCCAAAACTCCTTTCAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATG
AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGA
ATTTACAAGCCATAAAAATGGCATTGGCACAAAAATATGAAGATGTGCCTAAACCCACCTACCAC
CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACTTAGTGCCCGCCCGCCCGCCCGC
TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGG
GTTGCGGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGTTTGACTTAG
Found at i:18969924 original size:26 final size:26
Alignment explanation
Indices: 18969872--18969924 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18969862 GTTGGCTTAG
* *
18969872 GCATATGGAGTTCATTCCCAATTTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
18969898 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
18969924 G
1 G
18969925 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:18970499 original size:26 final size:26
Alignment explanation
Indices: 18970448--18970499 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
18970438 TTGACTTAGC
* *
18970448 CATACGGAGTTCATTCCCAGTTTAAG
1 CATACGGAGTTCATTCCCAATATAAG
18970474 CATACGGAGTTCATTCCCAATATAAG
1 CATACGGAGTTCATTCCCAATATAAG
18970500 ATCAGACCAG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.23, G:0.17, T:0.29
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAATATAAG
Found at i:18971352 original size:26 final size:26
Alignment explanation
Indices: 18971312--18971364 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18971302 GTTGACTTAG
*
18971312 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
*
18971338 GCATACGGAGCTCATTCCTAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
18971364 G
1 G
18971365 ATCGGACGGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:18972484 original size:26 final size:26
Alignment explanation
Indices: 18972447--18972499 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18972437 GTTGACTTAG
*
18972447 GCATACGGAGTTAATTCCCAGTCTAA
1 GCATACGAAGTTAATTCCCAGTCTAA
*
18972473 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTAATTCCCAGTCTAA
18972499 G
1 G
18972500 GTCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTAATTCCCAGTCTAA
Found at i:18973407 original size:26 final size:26
Alignment explanation
Indices: 18973350--18973408 Score: 68
Period size: 26 Copynumber: 2.3 Consensus size: 26
18973340 TTGACTTATT
*
18973350 TACGGAGTTCATTCCCAGTCCAAGCA
1 TACGGAGTTCATTCCCAGTCCAAGAA
*
18973376 TACGGAGCTTCATT-CCAGTCTAATGAA
1 TACGGAG-TTCATTCCCAGTCCAA-GAA
18973403 T-CGGAG
1 TACGGAG
18973409 AACCGAGGGT
Statistics
Matches: 29, Mismatches: 2, Indels: 4
0.83 0.06 0.11
Matches are distributed among these distances:
26 20 0.69
27 9 0.31
ACGTcount: A:0.27, C:0.25, G:0.22, T:0.25
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCCAAGAA
Found at i:18976030 original size:25 final size:25
Alignment explanation
Indices: 18976002--18976051 Score: 82
Period size: 25 Copynumber: 2.0 Consensus size: 25
18975992 TTCACTTAGG
* *
18976002 CATACGGAGTTTATTCCCAGTCTAA
1 CATACGAAGTTCATTCCCAGTCTAA
18976027 CATACGAAGTTCATTCCCAGTCTAA
1 CATACGAAGTTCATTCCCAGTCTAA
18976052 GATCGGACTG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.30, C:0.26, G:0.14, T:0.30
Consensus pattern (25 bp):
CATACGAAGTTCATTCCCAGTCTAA
Found at i:18976940 original size:26 final size:26
Alignment explanation
Indices: 18976904--18976956 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18976894 GTTGACTTAG
18976904 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
18976930 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCTAGTCTAA
18976956 G
1 G
18976957 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCTAGTCTAA
Found at i:18977831 original size:25 final size:26
Alignment explanation
Indices: 18977802--18977854 Score: 81
Period size: 25 Copynumber: 2.1 Consensus size: 26
18977792 TGTTTTGGCT
**
18977802 TAAGCATACGGAGTTCATTC-CAGTC
1 TAAGCATACAAAGTTCATTCTCAGTC
18977827 TAAGCATACAAAGTTCATTCTCAGTC
1 TAAGCATACAAAGTTCATTCTCAGTC
18977853 TA
1 TA
18977855 TGATTGGACC
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 18 0.72
26 7 0.28
ACGTcount: A:0.32, C:0.23, G:0.15, T:0.30
Consensus pattern (26 bp):
TAAGCATACAAAGTTCATTCTCAGTC
Found at i:18977844 original size:900 final size:901
Alignment explanation
Indices: 18975135--18982145 Score: 8906
Period size: 903 Copynumber: 7.9 Consensus size: 901
18975125 AGGCATACGG
* * * *
18975135 AGTTCATTCCCAGTCTAAGATCGGACCAAACCGAGGGTTACGATAGCACGTGCTGGGCTC-GAGC
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCAG-GC
* * * * * * *
18975199 ATGTACT-GTGCCACATTTTTCTTCGTCAGGGAACCATTGCCGAAGCATCG-CTGGAGAACCTGA
65 ATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTC-GGAGAACCTGA
* *
18975262 CCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCAATGG
129 CCGACGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGG
18975327 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
193 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
*
18975392 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGCG-
258 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG-GA
18975456 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTGCAT
322 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAT
* *
18975520 GCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTT
387 GCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTT
*
18975585 AAAAAATCTCAAACCGTAAAAAGTTT-GAAAATCGTG-AAAATAGAAAACGAGTCGTCTTGCCAT
452 AAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
* ** *
18975648 GAAACTTCCCGTGAAGGCTTAAGGGATGATTGTATGAATTTACAAGCCATAAAAATGGAATTGGC
517 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
* * * * * *
18975713 ACGTAAAAATATGAAGATGTGCCAAAACCCGCCTACCAACCTATCGATCCACAGCTTGCGCATCC
582 ACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* * * * * * *
18975778 CGTCTCTCTGGCCGACATACTGCCCACCCGTCTGCCCGCCCGCTCGTTTCGTTGCTTGGCTTAGG
647 CGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* *
18975843 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATTGGTAG
712 CATACGGAGTTCATTCCCAGTCTAAGAT-AGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAG
* * * * * * *
18975908 CACACAGAGGGCGACCCGACCGATCCCCGGCTTGCGCATCATGCCCTTCTGGCCGACTGAGCGCC
776 CACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCC
** * * *
18975973 CGCACGCTTGTTTCGTGGGTTCACTTAGGCATACGGAGTTTATTCCCAGTCTAA-CATACGA
841 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCAGTCTAAGCATACAA
** ** * * **
18976034 AGTTCATTCCCAGTCTAAGATCGGACTGGAAAGAGGGTTGCGATAGCACATGCTCGGCTTGGGCA
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
* * * * **
18976099 TGTGCTGGTGCAGCATTTTTCTTCATCGGGGCACCATCGTC-GAGCACCGTCGGAGAACTTGATA
66 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC
** * *
18976163 GGTGGCATTGGGGTTCCGGCGATCGAGGGGGCCGGGGGGGCTGTGCGCACATGATGTGCAATAGG
131 GACGGCATTGGGGTTCCGGCGATCG-GGGGGCCGGGGGGG-TGTGCGCACATGATGTGCGATGGG
* *
18976228 TGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCT
194 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
*
18976293 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACA
259 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
*
18976358 CGTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
324 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* * * *
18976423 CAACGAAAATACAAGGATCACGTTTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTGA
389 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAA
* * *
18976488 AAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
454 AAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
18976553 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAATGGCATTGGCA
519 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAAATGGCATTGGCA
* * * * *
18976618 CACAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGACTTGCTCTTCCC
583 CGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * * * * * *
18976683 ATCTCTCTGGTCGG-AGTAGTGCCCACCTGCCCACCCGCCCGCTCGTTTCTTCTGTTGGCTTAGG
648 GTCTCTCTGGCCGGCA-TAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * ** * * **
18976747 CATACGGAGTTCATTCCCACTCTAAGATCTGACCAGATGGAGGGTTGTGGCAGCAAGATCAACAG
712 CATACGGAGTTCATTCCCAGTCTAAGAT-AGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAG
* * ** * *
18976812 CACGGAGAGGGGGACCCGACCGATCCTTGGCTTGCGCATCC-CCCCCTCTGGCCGGCTGAGCGCC
776 CACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCC
* * **
18976876 CGTACCCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGG
841 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC-AGTCTAAGCATACAA
* * * *
18976938 AGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTGTGACAGCACATGCTGCGCTCAGGCA
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
* *
18977003 TGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACT
66 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC
* * * * *
18977068 GAAGGCATTGGGGTTCTGGTGATCGGGGGAGCC-GGGGGGTGTGCACACATGATGTTCGATGGGT
131 GACGGCATTGGGGTTCCGGCGATCGGGGG-GCCGGGGGGGTGTGCGCACATGATGTGCGATGGGT
18977132 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTT
195 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* *
18977196 AAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGATAC
260 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
18977261 TTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTATGCATGCC
325 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* ** * *
18977326 AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGAACAAAATTCCTTCTG-AAAAATTTTAAA
390 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
** * *
18977390 AAATCTCGAACCACAAAAAGTTTCGAAAGTCGTAAAAAATAGAAAACGAGTCGTCTTGCCATGAA
455 AAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* * * *
18977455 ACTTAACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCTTTGGCATG
520 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
* * * * *
18977520 TAGAAATATGAAGATGTGGCTAAACCCACCTACCATCCTATCGATTCACGGCTTGCGCATCCTGT
585 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * * *
18977585 CTCTCTGGCCGGTATAGTGCCCGCCCACCCACCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCAT
650 CTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCAT
* * * *
18977650 ACGGAGTTCATTCCCAGTCTAAGAGTGGACTAGACCGAGGGTTGTGGCAGTAGGATCGGCAGCAC
715 ACGGAGTTCATTCCCAGTCTAAGA-TAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCAC
* * * * ** *
18977715 TCAGAGGGAGACCC-AGTCGATCCCCGGCTTGCCCATCCTGCCCCTCTGGCTGGCTGAGCACCCT
779 GCAGAGGGGGACCCGA-TCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCCCG
* * ** * *
18977779 TACGCTCATTTCATGTTTTGGCTTAAGCATACGGAGTTCATTCCAGTCTAAGCATACAA
843 CACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCAGTCTAAGCATACAA
* * *
18977838 AGTTCATTCTCAGTCTATGATTGGACC-GAACCGAGGGTTGCGACAGCACATGCTGGGCTC-GAG
1 AGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGACAGCACATGCTGGGCTCAG-G
** * *
18977901 CATGTGCTGGTGCCATATTTTTCGTCGTCGGGGCACCATCGTCGGAGCATCGTCGAAGAACCTGA
64 CATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGA
* * * * * ** *
18977966 CCGCCAGCCTTGAGGTTCTGATGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGACGGG
129 CCGACGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
* * * *
18978031 TGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTTGACAATTCACACCCCCT
194 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* * * *
18978096 TAAAGAGAATTTAAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATCGGGACA
259 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * * * * * *
18978161 GTTTTTTCAAATGGTAACAAAATCTTATACACTTCAATTTTTTAGCAGAATTTTTTTTTGCATGC
324 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* * *
18978226 CAATAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAAATTTTA
389 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-GAAAAAATTTTA
* * *
18978291 AAAAATTTCTAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
453 AAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
* *
18978356 AAACTTGACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGAA
518 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * *
18978421 CGAAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTTGCGCATCCC
583 CGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * * * * * * *
18978486 ATCTCTCTGGTCGACGTAGCG-CCGTCCGCCCGCCCCCCCGTTCGTTTCGTCGGTTGGCTTAGGC
648 GTCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * ** * * *
18978550 ATACAGAGTTCATTCCCAGTCTAAGATTGGACTGGACTGAGGGTTGCGGTAGGAGGATCGGCAGC
713 ATACGGAGTTCATTCCCAGTCTAAGA-TAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGC
* * *
18978615 ACGCAGAGGGGGACCCAACCGATCCCCGGCTTACGCATCCTGCCCCTCTGGCCGGCTGAGTGCCC
777 ACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCCC
* * * *
18978680 GCACGCTCGTTTCATGGGTTGACTTAGTCATACGGAGTTCATTCCCAGTCTAAGCATACAG
842 GCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCAGTCTAAGCATACAA
* * * * * *
18978741 AGTTCATTCCCAGTCTAAGACCAGACCAGACCGAGGGTTGCGACAGCAAATGCTAGGCTTAGGAA
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
* * * * * *
18978806 TGTACTGCTGTCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACTTAACC
66 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC
* * * *
18978871 GACGGCATTGGGGTTCCGGTGATCGGGGGGCCAGGGGGGTGTACGCACATGATGTGTGATGGGTG
131 GACGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* *
18978936 ATGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAGCCCCTTA
196 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* *
18979001 AAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACT
261 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * * *
18979066 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATGTTTTAGTGCACGCCA
326 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * *
18979131 ACAAAAAGACAAGTATCACATCTACCAAGTTTGCGGCCAAAACTCCTTTCGAAAAAATTTTAAAA
391 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * * *
18979196 AATCTCGAATCGCAAAAGGTTTCCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
456 AATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * * * * *
18979261 CTTCAGGTGTAGGCTTAAGGTACCATTGTATGAATTCACAAGCCATAACAATGGCATTGGCATGC
521 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGC
* *
18979326 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCATGGCTTGCGCATCCCGTC
586 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * * ** * *
18979391 TCTCTAGCCGGCGTAGTGCCTGCCCGCTCGCCCGCGTGCTCGTTTCATTGGTTGGCTTAGGCATA
651 TCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
* * *
18979456 CGGAGTTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCCGCAGCAGGATCGACAGCAC
716 CGGAG-TTCATTCCCAGTCTAAGAT-AGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCAC
* ** * *
18979521 AG-AGAGGGGGACCCGATCGATCCCCTGCTTATGCAT-TTCGCCCTTCTGGCCGGCTGAGTGCCC
779 -GCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCT-GCCCCTCTGGCCGGCTGAGTGCCC
* * * *
18979584 GTACGCTCATTTCGTGGGTTGATTTAGGCATACGGGGTTCATTCC---C--AG--T-CTA
842 GCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCAGTCTAAGCATACAA
* * * **
18979636 AG---ATT---AGACT--GA----A-CTGA---A-GGTTGCG-TAGCACATGCTGGGCTTGGGCA
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
** * * *
18979683 TGTGCTGGTGTGGCATTTTTCTTCATCAGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGATC
66 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC
* * * * * *
18979748 GATGGGATTGGGGTTCCGAC-ATCGGGGGGCTGTGGGGGTTGTACGCACATGATGTGCGATGGGT
131 GACGGCATTGGGGTTCCGGCGATCGGGGGGCCG-GGGGGGTGTGCGCACATGATGTGCGATGGGT
*
18979812 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAGACCTCGAGAACTCACACCCCCTT
195 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* * *
18979877 AAAGAGCATTTGAGATTTTACAAGTTTGCTACCAGTAGCCATTAAAATGTCTGAAATGGGGACAC
260 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
18979942 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGACTTTTTTTGTGCATGCC
325 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * *
18980007 TACAAAAATACAGGGATCACGTCTACCATGTTTGGGGCCAAAACTCCTTCC-AAAGAAATTTTAA
390 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA-AAATTTTAA
* ** * *
18980071 AAAATCTGGAATGGTAAAAAGTTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATG
454 AAAATCTCGAACCGTAAAAAG-TTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
18980136 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
518 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * *
18980201 TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTACGCATCCC
583 CGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * * * * * * ** *
18980266 G--TCTCTGGCTGACGTAGTGCCTGCCCGCCAGCTCGCCCGCTTGTTTTATCGGTTAGCTTAGGC
648 GTCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* ** * * *
18980329 ATACGGAGTTCATTCCTAGTCTAAGATTAGACTGGACTGAGGGTTGTGGCAGTAGGATCGGCAGC
713 ATACGGAGTTCATTCCCAGTCTAAGA-TAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGC
* * ** * *
18980394 ACACAGAGGGGGACTCGATCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTTGAGTACCC
777 ACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCCC
* *
18980459 GCACACTCATATCGTGGGTTGAC-T-----TA--G-G--CA-T--A--C--AG-------
842 GCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCAGTCTAAGCATACAA
* * * *
18980494 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTTG-TAGGACATGCTGGGCTCGGGC
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTG-CGACAGCACATGCTGGGCTCAGGC
* ** *
18980558 ATTTGCTGGTGCCAAATTTTTCTTCGTC-GGG-------GT---ACCATCGTCGGAGAACCTGAC
65 ATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGAC
** * * *
18980612 CGGTGGCATTGGGGTTCCGACGATCAGGGGGGCCGGAGGGGTGTGCGCACATGATGTGCAATGGG
130 CGACGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
* * * *
18980677 TGCTGATACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCAAGAACTCACAGCCCCT
194 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* * * * * *
18980742 TAAAGAGCATTCGAGATTTTACAGGTTTGCTGTCAATAGCCATTAAAGTGTTTGGAATGGGCACA
259 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* *
18980807 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGACTTTTTTTGTGCATGC
324 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
*
18980872 CAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAA
389 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAA
* * * *
18980937 AAAAT-TTGAATCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGA
454 AAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* *
18981001 AACTTCCCGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
519 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAC
* ** *
18981066 ACAGAAATATGAAGATGTGCCTAAACCCATGTACCACCTTATCGATCCACGGCTTGCGCATCCCG
584 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* * * * *
18981131 TCTCTCTGGCCGGCGTA--G--CGCCCACCCGCCCG-CCACTCGTTTCGTCGGATGGCTTAAGCA
649 TCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * *
18981191 TATGGTGTTCATTCCCAATCTAAGATGAGA-CTGAACCGAGGGTTGCGGCAGCAGGATCGGCAGC
714 TACGGAGTTCATTCCCAGTCTAAGAT-AGACCAG-ACCGAGGGTTGCGGCAGCAGGATCGGCAGC
* * * * *
18981255 ACGCAGAGGGGGACCCGATCGATCCCCGGCTTACGCACCCCGTCCCTTTGGCCGGCTGAGTGCCC
777 ACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCCC
*
18981320 GCACG--C---TCGTGGGTTGACTTAGGCATACGGAGTTCATTCC---C--AG--T-CTA
842 GCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCAGTCTAAGCATACAA
*
18981367 AG---------A-TCT----T---ACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCT-AGGGC
1 AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCA-GGC
*
18981414 ATGTGCTGGTGCCGCATTTTTCTTCG-CTGGGGCACCA---TC-GAGCATC-CCGGAGAACCTGA
65 ATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGA
* * * *
18981473 CCGGCCGCATTGGGGTTCCAGCGATCGGGAGGG-CTGGGGGGTGTGCGCACATGATGTGCGATGG
129 CCGACGGCATTGGGGTTCCGGCGATCGGG-GGGCCGGGGGGGTGTGCGCACATGATGTGCGATGG
* *
18981537 GTGCTGGTACTTGGCCCTTATATTGGGCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCC
193 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
18981602 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
258 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
*
18981667 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATG
323 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * * ** *
18981732 CCTACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAAAATCCTTTTGAAAAAATTTAA
388 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
* * * * *
18981797 AAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAGCGAGTCGTCTTGCCATG
453 AAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
* * *
18981862 AAACTTCATGTGATGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
518 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * * *
18981927 CACAGAAATATGAAGATGTGCCTAAACTCACCTGCCTCCCTATCGATCCACGGCTTGCGCATCCC
583 CGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
*
18981992 GTCTCTCTGGCCGGCATAGTGCCCGCCCGCTCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
648 GTCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * * * *
18982057 ATACGGAGTTCATT-CCAGTCTAAGATCGACCGGACCTAGGGTTGCAGTAGTAGGATCGGTAGCA
713 ATACGGAGTTCATTCCCAGTCTAAGATAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCA
* *
18982121 CGCAGAGGGGGAACTGATCGATCCC
778 CGCAGAGGGGGACCCGATCGATCCC
18982146 TGGTGTCATG
Statistics
Matches: 5361, Mismatches: 648, Indels: 240
0.86 0.10 0.04
Matches are distributed among these distances:
855 2 0.00
856 68 0.01
857 4 0.00
858 2 0.00
859 2 0.00
860 2 0.00
861 414 0.08
862 237 0.04
863 9 0.00
864 175 0.03
865 103 0.02
866 315 0.06
867 50 0.01
868 3 0.00
869 5 0.00
870 1 0.00
871 3 0.00
873 2 0.00
874 2 0.00
875 127 0.02
876 114 0.02
877 368 0.07
878 170 0.03
879 1 0.00
882 3 0.00
883 1 0.00
887 2 0.00
889 4 0.00
892 3 0.00
895 3 0.00
896 1 0.00
898 3 0.00
899 117 0.02
900 668 0.12
901 440 0.08
902 573 0.11
903 859 0.16
904 461 0.09
905 44 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (901 bp):
AGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCAGGCA
TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC
GACGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
AATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGC
AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
TCTCTGGCCGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
CGGAGTTCATTCCCAGTCTAAGATAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGC
AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGTGCCCGCAC
GCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCAGTCTAAGCATACAA
Found at i:18978738 original size:26 final size:26
Alignment explanation
Indices: 18978708--18978759 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
18978698 TTGACTTAGT
*
18978708 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
18978734 CATACAGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
18978760 ACCAGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAAG
Found at i:18982029 original size:12 final size:12
Alignment explanation
Indices: 18982012--18982036 Score: 50
Period size: 12 Copynumber: 2.1 Consensus size: 12
18982002 CCGGCATAGT
18982012 GCCCGCCCGCTC
1 GCCCGCCCGCTC
18982024 GCCCGCCCGCTC
1 GCCCGCCCGCTC
18982036 G
1 G
18982037 TTTCGTCGGT
Statistics
Matches: 13, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 13 1.00
ACGTcount: A:0.00, C:0.64, G:0.28, T:0.08
Consensus pattern (12 bp):
GCCCGCCCGCTC
Found at i:18989604 original size:889 final size:887
Alignment explanation
Indices: 18987831--18990785 Score: 3722
Period size: 878 Copynumber: 3.3 Consensus size: 887
18987821 TGACACCTGG
* * * * * *
18987831 CTTGCGCGTCCCGCCACTCTGGCCGGCTGAGCGCCCGCATACTCGTTTCGTGGGTTGACTTAGGT
1 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCATTTCGTGGGTTGACTTAGGC
* * * *
18987896 ATATGGAGTTCATTCCCAATCTAAGCATACGTAGTTCATTCCCAGTCTAAGATCGGTCCAGACCG
66 ATACGGAGTTCATTCCCAATCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGT-CGGACCG
* * * *
18987961 ACGGGTTGCCAGCAGCACATGCTGGCCTCGGCCATGTGCTGGTGCCGCATTTTTCTCCGTCAGGA
130 A-GGGTTG-CGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GG-
* *
18988026 CACCATCGTCGGAGCATCGTCGGAGAACCTGACCGGCCGCATTGGGGTTCCGACGATCGGGGGGC
191 -------G--GCAGCATCGTCGGAGAACCTGACCGGCGGCATT-GGGTTCCGACGATCGGGGGGC
* * * *
18988091 CGGTGGGG-TGTGCTCACATGATGTGTGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTA
246 CGGGGGGGCTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* * * *
18988155 TCCCTCATCAAACCTCCAGAACTCACATCCCCTTAAAGAACATTTGAGATTTTACAAGTTTGCTG
311 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
** *
18988220 CCAGTAGCCATTAAAGTGTCCAAAATGGGGACACTTTTTTCAACTGGTCACAAAATCTTGTACAC
376 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * * *
18988285 TTCGAGTTTTTAGCTGAA-GTTTTTGTGCATGCCAAAAAAAATACAAGCATCACGTCTACGAAGT
441 TTCGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
* ** *
18988349 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA-ATCGAACCGTAAAAAGTTTCAAAAATCG
506 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAATACCGAACCGTAAAAAGTTTTGAAAATCA
*
18988413 TGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
571 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
18988478 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTA
636 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTA
* * *
18988543 CCACCCTATCGATCCACGGCATGCGCAACCCGTCTCTCTGGCTGACGTAGT----G--CCCGCCC
701 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCCCGCCC
* *
18988602 G--C--TCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGAACCAGA
766 GCCCGGTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCGGA
** * * * * *
18988663 CCAAGGGTTGCGGTAGCAGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCCCGA
831 CTGAGGGTTGCAGCAGCAGGATCGGCAGCACGCAAAGGGGGACCCAACCGATCCCGA
* * * * *
18988720 CTTGCGCATCCTGCCCCTCTGGTCGGCTGAACACCCGCACGCTTATTTCGTGGGTTGACTTAGGC
1 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCATTTCGTGGGTTGACTTAGGC
* *
18988785 ATACGAAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCG
66 ATACGGAGTTCATTCCCAATCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGG-TCGGACCG
18988850 AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCA
130 AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCA
*
18988915 GCATCG-CGGAGAACCTGA-CGGCGGCATTGGGTTCCGGCGATCGGGGGGCCTGGGGGGGCTGTG
195 GCATCGTCGGAGAACCTGACCGGCGGCATTGGGTTCCGACGATCGGGGGGCC-GGGGGGGCTGTG
18988978 CGCACATGATGTGCGATGGGTGCT-GTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAAC
259 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
18989041 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
324 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
18989106 AAGTGTCTGAAATGGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAG
389 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
18989171 ATGAATTTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTCGGGCCAAAA
454 CTGAATTTTTTTT-TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
** *
18989236 CTCCTTTTGAAAAAATTTTAAGAAATACCGAACCGTAAAAAGTTTTGAAAATCATAAAAAATAGA
518 CTCCTTCCGAAAAAATTTTAA-AAATACCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGA
* *
18989301 AGACGAGTTGTCTTGCCATGAAACTTCACAG-GAAGGCTTAAGGGACCATTGTATGAATTTACAA
582 AAACGAGTCGTCTTGCCATGAAACTTCAC-GTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* *
18989365 GCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCATATC
646 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * *
18989430 GATCCATGGCTTGTGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCAACCGCCCGCCCGGTC
711 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCC--CCGCCCGCCCGGTC
*
18989495 GTTTTGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCGGACTGAGGGT
774 GTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCGGACTGAGGGT
* *
18989560 TGCAGCAGCAGGATCGGCAGCACGCAAAAGGGGACCCAACCGATCCCCA
839 TGCAGCAGCAGGATCGGCAGCACGCAAAGGGGGACCCAACCGATCCCGA
* * * * * * *
18989609 GCTTACGCGTCCCGCCCCTCTGACCGGCTGAGCGCCCGCACCCTTATTTTGTGGGTTGACTTAGG
1 -CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCATTTCGTGGGTTGACTTAGG
*
18989674 CATACGGAGTTCATTCCC-A-GT---C-TA---AG---A-T----G----AGA-C--T-GGACCG
65 CATACGGAGTTCATTCCCAATCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGTCGGACCG
* * * *
18989714 AAGGTTGCGGCAACACATGCTGGGCTCCGGCATGTGCTGGTGCCTCATTTTTCTTCGTCGGGGCA
130 AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG--
* *
18989779 CCATCGTTGGAGCATCGTCGGAGAACCTGACCGACGACATTGGGTTTCCGACGATCGGGGGGGCC
193 ----C-----AGCATCGTCGGAGAACCTGACCGGCGGCATTGGG-TTCCGACGATC-GGGGGGCC
* *
18989844 GGGGGGGCTATGCGCACAT-ATGTGCGATAGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
247 GGGGGGGCTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
*
18989908 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGCTTTGCT-C
312 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
18989972 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
377 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * *
18990037 TCGAGTTTTTACCTGAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCATGTCTCCCAAGTT
442 TCGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
* *
18990102 TGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAATACCGAACCGTAAAAAGTTTTGAAAGTC
507 TGGGGCCAAAACTCCTTCCGAAAAAATTTT--AAAAATACCGAACCGTAAAAAGTTTTGAAAATC
* *
18990167 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTT
570 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * * * *
18990232 TAAATTTGCAAGCCATAAAAATGGCACTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCT
635 TGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCT
* * * * *
18990297 ACCACCCTATCGATCTACGGCTTGCACATCCCATCTCTCTGGCCGACGTGGTGCCCACCCTTCCG
700 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCC--CCG
* ** * *
18990362 CCCGCCCGCCCGCACGTTTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGA-TC
763 CCCGCCCG---G-TCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTG
* * * * * * * *
18990426 AGATCGGA-TCGAGGGTTACAACAGCAGGATCGACAACACACAAAGGGGGACCTAGCCGATCCCC
824 A-ACCGGACT-GAGGGTTGCAGCAGCAGGATCGGCAGCACGCAAAGGGGGACCCAACCGAT-CCC
18990490 GA
886 GA
* * * * *
18990492 CTTGCGCATCACGCCCGTTTGGCCAGCTGAGCACCCGCACACTCATTTCATGGGTTGACTTAGGC
1 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCATTTCGTGGGTTGACTTAGGC
* * * **
18990557 ATACTGAGTTTATTCCCAATCTAAGCATATGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCG
66 ATACGGAGTTCATTCCCAATCTAAGCATATGGAGTTCATTCCCAGTCTAAGATC-GGTCGGACCG
* * * * *
18990622 AGGGTTGCGACAGCACATGTTGGGCTCGGGCATGTACTGGTGCCACATTTTTCTTCGCCAGGCTC
130 AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GG---
* * * ** ** *
18990687 CCATCGCTAGAGCATCATCGGAGAACCTGACCGACGGCATTGAGGTTTAGGTGATCGGTGGGCC-
191 ----GGC---AGCATCGTCGGAGAACCTGACCGGCGGCATTG-GGTTCCGACGATCGGGGGGCCG
18990751 GGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTG
248 GGGGGGCTGTGCGCACATGATGTGCGATGGGTGCTG
18990786 CCAGTAGCCA
Statistics
Matches: 1800, Mismatches: 182, Indels: 151
0.84 0.09 0.07
Matches are distributed among these distances:
864 65 0.04
865 1 0.00
868 1 0.00
869 3 0.00
870 1 0.00
873 166 0.09
874 39 0.02
875 111 0.06
876 23 0.01
877 282 0.16
878 346 0.19
879 79 0.04
881 7 0.00
882 159 0.09
883 6 0.00
884 3 0.00
885 8 0.00
886 2 0.00
887 50 0.03
888 9 0.00
889 216 0.12
890 73 0.04
891 2 0.00
894 1 0.00
895 1 0.00
899 1 0.00
903 3 0.00
904 1 0.00
905 10 0.01
906 22 0.01
907 7 0.00
908 96 0.05
909 4 0.00
910 1 0.00
916 1 0.00
ACGTcount: A:0.25, C:0.26, G:0.24, T:0.25
Consensus pattern (887 bp):
CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCATTTCGTGGGTTGACTTAGGC
ATACGGAGTTCATTCCCAATCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGTCGGACCGA
GGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCAG
CATCGTCGGAGAACCTGACCGGCGGCATTGGGTTCCGACGATCGGGGGGCCGGGGGGGCTGTGCG
CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
GAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
CTTCCGAAAAAATTTTAAAAATACCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAAC
GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
ACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCCCGCCCGCCCGGTCGTTTTGT
CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACCGGACTGAGGGTTGCAGCA
GCAGGATCGGCAGCACGCAAAGGGGGACCCAACCGATCCCGA
Found at i:18992268 original size:26 final size:26
Alignment explanation
Indices: 18992231--18992283 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18992221 GTTGACTTAG
18992231 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
*
18992257 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
18992283 G
1 G
18992284 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCTAGTCTAA
Found at i:18993150 original size:26 final size:26
Alignment explanation
Indices: 18993114--18993166 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18993104 GTTGACTTAG
*
18993114 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
18993140 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
18993166 G
1 G
18993167 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:18994049 original size:26 final size:26
Alignment explanation
Indices: 18994013--18994065 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18994003 GTTGACTTTG
18994013 GCATACGGAGTGCATTCCCAGTCTAA
1 GCATACGGAGTGCATTCCCAGTCTAA
* *
18994039 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTGCATTCCCAGTCTAA
18994065 G
1 G
18994066 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTGCATTCCCAGTCTAA
Found at i:18995833 original size:26 final size:26
Alignment explanation
Indices: 18995797--18995849 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18995787 GTTGACTTAG
18995797 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18995823 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18995849 G
1 G
18995850 ATCGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:18996052 original size:886 final size:885
Alignment explanation
Indices: 18991365--18996457 Score: 6649
Period size: 892 Copynumber: 5.7 Consensus size: 885
18991355 GTTGACTTAG
* * * **
18991365 GCATACGGAGTTCATTCCCAGTCTAAGATCAGAACAGACCGAGGGTTATGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * *
18991430 CTCAGGCATGTGCTGGTGCCGTATTTTTCTTCGCTGGGGCACCATCGTCGGAGAACTTGACCGAC
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCAGAGCACCATC--CGGAGAACCTGACCGAC
* * * ** *
18991495 GGCATTAGGGTTCCAACGATCGGGGGCG-CTAGAGGGTGTGCGCACATGATGTGCGATGGGTGCT
129 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* **
18991559 GGTACCTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAAGTCGAGAACTCACACCCCCTTAAA
194 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
18991624 GAGCATTTGTGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
259 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
18991689 TTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTACCTGAATGTTTTTGAGCATGCCAAC
324 TTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAAT-TTTTTGTGCATGCCAAC
* * * * *
18991754 AAAAATACAAGGATCACATCTACCAAGTTTGGGCCCAAAACTACTTCTGAAAAAATTTTCAAAAA
388 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* ** *
18991819 TCCCAAACCATAAAAAGTTTGGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
453 TCCCAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * **
18991884 TCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTCCAAGCCATAAAAATGGCATTCTCATGCAG
518 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
* * *
18991949 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTTTCGATCCATGGCTTGC-AATTCCCGTCT
583 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA-TCCCGTCT
* *
18992013 CTCTGGCTGACGTAGTGCCCGCCCGCCTGCCCACCTGCTCGTTTCGTCGGTTGGCTTAGGCATAC
647 CTCTGGC-GGCGTAGTGCCCG--C-CC-GCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * *
18992078 GGAGTTCATTCCTAGTCTAAGATCAGATTGGATTGAGGGTTGCGG-TAGCAGGATCGACAGCACG
707 GGAGTTCATTCCCAGTCTAAGATCAGACTAGATTGAGGGTTGCGGCTAGCAGGATCGGCAGCACG
* * * * * * *
18992142 TAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGCCCCTCTAGCCGGCTGAGTGTCTGCA
772 TAGAAGGGGACCCGGCCGATCCCCGGCTTACGCAT-CCGCCCCTCTGGCCGGTTGAGCGCCCGCA
* * *
18992207 CGCTTATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCTAGTCTAA
836 CGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
18992257 GCATACGGAGTTCATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
18992322 CTCGGGCATGTGCTGGTGCCATATTTTTCTTCACCGGGGCACCATGCCGGAGAACCTGACCGACG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCAGAGCACCAT-CCGGAGAACCTGACCGACG
* *
18992387 GCATTGGGGTTCCGGCGATC-GGGGGGCCGTGGGGGGTGTGCGCACATGATGTGTGATGGGTGCT
130 GCATTGGGGTTCCGACGATCGGGGGGGCCG-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* * *
18992451 GGTACTTGACCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACACCTCCTTAAA
194 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
*
18992516 TAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
259 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* * * *
18992581 TTTCAAATGGTCACAAAATCTTTTACACATCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAA-
324 TTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAAC
* * * *
18992645 AAAAATTACAAGGATCACATCCACCAAGTTTGGGGCCAAAACGCCTTCCCAAAAAATTTTAAAAA
388 AAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * *
18992710 ATCCCGAA-CATCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCATCTTGCAATGAAA
452 ATCCCAAACCA-CAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* *
18992774 CTTCACGGGAAGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
516 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * * **
18992839 AGAAATATGATGATGTGCCTAAACCCACCTACCACCCTATCAATCTACGGCTTGCGCATCCCACC
581 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
*
18992904 TCTCTGGCTGGCGTAGT----GCCCGCCCGCC-GCTCGTTTCATCGGTTGGCTTAGGCATACGGA
646 TCTCTGGC-GGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * * * * *
18992964 GTTCATTCCCAGTCTAAGAT-TGAACT-GAATCGAGGGTTGCGAC-AGTAGGTTCGGTAGCACGC
710 GTTCATTCCCAGTCTAAGATCAG-ACTAG-ATTGAGGGTTGCGGCTAGCAGGATCGGCAGCACGT
* * * *
18993026 AGAGGGGGACCGGGTCGATCCCCGGCTTACGCATCCTGCCCCTCTAGCC-GTATGAGCGCCCGCA
773 AGAAGGGGACCCGGCCGATCCCCGGCTTACGCATCC-GCCCCTCTGGCCGGT-TGAGCGCCCGCA
*
18993090 CACTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 CGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
18993140 GCATACGGAGTTCATTCCCAATCTAAGATCGGACCGGATCAAGGGTTGCGGCAGCCCACGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
18993205 CTCGGGCATGTGCTAGTGCTGTATTTTTCTTCGTCGGGGCACCATCACCAGAGCATCACCGGGGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCG-C----CA-GAGCA-C----CAT--CCGGAGA
* * * * ** *
18993270 ACCTGACTGGCGGCATTGGGGTTCCGATGATCAGGCTGGCTGAGGGGGGTGTGCGCACATGATGT
118 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCG-GGGGGGTGTGCGCACATGATGT
* *
18993335 GCGATGGGTGCTGGTGCTTGGCCC-TATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCA
182 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
18993399 CACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAA
247 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
18993464 TGGGGACACTTTTTTCAAATGGTCACGAAATCTTGTACACTTTAAGTTGTTAGCTGAATTGTTTT
312 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATT-TTTT
** * * * * *
18993529 GCACAAGCCATA-AAAAATACAAGGATCATGCCTACCAAATTTGGAGCCAAAACTCCTTCCGAAA
376 GTGCATGCCA-ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* ** * * *
18993593 AAATTTTTAAAAAT-CCTGACTCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGT
440 AAATTTTAAAAAATCCCAAAC-CACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
** * *
18993657 CTTGCCATGAAACTTCACACGAAGGCTTAAGAGACCATTGTATGAATTTACAAGTCATAAAAATG
504 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
** * *
18993722 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCTATCGATCCATGGCTT
569 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * ** *
18993787 GCGCATCCCGTCTCTCCGACCGGCGTACTGCCTGCCTGCCCGCCCACTCGTTTCGTC-ATTGGCT
634 GCGCATCCCGTCTCTCTG-GCGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCT
** * ** *
18993851 TAGGCATACGGAGTTCATTCCCAGTCTATA-ATTGGATTAGACCGAGGGTTGCGGC-AGAAGGAT
698 TAGGCATACGGAGTTCATTCCCAGTCTA-AGATCAGACTAGATTGAGGGTTGCGGCTAGCAGGAT
* * ** * * **
18993914 CGGTAGCATGTAG-AGGGAGACCCAACCGATCCTCGACTTGTGCATCCTGCCCCTCTGGCCGGTT
762 CGGCAGCACGTAGAAGGG-GACCCGGCCGATCCCCGGCTTACGCATCC-GCCCCTCTGGCCGGTT
* * * *
18993978 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTTGGCATACGGAGTGCATTCCCAGTCTAA
825 GAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *
18994039 GCATACGGAGTTCATTCTCAGTCTAAGATCAGACCGGATAGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * *
18994104 CTCGAGCATGTGCTGGTGCTATATTTTTCTTCGACGGGGCACCATCGTCAGAGCATCATTGGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCG-C----CA-GA--G-C--ACCATC--CGGAGA
* * * * *
18994169 ACCTGATCGATGGCATTGGGGTTTCGGCGATCGGGGGGGCC-GGGGGGTGTGCACACATGATGTG
118 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* *
18994233 CGATGGATGCTGGTGCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
183 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
18994298 ACCCCCTTCAAGAGCATTTGAGATTTTACAGGTTTAC-GACCAGTAGCCTTTAAAGTGTCTGAAA
248 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG-CCAGTAGCCATTAAAGTGTCTGAAA
*
18994362 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTT
312 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAAT-TTTTT
* *
18994427 GTGCATGCCAACAAAAATACAAGGATCACGCCTACCAAGTTTGGGGCCAAAACTCCTTCCGACAA
376 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** ** * *
18994492 AATTTTGAAAAATCCCAAACCGTAAAAA-TTTTGAAGATCATGAAAAATAGAAAACGAGTCATCT
441 AATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
**
18994556 TGCCATGAAACTTCACACGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
506 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
18994621 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGT
571 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
18994686 GCATCTCGTTTCTCTGGCCGGCGTAGTGCCCGCCCGTCCG--T--TTGTTTCGTCAGTTGGGTTA
636 GCATCCCGTCTCTCTGG-CGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTA
* * * * *
18994747 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTCGC-GATAGCAGGATCGA
700 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTAGATTGAGGGTTGCGGCTAGCAGGATCGG
* * * * * * *
18994811 CAGCACGCAGAAAGGGACTCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGTCGG-CGAGC
765 CAGCACGTAGAAGGGGACCCGGCCGATCCCCGGCTTACGCAT-CCGCCCCTCTGGCCGGTTGAGC
* * *
18994875 GCCCGCACGCTCATTTTGTGGGTTGACTTAGGCATACGTAGTTCATTCCCAGTCCAA
829 GCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
18994932 GCATACGAAGTTCATTCCCAGTCTAAGATC-GAGCTGGACCGAGGGTTGCAGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGA-CCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * * *
18994996 GCTCGGGCATGTGCCGGTGCCGTATTTTTCTTCACCGGGGCACCATCGTCGGAGAACCTGACCGA
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCAGAGCACCATC--CGGAGAACCTGACCGA
** *
18995061 CGGCATTGGGGTTCCGGTGATCAGGGGGGCCGGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
128 CGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * * *
18995126 CTGGCTTCTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTTGAGAACTCACACCACCTT
192 CTGG-TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* * *
18995191 AAAGAGCATTTGGGATTTTATAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
256 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* * *
18995256 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGGTTTTAGCTGAATTATTCTGTGCTTGCC
321 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATT-TTTTGTGCATGCC
* * * *
18995321 AACAAAAATACAAGTATCCCGTCTACCGAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAA
385 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* *
18995386 AAATCCCAAACCACAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTCTTGACATGAA
450 AAATCCCAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
18995451 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
515 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
18995516 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
580 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * * *
18995581 CTCTTTGGTCGACGTAGTGCCCGCCCGCCCGCTTGCTCGTTTTGTCGGTTGGCTTAGGCATACGG
645 CTCTCTGG-CGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * * * *
18995646 AGTTCATTCCCAGTCTAAGATCAGACCAAATTGAGGTTTACGGCTA-CAGGATCGGCAACACGTA
709 AGTTCATTCCCAGTCTAAGATCAGACTAGATTGAGGGTTGCGGCTAGCAGGATCGGCAGCACGTA
* *
18995710 TAAGGGGACCCGGCCGATCCCGGGCTTACGCATCTCGCCCCTCTGGCCGGTTGAGCGCCCGCACG
774 GAAGGGGACCCGGCCGATCCCCGGCTTACGCATC-CGCCCCTCTGGCCGGTTGAGCGCCCGCACG
* * *
18995775 CTCGTTTTGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
838 CTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
18995823 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGGCCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
18995888 CTCGGGCATGTCCTTGTGCCGTATTTTTCTTCGCCAGAGCATCA-CCGGAGAACCTAACCGACGG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCAGAGCACCATCCGGAGAACCTGACCGACGG
** * * *
18995952 TTTTGGGGTTCCGACGATCGGGGGGGCCGGGCGGGTGTGTGCACATGATGTGCGATGGGCGCTGG
131 CATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGG
* *
18996017 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACTTCGAGAACTCACACCCCCTTGAAGA
196 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
*
18996082 GCATTTGAGATTTTACAGGTTTGCTGCCAGTACCCATTAAAGTGTCT-AGAATGGGGACACTTTT
261 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA-AATGGGGACACTTTT
18996146 TTCAAATGGTCACAAAATCTTGTACACTT-AGAGTTTTTAGCTGAATTTTTTTTGTGCATGCCAA
325 TTCAAATGGTCACAAAATCTTGTACACTTCA-AGTTTTTAGCTGAA--TTTTTTGTGCATGCCAA
*
18996210 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAACTCCTTCCGAAACAATTTTAAAA
387 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAAACTCCTTCCGAAAAAATTTTAAAA
*** * * * *
18996275 AATCCCAAACTGTAAAAAGTTTCAAAAATCGTTAAAAATAGAAAACGAGTCGTCTTGACTTGAAA
451 AATCCCAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * *
18996340 CTTCACGTGAAGGCTTAAGGGACCATTGTATGCATTTACAAGCCATAAAAATGGCATTGGCGTGT
516 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
*
18996405 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTT
581 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
18996458 TTGTTTGTCG
Statistics
Matches: 3695, Mismatches: 428, Indels: 160
0.86 0.10 0.04
Matches are distributed among these distances:
882 52 0.01
883 263 0.07
884 43 0.01
885 253 0.07
886 352 0.10
887 81 0.02
888 244 0.07
889 3 0.00
890 124 0.03
891 195 0.05
892 547 0.15
893 151 0.04
894 106 0.03
895 433 0.12
896 57 0.02
897 233 0.06
898 234 0.06
899 307 0.08
900 15 0.00
902 1 0.00
904 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (885 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCAGAGCACCATCCGGAGAACCTGACCGACGG
CATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGG
TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
TCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTGTGCATGCCAACAAA
AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
CAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
GGCGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
TCCCAGTCTAAGATCAGACTAGATTGAGGGTTGCGGCTAGCAGGATCGGCAGCACGTAGAAGGGG
ACCCGGCCGATCCCCGGCTTACGCATCCGCCCCTCTGGCCGGTTGAGCGCCCGCACGCTCATTTC
GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:18998893 original size:26 final size:26
Alignment explanation
Indices: 18998857--18998935 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
18998847 GTTGACTCAG
18998857 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18998883 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
18998909 GCATACGGAGTTCATTCTCAATCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
18998935 G
1 G
18998936 ATCGGACCGA
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19000729 original size:26 final size:26
Alignment explanation
Indices: 19000693--19000745 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19000683 GTTGACTTAG
*
19000693 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19000719 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19000745 G
1 G
19000746 ATCGGATTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19001595 original size:904 final size:904
Alignment explanation
Indices: 18997091--19006628 Score: 11807
Period size: 897 Copynumber: 10.6 Consensus size: 904
18997081 GTTGGCTTAG
* * * * **
18997091 GCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGGATCGAGGGTTACGATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
18997156 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC-ACGGAGCATC-ATCGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCT-AGAG
* * *
18997219 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCAGGGGGTGTGCACACATGATGTG
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTG
* * **
18997284 CAATGGGTGCTGGTATTTGG-CCTTATATTGGCCCCCTATCCCTCATTTAACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
18997348 ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
18997413 GGGGACATTTTTTTCAAATGGTCACAGAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * **
18997478 TGCATGCCAAAAAAAATACAAGGATAACGACTACCAAGATCAGGG-CAAAAACTCCTTCCGAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAA-TCCTTCCGAAAA
* *
18997542 AATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
453 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
18997607 TGCCATGAAACTTCACGTGAAGCCTTGAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
18997672 ATTGGCATGCAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATTGATCCATGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
18997737 GCATCCTGTC-CTTCTGGCCGGCGTAGTGCCCGCCTGCTCGCCT--GGCCACTTGTTTCGTC-GT
648 GCATCCCGTCTC-TCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTCCGCCCGCTCGTTTCGTCGGT
** * ** * *
18997798 TGGCTTAGGCATACGGAGTTCATTTACAGTCTAAGATCGAACTGGACTAAGGATTGCGGTAGCAG
712 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGGTAGCAG
* * * * * *
18997863 GATCGACAGCACGCAGAGGGGTACCCGACTGAT-CTCTGGCATACGCATCGCGCCCCACTGGCCG
777 GATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTC-GGCTTACGCATCCCGCCCCTCTGGCCG
* * *
18997927 GCTGAACGCCCGCACGCTCGTTTCGTGGGTTAACTTAGGCATACAGAGTTCATTCCCAGTCTAA
841 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
18997991 GCATATGGAGTTCATTCCCATTCTAAGATCGGACCGGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** *
18998056 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCACCAGGGCACCA---TC---G--TCG---GAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
* * * * *
18998110 ACCTGACAGGCGGCATTAGGGTTCTGATGATTGGTGGGGCCGGGGGGTGTGCGCACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGCCGGGGGGTGTGCGCACATGATGTGC
*
18998175 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
18998240 CCACCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
18998305 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAATTTTTAGCTGAATTTTTTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * **
18998370 GCATGCCAAAAAAAATACAAGGATCACGTCTACCAAATTTGGGG-AAAAAACCCCTTTTGAAAAA
390 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAA-TCCTTCCGAAAAA
* * * *
18998434 ATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCGTCTT
454 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
18998499 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * * * *
18998564 TTGGCA-GATAAAAATATGAAGAGGTGCCTAAAGCCACCTACCAACCTATCCATCTACGGCTTGC
584 TTGGCATG-CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
18998628 GCATCCCGTCTCTCTGGCCGACGTAGTGCCTGCCCGCCCGCCT--ACTCGCTCGTTTCATCGGTT
648 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTCCGCCCGCTCGTTTCGTCGGTT
* * **
18998691 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGAACTGGA-TCGAGGGTTGCGGTAGCAG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACT-GAGGGTTGCGGTAGCAG
* * * * * * * * * * *
18998755 GATCGGTAGCATGCAGAAGAGGACCCGACTGATCCCCGGCATACGCATCACACCCCACTGGTCGG
777 GATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGG
* * *
18998820 CTGAGCACCCGCACGCTCATTTCGTGGGTTGACTCAGGCATACGGAGTTCATTCCCAGTCTAA
842 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
18998883 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAATCTAAGATCGGACCGAAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G----------A-C------CGGACCG-A-
* * * *
18998948 CGAAGGTTACGGCAGCACATTCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGAG
43 -G--GGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
* * ** *
18999013 CACCATCATCGGAGCATCG-TCAGAGAACCTGACCGGCGGCAATGGGGTTCCGACGATCGAAGAG
105 CACCATCGTCGGAGCATCGCT-AGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG
* * *
18999077 CCGGGGGGTGTGCGCATATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTAT
169 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* * * *
18999142 CCCTTATCAAACCTCAAGAACTCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTAC
234 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
** *
18999207 CAGTAGCCATTAAAGTGTCTGAAATGAAGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGT
299 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
18999272 TCGAGTTTTTAG-TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGAATCACGTCTACCAAGTT
364 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
* * *
18999336 TGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA
429 TGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCG
* * *
18999401 TGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAAGCTTAAGGGACCACTGTAT
494 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* * ** * *
18999466 AAATTTACAAGCAATAAAAATGGCATTGGCACACAAAAATAAGAAGATGTGCCTAAACCCACCTA
559 GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTA
* * * * *
18999531 CCACCCTATCGATCCACGGCTTGCGTATCCCATCTCTCTAGCCGACGTAGTGCCCGCCCACCCG-
624 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGC
** * * * * * * *
18999595 C-CCATCCGCTCGTTTTGTCGATTAGCTTAGGAATACGAATTTCATTCCCAGTCTAAGATCAGAC
689 CTCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
* * * * * *
18999659 CACACCGAGGGTTGCGGTAGTAGGATCGACAGCACGTAGAGGGGGACCC-AGCCGATCCTCAGCT
754 CAGACTGAGGGTTGCGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCTCGGCT
* * *
18999723 TGCGCATCCCGCCCCTCTGGCCGGCTAAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCAT
818 TACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
* * *
18999788 ACGAAGTTCTTTCCTAGTCTAA
883 ACGGAGTTCATTCCCAGTCTAA
* * * * * **
18999810 GCATATGGAGTTCATTGCCAGTCTAAGATCGGACCAGACCGTGGGTTACAACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
18999875 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATC-TCCGGAGCATTG-TCGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGT-CGGAGCATCGCTAG-A
* *
18999938 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGTCGGGGGGTGTGCGCACATGATGT
129 GAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGT
* * *
19000003 GCGATGGCTGCTGGTACTTGGTCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19000068 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTAAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT----
* * * * *
19000133 AAAATGGAGACA-TTTTTTCAAAATGGT--CAAAATCTTGTACCCTATGGAGTTTATAGC-GAAT
319 GAAATGGGGACACTTTTTTC-AAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAAT
* * ** ** *
19000194 TTTTTTGTGCATG-CAACAAAAAATACAAGGATCATGTCAACCAAGTTTGGCACTGAAACTCCTT
382 TTTTTTGTGCATGCCAAC-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTT
* * *
19000258 CCAAAAAAATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
446 CCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGA
19000323 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
511 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * * *
19000388 AAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTCAACCCACCTACCACGCTATTGATCCAC
576 AAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * * *
19000453 GGCATGCGCATCCCGTCTCTCTCGCCGACGTAGTGCCCACCCGCCCGTCCGCCCGCCCGCTTGTT
641 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CC-TCCGCCCGCTCGTT
* * * * *
19000518 TCTTCGGTTGGCTTAGGCATACGGAATTCATTCCCAGTCTAAGATCAGACCACACCGAGGGTTGC
704 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGC
* * * * * *
19000583 GGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCTATCGATCCCCAGCTTGCACATCCCGCCCCT
769 GGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCT
* * * * *
19000648 CTGGCCGACTAAGGGCCTGAACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
834 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
19000713 GTCTAA
899 GTCTAA
* ** *
19000719 GCATACGGAGTTCATTCCCAATCTAAGATCGGATTGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * *
19000784 CTCGGTCATGTGCTGGTGCCACATTTTTTTTCATCGGGGCACCATCGCCAGAGCATCGCTTGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
* *
19000849 TCATGACCGGCGGCATTGGGGTTCCGACGATCGGGGGCGCCGGGGGGTGTGCGCACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGG-GCCGGGGGGTGTGCGCACATGATGTGC
* *
19000914 GATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19000979 CCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGTAGCCATTAAAGTGTCTCAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
19001044 GGGACAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-ATTTTTTTAT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
19001107 GCATGCCAACAAACATACAAGGATCACGTCTACCAAGTATGGGGCCAAAAATACTTCCGAAAAAA
390 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAA
* *
19001172 TTTT-AAAAATCCCGAACCACAAAAAGTTTCAAAAATAGTGAAAAATAGAAAACGAGTCGTCTTG
455 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
19001236 CCATGAAACTTCACGTGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
19001301 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGTGC
585 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * *
19001366 ATCCCGTCTCTTTGGCCGGCGTAGTGACCGCCCGCCCGCCTACCCGCCCGCTCGTTTCCTCTGTT
650 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCT--CCGCCCGCTCGTTTCGTCGGTT
* * * * *
19001431 GGCTTAGGCATACGGAGTTAATTCCTAGTCTAAGATCGGACCGGACTGAGGGTTGTGGCAGCAGG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGGTAGCAGG
* ** * ** * * *
19001496 ATCGGTAGCACTTAGAGGTGGACCCGACCGATCCTCACCTTACGCATCTCGCTCCTCTGGCCGGT
778 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGC
* * * * * *
19001561 TGAGAGCCCGCACACTCGTTTTGTGTGTTGACTTAGGCGTACGAAGTTCATTCCCAGTCTAA
843 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
19001623 GCATATGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-CG--G---A---C----C---G----G-----AC
* * **
19001688 CGAGGGTTACGGCAGCACATACTGGGCTCGGGCATGT-CTTGGTGCATCATTTTTCTTCGTCGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGC-TGGTGCCGCATTTTTCTTCGTCGGG
* * ** * **
19001752 GCACCATCGTCGGAGCACCACCGGAGAACCTGACCGGCGGCATTGGGGTTCTGGTGATCGAGGGG
104 GCACCATCGTCGGAGCATCGCTAGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCG-GGGG
* * *
19001817 GCGGGGGGGGGGTGAGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
168 GC---CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
19001882 CTATCCCTCATCAAACCTCGAGAACTCACA--CCC--------C----------TTA-A------
230 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
*
19001920 -----AG-AGCC-------T-T-TGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTA
295 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * *
19001970 CACTTCGTGTTTTTAGCT-ATATTTTTTTGTGCACGCCATCAAAAATACAAGGATCACGTCTACC
360 CACTTCGAGTTTTTAGCTGA-ATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* * * *
19002034 AAGTTTCGGGCCAAAACA-CCTTTCGAAAAAATTTTAAAAAATCTCGAACCTCAAAAAGTTTCAA
424 AAGTTTGGGGCCAAAA-ATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAA
19002098 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
488 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
*
19002163 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGTATGCAGAAATATGAAGATGTGCCTAAACC
553 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACC
* * * **
19002228 CACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGGCGACGTAGTGCCCGCTT
618 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC
* * * * * * * *
19002293 GCTCG--ACCGCTCGCTCATTTCATCGATTGGCTTACGCATATGGAGTTCATTCCCAGTCTAAGA
683 GCCCGCCTCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
** * * * * * * *
19002356 TTAGACCAGA-TCGAGGGTTGAGGTAGGAGGATCGACAGCACGTACAGTGGGACCCGGCCGATCC
748 TCGGACCAGACT-GAGGGTTGCGGTAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCC
* * ** **
19002420 CCGGCTTGCGCATCCTACCCCTCTGGCCAACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
812 TCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
*
19002485 AGGCATA-GGAAGTTGATTCCCAGTCTAA
877 AGGCATACGG-AGTTCATTCCCAGTCTAA
* * *
19002513 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGATCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * *
19002578 CTCGGGCATGCACTGGTACCGCATTTTTCTTCGCCTGGGCACCATCGTCGGAGCATCACTAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
* * *
19002643 ACCTGACAGGCGGCATTGGGGTT-CGGCGATTGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGA-TCGGGGGGCC-GGGGGGTGTGCGCACATGATGTG
*
19002707 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAGACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
19002772 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCGATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19002837 GGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTCCGTGTTTTTAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * *
19002902 TGAATGCCAACAAGAATACAAGGATCACATCTACCAAGTTTCGGGCCAAAACTCCTTTCGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAA
* ** *
19002967 ATTTTAAAAATTCTTGAACCTCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
19003032 GCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * *
19003097 TTGGTAGGCAGAAATATGAAGATGTGCCTAAACACACCTACCACCCTATCGATCCACGGCTTGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
*
19003162 CATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCCG--T----TCGCTCGTTTCGTCGGTTG
649 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTCCGCCCGCTCGTTTCGTCGGTTG
** * * * * ** *
19003217 GCTTACACATATGGAGTTCATTCCCAGTCTAAGATTGGACCAGATTGAGGGTTGTGCCAGGAGGA
714 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGGTAGCAGGA
* * ** * * * * *
19003282 TCGGCAGCATGTAGAGGGGGACTAGGCCGATTCTCGACTTACGCATCCCGCCCCTCTGGTCGACT
779 TCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCT
** *
19003347 GAGCGCCCGTGCGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTACCAGTCTAA
844 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
19003408 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTGGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19003473 CTCGGGTATGTGCTGGTGCCGCATTTTTCTTCGTTGGGGCACCATCGTCGGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
* *
19003538 ACCTGACAGGCCGCATTGGGGTTCCGACGATCGGAGGGGCCGGGGGCGGTGTGCGCACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGCC-GGGG-GGTGTGCGCACATGATGT
* * *
19003603 GCGATGGGTGCTGGTACTTGGCCCTTGTATTGGTCCCCTATCCCTCGTCAAACCTCGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
19003668 CACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAATTGTCTGAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19003733 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19003798 GTGCATGCCAAAAAAAATACGAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
* * * *
19003863 AATTTTAAAACATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAGTAGAAAATGAGTCGTCT
453 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* **
19003928 TGCCATGAAACTTCTCGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGATATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
19003993 ATTGGCACGTAGAAATATGAAGATGTGCCTAAACTCACCTACCACCCTATCGATCCACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
19004058 GCATCCCGTCTCTCGGGCTGGCGTAGTGCCCGCCCGCCTG-C-CCTCCTGCTCATTTCGTCGGTT
648 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTCCGCCCGCTCGTTTCGTCGGTT
* * ** *
19004121 GGTTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCTGTAGCAGG
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGGTAGCAGG
* **
19004186 ATCGGCAGCACGCAGAGGGGGA----TCCGA---T---C--A---ATCCC-CAGCT-T-G-C-GC
778 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGC
* * *
19004231 --A--TCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCATTCTAA
843 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * * * *
19004289 CCGTACGGAGTTCATTCCCAGTCTAAAATTAGACCAGACCGAGGGTTGTGACAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * ** * *
19004354 CTCGGGCATGTGCTGGTGTCACATTTTTTTTCGTCGGGGCACCATCGTCAAAGCATCGC-CGGGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
* * * ** *
19004418 ACCTGACTGACAGCATTGGGGTTCCGGTGATCGGGGGGGCCGGGGGAGTGTGCGTACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGG-GTGTGCGCACATGATGTG
*
19004483 CGATGGGTGCTGGTACTTGGCCCTTATATTAGG-CCCCTATCCCTCATCAAACCTCAAGAACTCA
194 CGATGGGTGCTGGTACTTGGCCCTTATATT-GGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
19004547 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19004612 TGGGGACACTTTTTTCAAATGGTCACAAAATCGTGTACACTTTGAGTTTTTAGCTG-ACTTTTTT
323 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19004676 GTGTATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATTGCTTCCGAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
* ** ** *
19004741 AATTTTAAAAAATCTCGAACTACAAAAAGTTTTGAAAATCGTGAAAAACAGAAAACGAGTCGTCT
453 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19004806 TGCCATGAAACTTCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
19004871 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTGC
583 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
19004936 GCATCCCGTCTCTCTAGCCAGCGTAGT----GCCCGCCCGCCT--GCCCGCTCATTTCGTCGATT
648 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTCCGCCCGCTCGTTTCGTCGGTT
* * * * * * * *
19004995 GGCTTAGGCATACGGAATACATTCCTAGTCTAAGATCAGACCA-AATCGAGGGTTACAGTAGCAA
713 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACT-GAGGGTTGCGGTAGCAG
* * * * ** * **
19005059 AATCGGTAGCACGCAGAGGGAGACCCGACCGAGCCTCGGCTTGTGCATCCCACCCCTCTGGCCAA
777 GATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGG
*
19005124 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
842 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19005187 GAATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCACATGCAGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * *
19005252 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCAACATCACCGGAGCATCGTTGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
* * * * * *
19005317 ACCTAATCGACGGCACTAGGGTTCCGACGATCGGGAGGGCCGGGGGGTGTGCACACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGG-GGGCCGGGGGGTGTGCGCACATGATGTGC
*
19005382 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
19005447 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19005512 GGGACACTTTTTTCAAATGGTCAC-AAATCTTGTACACTTCGAGTTTGTAGCTGAATTCTTTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *** * *
19005576 GCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGCTACAAAACTCCTT-CTAAAAAA
390 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAA
* *
19005640 TTTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
455 -TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
19005705 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * *
19005770 TTGGGATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACAGCTTGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
** * * * * *
19005835 CATCTTGTCTCTCTGGTCGGCGTAGTGCCCGTCTGCCCGCCCACCCACCCGCTCGTTTCGTCGGT
649 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CC-TCCGCCCGCTCGTTTCGTCGGT
* * * * * * * * * *
19005900 TGGATTAGGCATACAGAGTTCATTCCTAATCTAAGATTGAATCGGACTGAGGGTT-CTTGCAGCA
712 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGC-GGTAGCA
* * * *
19005964 GGATCGGCAGCACGCAAAGGGGGACCCGACTGATCC-CTGGGTTACGCATCCTGCCCCTCTGGCC
776 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCTC-GGCTTACGCATCCCGCCCCTCTGGCC
* * *
19006028 GGCTGAGCGCCCGCACCCTCGTTTCGTGGGTTAACTTAGGCATACAGAGTTCATTCCCAGTCTAA
840 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19006093 GCATACGGAGTTCATCCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** ** *
19006158 CTTGGGCATGTGCTGGTGCTGCACGTTTCTTCG-CTGGGGCACCATCACCGGAGCATCGCTGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGCTAGAG
* * * * * *
19006222 AACCTTACCGGCGGCATTAGGGTTCCGACAAT--------CGGGGGGTGTGCTCACATGGTGTAC
130 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
** * *
19006279 GATGGGCACTGGTACTTGGCCCTAATATTGGCCCGCTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19006344 CCCCCTTAAAGAGCACTCGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19006409 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTGTTTTGT
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * * * *
19006474 GCATG-CAACAAAAATACAAGGATCACGTCTTCCAAGTTCGGGACTAAAACTCCTTTCAAAAAAA
390 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAA
* * * * *
19006538 TTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAATGAGTTGTCTTG
455 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
19006603 CCATGAAACTTCACGTGAAGGCTTAA
520 CCATGAAACTTCACGTGAAGGCTTAA
19006629 TATGAAGATG
Statistics
Matches: 7537, Mismatches: 876, Indels: 453
0.85 0.10 0.05
Matches are distributed among these distances:
861 86 0.01
863 13 0.00
864 102 0.01
865 1 0.00
869 1 0.00
871 1 0.00
873 2 0.00
874 95 0.01
875 1 0.00
876 1 0.00
878 272 0.04
879 195 0.03
880 38 0.01
881 164 0.02
882 1 0.00
883 2 0.00
884 1 0.00
885 1 0.00
886 2 0.00
887 1 0.00
888 3 0.00
889 14 0.00
890 280 0.04
891 456 0.06
892 240 0.03
893 80 0.01
894 217 0.03
895 322 0.04
896 21 0.00
897 797 0.11
898 633 0.08
899 43 0.01
900 101 0.01
901 119 0.02
902 149 0.02
903 342 0.05
904 442 0.06
905 469 0.06
906 356 0.05
907 4 0.00
908 6 0.00
909 466 0.06
910 3 0.00
911 1 0.00
912 2 0.00
913 11 0.00
914 1 0.00
916 1 0.00
918 59 0.01
921 3 0.00
923 2 0.00
924 2 0.00
925 2 0.00
926 7 0.00
927 471 0.06
928 200 0.03
929 32 0.00
930 109 0.01
931 6 0.00
933 85 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (904 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTAGAGA
ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAAT
TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTCCGCCCGCTCGTTTCGTCGGTTGGC
TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGGTAGCAGGATC
GGCAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGA
GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:19001641 original size:26 final size:26
Alignment explanation
Indices: 19001600--19001675 Score: 125
Period size: 26 Copynumber: 2.9 Consensus size: 26
19001590 GACTTAGGCG
19001600 TACGAAGTTCATTCCCAGTCTAAGCA
1 TACGAAGTTCATTCCCAGTCTAAGCA
* *
19001626 TATGGAGTTCATTCCCAGTCTAAGCA
1 TACGAAGTTCATTCCCAGTCTAAGCA
*
19001652 TACGAAGTTCATTCCTAGTCTAAG
1 TACGAAGTTCATTCCCAGTCTAAG
19001676 ATCAGACCAA
Statistics
Matches: 45, Mismatches: 5, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.29, C:0.24, G:0.17, T:0.30
Consensus pattern (26 bp):
TACGAAGTTCATTCCCAGTCTAAGCA
Found at i:19002524 original size:26 final size:26
Alignment explanation
Indices: 19002487--19002539 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
19002477 GTTGACTTAG
*
19002487 GCATAGGAAGTTGATTCCCAGTCTAA
1 GCATAGGAAGTTCATTCCCAGTCTAA
19002513 GCATACGG-AGTTCATTCCCAGTCTAA
1 GCATA-GGAAGTTCATTCCCAGTCTAA
19002539 G
1 G
19002540 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATAGGAAGTTCATTCCCAGTCTAA
Found at i:19003418 original size:26 final size:26
Alignment explanation
Indices: 19003382--19003434 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19003372 GTTGACTTAG
19003382 GCATACGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
*
19003408 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
19003434 G
1 G
19003435 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:19006103 original size:26 final size:26
Alignment explanation
Indices: 19006067--19006119 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19006057 GTTAACTTAG
*
19006067 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATCCCCAGTCTAA
*
19006093 GCATACGGAGTTCATCCCCAGTCTAA
1 GCATACAGAGTTCATCCCCAGTCTAA
19006119 G
1 G
19006120 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.28, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTTCATCCCCAGTCTAA
Found at i:19006933 original size:26 final size:26
Alignment explanation
Indices: 19006904--19006956 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19006894 GTTGACTTAG
19006904 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
19006930 GCATACGGAGTTCTTTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19006956 G
1 G
19006957 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19008694 original size:26 final size:26
Alignment explanation
Indices: 19008664--19008716 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19008654 GTTGACTTAG
**
19008664 GCATACGTTGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19008690 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19008716 G
1 G
19008717 ATCGAATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.26, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19009582 original size:26 final size:26
Alignment explanation
Indices: 19009546--19009598 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19009536 GTCGACTTAG
*
19009546 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19009572 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19009598 G
1 G
19009599 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19010482 original size:26 final size:26
Alignment explanation
Indices: 19010446--19010498 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19010436 GTTGACTTAG
19010446 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19010472 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19010498 G
1 G
19010499 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19011749 original size:889 final size:888
Alignment explanation
Indices: 18997091--19022607 Score: 25348
Period size: 898 Copynumber: 28.6 Consensus size: 888
18997081 GTTGGCTTAG
* * * * * **
18997091 GCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGGATCGAGGGTTACGATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
18997156 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC-ACGGAGCATCATCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * *
18997220 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCAGGGGGTGTGCACACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * **
18997285 AATGGGTGCTGGTATTTGG-CCTTATATTGGCCCCCTATCCCTCATTTAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
18997349 CCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
18997414 GGGACATTTTTTTCAAATGGTCACAGAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * ** *
18997479 GCATGCCAAAAAAAATACAAGGATAACGACTACCAAGATCAGGGCAAAAACTCCTTCCGAAAAAA
391 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* ** *
18997544 TTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
456 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
18997609 CCATGAAACTTCACGTGAAGCCTTGAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
521 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGCAT
** * * *
18997674 TGGCATGCAGAAATATGAAGATGTGCCAAAACCCACCTACCACCCTATTGATCCATGGCTTGCGC
574 TGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * ** * *
18997739 ATCCTGTC-CTTCTGGCCGGCGTAGTGCCCGCCTGCTCGCCTGGCCACTTGTTTCGTC-GTTGGC
639 ATCCCGTCTC-TCTGGCCGACGTAGTGCCCGCCCGCCCGCC-CCCCGCTCGTTTCGTCGGTTGGC
** * * *
18997802 TTAGGCATACGGAGTTCATTTACAGTCTAAGATC-GAACTG-GACTAAGGATTGCGGTAGCAGGA
702 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATC-GAG-CTGAGGGTTGCGGTAGCAGGA
* * * * * *
18997865 TCGACAGCACGCAG-AGGGGTACCCGA-CTGATCTCTGGCATACGCATCGCGCCCCACTGGCCGG
765 TCGACAG-ACACAGAAGGGG-ACCCGATC-GATC-CCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * *
18997928 CTGAACGCCCGCACGCTCGTTTCGTGGGTTAACTTAGGCATACAGAGTTCATTCCCAGTCTAA
826 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
18997991 GCATATGGAGTTCATTCCCATTCTAAGATCGGACCGGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
18998056 CTCGGGCATGTGCTGGTGCCGTATTTTTC-T--T-----CACCA--G--GGCACCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG-AGCATCGTCGGAG
* * * * *
18998109 AACCTGACAGGCGGCATTAGGG-TTCTGATGATTGGTGGGGCCGGGGGGTGTGCGCACATGATGT
130 AACCTGACCGGCGGCATTGGGGTTTC-GACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGT
*
18998173 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCACTCATCAAACCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
18998238 CACCACCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
18998303 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAATTTTTAGCTGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * ** * **
18998368 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAATTTGGGGAAAAAACCCCTTTTGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
18998433 AATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
18998498 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
* * * * * * * *
18998563 ATTGGCAGATAAAAATATGAAGAGGTGCCTAAAGCCACCTACCAACCTATCCATCTACGGCTTGC
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
18998628 GCATCCCGTCTCTCTGGCCGACGTAGTGCCTGCCCGCCCGCCTACTCGCTCGTTTCATCGGTTGG
637 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCC-CCCCGCTCGTTTCGTCGGTTGG
* * *
18998693 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-TGAACTG-GATCGAGGGTTGCGGTAGCAGG
701 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATC-GAGCT-GAGGGTTGCGGTAGCAGG
** * * * * * * *
18998756 ATCGGTAG-CATGCAGAAGAGGACCCGA-CTGATCCCCGGCATACGCATCACACCCCACTGGTCG
764 ATCGACAGACA--CAGAAGGGGACCCGATC-GAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * *
18998819 GCTGAGCACCCGCACGCTCATTTCGTGGGTTGACTCAGGCATACGGAGTTCATTCCCAGTCTAA
825 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
18998883 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAATCTAAGATCGGACCGAAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C----A---GACCG-A-
* * * *
18998948 CGAAGGTTACGGCAGCACATTCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGAG
43 -G--GGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
** * * * * *
18999013 CACCATCATCGGAGCATCGTCAGAGAACCTGACCGGCGGCAATGGGGTTCCGACGATC-GAAGAG
105 CACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGG
* * *
18999077 CCGGGGGGTGTGCGCATATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTAT
170 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* * * *
18999142 CCCTTATCAAACCTCAAGAACTCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTAC
235 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
** *
18999207 CAGTAGCCATTAAAGTGTCTGAAATGAAGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGT
300 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
18999272 TCGAGTTTTTAG-TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGAATCACGTCTACCAAGTT
365 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
* * * *
18999336 TGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA
430 TGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCG
* * *
18999401 TGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAAGCTTAAGGGACCACTGTAT
495 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* * *
18999466 AAATTTACAAGCAATAAAAATGGCATTGGCACACAAAAATAAGAAGATGTGCCTAAACCCACCTA
560 GAA-TT-------AT----ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTA
* * * *
18999531 CCACCCTATCGATCCACGGCTTGCGTATCCCATCTCTCTAGCCGACGTAGTGCCCGCCCACCCGC
613 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGC
* * * * * * * *
18999596 CCATCCGCTCGTTTTGTCGATTAGCTTAGGAATACGAATTTCATTCCCAGTCTAAGATCAGA-CC
678 CC-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCG
* * * * * *
18999660 ACACCGAGGGTTGCGGTAGTAGGATCGACAG-CACGTAGAGGGGGACCC-AGCCGATCCTCAGCT
742 A-GCTGAGGGTTGCGGTAGCAGGATCGACAGACAC--AGAAGGGGACCCGA-TCGATCC-CGGCT
* *
18999723 TGCGCATCCCGCCCCTCTGGCCGGCTAAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCAT
802 TGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
* * *
18999788 ACGAAGTTCTTTCCTAGTCTAA
867 ACGGAGTTCATTCCCAGTCTAA
* * * * **
18999810 GCATATGGAGTTCATTGCCAGTCTAAGATCGGACCAGACCGTGGGTTACAACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
18999875 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCTCCGGAGCATTGTCGAAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * *
18999940 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGGTCGGGGGGTGTGCGCACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
19000005 GATGGCTGCTGGTACTTGGTCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
19000070 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTAAAAAA
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT----GA
* * * *
19000135 AATGGAGACA-TTTTTTCAAAATGGT--CAAAATCTTGTACCCTATGGAGTTTATAGC-GAATTT
322 AATGGGGACACTTTTTTC-AAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTT
* * ** **
19000196 TTTTGTGCATG-CAACAAAAAATACAAGGATCATGTCAACCAAGTTTGGCACTGAAACTCCTTCC
385 TTTTGTGCATGCCAAC-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* **
19000260 AAAAAAATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
449 GAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
19000325 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
514 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----
*** * * *
19000390 ATGGCATTGGCATGTAGAAATATGAAGATGTGCCTCAACCCACCTACCACGCTATTGATCCACGG
567 ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * *
19000455 CATGCGCATCCCGTCTCTCTCGCCGACGTAGTGCCCACCCGCCCGTCCGCCCGCCCGCTTGTTTC
632 CTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG----CCCGCCCGCCCGCCC-CCCGCTCGTTTC
* * * * *
19000520 TTCGGTTGGCTTAGGCATACGGAATTCATTCCCAGTCTAAGATCAGA-CCACACCGAGGGTTGCG
692 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGA-GCTGAGGGTTGCG
* * * * * *
19000584 GTAGCAGGATCGGCAGCACGCAGAGGGGGACCCTATCGATCCCCAGCTTGCACATCCCGCCCCTC
756 GTAGCAGGATCGACAG-ACACAGAAGGGGACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTC
* * * * *
19000649 TGGCCGACTAAGGGCCTGAACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
819 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
19000714 TCTAA
884 TCTAA
* *** *
19000719 GCATACGGAGTTCATTCCCAATCTAAGATCGGATTGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
19000784 CTCGGTCATGTGCTGGTGCCACATTTTTTTTCATCGGGGCACCATCGCCAGAGCATCG-CTTGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTC-GGAG
* * *
19000848 ATCATGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGCGCCGGGGGGTGTGCGCACATGATGT
130 AACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGG-GCCGGGGGGTGTGCGCACATGATGT
* *
19000912 GCGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
19000977 CACCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGTAGCCATTAAAGTGTCTCAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
19001042 TGGGGACAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-ATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
19001105 ATGCATGCCAACAAACATACAAGGATCACGTCTACCAAGTATGGGGCCAAAAATACTTCCGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** *
19001170 AATTTT-AAAAATCCCGAACCACAAAAAGTTTCAAAAATAGTGAAAAATAGAAAACGAGTCGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
19001234 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
** * *
19001299 ATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGT
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
19001364 GCATCCCGTCTCTTTGGCCGGCGTAGTGACCGCCCGCCCGCCTACCCGCCCGCTCGTTTCCTCTG
637 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG----CCC-CCCGCTCGTTTCGTCGG
* * * * * *
19001429 TTGGCTTAGGCATACGGAGTTAATTCCTAGTCTAAGATCGGACCG-GACTGAGGGTTGTGGCAGC
697 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGTAGC
** * ** * * *
19001493 AGGATCGGTAG-CACTTAG-AGGTGGACCCGACCGATCCTCACCTTACGCATCTCGCTCCTCTGG
761 AGGATCGACAGACAC--AGAAGG-GGACCCGATCGATCC-CGGCTTGCGCATCCCGCCCCTCTGG
* * * * * * *
19001556 CCGGTTGAGAGCCCGCACACTCGTTTTGTGTGTTGACTTAGGCGTACGAAGTTCATTCCCAGTCT
822 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
19001621 AA
887 AA
*
19001623 GCATATGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-CG--G---------A--C------CAG-----AC
* * **
19001688 CGAGGGTTACGGCAGCACATACTGGGCTCGGGCATGT-CTTGGTGCATCATTTTTCTTCGTCGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGC-TGGTGCCGCATTTTTCTTCGTCGGG
* * ** **
19001752 GCACCATCGTCGGAGCACCACCGGAGAACCTGACCGGCGGCATTGGGG-TTCTGGTGATC-GAGG
104 GCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTTC-GACGATCGGA-G
* * *
19001815 GGGCGGGGGGGGGGTGAGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
167 GGGC---CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
19001880 CCCTATCCCTCATCAAACCTCGAGAACTCACA--CCC--------C----------TTA-A----
229 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
19001920 -------AG-AGCC-------T-T-TGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTG
294 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * *
19001968 TACACTTCGTGTTTTTAGCT-ATATTTTTTTGTGCACGCCATCAAAAATACAAGGATCACGTCTA
359 TACACTTCGAGTTTTTAGCTGA-ATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
* * *
19002032 CCAAGTTTCGGGCCAAAACACCTTTCGAAAAAATTTTAAAAAATCTCGAACC-TCAAAAAGTTTC
423 CCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGT-AAAAAGTTTC
19002096 AAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
487 AAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
* **
19002161 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGTATGCAGAAATATGAAGATGTGCCTAAA
552 CATTGTATGAA-TT-------AT----ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAA
* *
19002226 CCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGGCGACGTAGTGCCCGC
605 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGC
** * * * * * * * *
19002291 TTGCTCGACCGCTCGCTCATTTCATCGATTGGCTTACGCATATGGAGTTCATTCCCAGTCTAAGA
670 CCGCCCG-CCCCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * * * * **
19002356 TTAGA-CCAGATCGAGGGTTGAGGTAGGAGGATCGACAG-CAC-GTACAGTGGGACCCGGCCGAT
734 TCAGATCGAGCT-GAGGGTTGCGGTAGCAGGATCGACAGACACAG-A-AG-GGGACCCGATCGAT
** **
19002418 CCCCGGCTTGCGCATCCTACCCCTCTGGCCAACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
795 -CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
*
19002483 TTAGGCATA-GGAAGTTGATTCCCAGTCTAA
859 TTAGGCATACGG-AGTTCATTCCCAGTCTAA
* * * *
19002513 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGATCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * * * *
19002578 CTCGGGCATGCACTGGTACCGCATTTTTCTTCGCCTGGGCACCATCGTCGGAGCATC-ACTAGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTC-GGAG
* * * *
19002642 AACCTGACAGGCGGCATTGGGG-TTCGGCGATTGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
130 AACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCC-GGGGGGTGTGCGCACATGATGT
*
19002706 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAGACCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19002771 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCGATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19002836 TGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTCCGTGTTTTTAGCTGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * *
19002901 GTGAATGCCAACAAGAATACAAGGATCACATCTACCAAGTTTCGGGCCAAAACTCCTTTCGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
19002966 AATTTTAAAAATTCTTGAACC-TCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
454 AATTTTAAAAAATCTCGAACCGT-AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
19003030 TTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGG
* ** *
19003095 CATTGGTAGGCAGAAATATGAAGATGTGCCTAAACACACCTACCACCCTATCGATCCACGGCTTG
571 CATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* **
19003160 CGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCCG---TTCGCTCGTTTCGTCGGTTGG
636 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGG
** * ** * * * ** *
19003218 CTTACACATATGGAGTTCATTCCCAGTCTAAGATTGGA-CCAGATTGAGGGTTGTGCCAGGAGGA
701 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGTAGCAGGA
* * * ** ** * * * * *
19003282 TCGGCAG-CATGTAGAGGGGGACTAGGCCGATTCTCGACTTACGCATCCCGCCCCTCTGGTCGAC
765 TCGACAGACA--CAGAAGGGGACCCGATCGA-TCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGC
** *
19003346 TGAGCGCCCGTGCGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTACCAGTCTAA
827 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19003408 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTGGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19003473 CTCGGGTATGTGCTGGTGCCGCATTTTTCTTCGTTGGGGCACCATCGTCGGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * *
19003538 ACCTGACAGGCCGCATTGGGGTTCCGACGATCGGAGGGGCCGGGGGCGGTGTGCGCACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCC-GGGG-GGTGTGCGCACATGATGT
* * *
19003603 GCGATGGGTGCTGGTACTTGGCCCTTGTATTGGTCCCCTATCCCTCGTCAAACCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
19003668 CACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAATTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19003733 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
19003798 GTGCATGCCAAAAAAAATACGAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * * *
19003863 AATTTTAAAACATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAGTAGAAAATGAGTCGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
19003928 TGCCATGAAACTTCTCGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGATATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA--T------TAT----ATGGC
** *
19003993 ATTGGCACGTAGAAATATGAAGATGTGCCTAAACTCACCTACCACCCTATCGATCCACGGCTTGC
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
19004058 GCATCCCGTCTCTCGGGCTGGCGTAGTGCCCGCCCGCCTGCCCTCCTGCTCATTTCGTCGGTTGG
637 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCC-CCCGCTCGTTTCGTCGGTTGG
* * * * ** *
19004123 TTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGA-CCAGACCAAGGGTTGCTGTAGCAGGA
701 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGTAGCAGGA
* * * * *
19004187 TCGGCAGCACGCAGAGGGGGATCCGATCAAT--C--C---C-CA----G---CT-T-G-C-GC--
765 TCGACAG-ACACAGAAGGGGACCCGATCGATCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * *
19004231 A--TCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCATTCTAA
829 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * * *
19004289 CCGTACGGAGTTCATTCCCAGTCTAAAATTAGACCAGACCGAGGGTTGTGACAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * ** *
19004354 CTCGGGCATGTGCTGGTGTCACATTTTTTTTCGTCGGGGCACCATCGTCAAAGCATCGCCGG-GA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * ** * *
19004418 ACCTGACTGACAGCATTGGGGTTCCGGTGATCGGGGGGGCCGGGGGAGTGTGCGTACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGG-GTGTGCGCACATGATGTG
*
19004483 CGATGGGTGCTGGTACTTGGCCCTTATATTAGG-CCCCTATCCCTCATCAAACCTCAAGAACTCA
195 CGATGGGTGCTGGTACTTGGCCCTTATATT-GGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
19004547 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
19004612 TGGGGACACTTTTTTCAAATGGTCACAAAATCGTGTACACTTTGAGTTTTTAGCTG-ACTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19004676 GTGTATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATTGCTTCCGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
*** ** *
19004741 AATTTTAAAAAATCTCGAACTACAAAAAGTTTTGAAAATCGTGAAAAACAGAAAACGAGTCGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
19004806 TGCCATGAAACTTCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
*** *
19004871 ATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTGC
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
19004936 GCATCCCGTCTCTCTAGCC-AGCGTAGTGCCCGCCCGCCTG---CCCGCTCATTTCGTCGATTGG
637 GCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGG
* * * * ** * * **
19004997 CTTAGGCATACGGAATACATTCCTAGTCTAAGATCAGA-CCAAATCGAGGGTTACAGTAGCAAAA
701 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAGCT-GAGGGTTGCGGTAGCAGGA
** * * * * * **
19005061 TCGGTAGCACGCAG-AGGGAGACCCGACCGAGCCTCGGCTTGTGCATCCCACCCCTCTGGCCAAC
765 TCGACAG-ACACAGAAGGG-GACCCGATCGATCC-CGGCTTGCGCATCCCGCCCCTCTGGCCGGC
*
19005125 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
827 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
19005187 GAATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCACATGCAGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19005252 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCAACATCACCGGAGCATCGTTGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * * *
19005317 ACCTAATCGACGGCACTAGGGTTCCGACGATCGG-GAGGGCCGGGGGGTGTGCACACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAG-GGGCCGGGGGGTGTGCGCACATGATGTG
*
19005381 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
19005446 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
19005511 GGGGACACTTTTTTCAAATGGTCAC-AAATCTTGTACACTTCGAGTTTGTAGCTGAATTCTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *** *
19005575 TGCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGCTACAAAACTCCTT-CTAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* *
19005639 ATTTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
455 A-TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
19005704 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
* ** * * *
19005769 ATTGGGATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACAGCTTGC
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
** * * *
19005834 GCATCTTGTCTCTCTGGTCGGCGTAGTGCCCGTCTGCCCGCCCACCCACCCGCTCGTTTCGTCGG
637 GCATCCCGTCTCTCTGGCCGACGTAGTG-CC--C-GCCCGCCCGCCC-CCCGCTCGTTTCGTCGG
* * * * * * *
19005899 TTGGATTAGGCATACAGAGTTCATTCCTAATCTAAGAT-TGAATCG-GACTGAGGGTT-CTTGCA
697 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ATCGAG-CTGAGGGTTGC-GGTA
* * * * *
19005961 GCAGGATCGGCAGCACGCA-AAGGGGGACCCGA-CTGATCCCTGGGTTACGCATCCTGCCCCTCT
759 GCAGGATCGACAG-ACACAGAA-GGGGACCCGATC-GATCCC-GGCTTGCGCATCCCGCCCCTCT
* * *
19006024 GGCCGGCTGAGCGCCCGCACCCTCGTTTCGTGGGTTAACTTAGGCATACAGAGTTCATTCCCAGT
820 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
19006089 CTAA
885 CTAA
* * *
19006093 GCATACGGAGTTCATCCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** *
19006158 CTTGGGCATGTGCTGGTGCTGCACGTTTCTTCG-CTGGGGCACCATCACCGGAGCATCG-CTGGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGCCGGAGCATCGTC-GGA
* * ** * *
19006221 GAACCTTACCGGCGGCATTAGGG-TTC--CGA-C--A---ATCGGGGGGTGTGCTCACATGGTGT
129 GAACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGT
* ** * *
19006277 ACGATGGGCACTGGTACTTGGCCCTAATATTGGCCCGCTATCCCTCATCAAACCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
19006342 CACCCCCTTAAAGAGCACTCGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19006407 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTGTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * * *
19006472 GTGCATG-CAACAAAAATACAAGGATCACGTCTTCCAAGTTCGGGACTAAAACTCCTTTCAAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * *
19006536 AATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAATGAGTTGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
19006601 TGCCATGAAAC-T----T-----C-------A-C---G--TG----A-A-GGC-TT---------
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTATATGGCATTGGCACACAG
* *
19006627 -AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCATCTC
584 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* *
19006691 TCTGGTCGACGTAGTGCCCGCCCGCCCG---CCCGCTCGTTTCATCGGTTGGCTTAGGCATACGG
649 TCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* ** * * * ** * *
19006753 AGTTCATTGCCAGTCTAAGATTGGA-CCAGGCCGAGGGTTGCCGTATTAAGATC-AGCAGCACAT
714 AGTTCATTCCCAGTCTAAGATCAGATCGA-GCTGAGGGTTGCGGTAGCAGGATCGA-CAG-ACAC
* * * * * * * * *
19006816 AGAAGGGGACCCGGTCCATCCCCAGCTTGTCG-ATCCTGCTCTTTTGGCCGGTTGAGCACCCGCA
776 AGAAGGGGACCCGATCGAT-CCCGGCTTG-CGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
* *
19006880 CGCTCGTTCCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
839 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** *
19006930 GCATACGGAGTTCTTTCCCAGTCTAAGATCGGATCGGACCGAGGGTCACGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * *
19006995 CTAAGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCAACATCGCTGGAGCATCGTCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* *
19007060 ACCTGACCGGTGGCACTGGGGTTTCGACGATCGG-GAGGGCCGGGGGGGTGTGCGCACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAG-GGGCC-GGGGGGTGTGCGCACATGATGT
*
19007124 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
19007189 CACCCCCTCAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19007254 TGGGGACACTATTTTCAAATGGTCAC-AAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19007318 ATGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACCCCTTCTGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * *
19007383 AATTTTAAAAAATCCCGAACCGAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGTCT
454 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
19007448 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
** * * *
19007513 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACTCTGGCCA-CCTATCAATCCCATGGCT
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCAC-CT-ACCACCCTATCGAT-CCACGGC-
* * * *
19007577 TTGCGCATCTCGTCTCTCTGTGTCGGCGTAGTGCCCGCCCGCCCGCAACCACCGCGTCG-TTCGT
633 TTGCGCATCCCGTCTCTCTG-GCCGACGTAGTGCCCGCCCGCCCGC--CCCCCGC-TCGTTTCGT
* * *
19007641 CGGTT-GCTTAGGCATACGGAG-T--TTCCCA-TGCTAAGATTAGA-CG-GAC-CAGGGTT-TGG
694 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT-CTAAGATCAGATCGAG-CTGAGGGTTGCGG
* * * *
19007697 TAGCCAGGATC-ACAGGCA-AG-AGGGGACCCGA-CGAT-CCTGCTTGCG-ATACTGCCCCTTCT
757 TAG-CAGGATCGACAGACACAGAAGGGGACCCGATCGATCCCGGCTTGCGCATCCCGCCCC-TCT
*
19007756 -GCC-GCTGAGTGCCCGACTGACTGCTC-TTTCGAT--G-TG----AGG----C--A-TT-ATTC
820 GGCCGGCTGAGCGCCCG-C--AC-GCTCGTTTCG-TGGGTTGACTTAGGCATACGGAGTTCATTC
* *
19007803 GGCA--ATAA
880 -CCAGTCTAA
* * * *
19007811 G-GTGCGGAGTTTCATT-CCAGTCTAA-ATC-GACCAGACCGAGGGTTGCGACAGCACATGTTGG
1 GCATACGGAG-TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGG
* * *
19007872 GCTCGGTCGACATGTGGCTGGTGTCGCA-TTTTCTTCGTCCGGGGCACCATTG--GAAGCATCGT
65 GCTCGG--G-CATGT-GCTGGTGCCGCATTTTTCTTCGT-CGGGGCACCATCGCCGGAGCATCGT
* * * * * * * *
19007934 CGGAGAACTTGACC--CGACATTGGGGTATCCA-GA-C-GA----TCGGGGGATGAGCTCACATG
125 CGGAGAACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATG
* * *
19007990 GTGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCGCTATCCCTCATCAAACCTTGAGAA
190 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
* * *
19008055 CTCACACCCCCTTAAAGAGCATTGGAGATTTTATAGGTTTGCTACCAGTAGCCATTAAAGTGTCT
255 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
19008120 -ACAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
320 GA-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * ** *
19008184 TTTTTGTGCATGCCAACAAAAATACAAGGATCTCGTCTACCAAGTTTGGGACCAAAACTAATTTC
384 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * * * * *
19008249 AAAAAAATTTTAAAAAACCAT-AAACCGTAAAAAGTTTTAAAAATCATGAAAAATAAAAAACGAG
449 GAAAAAATTTTAAAAAATC-TCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
* * *
19008313 CCGTCTTGCCATGAAACTTCACGTGACGGCTTAA-AGACCATTGTATGAATTTACATGCCATAAA
513 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA--T---T---AT---
* * * *
19008377 AATGGCATTGGCATAAAGAAATATGAAGATGTTCCTAAACCAACCTACCACCCTATCGATCCACG
567 -ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* *** * *
19008442 GC-TACATGTCCCG-CATCTCTGGCCGGCGTAGT--------G--C-CCACCCGCTCGTTTCGTC
631 GCTTGCGCATCCCGTC-TCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTC
* * * * * * ** ** *
19008494 GGTTGGCTTAGGCATACGAAGTTCATTTCGAGTCTAATATCGGACCG-GACTGATAGTTGTAGCA
695 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGTA
* * *
19008558 GCAGGATCGACA-ACACATAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCTCGCCCCTCTG
759 GCAGGATCGACAGACAC--AGAAGGGGACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTCTG
* * * * **
19008622 GCTGACTGAGTGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGTTGTTCATTCCCAGTC
821 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
19008687 TAA
886 TAA
* * * *
19008690 GCATACGGAGTTCATTCCCAGTCTAAGATCGAATCAGA-CGAGGGATGCAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * * **
19008754 CTCGAGTGTGTGCTGGAGCCGCATTTTTCTTCGTCGGGACACCATCGCCAGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * *
19008819 ACTTGACCGGCGACATTGGGGTTTCGACGATCGG-GGGGCAGGGGGGTGTGCGCACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
19008883 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * * *
19008948 -CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCAATTAAAGTGTATGAAATA
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19009012 GGGACACTTTTTACAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
19009077 GCATGCCAACAAAAATACAA-G-----G-------AGTTTGGGGCCAAAACTCCTTCCGAAAAAA
391 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * *
19009129 TTTTATAAAATCTCAAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
456 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
19009194 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
521 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGCAT
* * * *
19009259 TGGCACACAAAAATAAGAAGATGTACCTAAACCCACCTACCACCC-ATTCGATCCACGGCTTACG
574 TGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA-TCGATCCACGGCTTGCG
* * * * *
19009323 CATCCCGTCTCTCTAGTCGATGTAGTGCCCG-CC-CCC-CCGCCCGCTCGTTTCATCGGTTGGCT
638 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGGCT
* * * * *
19009385 TAGGCATACGGAGTTCATT-CCAGTCTAAGATCGGA-CCAGACTGAGGGTTACTGTAGTAGGATC
703 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGTAGCAGGATC
** * ** * ** *
19009448 GGTAGCACATAGGGGGGGACCCGATCGATCCCCAGCTTGCGCATCCCGCTTCTCTGGCCGGTTGA
767 GACAG-ACACAGAAGGGGACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * *
19009513 ACACCCGCACGCTCGTTTCGTGGGTCGACTTAGGCATACGGAGTTCATTCCTAGTCTAA
830 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *
19009572 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTCACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * * ** * *
19009637 GTAAGGCATGTGCTGGTGTCGCATTTTTCTTCGTCCGGGTAAGATTGTCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * *
19009702 ACCAGACTGACGGCACT-GGGTTTCGACAATCGCG-GGGGCCGGGGGGTGTGCGCAAATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCG-GAGGGGCCGGGGGGTGTGCGCACATGATGTG
* * * *
19009765 CGATGGGTACTAGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACCTCGATAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
19009830 AGCACCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
** * * *
19009895 TAGGACACTATTTTCAAATGGTCAC-AAATCTTGTACACTTCAAGTTTTTAGCT-AAATTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
19009958 TGCATGCCAAAAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACCCCTTCTGAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* *
19010023 ATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATTA-AAAACGAGTTGTCT
455 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA-TAGAAAACGAGTCGTCT
*
19010087 TGCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
* *
19010152 ATTGGCATGA-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTG
572 ATTGGCA-CACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
19010216 CGCATCTCGTCTCTCTGGTCGGCGTAGTGCCCACCCGCCCGCCCGCCCACTCGTTTCGTCGGTTC
636 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCC-CCCGCTCGTTTCGTCGGTTG
* * ** * * * *
19010281 GCTTACGCATACGGAGTTCATTCCCAATCTAAGATTGGGCTGGA-CTGAGGGTTGCGGCAGTAGG
700 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA-TCAGATCGAGCTGAGGGTTGCGGTAGCAGG
* * * ** *
19010345 ATTGGCAG-CATGCAG-AGAGGGACCCGACCGATCCCCGGCTTGCGCATCCTACCCCTTTGGCCG
764 ATCGACAGACA--CAGAAG-GGGACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCG
* * **
19010408 GCTAAGCACCCGCACGCTCGTTTTATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
825 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ** *
19010472 GCATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGACAGCACATAATTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * *
19010537 CTCGGGCATGTGTTGGTGCCGCACGTTTCTTCGTTGGGGCACCATCGCTGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * * *
19010602 ACCTGACCGGTGGCATTAGGG-TT--ACG-GC-GA----TCGGGGGGTGTACTCACATGGTGTGC
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * **
19010658 AATGAGTGCTGGTACTTGGCCCTTATATTGGCCTGCTATCCCTCATCAAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19010723 CCCCCTTAAAGAGCATTGGGGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19010788 GGGACACTTTTTCCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
19010853 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAAACTACTTTCGAAAAAA
391 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
** * *
19010918 TTTTAAAAAATCTTC-AATTGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGCCTT
456 TTTTAAAAAATC-TCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
**
19010982 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-T-T-TGGCATTGGCACGTAGA
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTATATGGCATTGGCACACAGA
* * *
19011044 AATATGAAGATGTACCTAAATCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCT
585 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
*
19011109 TTGGCCGACGTAGTGCCCGCCCGCCCGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
650 CTGGCCGACGTAGTGCCCGCCCGCCCGCCC-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
*
19011174 AGTTCATTCCCAGTCTAGAGATCAGATCGAGCTGAGGGTTACGGTAGCAGGATCGACAAGACACA
714 AGTTCATTCCCAGTCTA-AGATCAGATCGAGCTGAGGGTTGCGGTAGCAGGATCGAC-AGACACA
* * * * * *
19011239 GAAGGGCACCCGGTCGATCCTCGGATTGCGCATCCCACCCCTCTGGCCGGTTGAGCGCCCGTACG
777 GAAGGGGACCCGATCGATCC-CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
*
19011304 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCGCAGTCTAA
841 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
19011352 GCATACGGAGTTCATTCCAAGTGTAAGATCGGACCGGACCAAGGCTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * *
19011417 CTCGGGCATGTGCTGGTGCTGCATTTGTCTTCGTCGGGGCACCATTACCGGAGCATCGTCGAAAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * *
19011482 ACCTGATCGACGGCATTGGGGTTTCAATGAT-GGAAGGGGCCGGGAGGGTGTGCGCACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGG-AGGGGCCGGG-GGGTGTGCGCACATGATGT
* * *
19011546 AAC-ATGGATGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCAAGAACTC
194 -GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
19011609 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * * *
19011674 ATGGGGACACTTTTTTCAAATGGTTATAAAATGTTGTACACTTCGTGTTTTTAGCTGAATTTTTT
323 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
*
19011739 TGTGCATGCCAAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
388 TGTGCATGCC-AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
** **
19011804 AAAATTTTAAAAAATCTCGAACCCCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCAC
452 AAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* * *
19011869 CTTGCCATGAAACTTCACGTGTAGGCTTAAGGGACCATTGTAAGAATTTTCAAGCAAAAAAATTG
517 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA--TT---------ATA-TG
**
19011934 GCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
570 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
19011999 GCGCATCCCATCTCTTTGGCCGACGTAGTGCCCGTCCGCCCGTCCGCCCGCTCATTTCGTCGGTT
635 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CCCCCCGCTCGTTTCGTCGGTT
* * * * * ** *
19012064 GGCTTAGGCAGACGGAGTTCATTCCGAATCTAAGATCAGACTGGA-TTGAGGGTTGCAATAGTAG
699 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-TCGAGCTGAGGGTTGCGGTAGCAG
* * * * * * *
19012128 GATTGACAG-CATGCAGAGGGGGACCCGGTTGATCCCCGGCTTACGCATCCCGCCCCTTTGGCTG
763 GATCGACAGACA--CAGAAGGGGACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCG
** * *
19012192 GCTGAGCGCCCGCACGCTTATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAG
825 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ** *
19012256 GCTTACGGAGTTCATTCCGAGTCTAAGATCGGTCCAGAGCC-AAGGTTGCGATAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CCGAGGGTTGCGGCAGCACATGCTGG
* * * * *
19012320 GCTCGAGCATGTGCTGGT-CTTGCATTTTTCTTCGTCGAGG---CAT--------CTTTGTCGGA
65 GCTCGGGCATGTGCTGGTGC-CGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGA
* * * *
19012373 GAA-CTAACCGGCGGCATTTGGGTTCCGACGATCGGGGGGGCCGAGGGGGGGTGTGCGCACATGA
129 GAACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCC---GGGGGGTGTGCGCACATGA
* *
19012437 TGTGCCATGGGTGCTAGTACTT-GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
191 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
19012501 TCACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTG
256 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
19012566 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT-TACACTTTGAGTTTTTAGCTGAATTTT
321 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* *
19012630 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGA
386 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
*
19012695 AAAAATTTT-AAAAATCTCGAACCGTAAAAGGTTTCAAAAATCGTG-AAAA-A-AAAACGAGTCG
451 AAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* *
19012756 TCTTGCCATGAAACTTCACGTCAAAGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
516 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----AT
** * *
19012821 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCGTATCGATCCATGGCT
569 GGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
19012886 TGTGCATCCCGCCTCTCTGGCCGGCGTTA-TGCCCGCCCG--C-CCCCCCGCTCGTTTCGTCGGT
634 TGCGCATCCCGTCTCTCTGGCCGACG-TAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGT
* * * * * * **
19012947 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGGCTGGA-TTGAGTGTTACAATAGCA
698 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-AGATCGAGCTGAGGGTTGCGGTAGCA
* * * * * *
19013011 GGATCGGCAG-CATGCAG-AGTGGGACCTGACCGATCCCTGGCTTGTGCATCTCGCACCTCTGGC
762 GGATCGACAGACA--CAGAAG-GGGACCCGATCGATCCC-GGCTTGCGCATCCCGCCCCTCTGGC
* * *
19013074 CGACTGAGCGCCCACACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
823 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
19013139 A
888 A
* *
19013140 G-AT-C-G-G---------A--C------C-G----GACCGATGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * *
19013179 CTCGGGCATGTGCTGGTGTTGCATTTGTCTTCGTCGGGGTACCATCACCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * *
19013244 ACCTGACTGGTC-GCATTGGGG-TTC--CG-GC-GA----TCGGGGGGTGTGCACACATGATGTG
131 ACCTGACCGG-CGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
19013299 CGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
19013364 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTAAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19013429 GGGGACACTTTTTTCAAACGGTCATAAAATCTTGTACACTTCGTGTTTTTAGCTGAATTTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
19013494 TGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAAC-CCTTTCTAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* ** * * * *
19013558 ATTTTAAAAAATCCCGAACCCCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAATCGTCTT
455 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* * * * * *
19013623 GCCATGAAACTTCACGTGCAGGCTTAAGGGTCCATTATAAGAATTTACAAGGCAAAAAATTGGAA
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT----------ATA-TGGCA
* *
19013688 TTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTACG
573 TTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * *
19013753 CATCCCATCTCTTTGGCTGACGTCGTGCCCGCCCGCCCG---CCCGCTCGTTTCATCGGTTGGCT
638 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGGCT
* * * ** *
19013815 TAGGCATACGGAGTTCATTCCCAATCTAAGAAT-GGACTGGA-CTGAGGGTTGCGACAGTAGGAT
703 TAGGCATACGGAGTTCATTCCCAGTCTAAG-ATCAGA-TCGAGCTGAGGGTTGCGGTAGCAGGAT
* * * * * *
19013878 TGACAGCACGCAG-AGGGGAACCCGATCGATCCCCGACTTACGCATCCTGCCCCTCTGGCTGGCT
766 CGACAG-ACACAGAAGGGG-ACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
19013942 GAGCGCCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
828 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
19014003 GCATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACGGATGGTTGTGCCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* **
19014068 CT--GGCA--AGCTGGTGCC-CATTTTTCTTACGTCGGGGCACCATCG-C----CATCAAC---G
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTT-CGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* * ** *
19014120 AA-CTGA-C--TGGCATTGGGG--TC-A-GCTTCGGATTGGGGAGGGGGGGTGTGTGCA-ATGAT
130 AACCTGACCGGCGGCATTGGGGTTTCGACG-ATCGGA--GGGGCCGGGGGGTGTGCGCACATGAT
* *
19014176 GTGCGATGGGTGCTGGTACTGGGCGGCTTATATTGGCCCCC-ATCCCTCATCAAA-C-C-AGAAC
192 GTGCGATGGGTGCTGGTACTTGGC-CCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
19014237 TCACACCCCCTTAAAG-GCATTTGAGATTTT-CAGGTTTGCTG-CA-AAGTCATTAAAGTGTCTG
256 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
19014298 --A---GGACAC-TTTATC-AATGGTCAC-ATATCTTGTACAC-TC-AGTTTTTAGCTGAA-TTT
321 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * * *
19014352 ATTGTGCATG--AAGAAAAAAACAAGGATC-TGTCTA-C---TTT--AG--ATAA--CCTTCCGA
386 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * * * *
19014404 AAAAATTTT-AAAAA-CCCGAACCG-AGATAGTTTAAAAAAT--TGATAAAT-GAAAACGAGTCG
451 AAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
*
19014463 T-TTGCCATGAAACTTCACGTGTAGGC-TAAGGGACCATTGTATGAATTTAACAAGCCATAAAAA
516 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT--------AT----A
*
19014526 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCACGGC
568 TGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * *
19014591 TTGCGCATCCCATCTCTCTGGTCGACGTAGTGCCCGGCCGCCCG---CCCGCTCGTTTCGTCGGT
633 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGT
** ** * * *
19014653 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTCTCTGGCCGGCATAGTGCCCGCCTGCTCGTTTT
698 TGGCTTAGGCATACGGAGTTCATTCCCAG--TCT-AAG--ATCAGA-T---CG--AGCT-G---A
* * ** * * * *
19014718 GTTAGTTG-GGTTATGCATATGG-T-GTTCATTCCCAGTCTAAGTTTGGATCAGA-CTGA----G
748 G--GGTTGCGG-TA-GC--A-GGATCG-ACAGACACAG---AAG--GGGACCCGATC-GATCCCG
* * * * * * * ** *
19014775 GGTTGTGACAGTAGGATCGGCAGCATACAGAGGGGGACTCAGC-CAATCC-C-CGACTTGCGTAT
799 GCTTGCG-CA-T----CCCGC-CCCT-CTG-GCCGG-CTGAGCGC---CCGCACG-C-T-CGT-T
* * *
19014837 CCCGCCGCTTTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
847 ----TCG--TGGGTTGAC--------------------------------TTAGGCATACGGAGT
*
19014902 TCATTCCTAGTCTAA
874 TCATTCCCAGTCTAA
* * * * *
19014917 GCATACGGAGTTCATTCCCAGTATAAGACCAGACCAGATCGAGGGTTGCGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * * *
19014982 CTCGGGCATGTGCTAGTGCCGTATTTTTCTTCATCGAGGCACGATCACCGGAGCATTGTTGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * *
19015047 ACTTAATCGGCGACATTGGGGTTCCGACGATCGG-GGGTGCCGGGGGGGGTGTGCACACATGATG
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGG-GCC--GGGGGGTGTGCGCACATGATG
* *
19015111 TGCCATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAATCCTCGAGAACTC
193 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
19015176 ACACCCCCTTAAAGAGCATTTGACATTTTGCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
19015241 ATGGGAACACTTTTTTCAAATGATCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
323 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * *
19015306 TGTGCATGCCAACAAAAATACAAGGATAATGTCTGCCAAGTTTGGGGTCAAAACTCCTTCCAAAA
388 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * **
19015371 AAATTTTAAAAAATC-CTGACCCGCAAAATGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGT
453 AAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
19015435 CTTGCCAAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAACTTACAAGCCATAAAAATG
517 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATG
* * * *
19015500 GCATTGGCTCATAGAAATATGAAGATGTGCCTAAACCCACCAACCAACCTATCGATCCACGGCTT
570 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * ** ** * * *
19015565 GCGTATCCCGTCTCTCTGGCCGGCGTAGTGCCTACCTACCTGTCCGCCCGCTCGTTTCGTCGATT
635 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG-CCCCCCGCTCGTTTCGTCGGTT
* * * *
19015630 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTAAACTGGA-CTGAGGGTTGCGGTAGCAA
699 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-TCGAGCTGAGGGTTGCGGTAGCAG
* * * * ** *
19015694 GATCGGCAGCACGCAGAGGGGGACCCGGTCGATTTTCAGCTTGCGCATCCCGCCCCTC-GGCCGG
763 GATCGACAG-ACACAGAAGGGGACCCGATCGA-TCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * *
19015758 CTGAGTGCCTGGA-GCTCGTTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
826 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * ** *** * * *
19015820 GCATACGAAGTTCATTCCCAGTTTAAGATCAAATTGGATCGAGGGTTACGGCAGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
19015885 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG---CA----C----CATCGTCGAAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * * * *
19015939 ACCTAACCGGCGGCATT-GAGTTCCGGCTATCGG-GGGTGCTGGGGGCTGTGCACACATGATGTG
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGG-GCCGGGGGGTGTGCGCACATGATGTG
* * * *
19016002 CAATGGGTGCTGATACTTGGCCCTTATATT-GCCCCCTATCCCTCATCAAACCTTGAAAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
19016066 ACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
19016131 GCGGACACTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * *
19016196 TGCATGCCAACAAAAATAAAAGGATCACATCTTCCAAGTTTGGGGCCAAAAATTCTTCCGAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
** * *
19016261 ATTAAAAAAAATCTCGAACCGTAAAAAGTTTTC-AAAATTGTGAAAAATAGAAAACGAGTCATCT
455 ATTTTAAAAAATCTCGAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * * *
19016325 TTCCATTAAACTTCACATGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGC
** * * *
19016390 ATTGGCACGTAGAAATATGAAGATGAGCCTAAACCCACCTACCACCCTATCGATCCATGGCCTGC
572 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
** * ** *
19016455 GCATCCCGTCTCTCTGGCCGGTGTAGT----GCCTGCTTG---CCTGCTCGTTTCGTCGGTTGGC
637 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGGC
* * * *
19016513 TTAGGCATACGGAGTTCATTCCCAGTTTAAGATCAGAAT--AGATGAAGGGCTGTGGTAGCAGGA
702 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ATCGAGCTG-AGGGTTGCGGTAGCAGGA
* * * * * ** *
19016576 TCGGCAGCACGCAGAGGGGGACCCGATCGATCCCCGACTTACGCATCCTACCCCTCTGGTCGGCT
765 TCGACAG-ACACAGAAGGGGACCCGATCGAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * * *
19016641 GAGCGCCCACACGCTCTTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCACTCTAA
828 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * **
19016702 GCATACGGTGTTCATTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGTGATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19016767 CTCGGGCATGAGCTGGTGCCGCATTTTTCTTTGTCAGGGCACCATCGCCGGAG-AAC--C-G-G-
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * *
19016826 ACC--A---GCGACATTAGGGTTCCGACGATCAGG-GGGGCCAGGGGGGTGTGCG-ACATGATAT
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATC-GGAGGGGCC-GGGGGGTGTGCGCACATGATGT
* ** *
19016884 GCGTTTGGGTGCTGGTGGTTGGCCCTTATATATTGG-CCCCTAT-CCTCATC-AACCTTGGAGAA
194 GCG-ATGGGTGCTGGTACTTGGCCC-T-TATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAA
* *
19016946 -TCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCT-ACAGTAGCCATTAAAGTGTCC
255 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-C
* * *
19017009 TGAAAT-GGGACACTTTTTTCAAAT-GTCACAAAACCTTGTAACATCTTCGAAATATTTAAAGCT
319 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT-ACA-CTTCG-AGT-TTT-TAGCT
* * * *
19017072 AAACTTTTTTTTATGCATGCC-A-AAAAATA-AAGGATCATGGTCTACCAAGTTCGGGTGCCAAA
379 GAA--TTTTTTTGTGCATGCCAACAAAAATACAAGGATCA-CGTCTACCAAGTTTGGG-GCCAAA
* * * ** *
19017134 A-TCCCTTCCAAAAAAATTTT-AAAAATCTCGGACCGCAAAAAGTTTTGAAAATCATGAAAAATA
440 ACT-CCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
*
19017197 GAAAACCG-GTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
504 GAAAA-CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT--
* * * *
19017261 AAGCCATAAGAATTGAATTGGCACACAGAAATATGAAGATGTACCTAAAGCCACCTACCACCCTA
565 -----AT----ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * ** *
19017326 TCGATCCACGGCTTGCGCATCCTGTCTCTCTGTCCGATATAGTGGCCGCCCGCCCGTCCGCTCGC
621 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG--C-C-C-C
* * * * *
19017391 CCGCTCGTTTCGTCTGTTAGCTTAGGCGTACGGAGTTCATTCCCAGTCTAAGATCAGACCG-GAT
681 CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAGCT
* * * * *** * *
19017455 CGAGGGATGCAGCAACAGGATCGACAGTGTGCAG-AGGGGACTCGACCGATCCTCGGCTTGCGCA
746 -GAGGGTTGCGGTAGCAGGATCGACAG-ACACAGAAGGGGACCCGATCGATCC-CGGCTTGCGCA
* * *
19017519 TCCCGACCCTCTGGCCGACTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAG
808 TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAG
*
19017584 TTCATTCCTAGTCTAA
873 TTCATTCCCAGTCTAA
* **
19017600 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19017665 CT-GGGACATGTGCTGGTGCCGTATTTTTCTTCATCGAGGCACCATCGCCGGAGCATCGTCGGAG
66 CTCGGG-CATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
** * * * *
19017729 AACCTGACCGGTAGCATTGGGGTTCCGACGATCGGGGGGGGCCAAGAGGGGTTGTGCACACATGA
130 AACCTGACCGGCGGCATTGGGGTTTCGACGATC-GGAGGGGCC--G-GGGGGTGTGCGCACATGA
* *
19017794 TGTGCGATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAAC
191 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* * * * *
19017859 TCACACCGCCTTAAAGAGCATTCGACATTTTATAGGTTTGCTGCCAGTAGCCATTGAAGTGTCTG
256 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
19017924 AAATGGGAACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTGT-GAGTTTTTAGCTGAATTT
321 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTT
* * * * * *
19017988 TTTTGTGCATGCCAAAAAAAATACAAGGATAATGTCTACCATGTTTGGGGCTAAAACTCCTTCTG
385 TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* *
19018053 AAAAAATTATAAAAAAATC-CAGAACCGTAAAAAGTTTCAAATATCAG-GAAAAATAGAAAACGA
450 AAAAAATT-TTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATC-GTGAAAAATAGAAAACGA
19018116 GTCGTCTTGCCATGAAACTTCACAG-GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
512 GTCGTCTTGCCATGAAACTTCAC-GTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT-
* * *
19018180 AAAATTGCATTGGCACACAGAAATATGAAGATGTGCTTAAGCCCACCTACCACCCTATCGATCCA
567 ---ATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * ** *
19018245 CGGCTTGCGCATCCCGTTTCTCTGGCCGATGTAGTGCCCGCCCGCCCG---CTTGCTCATTTCGT
629 CGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGT
* * * * * * * *
19018307 CAGTTGGCTTGGGCATACAGAGTTCATTTCCAGTCTAAGATCAGA-CCAGACAGAGGGTTGCTGC
694 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGT
** * * *
19018371 AGCAACATCGACAG-TAC-GTAGTGCAGGACCCGA-CTGATCCCCGGCTTGTGCATCCCGCCCCT
758 AGCAGGATCGACAGACACAGAAG-G--GGACCCGATC-GAT-CCCGGCTTGCGCATCCCGCCCCT
* * * *
19018433 CTGGCCGGCTGAGCACCCGCACGCTTGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCA
818 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
19018498 GTCTAA
883 GTCTAA
* * *** *
19018504 GCATACGGAGTTTATTCCCAGTCTAAGATCGGACAAGGTTGAGGGTTGCGGCAGCACATGCTGGA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
19018569 CTCGGGCATGAGCTGGTGCCGCATTTTTCTTTGTCGGGG---CA----C----CATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * *
19018623 ACCTGACCAGCGGCATTGGGGTTCCGACGATC-GAGGGGAACGGGGGGGTGTGCGCACATGATGT
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGG--CCGGGGGGTGTGCGCACATGATGT
* * * *
19018687 ACGATGGGTGCTGGTAGTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTTGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19018752 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19018817 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTAGAGTTTTTAGCTGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * * ** *
19018882 GTGAATGCCAACAAAAATACAAGGATAATGTCTGCCAAGTTTGGGTTCAAAACTCCTTCCAAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
19018947 AATTTTAAAAAATC-CTGAGCCGCAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGT
454 AATTTTAAAAAATCTC-GAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
**
19019010 CTTGCCAAAAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
517 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATG
* * * *
19019075 GCATTGGCTCATAGAAATATGAAGATGTGCCTAAACCCACCAACCAACCTATCGATCCACGGCTT
570 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * **
19019140 GTGTATCCCGTCTCTCTGGCTGGCGTAGT----GCCTACCCG---CCCGCTCGTTTCGTCGGTTG
635 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTG
* * * *
19019198 GCTTAGGCATACGGAGTTCATTCCCAATATAAGATCA-AACTAGACTGAGGGTTGCGGTAGCAGG
700 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAGGGTTGCGGTAGCAGG
* * * *
19019262 ATCGGCAGCACGCA-AAGGGGGACCCGGTCGATTCCCGACTTGC-CATCCCGCCCCTCTGGCCGG
764 ATCGACAG-ACACAGAA-GGGGACCCGATCGA-TCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * * *
19019325 TTGAGTGCCCG--GGTCTCGTTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
826 CTGAGCGCCCGCACG-CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * * * *
19019387 GCGTACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGCGGCAGTATATACTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
19019452 CTCGGGCATGTGCTGGTGCCACATTTTTCTT--T----G--CCA--G--GGCACCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG-AGCATCGTCGGAG
* * * * *
19019505 AACCTGACCGACGGCATT-GGGTTGCTACTATCGG-GGGGCCGAGGGGTGTGCGCACATGATGTG
130 AACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTG
* * *
19019568 CGGTGGGTGCTGATACTTGGCCCTTATATT-GCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
19019632 A--CCCTATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
260 ACCCCCT-TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19019695 TGGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTCGAGTTTTTAGCAGAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
19019760 GTGCATGCCAACAAAAATAAAAGGATCATGTCTTCCAAGTTTGGGGCCAAAACTCCATCCGAAAA
389 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *
19019825 AATTTTAAAAAATCTCGAACCGTAAAATGTTTTC-AAAATCGTAAAAAATAGAAAACGAGTCGTC
454 AATTTTAAAAAATCTCGAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
19019889 TTGCCATTAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGG
* *
19019954 TATTGGCACACAGAAATGTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
571 CATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * **
19020019 CGCATCCCGTCTCTCTGGCTGGTGTAGT----GCCTGCTTG---CCCGCTCGTTTCGTCGGTTGG
636 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGG
* * * * * * *
19020077 CTTAGGCATACAGAGTTCATTCTCTAGTTTAAGATCAGA--GTAGATGAAGGGCTACAGG-AGTA
701 CTTAGGCATACGGAGTTCATTC-CCAGTCTAAGATCAGATCG-AGCTG-AGGGTTGC-GGTAGCA
* * * * * *
19020139 GGAT-TAGCAGCCCACAGAGGGGGACCCGATCGATCCCTGGCTTGCGCATCCC-TCCCTCCGCCC
762 GGATCGA-CAG-ACACAGAAGGGGACCCGATCGATCCC-GGCTTGCGCATCCCGCCCCTCTGGCC
* * * * *
19020202 GGCTGAGTGCCCACACGCTCGTTTCATGCGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
824 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19020267 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCATG-CTGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCA-GACCGAGGGTTGCGGCAGCACATGCTGG
* * * *
19020331 GCCCGGGCATGAGCTGGTGCCGTATTTTTTTTCGTC-GGG--CCA----C----CATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* ** ** * *
19020385 AACCTAACCAACGGCATTGGGG-TTCTGGTGATCGGGGGGGCTGAGGGGGTGTGCGCACATGATG
130 AACCTGACCGGCGGCATTGGGGTTTC-GACGATCGGAGGGGCCG-GGGGGTGTGCGCACATGATG
* * *
19020449 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCAAACGTTGAGAACTC
193 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
19020514 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * * **
19020579 ATAGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAAAGTTTT
323 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * ** *
19020644 TGTGCATGCCAACAAAAATACAAGGATCATGTCTATCAGGTTTACGGCCAAAACACCTTCCGAAA
388 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * ** * *
19020709 AAAGTTTAAAAAATCTTGAACCGTAAAAAGTTTTGAAAATTGTGAAAAATAGAAAACGAGTCATC
453 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
19020774 TTGCCATAAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTAGAAGCCATAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGG
*** * * * * *
19020839 CATTGGCATGGAGAAATAAGAGGATGTGCCTAAACCCACCTTCAACCCTATCGATTCACGGCTTG
571 CATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * ** * * * *
19020904 CGCATCCCATCTCTCAGATCGGCGTAGTGCCCGCCCACCCG----TCGACTCGTTTCGTCGGTTA
636 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCG-CTCGTTTCGTCGGTTG
* * * * *
19020965 GCTTAGGCATACGGAGTTCATTCCCAGT-TAAGGT-TGAACCAGACCG-GTGGTTGCGGTAGCAG
700 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGAG-CTGAG-GGTTGCGGTAGCAG
* * * * * *
19021027 GATCGGCAG-CATGCAGAAGGGGACTCGATTGATCCCTAGCTTACGCATCCCGCCCCTCTGGTCG
763 GATCGACAGACA--CAGAAGGGGACCCGATCGATCCC-GGCTTGCGCATCCCGCCCCTCTGGCCG
* * * *
19021091 ACTGACCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCTTACGGAGTTCATTCCCAGTCTAA
825 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
19021155 GCATACGGAGTTCATTCCCAGTCTAACATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19021220 CTTGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCTGGAGCACCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * **
19021285 ACTTGACCGGCGGCATTGGGG-TTCCA-G-T--GA----TCGGGGGGTGTGCGCACATGATGTAT
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
19021341 GATGGGAGCTGGTATTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
19021406 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGAGTCTGAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
19021471 GGGACACTTTTTTCAAATGGTCATAAAATCTTGAACACTTCTAGTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
19021536 GCATGCCAAAAAAAATACAAGCATCACGTCTACCAAGTTTGGGGCCAAAAATCCTCCCGAAAAAA
391 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* **
19021601 TTTTAAAAAATCACGAACCGTAAAAAGTTTCAAAAATTTTGAAAAATAGAAAACGAGTCGTCTTG
456 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
19021666 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGACATAAAAATGGCAT
521 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TT-------AT----ATGGCAT
***
19021731 TGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
574 TGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * *
19021796 ATCCCGTCTCTCTGGTCGACGTAGTGCCCGCCCGCCCG---CCCACTCATTTCGTCGGTTGCCTT
639 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGGCTT
* * * **
19021858 AGGCATACGGAGTTCATTCCTAGTCTAAGATTC-GATCG-GATCGAAGGTTGCGACAGCAGGATC
704 AGGCATACGGAGTTCATTCCCAGTCTAAGA-TCAGATCGAGCT-GAGGGTTGCGGTAGCAGGATC
*
19021921 -ACTAG-CACGTAGAAGGGGACCCGATCGAT-CCGTGACTTGCGCATCCCGCCCCTCTGGCCGGT
767 GAC-AGACAC--AGAAGGGGACCCGATCGATCCCG-G-CTTGCGCATCCCGCCCCTCTGGCCGGC
* * * *
19021983 TGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTTCCAGTCTAA
827 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
19022045 GCATACGAAGTTCATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * ** * *
19022110 CTCGGGCATATGCTGGTGCCCCA-TTTTCTTCGTCGAGGCACCATCGTTGGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * *
19022174 ATCGGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGTTGTGCGCACATGATGTGC
131 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
19022239 AATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAGA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
19022304 CCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
19022369 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * **
19022434 GCAAGCCAA-AACAAATACAAGGATCATGTCTACCTTGTTTGGGGCCAAAACTCCTTCCGAAAAA
391 GCATGCCAACAA-AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* ** ** * * * **
19022498 ATTTTAAAAAATCTCGAACCGAAAAAAGTTTTGAAAATTATGAAAAATAAAAAATGGGTTATCTT
455 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
19022563 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
19022608 TACAAGCCAT
Statistics
Matches: 20980, Mismatches: 2637, Indels: 2003
0.82 0.10 0.08
Matches are distributed among these distances:
836 1 0.00
837 286 0.01
838 16 0.00
840 6 0.00
841 9 0.00
842 20 0.00
843 169 0.01
844 13 0.00
845 83 0.00
846 43 0.00
847 297 0.01
848 11 0.00
849 5 0.00
850 15 0.00
851 7 0.00
852 16 0.00
853 16 0.00
854 4 0.00
855 7 0.00
856 15 0.00
857 11 0.00
858 107 0.01
859 166 0.01
860 131 0.01
861 97 0.00
862 40 0.00
863 353 0.02
864 120 0.01
865 41 0.00
866 38 0.00
867 25 0.00
868 21 0.00
869 28 0.00
870 249 0.01
871 186 0.01
872 11 0.00
873 139 0.01
874 179 0.01
875 38 0.00
876 23 0.00
877 60 0.00
878 770 0.04
879 495 0.02
880 712 0.03
881 292 0.01
882 425 0.02
883 518 0.02
884 434 0.02
885 514 0.02
886 180 0.01
887 369 0.02
888 741 0.04
889 1076 0.05
890 945 0.05
891 535 0.03
892 514 0.02
893 223 0.01
894 550 0.03
895 552 0.03
896 45 0.00
897 797 0.04
898 1199 0.06
899 226 0.01
900 360 0.02
901 148 0.01
902 189 0.01
903 567 0.03
904 835 0.04
905 627 0.03
906 344 0.02
907 22 0.00
908 33 0.00
909 519 0.02
910 49 0.00
911 224 0.01
912 42 0.00
913 73 0.00
914 123 0.01
915 14 0.00
916 6 0.00
917 1 0.00
918 68 0.00
919 11 0.00
920 1 0.00
921 1 0.00
923 5 0.00
924 1 0.00
925 3 0.00
926 13 0.00
927 473 0.02
928 200 0.01
929 39 0.00
930 120 0.01
931 7 0.00
932 1 0.00
933 117 0.01
934 40 0.00
935 7 0.00
936 1 0.00
937 23 0.00
938 13 0.00
939 11 0.00
940 2 0.00
941 17 0.00
942 3 0.00
943 2 0.00
944 2 0.00
945 1 0.00
946 9 0.00
947 9 0.00
948 9 0.00
949 13 0.00
950 4 0.00
951 17 0.00
952 19 0.00
953 1 0.00
954 17 0.00
955 7 0.00
956 7 0.00
957 10 0.00
958 2 0.00
959 9 0.00
960 2 0.00
961 2 0.00
963 3 0.00
964 1 0.00
965 18 0.00
966 6 0.00
967 6 0.00
968 12 0.00
970 7 0.00
971 16 0.00
972 131 0.01
973 22 0.00
974 3 0.00
976 46 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTATATGGCATTGGCACACAGAA
ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
TGGCCGACGTAGTGCCCGCCCGCCCGCCCCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
TTCATTCCCAGTCTAAGATCAGATCGAGCTGAGGGTTGCGGTAGCAGGATCGACAGACACAGAAG
GGGACCCGATCGATCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGT
TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:19012266 original size:26 final size:26
Alignment explanation
Indices: 19012227--19012280 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
19012217 TGGGTTGACT
19012227 TAGGCATACAGAGTTCATTCCCAGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
* * *
19012253 TAGGCTTACGGAGTTCATTCCGAGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
19012279 TA
1 TA
19012281 AGATCGGTCC
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.24, C:0.24, G:0.22, T:0.30
Consensus pattern (26 bp):
TAGGCATACAGAGTTCATTCCCAGTC
Found at i:19014013 original size:26 final size:26
Alignment explanation
Indices: 19013977--19014029 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19013967 GTTGACTTAG
19013977 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
19014003 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19014029 G
1 G
19014030 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19014927 original size:26 final size:26
Alignment explanation
Indices: 19014891--19014943 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19014881 GTTGACTTAG
* *
19014891 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
19014917 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
19014943 G
1 G
19014944 ACCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:19015831 original size:26 final size:26
Alignment explanation
Indices: 19015794--19015846 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19015784 TTTGACTTAG
*
19015794 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19015820 GCATACGAAGTTCATTCCCAGTTTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19015846 G
1 G
19015847 ATCAAATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19016714 original size:26 final size:26
Alignment explanation
Indices: 19016676--19016728 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19016666 GTTGACTTAG
*
19016676 GCATACAGAGTTCATTCTCACTCTAA
1 GCATACAGAGTTCATTCCCACTCTAA
* * *
19016702 GCATACGGTGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCACTCTAA
19016728 G
1 G
19016729 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.26, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCACTCTAA
Found at i:19017082 original size:888 final size:882
Alignment explanation
Indices: 19014676--19030697 Score: 10823
Period size: 903 Copynumber: 17.6 Consensus size: 882
19014666 CGGAGTTCAT
* * * ** * *
19014676 TCCCAGTCTCTCTGGCCGGCATA--G--TGCCCGCCTGCTCGTTTTGTTAGTTGGGTTATGCATA
1 TCCC-GTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
* * ** * * * * *
19014737 TGGTGTTCATTCCCAGTCTAAG-TTTGGATCAGACTGAGGGTTGTGACAGTAGGATCGGCAGCAT
65 CGGAGTTCATTCCCAGTCTAAGATCAGAAT-AGA-TGAGGGTTGCGGCAGCAGGATCGGCAGCAC
* * * * * * * * *
19014801 ACAGAGGGGGACTC-AGCCAATCCCCGACTTGCGTATCCCGCCGCTTTGGTCGACTGAGCGCCCG
128 GCAGAGGGGGACCCGA-TCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
*
19014865 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTC
192 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
* * * *
19014930 ATTCCCAGTATAAGACCAGACCA-GATCGAGGGTTGCGGCAGCACATGTTGGGCTCGGGCATGTG
257 ATTCCCAGTCTAAGATCAGACCAGGCT-GAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTG
* * * * * *** *
19014994 CTAGTGCCGTATTTTTCTTCATCGAGGCACGATCACCGGAGCATTGTTGGAGAACTTAATCGGCG
321 CTGGTGCCGCATTTTTCTTCGTCG-GGCACCATCGCCGGAG-A---ACCG-G-AC-----CAGCG
* * * *
19015059 ACATTGGGGTTCCGACGATCGGGGGTGCCGGGGGGGGTGTGCACACATGATGTGCCATGGGTGCT
374 GCATTGGGGTTCCGACGATCGGGGG-GCC-AGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* *
19015124 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAATCCTCGAGAACTCACACCCCCTTAAA
437 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAA
* * *
19015189 GAGCATTTGACATTTTGCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGAACACTTT
502 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
19015254 TTTCAAATGATCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
567 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * * *
19015319 AAAAATACAAGGATAATGTCTGCCAAGTTTGGGGTCAAAACTCCTTCCAAAAAAATTTTAAAAAA
632 AAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * * * *
19015384 TC-CTGACCCGCAAAATGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAAGAAAC
697 TCTC-GAACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
19015448 TTCACGTGAAGGCTTAAGGGACCATTGTATGAACTTACAAGCCATAAAAATGGCATTGGCTCATA
761 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATA
* * *
19015513 GAAATATGAAGATGTGCCTAAACCCACCAACCAACCTATCGATCCACGGCTTGCGTA
826 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* *
19015570 TCCCGTCTCTCTGGCCGGCGTAGTGCCTACCTACCTGTCCGCCCGCTCGTTTCGTCGATTGGCTT
1 TCCCGTCTCTCTGGCCGGCGTAGTG--------CCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * * *
19015635 AGGCATACGGAGTTCATTCCCAGTCTAAGATTA-AACTGGACTGAGGGTTGCGGTAGCAAGATCG
58 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAA-TAGA-TGAGGGTTGCGGCAGCAGGATCG
* ***
19015699 GCAGCACGCAGAGGGGGACCCGGTCGATTTTC-AGCTTGCGCATCCCGCCCCTC-GGCCGGCTGA
121 GCAGCACGCAGAGGGGGACCCGATCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * *
19015762 GTGCCTGGA-GCTCGTTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC
185 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC
* * *** * * *
19015826 GAAGTTCATTCCCAGTTTAAGATCA-AATTGGATCGAGGGTTACGGCAGCACATACTGGGCTCGG
250 GGAGTTCATTCCCAGTCTAAGATCAGACCAGGCT-GAGGGTTGCGGCAGCACATGCTGGGCTCGG
* * * ** *
19015890 GCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGAAGAACCTAACCGGCGGCAT
314 GCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAGAACCGGACCAGCGGCAT
* * * * * * * *
19015955 T-GAGTTCCGGCTATCGGGGGTG-CTGGGGGCTGTGCACACATGATGTGCAATGGGTGCTGATAC
378 TGGGGTTCCGACGATCGGGGG-GCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
* *
19016018 TTGGCCCTTATATT-GCCCCCTATCCCTCATCAAACCTTGAAAACTCACACCCTCTTAAAGAGCA
442 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCA
*
19016082 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGCGGACACTTTTTTCA
507 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
*
19016147 AATGCTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAA
572 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAA
* ** * * * **
19016212 TAAAAGGATCACATCTTCCAAGTTTGGGGCCAAAAATTCTTCCGAAAAAATTAAAAAAAATCTCG
637 TACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCG
* * * * *
19016277 AACCGTAAAAAGTTTTCAAAATTGTGAAAAATAGAAAACGAGTCATCTTTCCATTAAACTTCACA
702 AACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
* *
19016342 TGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATA
767 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATA
* * *
19016407 TGAAGATGAGCCTAAACCCACCTACCACCCTATCGATCCATGGCCTGCGCA
832 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* ** *
19016458 TCCCGTCTCTCTGGCCGGTGTAGTGCCTGCTTGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATAC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * *
19016523 GGAGTTCATTCCCAGTTTAAGATCAGAATAGATGAAGGGCTGTGGTAGCAGGATCGGCAGCACGC
66 GGAGTTCATTCCCAGTCTAAGATCAGAATAGATG-AGGGTTGCGGCAGCAGGATCGGCAGCACGC
* ** * *
19016588 AGAGGGGGACCCGATCGATCCCCGACTTACGCATCCTACCCCTCTGGTCGGCTGAGCGCCCACAC
130 AGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* * * * *
19016653 GCTCTTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCTCACTCTAAGCATACGGTGTTCATT
195 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* ** *
19016718 CCCAGTCTAAGATCAGACCAGGCTGAGGGTTGTGATAGCACATGCTGGGCTCGGGCATGAGCTGG
260 CCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGG
* * *
19016783 TGCCGCATTTTTCTTTGTCAGGGCACCATCGCCGGAGAACCGGACCAGCGACATTAGGGTTCCGA
325 TGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAGAACCGGACCAGCGGCATTGGGGTTCCGA
* * **
19016848 CGATCAGGGGGGCCAGGGGGGTGTGCG-ACATGATATGCGTTTGGGTGCTGGTGGTTGGCCCTTA
389 CGATC-GGGGGGCCAGGGGGGTGTGCGCACATGATGTGCG-ATGGGTGCTGGTACTTGGCCC-T-
19016912 TATATTGG-CCCCTAT-CCTCATC-AACCTTGGAGAA-TCACACCCCCTTAAAGAGCATTTGAGA
450 TATATTGGCCCCCTATCCCTCATCAAACCTT-GAGAACTCACACCCCCTTAAAGAGCATTTGAGA
* *
19016973 TTTTATAGGTTTGCT-ACAGTAGCCATTAAAGTGTCCTGAAAT-GGGACACTTTTTTCAAAT-GT
514 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-CTGAAATGGGGACACTTTTTTCAAATGGT
* * * * *
19017035 CACAAAACCTTGTAACATCTTCGAAATATTTAAAGCTAAACTTTTTTTTATGCATGCC-A-AAAA
578 CACAAAATCTTGT-ACA-CTTCG-AGT-TTT-TAGCTGAA--TTTTTTTGTGCATGCCAACAAAA
* *
19017098 ATA-AAGGATCATGGTCTACCAAGTTCGGGTGCCAAAA-TCCCTTCCAAAAAAATTTT-AAAAAT
636 ATACAAGGATCAT-GTCTACCAAGTTTGGG-GCCAAAACT-CCTTCCGAAAAAATTTTAAAAAAT
* * * * *
19017160 CTCGGACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACCG-GTCATCTTGCCATGAAACT
698 CTCGAACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAA-CGAGTCGTCTTGCCATGAAACT
* * * *
19017224 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAGAATTGAATTGGCACACAG
762 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAG
* *
19017289 AAATATGAAGATGTACCTAAAGCCACCTACCACCCTATCGATCCACGGCTTGCGCA
827 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * *** * * *
19017345 TCCTGTCTCTCTGTCCGATATAGTGGCCGCCCGCCCGTCCGCTCGCCCGCTCGTTTCGTCTGTTA
1 TCCCGTCTCTCTGGCCGGCGTAGT--------G-CC-T--GCCCGCCCGCTCGTTTCGTCGGTTG
* *** * * *
19017410 GCTTAGGCGTACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGATGCAGCAACAGGA
54 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAATAGAT-GAGGGTTGCGGCAGCAGGA
* *** * * * * * *
19017475 TCGACAGTGTGCAGA-GGGGACTCGACCGATCCTCGGCTTGCGCATCCCGACCCTCTGGCCGACT
118 TCGGCAGCACGCAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
19017539 GAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCAT
183 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
* *
19017604 ACGGAGTTCATTCCCAGTCTAAGATCAGA-CTGGACCGAGGGTTGCGGCAGCACATGCTGGGCT-
248 ACGGAGTTCATTCCCAGTCTAAGATCAGACCAGG-CTGAGGGTTGCGGCAGCACATGCTGGGCTC
* * *
19017667 GGGACATGTGCTGGTGCCGTATTTTTCTTCATCGAGGCACCATCGCCGGAGCATCGTCGGAGAAC
312 GGG-CATGTGCTGGTGCCGCATTTTTCTTCGTCG-GGCACCATCGCCGGAG-AAC--C-G-G-AC
* * *
19017732 CTGACCGGTAGCATTGGGGTTCCGACGATCGGGGGGGGCCAAGAGGGGTTGTGCACACATGATGT
369 C--AGC-G--GCATTGGGGTTCCGACGATC--GGGGGGCC-AG-GGGGGTGTGCGCACATGATGT
* * *
19017797 GCGATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCA
425 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
* * * * *
19017862 CACCGCCTTAAAGAGCATTCGACATTTTATAGGTTTGCTGCCAGTAGCCATTGAAGTGTCTGAAA
490 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
19017927 TGGGAACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTGT-GAGTTTTTAGCTGAATTTTTT
555 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTTTTT
* * * * *
19017991 TGTGCATGCCAAAAAAAATACAAGGATAATGTCTACCATGTTTGGGGCTAAAACTCCTTCTGAAA
619 TGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
*
19018056 AAATTATAAAAAAATC-CAGAACCGTAAAAAG-TTTCAAATATCAG-GAAAAATAGAAAACGAGT
684 AAATT-TTAAAAAATCTC-GAACCGTAAAAAGTTTTCAAA-ATC-GTGAAAAATAGAAAACGAGT
19018118 CGTCTTGCCATGAAACTTCACAG-GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
745 CGTCTTGCCATGAAACTTCAC-GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * * *
19018182 AATTGCATTGGCACACAGAAATATGAAGATGTGCTTAAGCCCACCTACCACCCTATCGATCCACG
809 AATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
19018247 GCTTGCGCA
874 GCTTGCGCA
* ** * * * *
19018256 TCCCGTTTCTCTGGCCGATGTAGTGCCCGCCCGCCCGCTTGCTCATTTCGTCAGTTGGCTTGGGC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCG-CC-C--GCTCGTTTCGTCGGTTGGCTTAGGC
* * ** * * ** * *
19018321 ATACAGAGTTCATTTCCAGTCTAAGATCAGACCAGACAGAGGGTTGCTGCAGCAACATCGACAGT
62 ATACGGAGTTCATTCCCAGTCTAAGATCAGAATAGA-TGAGGGTTGCGGCAGCAGGATCGGCAGC
* * ** * * *
19018386 ACGTAGTGCAGGACCCGA-CTGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCACC
126 ACGCAGAGGGGGACCCGATC-GATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
* * *
19018450 CGCACGCTTGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGT
190 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGT
* * * * * *
19018515 TTATTCCCAGTCTAAGATCGGACAAGGTTGAGGGTTGCGGCAGCACATGCTGGACTCGGGCATGA
255 TCATTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGT
* * *
19018580 GCTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCGTCGGAGAACCTGACCAGCGGCATTGGGGT
320 GCTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAGAACCGGACCAGCGGCATTGGGGT
** * * *
19018645 TCCGACGATCGAGGGGAACGGGGGGGTGTGCGCACATGATGTACGATGGGTGCTGGTAGTTGGCC
384 TCCGACGATCG-GGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCC
*
19018710 CTTATATTGGTCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAG
448 CTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAG
*
19018775 ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAATGGGGACACTTTTTTCAAATGGT
513 ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGT
* *
19018840 CACAAAATCTTGTACACTTAGAGTTTTTAGCTGAATTTTTTTGTGAATGCCAACAAAAATACAAG
578 CACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAG
* * ** * *
19018905 GATAATGTCTGCCAAGTTTGGGTTCAAAACTCCTTCCAAAAAAATTTTAAAAAATC-CTGAGCCG
643 GATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTC-GAACCG
* **
19018969 CAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAAAAAACTTCACGTGAAG
707 TAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
*
19019034 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCTCATAGAAATATGAAG
772 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAG
* * * *
19019099 ATGTGCCTAAACCCACCAACCAACCTATCGATCCACGGCTTGTGTA
837 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* *
19019145 TCCCGTCTCTCTGGCTGGCGTAGTGCCTACCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * *
19019210 GGAGTTCATTCCCAATATAAGATCA-AACTAGACTGAGGGTTGCGGTAGCAGGATCGGCAGCACG
66 GGAGTTCATTCCCAGTCTAAGATCAGAA-TAGA-TGAGGGTTGCGGCAGCAGGATCGGCAGCACG
* * * * *
19019274 CAAAGGGGGACCCGGTCGATTCCCGACTTGC-CATCCCGCCCCTCTGGCCGGTTGAGTGCCCG--
129 CAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
* * *
19019336 GGTCTCGTTTCGTGGTTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCGTACGGAGTTCA
194 CG-CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
* * * * * *
19019401 TTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGCGGCAGTATATACTAGGCTCGGGCATGTGCT
258 TTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCT
* * * * * *
19019466 GGTGCCACATTTTTCTTTGCCAGGGCACCATCGTCGGAGAACCTGACC-GACGGCATT-GGGTTG
323 GGTGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAGAACCGGACCAG-CGGCATTGGGGTTC
* * * * *
19019529 CTACTATCGGGGGGCC-GAGGGGTGTGCGCACATGATGTGCGGTGGGTGCTGATACTTGGCCCTT
386 CGACGATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
19019593 ATATT-GCCCCCTATCCCTCATCAAACCTTGAGAACTCACA--CCCTATAAAGAGCATTTGAGAT
451 ATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCT-TAAAGAGCATTTGAGAT
*
19019655 TTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTTA
515 TTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCA
* *
19019720 CAAAATCTTGTACACTTCGAGTTTTTAGCAGAATTTTTTTGTGCATGCCAACAAAAATAAAAGGA
580 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA
* *
19019785 TCATGTCTTCCAAGTTTGGGGCCAAAACTCCATCCGAAAAAATTTTAAAAAATCTCGAACCGTAA
645 TCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAA
* * * *
19019850 AATGTTTTCAAAATCGTAAAAAATAGAAAACGAGTCGTCTTGCCATTAAACTTCACATGAAGGCT
710 AAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
* * *
19019915 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGTATTGGCACACAGAAATGTGAAGATG
775 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATG
19019980 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
840 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * **
19020023 TCCCGTCTCTCTGGCTGGTGTAGTGCCTGCTTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * * * * * ** *
19020088 AGAGTTCATTCTCTAGTTTAAGATCAGAGTAGATGAAGGGCTACAGG-AGTAGGATTAGCAGCCC
66 GGAGTTCATTC-CCAGTCTAAGATCAGAATAGATG-AGGGTTGC-GGCAGCAGGATCGGCAGCAC
* * * * * * * *
19020152 ACAGAGGGGGACCCGATCGATCCCTGGCTTGCGCATCCC-TCCCTCCGCCCGGCTGAGTGCCCAC
128 GCAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGC
* * * *
19020216 ACGCTCGTTTCATGCGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATATGGAGTTCA
193 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
* * * *
19020281 TTCCCAGTCTAAGATCGGACCATGCTGAGGGTTGCGGCAGCACATGCTGGGCCCGGGCATGAGCT
258 TTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCT
* * * ** * *
19020346 GGTGCCGTATTTTTTTTCGTCGGGCCACCATCGTCGGAGAACCTAACCAACGGCATTGGGGTTCT
323 GGTGCCGCATTTTTCTTCGTCGGG-CACCATCGCCGGAGAACCGGACCAGCGGCATTGGGGTTCC
** * *
19020411 GGTGATCGGGGGGGCTGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
387 GACGATCGGGGGGCCAG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* *
19020476 ATATTGGCCCCCTATCTCTCATCAAACGTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
451 ATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
* *
19020541 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATTGTCAC
516 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
* **
19020606 AAAATCTTGTACACTTGGAGTTTTTAGCTGAAAGTTTTTGTGCATGCCAACAAAAATACAAGGAT
581 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGAT
* * ** * * *
19020671 CATGTCTATCAGGTTTACGGCCAAAACACCTTCCGAAAAAAGTTTAAAAAATCTTGAACCGTAAA
646 CATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAA
* * * *
19020736 AAGTTTTGAAAATTGTGAAAAATAGAAAACGAGTCATCTTGCCATAAAACTTCACGTGAAGGCTT
711 AAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
* * *** * *
19020801 AAAGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGGAGAAATAAGAGGATGT
776 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGT
* * *
19020866 GCCTAAACCCACCTTCAACCCTATCGATTCACGGCTTGCGCA
841 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * ** * * *
19020908 TCCCATCTCTCAGATCGGCGTAGTGCCCGCCCACCCGTCGACTCGTTTCGTCGGTTAGCTTAGGC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCC-GCC--CG-CTCGTTTCGTCGGTTGGCTTAGGC
* * * * *
19020973 ATACGGAGTTCATTCCCAGT-TAAGGT-TGAACCAGACCG-GTGGTTGCGGTAGCAGGATCGGCA
62 ATACGGAGTTCATTCCCAGTCTAAGATCAGAA-TAGA-TGAG-GGTTGCGGCAGCAGGATCGGCA
* * * * * * * * *
19021035 GCATGCAGAAGGGGACTCGATTGAT-CCCTAGCTTACGCATCCCGCCCCTCTGGTCGACTGACCG
124 GCACGCAGAGGGGGACCCGATCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* *
19021099 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCTTACGGAGTTCATTCCCAGTCTAAGCATACGGA
188 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * * * *
19021164 GTTCATTCCCAGTCTAACATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTAGGCTTGGGCAT
253 GTTCATTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
* ** *
19021229 GTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCTGGAGCACCGTCGGAGAACTTGACCG
318 GTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCAT--C----G---C--CGGAGAACCGGACCA
** ** *
19021294 GCGGCATTGGGGTTCC-A-G-T-----GATC-GGGGGGTGTGCGCACATGATGTATGATGGGAGC
371 GCGGCATTGGGGTTCCGACGATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
* * *
19021350 TGGTATTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
436 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAA
* *
19021415 AGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGAGTCTGAAATGGGGACACTT
501 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * *
19021480 TTTTCAAATGGTCATAAAATCTTGAACACTTCTAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
566 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * * * *
19021545 AAAAAATACAAGCATCACGTCTACCAAGTTTGGGGCCAAAAATCCTCCCGAAAAAATTTTAAAAA
631 CAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* **
19021610 ATCACGAACCGTAAAAAG-TTTCAAAAATTTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
696 ATCTCGAACCGTAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * **
19021674 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGACATAAAAATGGCATTGGCATGT
760 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAT
19021739 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
825 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * * *
19021797 TCCCGTCTCTCTGGTCGACGTAGTGCCCGCCCGCCCGCCCACTCATTTCGTCGGTTGCCTTAGGC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCG----CTCGTTTCGTCGGTTGGCTTAGGC
* * * * *
19021862 ATACGGAGTTCATTCCTAGTCTAAGATTC-G-ATCGGATCGAAGGTTGCGACAGCAGGATC-ACT
62 ATACGGAGTTCATTCCCAGTCTAAGA-TCAGAAT-AGAT-GAGGGTTGCGGCAGCAGGATCGGC-
* * ** * *
19021924 AGCACGTAGAAGGGGACCCGATCGATCCGTGACTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCA
123 AGCACGCAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * *
19021989 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTTCCAGTCTAAGCATACGAA
188 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * *
19022054 GTTCATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
253 GTTCATTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
* * * *
19022119 ATGCTGGTGCCCCA-TTTTCTTCGTCGAGGCACCATCGTTGGAGCATCGCCAGAGAATCGGACCG
318 GTGCTGGTGCCGCATTTTTCTTCGTCG-GGCACCATC------GC--CG---GAGAACCGGACCA
* *
19022183 GCGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGTTGTGCGCACATGATGTGCAATGGGTG
371 GCGGCATTGGGGTTCCGACGATC-GGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * *
19022247 CTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAGACCCCCTTA
435 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTA
* *
19022312 AAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACT
500 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
*
19022377 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCA
565 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
**
19022442 A-AACAAATACAAGGATCATGTCTACCTTGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
630 ACAA-AAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* * ** * * * **
19022506 AAATCTCGAACCGAAAAAAGTTTTGAAAATTATGAAAAATAAAAAATGGGTTATCTTGCCATGAA
694 AAATCTCGAACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
*
19022571 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAGAATGGCATTGGCACA
759 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG--CA
*** * * *** * ***** **
19022636 CATAGGTTTGTTGCCAGTAGCCATTAATGTGTCTGAAATGGGGACATTTTTTTCAAATCG-TCAC
822 CATAGAAAT-ATG--A--AG------ATGTGCCT-AAA--CCCAC-CTACCACCCTATCGATC-C
*** * *
19022700 AAAATCTTGTACACT
871 -ACGGCTTG--CGCA
* * * ******** * ** **** ** ***** *
19022715 TCGCGTTTTTAGCTAAATTTTTTTA-TGCGTGCCAACAAAAATACAAGGATCATGTCTACCAAGT
1 TCCCGTCTCT--CT-GGCCGGCGTAGTGCCTGCCCGC-CCGCT-C--GTTTC--GTC-GGTTGGC
* * * ** * *** * * *** ** * ** **
19022779 TTGGGGCCA-A---AATTCCTT-CCA--AAAAAATTTTAAAAAAT-CCCG-AACCGCAAAATGTT
56 TT-AGG-CATACGGAGTTCATTCCCAGTCTAAGATCAGAATAGATGAGGGTTGCGGCAGCA-GGA
*** ** * * *** * ** * * * * * *** * * *
19022835 TCAAAAATG-GTGAAAAATAGAAAACGAGTC-ATCTTGCCATGAAATTTCACGTGAAG-GCTTAA
118 TC-GGCA-GCACGCAGAGGGGGACCCGA-TCGATC---CC-CG-ACTTGCGCATCCCGCCCCT-C
* ** ****** * * **** * * ** *
19022897 GGGACC-ATTGTATGAATTTACAAGC-CATAAAAATGGCATTGGCACGTAGAAATATGAAGATGT
174 TGG-CCGGCTG-A-GCGCCCGCACGCTCGT-TTCGTGG-GTT-G-ACTTAGGCATACG--GA-GT
* ** * * * * * * ** * *
19022960 GCCTAAACCCACCTTCCACCCTATCGATCCATGG-CTTGCACATCCC-GTCTCTCTG-GCCGACA
229 -TC-ATTCCCA--GTCTA----AGC-AT--ACGGAGTT-CA-TTCCCAG--TCTAAGATCAGAC-
* ** * *
19023022 TAGTGCTGGCCCACCCGTCCGCTCGTTTCGTCGGTTGGCTTAGTCATAC-GGAGTTCATTCCCAG
278 CAG-GCT-G---A---G---G---G-TT-G-CGG-CAGC--A--CATGCTGG-G--C--T--CGG
* * *** ** * * ** * * ***
19023086 TCTAAGATCGGACTGG-AAAG-ATGGTT-TT-GGCAGTAGCATTAACAGCACGTAGAGGGGGACC
314 GC-ATG-T--G-CTGGTGCCGCATTTTTCTTCGTC-G-GGCACCATC-GC-CGGAGAACCGGACC
* * * * ** *** * * * * * * * *
19023147 --CGATCGATCCTCGGCTTGC-AC-ATCCCGCCCCTCTGGCCGGCTGAGAGCCTGCACGCTTGTT
370 AGCG-GC-AT--TGGGGTTCCGACGATCGGGGGGC-CAGG-GGGGTGTGCG-C-ACATG-ATG-T
* * **** * * * *
19023208 TCG-TGGGT--T-G-ACTTAGG--C--ATA-CGGAGTTC-ATTCC-CAGTCTAAGCATATG-GAG
425 GCGATGGGTGCTGGTACTT-GGCCCTTATATTGGCCCCCTATCCCTCA-TC-AAACCT-TGAGAA
* ** ** ** * * * ** * * * **
19023260 TTCATTCCCAGTCGAAGATCGA-ATCAGA--CCA-AGGGTTACGGTAGCACATGCTGGGCTCAGG
486 CTCACACCCCCTTAAAGAGC-ATTTGAGATTTTACA-GGTT-TGCT-GC-CA-G-T-AGC-CATT
* * * ** * *** * * * *
19023321 CATGTGTTTG---T-GCCACATTTTTCTTCATCGGGGCAC--CATCATCGGAGCA-TTACCGGAG
542 AAAGTGTCTGAAATGGGGACACTTTT-TTCAAATGGTCACAAAATC-TTGTA-CACTT--C-GAG
** * * * * ** * ****** * *
19023379 AACTTGACCGGCGGTATTGGGGTTCCG-GCGATTAGAAGGCCGGGAGGGGTGTGCGCACATGATG
601 -TTTTTA---GCTGAATT---TTTTTGTGC-A-T-----GCC--AACAAAAAT--ACA-AGGA--
* * ** * ** * * * *** * **
19023443 TGCGATGGCT-GCTGGTACTT-GGCCCTTATATTGGCCCCCTATCTCTCATCAACCCTCT-CGAA
645 T-C-ATGTCTACCAAGT--TTGGGGCC--A-A---AACTCCT-TC-C-GA-AAAAATTTTAAAAA
* * * * * * ** ** * * *
19023505 CTCAC-ACCCAGTTAAAGAGAATTTGAGATTTTACAGGTTTGCTACCAGTACCCATTAA--AGT-
696 ATCTCGAACC-G-TAAAAAG-TTTTCA-A-AAT-C--G--TG--AAAAATA--GA-AAACGAGTC
** * *** * * ** * * **
19023566 GTC-TGAAATTGGGACACTT-TTTTCAAATGG-TCACA-AAATC-TTGTACACTTCGAGTTT-TT
746 GTCTTGCCA-T--GAAACTTCACGT-GAA-GGCTTA-AGGGACCATTGT--A--T-GAATTTACA
* ***** * * * ** * * *
19023625 AGCTGAATTGTTTTGTGCA-TGGCA-AAAAAAATA-CAAGGAT-CACGTATACCAAGTTTGGGGC
800 AGC--CATAAAAATG-GCATTGGCACATAGAAATATGAA-GATGTGCCTAAACCCA--------C
* ** * * *** **** ****
19023686 CAAAAATCCTTTC-AAAAAAATTTTAAAAAA
853 CTACCACCCTATCGATCCACGGCTT-GCGCA
* * ** *** *** * ** **** ** *
19023716 TCCCGAACTGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAG-TCGTCTTGCAAT-GAAA
1 TCCCG-TCTCT---CTG-GCCG-GCGTAGTG---CCT-GCCCGCCCGCTCGT-TT-C-GTCG---
* ** * * * ** ** * * * * * **
19023779 CTTTACGTGAAGGCTTAAGG-GACCATTGCATAAATTTACA-AGCCATAA-AAATG-GCATTGGC
50 GTTGGC-T-TAGGCATACGGAGTTCATT-C-CCAGTCTA-AGA-TCAGAATAGATGAGGGTT-GC
* * * * ****** * * * *
19023840 ACGCAGAAATATGAAGAT-GTGCCTA-AACCCA-CCTACCACCCTATCGATCCACGGCTTGCACA
108 -GGCAG---CA-G--GATCG-G-C-AGCACGCAGAGGGGGACCCGATCGATCCCCGACTTGCGCA
* * * * * * * * *
19023902 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCTTTTCGTAGATTGGCTTAGGCATAC
163 TCCCGCCCCTCTGGCCGGC-T-GAG--CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
* * **
19023967 GAAGTTCATT-CCAGTCTAAGATCGAATCAGACCGAGGGTT-A-TGGCAG-C-AAGATTGACAGC
224 GGAGTTCATTCCCAGTCTAAG--C--AT---A-CG-GAGTTCATTCCCAGTCTAAGA-T--CAG-
* ** ** * * * * ** * *
19024027 ATGCAAAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC-CG-GCTGAGTGC
276 A--C-CAGGCTGA---GG--G-T-TGCGGC-AGCACATGCTG-GGCTCGGGCATGTGCTG-GTG-
* * ** * *** ** ** *
19024090 CCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTTATTCATAGTCTAACCATA-CAGA
327 CCGCA---T-TTTTC-T---TCG--TCGGGC--AC-CA---TCGCCGGAG---AACCGGACCAGC
* *** ** ** * ** * * *
19024154 GTTCATTCCCAGTCTAAGATCGAATC--GGATCGAGGGTCGTG-GCAGCACATGCTG-G-GCTCG
373 G-GCATT-GGGGT-TCCGA-CG-ATCGGGGGGCCAGGGGGGTGTGC-GCACATGATGTGCGATGG
* * ** ** * * * *
19024214 G-GCAT-GTGCTGGTGCCGCATT-T-TTCTCTACCGAGGTACCATCGTCGTAGTATCACC-GGAG
432 GTGC-TGGTACTTG-GCC-C-TTATATTGGCCCCCTA--T-CCCTCATC--A--A--ACCTTGAG
* ** * *** ** * **** * **
19024274 AACTTGAC-CGGTGGCATTGGGGTTCCA-TCGATCGGGGGGT-CGGGGGGTG-TGAACGCATGAT
484 AAC-TCACAC---CCCCTTAAAG-AGCATTTGA---GATTTTAC-AGGTTTGCTG--C-CA-G-T
* * **** * * ** * **
19024335 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
535 -AGCCATTAAAG-T-GT-C-T-G-----AAATGGGGACACT-T---TTTTCAAA---TG-G---T
**** ** * * * *
19024400 CACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCCGCCAGTAGCCATTAAAGTGTCTGA
578 CACAAAATCTTGTACA-C-TTCGAG---TT-----TTT--AG-C--T-G-AATT----T-T-T--
* * * ** ** ** * * ** *** * **
19024465 AATGGGGACACCTTTTTCAAATGGTCACAA-AATCTTGTAC-ACTTTGAGTTTTTAGCTGAATTT
618 -TTGTGCATGCC---AACAAA-AAT-ACAAGGATCATGT-CTAC--CAAGTTTGGGGC-CAA-AA
* ** * * * ** *
19024528 TTTTTTGCATGCCAAGAAAA--CTAAAAGGATCAT-G--CC-TACCAAGTTTGGGGCCGAAAATC
672 CTCCTT-C---CGAA-AAAATTTTAAAA-AATC-TCGAACCGTAAAAAGTTT----TC-AAAAT-
* * * * ** ** *
19024587 CTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAAATTTGAAAAAT-A-GAA
724 C-GT-G-AAAAA---TAGAAAA---CG-A--GT----CGTCTTG--CCA--TGAAACTTCACG-T
* ** * * * *** * *
19024650 GACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
768 GA--AG--G-CTT---AAGGGAC--CA--T---TG--T-A-TGA--ATT-TA-CAAGCCATAA-A
* **
19024715 CATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
809 AAT------GGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
** **
19024780 TCCATAGCTTATGCA
868 TCCACGGCTTGCGCA
*
19024795 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCTGCCCGCCCGCCCGCCCTCTCGTTTCGTCGGTTG
1 TCCCGTCTCTCTGGCCGGCGTAGT----GCCT----GCCCGCCCG----CTCGTTTCGTCGGTTG
** ** ** *
19024860 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-GAACCGAACCAAGGGTTATGGAAGCAGG
54 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAATAG-A-TGAGGGTTGCGGCAGCAGG
* * ** *
19024924 ATCAGCAGCACACAGAGGGGGACCCGATCGATCCCC-AGCTTGCGCATCCTACCCCTCTGGCCGA
117 ATCGGCAGCACGCAGAGGGGGACCCGATCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGG
* * * *
19024988 CTGAGCGCTCGTACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAACC
181 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* ** * * * *
19025053 ATACGGAGTTAATTCCCAGTCTAAGATTGGACC--G-AGAGGGTTACGACAGCACATGCTGGGCG
246 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCT
* * ** * *
19025115 CGGGCATGTGCTGGTGCCACATTTTTCTTCGTTGGGGCACCATCATCGGAGAACCTGACC-GACT
311 CGGGCATGTGCTGGTGCCGCATTTTTCTTCG-TCGGGCACCATCGCCGGAGAACCGGACCAG-CG
* *
19025179 GCATTGGGGTTCTGACGATCGGGGGAACC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
374 GCATTGGGGTTCCGACGATCGGGGG-GCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* * * *
19025243 GTACTTGGCTCTTATATTGGCCCCCTATCCCTCATTAAACCTCGAGAACTCACATCCCCTTAAAG
438 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAG
* ** *
19025308 AGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCGCTAAAGTGTCTGAAATGGGGACAATTTT
503 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * * *
19025373 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTTAAATGTTTTGTGCATGCCAAGA
568 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* * * *
19025438 AAAATAAAAGGATTATGCCTACCAAGTTTGGGGCCGAAAA-TCCTTTCGAAAAAATTTTAAAAAA
633 AAAATACAAGGATCATGTCTACCAAGTTTGGGGCC-AAAACTCCTTCCGAAAAAATTTTAAAAAA
* * * * *
19025502 TCCCGAACTGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAGACGAGTCGTCTTGCCATTAAACT
697 TCTCGAACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* ***
19025567 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGGCATTGGCATGCAG
762 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAG
* *
19025632 AAATATGAAGATTTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTGCGCA
827 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * * *
19025688 TCCCGTCTCTCTGGCCGACGTACTGCCCGCCCGTCCGCCCGCTCATTTCGTCGATTGGCTTAGGC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTG--C--CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * *** * * * * *
19025753 ATACGGAGTTCATTCCTAGTCTATGATCGGACCGGACCGAGTGTTACGGCAGCAAGATTGGCAGC
62 ATACGGAGTTCATTCCCAGTCTAAGATCAGAATAGA-TGAGGGTTGCGGCAGCAGGATCGGCAGC
* * * * * *
19025818 ACGCAGAGGGGGACCC-AGCCGATCCCC-AGCTTGAGCGTCCCGACCCTTTGGCCGGCAGAGCGC
126 ACGCAGAGGGGGACCCGA-TCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGC
* *
19025881 CCGGACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAG
189 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAG
* * * *
19025946 TTCATTCCCAGTCTAAGATCGGACC-GAACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCAT
254 TTCATTCCCAGTCTAAGATCAGACCAG-GCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
* * * * * *
19026010 GTGCTGGTGCCGCATTTTTCTTCGCCGGGGTACCATCACCGGAGAACCTGA-TAGACGGCATTGA
318 GTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAGAACCGGACCAG-CGGCATTGG
* * *
19026074 GGTTCCGGCGATCGGGGCGCC-GAGGGGGTGCGCGCACATGATGTGCGATGGGTGCTGGTACTTG
381 GGTTCCGACGATCGGGGGGCCAG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
** * * *
19026138 GCCCTTATATT-GCCCCCTATCCCTCATCAAACCTCCAGAACTCAAACCGCCTTAAAGATCATTT
445 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTT
*
19026202 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTGAAAT
510 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
* *
19026267 GGTCACAAAATCTTGTACACTTCGAATTTTTAGCTGAATTTTTTCGTGCATGCCAACAAAAATAC
575 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
* * * * * *
19026332 AAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCATCCAAAAAAATGTTAAAAAATCTTGAAC
640 AAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAAC
* * ** * *
19026397 CGCAAAGAG-TTTCAAAAATTATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCATGTG
705 CGTAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTG
* ***
19026461 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGTATTGGCATGCAGAAATATG
769 AAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATG
19026526 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
834 AAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * *
19026575 TCCCGTCTCTCTGGCGGACGCAGTGCCAGCCCGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTT
1 TCCCGTCTCTCTGGCCG--GC-GT---AG--TGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTT
* * * *** * * * * *
19026640 AGGTATACGGAGTTCATTCCCACTCTATGATCAGACCGGACCGAGTGTTACAGCAGCAAGATTC-
58 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAATAGA-TGAGGGTTGCGGCAGCAGGA-TCG
* * * * *
19026704 ACAGCACGC-GAAGGGGAACCC-AGCCGATCCCC-AGCTT-CAGCGTCCCGCCCCTTTGGCCGGC
121 GCAGCACGCAG-AGGGGGACCCGA-TCGATCCCCGA-CTTGC-GCATCCCGCCCCTCTGGCCGGC
* * * *
19026765 TGAGCGCCCGTACGCTCGTTTCATGGGTTGACTTAGGAATACGGAGTTCATTCCCCGTCTAAGCA
182 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * * * * * * *
19026830 TACGAAGTTCATTCCCAGTCTAAGATCAGA-CTGGACCGAGGCTTGCAGTAGCACATTCTAGGCC
247 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGG-CTGAGGGTTGCGGCAGCACATGCTGGGCT
* * * * *
19026894 CGAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACAATCACCGGAGCATCGTCGGAGAAC
311 CGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAG-AAC--C-G-G-AC
** * * *
19026959 CTGACCGACAACATTGGGGTTCTGACGATCGGGGGGGCC-GAGGGGTGTGCGCACAGGATGTGCG
369 C--A--G-CGGCATTGGGGTTCCGACGATC-GGGGGGCCAGGGGGGTGTGCGCACATGATGTGCG
* **
19027023 ATGGGTGCCGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
428 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAC
* * *
19027088 CCCCTTAAAGAGCTTTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAATGG
493 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
19027153 GGACACTTTTTTGAAATGGTCACAAAATCTTGTACACTTCGAATTTTTAGCTGAATTTTTTCGTG
558 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
19027218 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
623 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * *
19027283 TTTAACAAATCTCAAACCGTAAAAA-TTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTG
688 TTTAAAAAATCTCGAACCGTAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
19027347 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGTAT
752 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
** * * *
19027412 TGGCACGCAGAGATATGAAGATGTGCCTAAACCCATCTACGACCCTATCGATCCACGGCTTGCGC
817 TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
19027477 A
882 A
** * * * * *
19027478 TTTCATCTCTCTGGTCGGCGGAGTGCCCGCCCGCCCACCCACCCTCTCGTTTCGTCGGTTGGCTT
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCG--------CCCGCTCGTTTCGTCGGTTGGCTT
* * * * * *
19027543 AGGCATACGGAGTTGATTCCCAGTCTAAGATCCG-ATCAGACTAAGGGTTGCAGAAGTAGGATCG
58 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAAT-AGA-TGAGGGTTGCGGCAGCAGGATCG
** * * * * *
19027607 ATAGCACGCAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTTGAG
121 GCAGCACGCAGAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* *
19027672 CGCCCGTACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
186 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * * * * * *
19027737 GAGTTCATTTCCAATCTAAGATCGGATC-GGATCGAGGGTTGCGGTAGCACATGCTGGGCTCGAG
251 GAGTTCATTCCCAGTCTAAGATCAGACCAGGCT-GAGGGTTGCGGCAGCACATGCTGGGCTCGGG
* * * *
19027801 CATGTGCTGGTGCTGCATTTTTCTTCGTCGAGGCACCATTGTCGGAGCATCGTCGGAGAACCTAA
315 CATGTGCTGGTGCCGCATTTTTCTTCGTCG-GGCACCATCGCCGGAG-AAC--C-G-G-ACC--A
* *
19027866 TCGACGGCATTGCGGTTCCGACGATCGGGGGGGCCAGGGGGGGTGTGCGCACATGATGTGCAATG
371 --G-CGGCATTGGGGTTCCGACGATC-GGGGGGCCA-GGGGGGTGTGCGCACATGATGTGCGATG
* * *
19027931 GGTGCTGGTACATGGCCATTATATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC
431 GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCC
* *
19027995 CTAAAAGAGCATTTGGGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
496 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
* *
19028060 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTGTGCAT
561 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAT
** * * *
19028125 GCCAACAAAAATACAAGGATCACCTCTACCATGTTTGGGGCTAAAACTCCTTCCGAAAAAA-TTA
626 GCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTT
* * * * * * *
19028189 AAAAAATCCCGAATCGTAAAAAGTTTTGAAAGTCGTGAAAAATAAAAAACAAGTCGTCTTGTCAT
691 AAAAAATCTCGAACCGTAAAAAGTTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
* *
19028254 GAAACTTAACGTGAATGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
756 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
*** * * * * *
19028319 ATGCAGAAATATGATGATGTGCCTAAACCCACCTGCGACCCTATCGATCCACGACTTGTGCA
821 ACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * *
19028381 TCCCGTCTCTTTGGTCGGCGTAGTGCTCGACCGCCCGTCTGCTCGCTCGTTTCGTCGGTTGGATT
1 TCCCGTCTCTCTGGCCGGCGTAGTG--C--CTGCCCG-C--C-CGCTCGTTTCGTCGGTTGGCTT
** * *
19028446 AGGCATACGGA-TTGCATTCCCAGTCTAAGATCAG-ACCGAACTAAGGGTTGCGGCAGCAAGATC
58 AGGCATACGGAGTT-CATTCCCAGTCTAAGATCAGAATAG-A-TGAGGGTTGCGGCAGCAGGATC
* * ** * * * * ** * *
19028509 GGCAACATGCAGAGGCAGACCCAACCGATCTCC-AGCTTGTGCATCCTACCCCTCTGGTCGACTG
120 GGCAGCACGCAGAGGGGGACCCGATCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGGCTG
* * **
19028573 AGCGCCCGCACGCTCATTTCGTGGGTCGACTTAGGCATACAAAGTTCATTCCCAGTCTAAGCATA
184 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATA
* * * * * * * *
19028638 TGCAGTTCATTCCCATTCTAAGATCGGACAAGACCGAGGGTTGCGGCAGCACATGCTGGACTCGG
249 CGGAGTTCATTCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGG
*
19028703 GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATGTCGGAGCATCGCCGAAGAACCTGA
314 GCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCA--TC---GC--CG--G-AGAACCGGA
* * ** *
19028768 CC-GATGACATTGGGGTTCCGGTGATC--GGGG-C-----GGTGTG-GACACATGATGCGCGATG
368 CCAG-CGGCATTGGGGTTCCGACGATCGGGGGGCCAGGGGGGTGTGCG-CACATGATGTGCGATG
* * * *
19028823 GGTGCTGGTACTTGGCCCTTATATTGACCCCCTATCCCTCATCAAAGCTCGAGAACTCACACCGC
431 GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCC
* *
19028888 TTTAAAGAGCATTTGAGATTTTACGGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
496 CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
*
19028953 CACTTTTTTCAAATGGTCACAAAATATTGTACACTTCGA-TTTTATAGCTGAATTTTTTTGTGCA
561 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT-TAGCTGAATTTTTTTGTGCA
* **
19029017 TGCCATCAAAAATACAAGGATCACCTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
625 TGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
* * * * *
19029082 TACAAAATCTCAAACCGCAAAAAG-TTTCAAAAATTGTGAAAAATAGAAAACGAGTCGACTTGCC
690 TAAAAAATCTCGAACCGTAAAAAGTTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
19029146 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
754 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
*** * * * *
19029211 GCATGCAGAAATATAAAGACGTGCCTAAACTCC-CCTACCACCCTATCGATCCACGACTTGCGCG
819 GCACATAGAAATATGAAGATGTGCCTAAAC-CCACCTACCACCCTATCGATCCACGGCTTGCGCA
** * * *
19029275 TCCCGTCTCTCTGGTAGGCGTAGTACCTGGCCGCCCGCTCCCTCGATCATTTCATCGGTTGGCTT
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCG----CTCG----TTTCGTCGGTTGGCTT
* * * *
19029340 AGGCATACGGAGTTCATTCCCAGTCTAAAATCAG-ATCGGACCGAGGGTTGCGGCAGCAAGATCG
58 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAAT-AGA-TGAGGGTTGCGGCAGCAGGATCG
* * * * *
19029404 ACAGCACCCAAAGGGGGACCCGA-CTGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGA
121 GCAGCACGCAGAGGGGGACCCGATC-GATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * ** * * *
19029468 GCACCCGCATGTTCCCTTCGTGGGTTGACTTAGGTATACAGAGTTCATTCCCAATCTAAGCATAC
185 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC
** * * * * *
19029533 GGAGTTCATTCCCAGTCTAAGATTGGACCAGACCT-AGGGTTGCAGCAGTAAATGCTAGGCTCGG
250 GGAGTTCATTCCCAGTCTAAGATCAGACCAG-GCTGAGGGTTGCGGCAGCACATGCTGGGCTCGG
* * ** *
19029597 GCATGTGTTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGTTGGAGCATCGTCAGAGAACCTG
314 GCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCATC------GC--CG---GAGAACCGG
* * *
19029662 A-CAGGCGACATAGGGGTTCC-AGCGATCGGGCGGGCCGAGGGGGGTGTGCGCACAAGATGTGCG
367 ACCA-GCGGCATTGGGGTTCCGA-CGATCGGG-GGGCC-AGGGGGGTGTGCGCACATGATGTGCG
* *
19029725 ATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCGCAC
428 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAC
* * * *
19029790 CCCCTTAAAGAGCATTTGAGAGTTGACAGGTTTGCTGTCAGTAGCCTTTAAAGTGTCTGAAATGG
493 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * * * *
19029855 GGACACTTTTTCCAAATGGTCACAAAATCTTGTACACTTCAAGCTTTTAGTTGAATTTTTTTATG
558 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
*
19029920 CATACCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
623 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * *
19029985 TTTAAAAAATCCCGAACCGTAAAAAG-TTTCAAATATTGTGAAAAATAGAAAACAAGTCGTCTTG
688 TTTAAAAAATCTCGAACCGTAAAAAGTTTTCAAA-ATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
19030049 CCATGAAACTTCACTTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
752 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
19030114 TGGCACGTAGAAATATGAAGATGAGCCTAAACCCACCTACCATCCC-GTCGATCCACGGCTTGCG
817 TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCCTATCGATCCACGGCTTGCG
*
19030178 TA
881 CA
* * * *
19030180 T-CCGTCTCTCTGGCCGGCGCA--G--TGCCCGTCCGCTTGTTTCATCGGTTGGCTTAGGCATAC
1 TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * ** * *
19030240 AGAGTTCATTCCCAATCTAAGATCGGACCAGACCGAGGGTTGCGACAGCAGGATCGGCAGCACGC
66 GGAGTTCATTCCCAGTCTAAGATCAGAATAGA-TGAGGGTTGCGGCAGCAGGATCGGCAGCACGC
* * * *
19030305 GGAGGGGGACCCAACCGATCCCC-AGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCA
130 AGAGGGGGACCCGATCGATCCCCGA-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
* * * *
19030369 CGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAATGTAAG-AT-C-G-G-----
194 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCAT
* *
19030425 ----A--CT--G----GA-C---C-GAGGGTTGCAGCAGCACATGCTGGACTCGGGCATGTGCTG
259 TCCCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTG
* * *
19030473 GTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGAACCTGACCAGCGGCATTGGGGTTCGG
324 GTGCCGCATTTTTCTTCGTC-GGGCACCATCGCCGGAGAACCGGACCAGCGGCATTGGGGTTCCG
* * * * * * *
19030538 GCGATCGAGAGGGCCGGGGGGGTGTGCACACATGATGTGCAATGGGCGCTAGTACTTGGCCCTTA
388 ACGATCG-GGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
*
19030603 TATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTT
452 TATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* ** *
19030668 TACAAGTTTGCTGATAGTAGCAATTAAAGT
517 TACAGGTTTGCTGCCAGTAGCCATTAAAGT
19030698 ATCTAAAAAG
Statistics
Matches: 12053, Mismatches: 2220, Indels: 1750
0.75 0.14 0.11
Matches are distributed among these distances:
854 129 0.01
855 34 0.00
856 3 0.00
858 2 0.00
860 2 0.00
866 62 0.01
870 1 0.00
871 2 0.00
875 1 0.00
877 6 0.00
878 429 0.04
879 120 0.01
880 336 0.03
881 38 0.00
882 181 0.02
883 275 0.02
884 154 0.01
885 687 0.06
886 57 0.00
887 668 0.06
888 756 0.06
889 865 0.07
890 489 0.04
891 324 0.03
892 244 0.02
893 342 0.03
894 449 0.04
895 58 0.00
896 12 0.00
897 17 0.00
898 576 0.05
899 128 0.01
900 26 0.00
901 9 0.00
902 101 0.01
903 1419 0.12
904 459 0.04
905 589 0.05
906 13 0.00
907 11 0.00
908 18 0.00
909 38 0.00
910 57 0.00
911 214 0.02
912 46 0.00
913 69 0.01
914 41 0.00
915 29 0.00
916 9 0.00
917 15 0.00
918 22 0.00
919 2 0.00
920 14 0.00
921 15 0.00
922 20 0.00
923 10 0.00
924 15 0.00
925 4 0.00
926 6 0.00
927 8 0.00
929 2 0.00
930 4 0.00
931 1 0.00
932 5 0.00
933 2 0.00
934 3 0.00
936 5 0.00
938 2 0.00
939 7 0.00
940 3 0.00
941 6 0.00
942 8 0.00
943 11 0.00
944 5 0.00
945 8 0.00
946 5 0.00
947 1 0.00
948 9 0.00
949 3 0.00
951 10 0.00
952 4 0.00
953 7 0.00
954 4 0.00
957 7 0.00
958 2 0.00
959 2 0.00
960 11 0.00
961 11 0.00
962 29 0.00
963 23 0.00
964 18 0.00
965 22 0.00
966 15 0.00
967 27 0.00
968 5 0.00
969 7 0.00
970 14 0.00
971 6 0.00
972 3 0.00
973 10 0.00
974 9 0.00
975 3 0.00
976 4 0.00
978 2 0.00
979 3 0.00
981 7 0.00
982 1 0.00
983 12 0.00
984 6 0.00
985 2 0.00
986 2 0.00
987 8 0.00
988 10 0.00
989 3 0.00
990 7 0.00
991 5 0.00
992 3 0.00
993 2 0.00
994 12 0.00
995 3 0.00
996 8 0.00
997 10 0.00
998 12 0.00
999 9 0.00
1000 12 0.00
1001 13 0.00
1002 20 0.00
1003 13 0.00
1004 15 0.00
1005 19 0.00
1006 19 0.00
1007 21 0.00
1008 17 0.00
1009 29 0.00
1010 23 0.00
1011 10 0.00
1012 15 0.00
1013 10 0.00
1014 18 0.00
1015 29 0.00
1016 20 0.00
1017 13 0.00
1018 8 0.00
1019 10 0.00
1020 13 0.00
1021 32 0.00
1022 16 0.00
1023 35 0.00
1024 226 0.02
1025 274 0.02
1026 301 0.02
1027 246 0.02
1028 203 0.02
1029 224 0.02
1030 294 0.02
1031 171 0.01
1032 230 0.02
1033 172 0.01
1034 144 0.01
1035 99 0.01
1036 140 0.01
1037 134 0.01
1038 260 0.02
1039 142 0.01
1040 184 0.02
1041 179 0.01
1042 142 0.01
1043 118 0.01
1044 96 0.01
1045 98 0.01
1046 107 0.01
1047 292 0.02
1048 288 0.02
1049 61 0.01
1050 61 0.01
1051 87 0.01
1052 62 0.01
1053 210 0.02
1054 57 0.00
1055 59 0.00
1056 44 0.00
1057 38 0.00
1058 44 0.00
1059 142 0.01
1060 178 0.01
1061 55 0.00
1062 56 0.00
1063 37 0.00
1064 111 0.01
1065 88 0.01
1066 45 0.00
1067 34 0.00
1068 98 0.01
1069 99 0.01
1070 70 0.01
1071 95 0.01
1072 165 0.01
1073 130 0.01
1074 61 0.01
1075 141 0.01
1076 45 0.00
1077 54 0.00
1078 35 0.00
1079 47 0.00
1080 23 0.00
1081 13 0.00
1082 6 0.00
1083 8 0.00
1084 12 0.00
1085 86 0.01
1086 360 0.03
1087 15 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (882 bp):
TCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
GGAGTTCATTCCCAGTCTAAGATCAGAATAGATGAGGGTTGCGGCAGCAGGATCGGCAGCACGCA
GAGGGGGACCCGATCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
CCAGTCTAAGATCAGACCAGGCTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
GCCGCATTTTTCTTCGTCGGGCACCATCGCCGGAGAACCGGACCAGCGGCATTGGGGTTCCGACG
ATCGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
GGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGT
CTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTT
TTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTA
AACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
Found at i:19017610 original size:26 final size:26
Alignment explanation
Indices: 19017574--19017626 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19017564 GTTGACTTAG
*
19017574 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19017600 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19017626 G
1 G
19017627 ATCAGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19018508 original size:26 final size:26
Alignment explanation
Indices: 19018478--19018530 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19018468 GTTGACTTAG
19018478 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
19018504 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19018530 G
1 G
19018531 ATCGGACAAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19019400 original size:26 final size:26
Alignment explanation
Indices: 19019364--19019413 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
19019354 GACTTAGGCA
19019364 TACGGAGTTCATTCCCAGTCTAAGCG
1 TACGGAGTTCATTCCCAGTCTAAGCG
19019390 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
19019414 ATCAAACCAG
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.24, C:0.26, G:0.22, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCG
Found at i:19020271 original size:26 final size:26
Alignment explanation
Indices: 19020241--19020293 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19020231 GTTGACTTAG
19020241 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
**
19020267 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19020293 G
1 G
19020294 ATCGGACCAT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19021162 original size:26 final size:25
Alignment explanation
Indices: 19021132--19021187 Score: 96
Period size: 26 Copynumber: 2.2 Consensus size: 25
19021122 GACTTAGGCT
19021132 TACGGAGTTCATTCCCAGTCTAAGCA
1 TACGGAGTTCATTCCCAGTCTAA-CA
19021158 TACGGAGTTCATTCCCAGTCTAACA
1 TACGGAGTTCATTCCCAGTCTAACA
19021183 T-CGGA
1 TACGGA
19021188 CTAGACCGAG
Statistics
Matches: 30, Mismatches: 0, Indels: 2
0.94 0.00 0.06
Matches are distributed among these distances:
24 4 0.13
25 3 0.10
26 23 0.77
ACGTcount: A:0.27, C:0.27, G:0.20, T:0.27
Consensus pattern (25 bp):
TACGGAGTTCATTCCCAGTCTAACA
Found at i:19022049 original size:26 final size:26
Alignment explanation
Indices: 19022019--19022071 Score: 74
Period size: 26 Copynumber: 2.0 Consensus size: 26
19022009 GTTGACTTAG
19022019 GCATAC-AGAGTTCATTTCC-AGTCTAA
1 GCATACGA-AGTTCA-TTCCTAGTCTAA
19022045 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
19022071 G
1 G
19022072 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 0, Indels: 4
0.86 0.00 0.14
Matches are distributed among these distances:
25 4 0.16
26 20 0.80
27 1 0.04
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCTAGTCTAA
Found at i:19022886 original size:307 final size:307
Alignment explanation
Indices: 19022332--19022941 Score: 961
Period size: 307 Copynumber: 2.0 Consensus size: 307
19022322 GAGATTTTAC
*
19022332 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAA
1 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATCGTCACAAAA
* *
19022397 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAACAAATACAAGGATCATG
66 TCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTATGCAAGCCAAAACAAATACAAGGATCATG
** * *
19022462 TCTACCTTGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGAAAAAAGT
131 TCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGAAAAAAGT
** * * * *
19022527 TTTGAAAATTATGAAAAATAAAAAATGGGTTATCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
196 TTCAAAAATGATGAAAAATAAAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
*
19022592 GACCATTGTATGAATTTACAAGCCATAAGAATGGCATTGGCACACAT
261 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAT
* * * *
19022639 AGGTTTGTTGCCAGTAGCCATTAATGTGTCTGAAATGGGGACATTTTTTTCAAATCGTCACAAAA
1 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATCGTCACAAAA
* **
19022704 TCTTGTACACTTCGCGTTTTTAGCTAAATTTTTTTATGCGTGCCAACAA-AAATACAAGGATCAT
66 TCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTATGCAAGCCAA-AACAAATACAAGGATCAT
* * *
19022768 GTCTACCAAGTTTGGGGCCAAAATTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAATG
130 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGAAAAAAG
* * *
19022833 TTTCAAAAATGGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAATTTCACGTGAAGGCTTAAG
195 TTTCAAAAATGATGAAAAATAAAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAG
19022898 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAC
260 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAC
19022942 GTAGAAATAT
Statistics
Matches: 275, Mismatches: 27, Indels: 2
0.90 0.09 0.01
Matches are distributed among these distances:
307 273 0.99
308 2 0.01
ACGTcount: A:0.35, C:0.17, G:0.18, T:0.29
Consensus pattern (307 bp):
AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATCGTCACAAAA
TCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTATGCAAGCCAAAACAAATACAAGGATCATG
TCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGAAAAAAGT
TTCAAAAATGATGAAAAATAAAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAT
Found at i:19024149 original size:26 final size:26
Alignment explanation
Indices: 19024120--19024170 Score: 66
Period size: 26 Copynumber: 2.0 Consensus size: 26
19024110 TTGACTTAGG
* * *
19024120 CATACGGAGTTTATTCATAGTCTAAC
1 CATACAGAGTTCATTCACAGTCTAAC
*
19024146 CATACAGAGTTCATTCCCAGTCTAA
1 CATACAGAGTTCATTCACAGTCTAA
19024171 GATCGAATCG
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.31, C:0.24, G:0.14, T:0.31
Consensus pattern (26 bp):
CATACAGAGTTCATTCACAGTCTAAC
Found at i:19025056 original size:26 final size:26
Alignment explanation
Indices: 19025026--19025076 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
19025016 TTGACTTAGG
*
19025026 CATACGGAGTTCATTCCCAGTCTAAC
1 CATACGGAGTTAATTCCCAGTCTAAC
19025052 CATACGGAGTTAATTCCCAGTCTAA
1 CATACGGAGTTAATTCCCAGTCTAA
19025077 GATTGGACCG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.27, G:0.16, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTAATTCCCAGTCTAAC
Found at i:19025946 original size:26 final size:26
Alignment explanation
Indices: 19025910--19025962 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19025900 GTTGACTTAG
*
19025910 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19025936 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19025962 G
1 G
19025963 ATCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19026833 original size:26 final size:26
Alignment explanation
Indices: 19026803--19026853 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
19026793 TGACTTAGGA
* *
19026803 ATACGGAGTTCATTCCCCGTCTAAGC
1 ATACGAAGTTCATTCCCAGTCTAAGC
19026829 ATACGAAGTTCATTCCCAGTCTAAG
1 ATACGAAGTTCATTCCCAGTCTAAG
19026854 ATCAGACTGG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.27, G:0.18, T:0.27
Consensus pattern (26 bp):
ATACGAAGTTCATTCCCAGTCTAAGC
Found at i:19027733 original size:26 final size:26
Alignment explanation
Indices: 19027704--19027756 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19027694 GTTGACTTAG
*
19027704 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
19027730 GCATACGGAGTTCATTTCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
19027756 G
1 G
19027757 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:19029539 original size:26 final size:26
Alignment explanation
Indices: 19029503--19029553 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
19029493 TGACTTAGGT
19029503 ATACAGAGTTCATTCCCAATCTAAGC
1 ATACAGAGTTCATTCCCAATCTAAGC
* *
19029529 ATACGGAGTTCATTCCCAGTCTAAG
1 ATACAGAGTTCATTCCCAATCTAAG
19029554 ATTGGACCAG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.25, G:0.16, T:0.27
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAATCTAAGC
Found at i:19032026 original size:26 final size:26
Alignment explanation
Indices: 19031990--19032042 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
19031980 GTTGACTTAG
* *
19031990 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
19032016 GCATACGGAGTTCACTCCCAGTCTAA
1 GCATACGGAGTTCACTCCCAGTCTAA
19032042 G
1 G
19032043 ATCAGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCACTCCCAGTCTAA
Found at i:19032461 original size:899 final size:899
Alignment explanation
Indices: 19030701--19037686 Score: 8669
Period size: 900 Copynumber: 7.8 Consensus size: 899
19030691 TTAAAGTATC
* * *
19030701 TAAAAAGTTTCGAAAATCATGAAAAATAAAAAACTAGTCGTCTTGCCATGAAACTTCACGTGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* *
19030766 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGCCATTGGCACGTAGAAATATGAAG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
*
19030831 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTTTGGCCGGC
131 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* * ** * ** *
19030896 ATAGTGCCCGCCCGCTCGCCCGCCCGCTTGTTTCATTAGTTAGCTTAGGCATACCAAGTTCATTA
196 GTAGTGCCCG--C-C-CGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTC
* * *
19030961 CCAGTCTAAGATC-AGCTCAGACGGAAGGTT-----A-C--GA-C---AGCACGCAGAGGGGGAC
257 CCAGTCTAAGATCGAAC-CAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGGAC
* * * * * * * *
19031013 CTGGCCGATCCCCGGCTTGCGCATCCCGCACCTCTGGTCGGCTAAGCGCCTGCACGTTCGTTTCG
321 CCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
* * * *
19031078 TGGGTTAACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAATCCAA
386 TGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* * *
19031143 GATCAGACCGGACCGAGGGTTAG-GACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATT
451 GATCAGACCGAACCGAGGGTT-GCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATT
* * * *
19031207 TTTCTTCACCGGGGCACCATCGCTGGAGCATCG-CTGGAGAGCCTGATCGGCGGCATTGGGGTTC
515 TTTCTTCACCGGGGCACCATCGCCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGGGTTC
* * * * * **
19031271 TGG-TATCGGGGGGGCTGGGGGGGTGTGCGCACATGATGTGCGATGGGTTCTGGTACTTCTCCCT
579 CGGCGATC-GGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
* * * *
19031335 TATATTGGCCCCATATCCCTCATCAAACCTTGAGAACTTACACCCCCTTAAAGAGTATTTGAGA-
643 TATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGAT
* * * * *
19031399 TTTACAGATTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTGAAATGCTTA
708 TTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCA
* * *
19031464 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATACCAAAAAAAATACAAGGA
773 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA
* * * * *
19031529 TCATGTCTAGCAAGTTTGGGGCTAAAACTCCTTTCAAAAAAATTTAAAAAAAATCCCGAACCG
838 TCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTT-TAAAAAATCCCGAACCG
* * * *
19031592 TAAAAAGTTTTAAAAATCGTGAAAAATTGAAAACGAGTCGTCTTGCCATGAAACTTAACGTGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
*
19031657 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* *
19031722 ATGTGCCTAAACCCACCTACCACCCTATCGATCCA-TAGCTTGTGCATCCCGTCTCTCTGGCCGG
131 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGA-CTTGCGCATCCCGTCTCTCTGGCCGG
* * * * *
19031786 CGTAGTGCCCGCCCACCCGCCCACTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTA
195 CGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
** * * * *
19031851 GTCTAAGATCGAACCAGATTGAGGGTTGCGGCAGCAGGATCAGCACCACGTAGAGGGGGACCCGG
260 GTCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGGACCCGA
** * *
19031916 TTGATCCCCAGCTT-CTGCATCCCGCCCCTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGG
325 CCGATCCCCAGCTTGC-GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* * *
19031980 GTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCACTCCCAGTCTAAGAT
389 GTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* * **
19032045 CAGACCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAGGTGCTGGTGCCGTATTTTTC
454 CAGACCGAACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTC
* ** * *
19032110 TTCACCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGACAGACGGCATTGAGGTTCCGGCG
519 TTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCG
* *
19032175 ATCGGGGGGCCGAGGGGGTGCGCGAACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
584 ATCGGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
* * * *
19032240 -GCCCCCTATCCCTCATCAAACCTCCAGAACTCAAACCACCTTAAAGATCATTTGAGATTTTACA
649 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
*
19032304 GGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
714 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
*
19032369 CTTGTACACTTCGAGATTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGT
779 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGT
* * * * * *
19032434 CTACCAGGTTTAGGGCCAAACCTCCTTTTGAAAAAATTTTAAAAAATCCCAAACCA
844 CTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
* *
19032490 CAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGCGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
** *
19032555 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGATG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * *
19032620 ATGTGCCTAAA-CCACCT-TCACCCTATCGATCCACGACTTACGCATCCCGTCTCTCTAGCCGGC
131 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* * * * *
19032683 GTGGCGCCCGTCTGCCCACCCGCCCGCTCGTTTCATCGATGGGCTTAGGCATACGGAGTTCATTC
196 GTAGTG-CC--C-GCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * ** *
19032748 CCAGTCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCAGGATTGGTAGCACGCAGAAGGGGACC
257 CCAGTCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGGACC
* * * * * * *
19032813 CGATCGAT-CCCTGACTTACGCATCCCACCCCTCTGGCCGACTGAGCGCCCACACGCTCGTTCCG
322 CGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
* * * * * *
19032877 TGGGATGACTTAGACATACAGAGTTCATTCCCATTCTAAGCATGA-GAAATTCTTTCCCAGTAC-
386 TGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCAT-ACGGAGTTCATTCCCAGT-CT
* * *
19032940 AAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCTACAT
449 AAGATCAGACCGAACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACAT
* * * *
19033005 TTTTCTTCGCTGGGGCA-C--CGTC---G---C-T-GGAGAACCTGACCGACGGCATTAGGGTTC
514 TTTTCTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTC
* *
19033059 CGGCGATCGGGGGGGCCG-GGGGGCTGTGCGCACATGATGTGCTATGGGTGCTGGTCCTTGGCCC
579 CGGCGATC-GGGGGGCCGAGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* *
19033123 TTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAACCCCTTAAAGAGCATTTGAGA
642 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
* * *
19033188 TTTTAAAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGAGGACACTTTTTTCAAATGATC
707 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
* *
19033253 ACAAAATCTTGTACACTTCAAATTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGG
772 ACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGG
* * * * *
19033318 ATCACGTCTACGAAGTTTGGGGCAAAAAATCCATTCGAAAAAATGTTAAAAAATCCCGAACCG
837 ATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
* * * * *
19033381 CAAAGAGTTTCAAAAATTATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCATGTGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * * *
19033446 GCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGTATTTGCATGCAGAAATATGAAG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* *
19033511 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT-ACTCGG
131 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGC-CGG
* * * * **
19033575 CGTAGTACCAGCCCGCCCGCCCGTTCATTTGGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
195 CGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * * * * * * *
19033640 GTCTATGATCGGACCGGACCGAGTGTTACGGCAGAAAGATCGGCAGCACGCAGAGGGGGACCC-A
260 GTCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGGACCCGA
* * * * *
19033704 GCCGATCCCCAGCTTGAGCGTCCCACCCCTTTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGG
325 -CCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* *
19033769 GTTGACTTAGGCATACAGAGTTCATTCCCCGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT
389 GTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * * * * *
19033834 CAGA-CTAGACCGAGGCTTGCAGTAGCACATTCTAGGCTCGAGCATGTGTTGGTGCCACATTTTT
454 CAGACCGA-ACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTT
* * * * *
19033898 CTTCACCGGGGCACAATCGCCGGAGCATCGTCAGAGAACCTGATCGACGGCATTGGGGTTCTGAC
518 CTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGC
* *
19033963 GATCGGGGGGTC-AGGGGGTGTGCGCACAGGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
583 GATCGGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
* *
19034027 TGGCCCCATATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
648 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* *
19034092 AAGTTTGCTGCCAGTAGCCATTAAAGTGTCAGAAATGGGG-CACTTTTTTCAAATGGTCACAAAA
713 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * *
19034156 TCTTGTACACTTTGAGCTTTTAGCTGAA-TTTTTTCTGCAAGCCAACAAAAATACAAGGATCACG
778 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACG
* *
19034220 TCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAACAAATCTCGAACCG
843 TCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
* **
19034277 TAAAAATTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * * *
19034342 GCTTAAGGGACCACTGTATGAATTTACAAGCCATAAAAATGGTAATGGCACGCAGAGATATGAAG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * * ** * * *
19034407 ATCTGCCTAAACCCACCTACGACCCTATCGATCCACGGCTTGCGCATTTCATCTCTCTGGTCGAC
131 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* * * * *
19034472 GGAGTGCCCGTCCGCCTACCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTGATTC
196 GTAGTGCCCG--C-CC-GCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTC
* * ** * * * * *
19034537 CCAGTCTAAGATCCAATCAGACTAAGGGTTGCGGTAGTAGGATCAATAGCACGTAGAGGGAGACC
257 CCAGTCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGGACC
** * * * *
19034602 CGGTCGATCCCCGGCTTGCGCATTCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTTGTTTCGT
322 CGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGT
* *
19034667 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTTCCAGTCTAAG
387 GGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * * *
19034732 ATCAGATC-AGATCAAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATATGCTGGTGCCGCATTT
452 ATCAGACCGA-ACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTT
** * * * * *
19034796 TTCTTCGTCGAGGCACCATTGTCGGAGCATCGTCGGAGAACCTAACCGACGGCATTGCGGTTCCG
516 TTCTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCG
* * *
19034861 ACGTTCGGGGGGGCC-AGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCGTTA
581 GCGATC-GGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* *
19034925 TATTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTAAAAGAGCATTTGGGATTT
645 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* *
19034989 TATAGGTTTGCTCCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
710 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* * *
19035054 AAATCTTGTACACTTTGAGTTTTTAGCTTAATGTTTTTGTGCATGCCAACAAAAATACAAGGATC
775 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * *
19035119 ACCTCTACCAAGTTTGGGGCGAAAACTCC-TTCCAAAAAAATTAAAAAAATCCCGAACCG
840 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
** * * * * * * *
19035178 TAAAAAGTTTTGAAAGTCGTGAAAAATAAAAAACAACTCGTCTTGTCATGAAACTT-AGTGTGAA
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA-CGTGAA
* * *
19035242 CGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACTCAGAAATATGAT
65 GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAA
* * *
19035307 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGTGCATCCCGTCTCTTTGGTCGG
130 GATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGG
* * * *
19035372 CGTAGTGCTCGACCGCCCGTCTGCTCGCAT-GTTTCGTCGGTTGGATTAGGCATAC-GA-TTGCA
195 CGTAGTGCCCGCCCGCCCG-C--C-CGC-TCGTTTCATCGGTTGGCTTAGGCATACGGAGTT-CA
* * * * * * * *
19035434 TTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGTGGCAGCAAGATCGGTAGCATGCAGAGGCGG
254 TTCCCAGTCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGG
* * * * * *
19035499 ACCCGACCGATCTCCAGCTTGTGCATCCCGCCCCTCTGGTCGACTGATCGCCCGCACGCTCATTT
319 ACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTT
* * *
19035564 CGTGGGTTGACTTAGGCATACAAAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCATTCT
384 CGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCT
* * * * ** *
19035629 AAGATCGGA-CAAGACCGATGGTTGCGACAGCACATGCT-GGACTCGAACATGTGCTGGTGCCGC
449 AAGATCAGACCGA-ACCGAGGGTTGCGGCAGCACATGCTAGG-CTCGGGCATGTGCTGGTGCCAC
*** * * *
19035692 ATTTTTCTTTGTCGGGGCACCAT-GTCGGAGCATCGTCGAAGAACCTGACCGACGACATTGGGGT
512 ATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGT
* * * *
19035756 TTCGGTGAT--------CG-GGGGGTGTGCACACATGATGCGCGATGGGTGCTGGTACTTGGCCC
577 TCCGGCGATCGGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* *
19035812 TTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCTTTAAAGAGCATTTGAGA
642 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
* * *
19035877 TTTTACGGGTTTACTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
707 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
19035942 ACAAAATCTTGTACACTTCGA-TTTTATAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAG
772 ACAAAATCTTGTACACTTCGAGTTTT-TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAG
* * *
19036006 GATCACGTCTACCAAGTTTGGGACCAAAACTCCTTTCGAAAAAATTTTACAAAATCTCGAACCG
836 GATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
* * *
19036070 CAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGACTTGCCATGAAACTTCACGTGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * *
19036135 GCTTGAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * * *
19036200 ACGTGCCTAAACTCACCTACCACCCTATCGATCCACGACTT--G-----CGTATCTCTGGCAGGC
131 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
* * *
19036258 GTAGTACCTGGCCGCCCGCCCGCTCGATCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATTC
196 GTAGTGCCCGCCCGCCCGCCCGCTCG----TTTCATCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * * * * * * * * * *
19036323 CCAGTCTAAAATC-AGATCGGATCGAGGGTTGTGACAGCAAGATC-GACAGCTCCCAAAGGGCGA
257 CCAGTCTAAGATCGA-ACCAGACCGAGGGTTGCGGCAGCAGGATCAG-TAGCACGCAGAGGGGGA
* * * * * * * ** *
19036386 CCCGACTGATCCTCGGCTTGCACATCCCGCCCCTCTGGTCGGCTGAGCACCCGCATGCTCCCTCC
320 CCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTC
* * *
19036451 GTGGGTTGACTTAGGCATATAGAGTTCATTCCCAATCTAAGCATACGGAGTTGATTCCCAGTCTA
385 GTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTA
** * * * * * * * *
19036516 AGATTGGACCGGACCTAGGGTTGCAGCAGGAAATGCTAGGCTCGGACATGTGTTGGTGCCGCATT
450 AGATCAGACCGAACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATT
* ** * * * * *
19036581 TTTCTTCATCGGGGCACCATCGTTGGAGTATCATCAGAGAACCTGACCGGCGGCATTGGGGTTCT
515 TTTCTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCC
* * *
19036646 AGCGATCGGGCGGGCCGAGGGGGGTGTGCGCACAGGATGTGCGATGGGTGCTGGTACTTGGCCCA
580 GGCGATCGGG-GGGCCGA-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
* *
19036711 TATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCGCACCCCCTTAAAGAGCATTTGAGAT
643 TATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGAT
* * *
19036776 TTGACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTCCAAATGGT-A
708 TTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCA
* * * * * **
19036840 CAAAATCTTGTACACTTCAAGCTTTTAGTTGAATTTTTTTGTGCATACAAACAAAAATATGAGGA
773 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA
* * *
19036905 TCACGTCTACCAAGTTTGGGGCCAAAACTGCTTTCGAAAAAATTTTAAAACATCTCGAACCG
838 TCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
** * * *
19036967 TAAAAAGTTTCAAAAATTGTGAAAAATAGAAAACAAGTCGTCTTGCTATGAAACTTCACCTGAAG
1 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
*
19037032 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAG
66 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * * *
19037097 ATGAGCCTAAACCCACCTACCATCCC-GTCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGC
131 ATGTGCCTAAACCCACCTACCA-CCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGG
* * *
19037161 CGTAGT--------GCCCGCCCGCTTGTTTCATCGGTTGGCTTAGGCATACAGAATTCATTCCCA
195 CGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * *
19037218 ATCTAAGATC-AGACCAGACCGAGGGTTGCGGCAGCAGGATC-GATAGCACGCGGAGGGGGACCT
260 GTCTAAGATCGA-ACCAGACCGAGGGTTGCGGCAGCAGGATCAG-TAGCACGCAGAGGGGGACCC
* * *
19037281 GATCGATCCCTAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATG
323 GACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTG
* * * *
19037346 GGTTGACTTAGGCATAC-GAAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAATGTAAG
388 GGTTGACTTAGGCATACAG-AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
* * * * *
19037410 ATCGGACAGGACCGAGGGTTGCAGCAGCACATGCTAGACTCGGGCATGTGCTGGTGCCACATTTT
452 ATCAGACCGAACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTT
** * * *
19037475 TCTTCGTCGGGGCACCAT---C---G---C--CGGAGAACCTGACCGGCGGTATTGGGGTTCGGG
517 TCTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGG
** * * *
19037529 CGATCGAGAAGGCCGAGGGGGTGAGCGCACATGATGTGTGATGGGCGCTGGTACTTGGCCCTTAT
582 CGATCG-GGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
*
19037594 ATTGG-CCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
646 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* * *
19037658 ACAGGTTTGTTGACAGTAGCAATTAAAGT
711 ACAGGTTTGCTGCCAGTAGCCATTAAAGT
19037687 ATCTAAAAGT
Statistics
Matches: 5300, Mismatches: 686, Indels: 230
0.85 0.11 0.04
Matches are distributed among these distances:
879 82 0.02
880 50 0.01
881 45 0.01
882 2 0.00
883 1 0.00
884 1 0.00
885 49 0.01
886 233 0.04
887 106 0.02
888 7 0.00
889 310 0.06
890 114 0.02
891 743 0.14
892 453 0.09
893 45 0.01
894 1 0.00
895 3 0.00
896 323 0.06
897 326 0.06
898 509 0.10
899 521 0.10
900 959 0.18
901 341 0.06
902 58 0.01
904 18 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGC
GTAGTGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
TCTAAGATCGAACCAGACCGAGGGTTGCGGCAGCAGGATCAGTAGCACGCAGAGGGGGACCCGAC
CGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
TGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCA
GACCGAACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTT
CACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGAT
CGGGGGGCCGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
ACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
Found at i:19033816 original size:26 final size:26
Alignment explanation
Indices: 19033779--19033831 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
19033769 GTTGACTTAG
*
19033779 GCATACAGAGTTCATTCCCCGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
19033805 GCATAC-GAAGTTCATTCCCAGTCTAA
1 GCATACAG-AGTTCATTCCCAGTCTAA
19033831 G
1 G
19033832 ATCAGACTAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.28, C:0.28, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:19034708 original size:26 final size:26
Alignment explanation
Indices: 19034679--19034731 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19034669 GTTGACTTAG
19034679 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19034705 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19034731 G
1 G
19034732 ATCAGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19036494 original size:26 final size:26
Alignment explanation
Indices: 19036465--19036517 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
19036455 GTTGACTTAG
*
19036465 GCATATAGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
* * *
19036491 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
19036517 G
1 G
19036518 ATTGGACCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:19037387 original size:26 final size:26
Alignment explanation
Indices: 19037357--19037409 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19037347 GTTGACTTAG
19037357 GCATACGAAGTTCATTCCCAATCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
*
19037383 GCATACGAAGTTCATTCCCAATGTAA
1 GCATACGAAGTTCATTCCCAATCTAA
19037409 G
1 G
19037410 ATCGGACAGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.34, C:0.25, G:0.15, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAATCTAA
Found at i:19039006 original size:26 final size:26
Alignment explanation
Indices: 19038970--19039022 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19038960 GTTGACTTAG
19038970 GCATACGGAGTACATTCCCAGTCTAA
1 GCATACGGAGTACATTCCCAGTCTAA
* * *
19038996 GCATACGGAGTTCATTGCCAGTGTAA
1 GCATACGGAGTACATTCCCAGTCTAA
19039022 G
1 G
19039023 ATTGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTACATTCCCAGTCTAA
Found at i:19039903 original size:26 final size:26
Alignment explanation
Indices: 19039866--19039918 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
19039856 GTTGACTTAG
* *
19039866 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGCCTAA
*
19039892 GCATACGAAGTTCATTGCCAGCCTAA
1 GCATACGAAGTTCATTCCCAGCCTAA
19039918 G
1 G
19039919 TTCGGATTGA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.26, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGCCTAA
Found at i:19040375 original size:895 final size:888
Alignment explanation
Indices: 19037691--19044142 Score: 7146
Period size: 895 Copynumber: 7.2 Consensus size: 888
19037681 TAAAGTATCT
*
19037691 AAAAGTTTCGAAAATCATGAAAAATA-AAAACGA-TCGTCTTG-CATG-AACTTCACGTGAAGGC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
* * * *
19037752 TTAAGGGA-CAATGTATG-ATTTACAAGCCATAAAAATGCCATTGGCACGTAGAAATATGAAGAT
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
* * *
19037815 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCGTCTTTGGCCGGCA
131 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC-TCTCTGGCCGACG
* * ** * *
19037880 TAGTGCCCGCGCCCGCTCGCCCCGCCCGCTTGGTTTCATTAGTTAGCTTTAGGCATAC-AAATTC
195 TAGT------GCCCGCT-----CGCCCGC-TCGTTTCGTCGGTTGGC-TTAGGCATACGAAGTTC
* * * * * *
19037944 ATTACCAAAATCTATAGATCAAGACCAGACGGAGTGTTA---CA--A-CA--GCA-C-CGCAGAG
247 ATT-CC-CAGTCTA-AGATC-AGACCAGACTGAGGGTTACGGCAGCAGGATCGCAGCACGTAGAG
* * * * * *
19037999 GGGGACCTGACCGATCCTCGGCTTGCCCATCCCGCACCTCTGGTCGGCTAAGCGCCTGCACGCTC
308 GGGGACCCGACCGATCC-CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTC
**
19038064 GTTTCGTGGGTTGACTTAGAAATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCA
372 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCA
* * * * *
19038129 G-CGTAAGATCAGACC-AGACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGTTGGTG
437 GTC-TAAGTTCGGACCGA-ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGTGCTGGTG
** *
19038192 CC--ACATTT-TTC-T----A-C-GCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGT
500 CCGTATTTTTCTTCGTCGGCACCATCCGGAGCATCGTC-GAGAACCTGACCGGCGGCATTGGGG-
* *
19038247 TTC-AGCGATCAGGGG-GGTC-GGGGGGGTGTGCGCACATGATGTCCGATGGGTGCTGGAACTTG
563 TTCGA-CGATC-GGGGCGG-CGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
*
19038309 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCCTTT
625 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
*
19038374 GAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
690 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
*
19038439 GGTCACAAAATCTTGTACACTTTGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
755 GGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC
* * * * **
19038504 AAGGATCACGTCTAGCAAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAAATCCCAAA
820 AAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTT-AAAAAATCCTGAA
**
19038569 CCATA
884 CCGCA
* * * * *
19038574 AAAAGTTTCAAAAATCGTGAAAAATTGAAAATGAGTTGTCTTGCCATGAAACTTAACGTGAAGGC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
*
19038639 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGAT
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
* * * *
19038704 GTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTTTGGCCGGCAT
131 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGT
* * *
19038769 AGTGCCCGCCCGCCCGACCACTCGTTTCGTCAGTTGGCTTAGGCATACGAAGTTCATTCCTAGTC
196 AGTGCCCGCTCGCCCG----CTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTC
* * * * * * * *
19038834 TAAGATCAAATCAGATTGAGGGTTACGGCAGCAGGATCAGCACCACATAGAGGGAGACCTGGCCG
257 TAAGATCAGACCAGACTGAGGGTTACGGCAGCAGGATC-GCAGCACGTAGAGGGGGACCCGACCG
* *
19038899 ATCCCCGGCTTGCGCATCCCGCCCCTCTAGCCGGCTGAGCGCCTGCACGCTCGTTTCGTGGGTTG
321 AT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
* * * *
19038964 ACTTAGGCATACGGAGTACATTCCCAGTCTAAGCATACGGAGTTCATTGCCAGTGTAAGATT-GG
385 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAG-TTCGG
* * * * *
19039028 ACCGGACTGAAGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
449 ACCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGTGCTGGTGCCGTATTTTTCTTC
* * * *
19039093 ATCGAGGCACCATCGTCGAAGCATCGCCGGAGAACCTGACCGGCGGCACTGGGGTTTCGACGATC
514 GTC--GGCACCATC--CGGAGCATCGTC-GAGAACCTGACCGGCGGCATTGGGG-TTCGACGATC
* * * *
19039158 GGGGGGGCCGGGTGGGGTGTGCGCACATGATGTGCGATGAGTGCTGGAACTTGGCCCTTATATTG
573 GGGGCGG-CGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* * * * * *
19039223 GCCCCCTATCCCTTATCAAACCTCAAGAACTCACATCCCCTTAAAAAGCCTTTGGGATTTTACAG
637 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* *
19039288 GTTTGCTGCCAGTAGCCAATAAAGTGTCTGAAATGGGGACACATTTTTCAAATGGTCACAAAATC
702 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
* *
19039353 TTGTACACTTTGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAA-AAAATATAAAAGGATCATGT
767 TTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA-ATACAAGGATCATGT
* * * * * *
19039417 CCACTAAGTTTGGGGCCAAAAGTCCTTCCAAAAAAATTTTCAAAAAT-CTCGAACCGTA
831 CTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGCA
* * *
19039475 AAAAGTTTCCAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGAC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
* * *
19039540 TTAAGGGACCATTGTATGAATTTACAAGCTATAAAAATGGCATTGGAATGCAGAATTATGAAGAT
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
* *
19039605 GTGCCTAAATCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT
131 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGT
*
19039670 AGTGCCCG-TCGACCCGCTCGTTTCGTCGGTTGG-TTAGGCATACGGAGTTCATTCCCAGTCTAA
196 AGTGCCCGCTCG-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAA
* *
19039733 GATCGGACCAGACCGAGGGTTACGGCAGCAGGATCAGCAGCACGTAGAGGGGGACCCGACCGATC
260 GATCAGACCAGACTGAGGGTTACGGCAGCAGGATC-GCAGCACGTAGAGGGGGACCCGACCGATC
* * * ** *
19039798 TCCGGCTTGCACGTCCCACCCCTCTGGCCAACTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACT
324 -CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
* * **
19039863 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTGCCAGCCTAAGTTCGGATTG
388 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGTTCGGACCG
*
19039928 AACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGTGCTGGGGCCGTATTTTTCTTCGTCA
453 AACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGTGCTGGTGCCGTATTTTTCTTCGTC-
*
19039993 GGCCACCATCACTGGAGCATCGTCGATGAACCTGACCGGCGACATTGGGGTTCGACGATCGGGGC
517 GG-CACCATC-C-GGAGCATCGTCGA-GAACCTGACCGGCGGCATTGGGGTTCGACGATCGGGGC
*
19040058 GGCGGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGTCCCTTATATTGGCCCC
578 GGC-GGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
19040123 CTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTCG
642 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* * *
19040188 CTGCCAGTAGCCGTTAAAGTGTTTGAAATGGGAACACTTTTTTCAAATGGTCACAAAATCTTGTA
707 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * *
19040253 CACATTGAGTTTATAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCGTGTCTACCA
772 CACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCA
* * *
19040318 AGCTTAGGACCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGCA
837 AGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGCA
* * *
19040370 AAAAGTTTTAAAAATCATGAAAAATAAAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
* * * ** ***
19040435 CTAACGGACAATTGTATGAATTTTGAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGAT
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
* *
19040500 GTGCCTAAACCCACCTACCACCCTATCGATCCACGTCTTGCGCATCCCATCTCTCTGGCCGACGT
131 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGT
* * * * * * * * *
19040565 TGTGCCCACCCGCCCACCCG-TACGCCCGCCCGCTCGCCCGC-TAGGCACACGAAGTTCATTCCC
196 AGTGCCCGCTCGCCCGCTCGTTTCG-TCG---G-TTG---GCTTAGGCATACGAAGTTCATTCCC
* ** * * * *
19040628 AGTCTAAGAT-TGAACTGGACTGAGGGTTGCGGTAACAGGATCGATAGCACGTAGAGGGGGACCC
253 AGTCTAAGATCAG-ACCAGACTGAGGGTTACGGCAGCAGGATCG-CAGCACGTAGAGGGGGACCC
* * * * *
19040692 AACCGATCCTCAGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCATA
316 GACCGATCC-CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTG
* *
19040757 GGTTGACTTAGGCATATGGAGTTCATTCCCAATCTAAGCATAC-AGAGTTCATTCCCAGTCTAAG
380 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGA-AGTTCATTCCCAGTCTAAG
* * * * *
19040821 ATCGGACCGGACCGAAGGTTGCGACAGCACATGCTGGGCTC-AAGCATGTGCTGGTGCCGTATTT
444 TTCGGACCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGA-CATGTGCTGGTGCCGTATTT
* * * *
19040885 TTC-T--T------CA-CC-GAGGCACCGTCGGAGAACCTGACCGACGGTATTGGGCTTTCGACG
508 TTCTTCGTCGGCACCATCCGGA-GCATCGTC-GAGAACCTGACCGGCGGCATTGGG-GTTCGACG
* * * *
19040939 ATCGGGGGGGCCGGGTGGGGTGTGCGCACATGATGTGCAATGCGTGCTGGTACTTGGCCCTTATA
570 ATCGGGGCGG-CGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
19041004 TTGG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCATAAAGAGCATTTGAGATTTTA
634 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* *
19041068 CAGGTTTGTTGCCAGTGGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
699 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * *
19041133 ATCTTCTACA-TTTCGAGTTTTTAGATGAATTTTTTTGTGCTTGCCAACAAAAATACAAGGATTA
764 ATCTTGTACACTTT-GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * * * * *
19041197 CGGCTGCCAAGTTTGTGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATTCCCTGAA-CGCTTA
828 TGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAA-T-CCTGAACCGC--A
* *
19041261 AAAAGTTT-GAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG-CACTGAAACTTCACAGTGAAG
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA-TGAAACTTCAC-GTGAAG
* *
19041324 GCTTAA-GG-CCATTGGTATGAATTTACCAAGCGATAAAAAAAGGC-TTGGCAT-CAGAAATATG
64 GCTTAAGGGACCATT-GTATGAATTTA-CAAGCCAT-AAAAATGGCATTGGCATGCAGAAATATG
*
19041385 AAGATGTG-CT-AACCCACCTACCACCCTATCGATCGCACGTCTTGCGCAT-CC-TCTCTCTGG-
126 AAGATGTGCCTAAACCCACCTACCACCCTATCGATC-CACGGCTTGCGCATCCCGTCTCTCTGGC
* ** *
19041445 CGGCGTTA-T-CCCG-T--TTCG-TC-TTT--T---ATGGCTTAGGCATACG-A-TTCATTCCCA
190 CGACG-TAGTGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCA
*** * *
19041496 -TCT-AGATCA-AATTGAACTGA-GGTT--TGCAAGTAGGATCGCAAGCACGTAGAGGGGGA---
254 GTCTAAGATCAGACCAG-ACTGAGGGTTACGGC-AGCAGGATCGC-AGCACGTAGAGGGGGACCC
* * * ** * * **
19041552 GAACGAGCCATGGC-TGCATACTCTCG-CCCTCTGGCCGACTGAATG-CCGC-CGCGTCGTTTCG
316 GACCGATCC-CGGCTTGCGCA-TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC-TCGTTTCG
* * *
19041613 T-GGTTGACTTAGG-ATACGGA-ATCATT-CCATGTCATCAAGCATACGGAGTTCATTCCCACAT
378 TGGGTTGACTTAGGCATACGGAGTTCATTCCCA-GTC-T-AAGCATACGAAGTTCATTCCCA-GT
* * ** * * *
19041674 TTCAGTTCGGATTG-ACCGAAGGTTGCGACCAGCAACATGCCTGGGCTCGAACATGTGCTGGTGC
439 CTAAGTTCGGACCGAACCGAGGGTTGCG-GCAGC-ACATG-CTGGGCTCGGACATGTGCTGGTGC
* * *
19041738 CTTATTTTTCTTCGGTCCGGCCACCATCATCCGGAGCATCGTCCGGTGAAACCTGACCGGCGACA
501 CGTATTTTTCTTC-GT-CGG-CA-C--CATCCGGAGCATCGT-C-GAG-AACCTGACCGGCGGCA
*
19041803 TTGGGGTTCGACGATCAGGGGCAGCGGGGGGGCGGGGCGGTGTGCGCACATGCATGTGCGATGGG
557 TTGGGGTTCGACGATC--GGG--GC--GGCGG-GGGG-GGTGTGCGCACATG-ATGTGCGATGGG
* * *
19041868 TTGCTGGTACTTGTCGCTCTTATATTGGCCCCCCTATCCCTCATCAAACCTTGAGTAACTCACAA
613 -TGCTGGTACTTG--GCCCTTATATTGG-CCCCCTATCCCTCATCAAACCTCGAG-AACTCACAC
* * * *
19041933 CCCCTTAAAGAGGCA-TTGAAGATTTAACAGGTTCGCTGCCAGTAGCCGTTTAAAGTGTTTGAAA
673 CCCCTTAAAGA-GCATTTG-AGATTTTACAGGTTTGCTGCCAGTAGCC-ATTAAAGTGTCTGAAA
* *
19041997 TGGGGACAC-TTTTTCAAATGGTCACAAAAATCTTGTACACCTTGAGTTTATAGCTGAATTTATT
735 TGGGGACACTTTTTTCAAATGGTCAC-AAAATCTTGTACACTTTGAGTTTTTAGCTGAATTT-TT
*
19042061 TTGTGGCATGCCAACAAAAATACAAGGATCATGTCTACCAAAGCTTAT-GGACC-AAAATCCCTT
798 TTGT-GCATGCCAACAAAAATACAAGGATCATGTCTACC-AAG-TT-TGGGGCCAAAAAT-CCTT
* *
19042124 CCGAAAAAATTTAAAAAAAATCCCGAACCCGCA
858 CCGAAAAAATTT-TAAAAAATCCTGAA-CCGCA
*
19042157 AAAAGTTT-GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
* * * * * *
19042221 TTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAAAGGAATTGGCACGTAGAAATAGGAAGAT
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
** **** * ** * * *
19042286 GTGCCTAAACCCACCTAAAAAAGGAATTGATCCGTGGCTTGTGCATCCCATCTCTCTGGTCGACG
131 GTGCCTAAACCCACCT-ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACG
* * *
19042351 TAGTGCCCGCCTACCCGCCCACCCACCCGCTCATTTCGTCGGTTGGCTTAGGCGTAC-AGAGTTT
195 TAGTGCCCG-CT---CG--------CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGA-AGTTC
* * ** ** * *
19042415 ATTCCCAGTCTAAGATCAGACCAGACCGAGTGTTACGATAGCAGGATCGGCAGCACACAGACGGT
247 ATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTACGGCAGCAGGATC-GCAGCACGTAGAGGGG
** * * * * * *
19042480 GACCCGGTCGATCCCTAGCTTGGGCATCTCGCCCTTCTGGCCGACTGAGCGCCTGCACGCTCGTT
311 GACCCGACCGATCCC-GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTT
* * *
19042545 TCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTGCCAGTC
375 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTC
*
19042610 TAAGATT-GGACC-AGACCGAGGGTTACGGCAGCACATGCTGGGCTC-GAGCATGTGCTGGTGCC
440 TAAG-TTCGGACCGA-ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGA-CATGTGCTGGTGCC
*
19042672 GTATTTTTCTTCGTCGGGGCACCAT-C---G--TCG--GAGAACCTGACCGACGGCATTGGGGTT
502 GTATTTTTCTTCGTC--GGCACCATCCGGAGCATCGTCGAGAACCTGACCGGCGGCATTGGGG-T
* * * * *
19042729 TCGACGATCGGGGGGGCCGGGGGGGTGTGTGAACATGATGTGCGATGGGTGCTGGTGCTTGGCCC
564 TCGACGATCGGGGCGGCGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* *
19042794 TTATATTGGCCCCCTATCGCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGACCATTTGAGA
629 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
*
19042859 TTTTACAGGGTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
694 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTC
* * *
19042924 ACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGGGCATGCCAACAAAAATAC-AGG
759 ACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGG
* * * *
19042988 ATCATGTCTACCAAATTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAT-CTCGAACCGT
824 ATCATGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGC
19043052 A
888 A
* *
19043053 AAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAGGAAACTTCACGTGAAGGC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
19043118 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA-AAATATGAAGAT
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
* * * *
19043182 GTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCACATCCCATCTCTTTGGCCGACGT
131 GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGT
19043247 AGTGCCCGCTTGCCCGCCCGCACACTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCC
196 AGTGCCCGC-T---CGCCCG----CTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCC
* * ** * * * *
19043312 AGTCTAAGATCTGACCAAACTGAGGGTTTTGGTAGTAGGATCGACAGCATGCAGAGGGGGACCCG
253 AGTCTAAGATCAGACCAGACTGAGGGTTACGGCAGCAGGATCG-CAGCACGTAGAGGGGGACCCG
* * * *
19043377 ATCGATCCCCGGCTTGCTCTTCCCGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGG
317 ACCGAT-CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
*
19043442 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGAT
381 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGTT
* * * * * *
19043507 CAGACCGGATCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTAGTGCCATATTTTTC
446 CGGACCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGTGCTGGTGCCGTATTTTTC
* * * * *
19043572 TTTGCTGGGGCACCAT-C---G--TCG--GAGACCCTGACCGGCGGCGTTGAGGTTCCGACGAT-
511 TTCG-T-CGGCACCATCCGGAGCATCGTCGAGAACCTGACCGGCGGCATTGGGGTT-CGACGATC
* *
19043628 ----CGGC--GGGGGGTGTGCGCACATGGTGTACGATGGGTGCTGGTACTTGGCCCTTATATTGG
573 GGGGCGGCGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
* *
19043687 CCCCCTATCCCTCATCAAACTTCGAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
638 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* *
19043752 TTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTTGAAATGGTCACAAAATC
703 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAATGGTCACAAAATC
* * * * *
19043817 TTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCTTGCCAACAAAAATACAAGAATCACGTC
767 TTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTC
* * * * * *
19043882 TACCAAGTTTGTGGACAAAACTCCTTTCGAAAAAATTTTCAAAAATCC-CAACTCGCA
832 TACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTGAAC-CGCA
* * *
19043939 AAATGTTTCAAAAATCATGAAAAATAGAAAACGATTCGTCTTGCCATGAAACTTCACGTGAATGC
1 AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
* * *
19044004 TTAACGGACCATTGTATGAATTTACAAGCCATAAAAAT-GAATTTGGCATGCAAAAATATGAAGA
66 TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA-TTGGCATGCAGAAATATGAAGA
* * * *
19044068 TGTGCCTGAACACAGCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGACG
130 TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACG
19044133 TAGTGCCCGC
195 TAGTGCCCGC
19044143 CCGCTCGCCC
Statistics
Matches: 4777, Mismatches: 552, Indels: 476
0.82 0.10 0.08
Matches are distributed among these distances:
854 3 0.00
855 7 0.00
856 7 0.00
857 48 0.01
858 26 0.01
859 24 0.01
860 42 0.01
861 3 0.00
862 1 0.00
863 24 0.01
864 8 0.00
865 9 0.00
866 3 0.00
867 10 0.00
868 3 0.00
869 9 0.00
871 1 0.00
875 2 0.00
876 21 0.00
877 27 0.01
878 23 0.00
879 17 0.00
880 21 0.00
881 5 0.00
882 10 0.00
883 28 0.01
884 170 0.04
885 101 0.02
886 184 0.04
887 293 0.06
888 303 0.06
889 194 0.04
890 109 0.02
891 352 0.07
892 57 0.01
893 51 0.01
894 21 0.00
895 584 0.12
896 429 0.09
897 158 0.03
898 52 0.01
899 20 0.00
900 33 0.01
901 283 0.06
902 519 0.11
903 54 0.01
904 44 0.01
905 22 0.00
906 24 0.01
907 12 0.00
909 11 0.00
910 12 0.00
911 12 0.00
912 4 0.00
913 3 0.00
915 1 0.00
917 5 0.00
918 22 0.00
919 15 0.00
921 1 0.00
923 3 0.00
924 13 0.00
925 2 0.00
926 9 0.00
927 3 0.00
928 11 0.00
929 8 0.00
930 20 0.00
931 4 0.00
932 5 0.00
933 48 0.01
934 24 0.01
935 23 0.00
936 48 0.01
937 8 0.00
938 8 0.00
939 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (888 bp):
AAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGC
TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGAT
GTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGT
AGTGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAG
ATCAGACCAGACTGAGGGTTACGGCAGCAGGATCGCAGCACGTAGAGGGGGACCCGACCGATCCC
GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
GCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGTTCGGACCGAAC
CGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGTGCTGGTGCCGTATTTTTCTTCGTCGGCA
CCATCCGGAGCATCGTCGAGAACCTGACCGGCGGCATTGGGGTTCGACGATCGGGGCGGCGGGGG
GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAG
TTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGG
CCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGCA
Found at i:19042597 original size:26 final size:26
Alignment explanation
Indices: 19042561--19042613 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19042551 GTTGACTTAG
19042561 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
19042587 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19042613 G
1 G
19042614 ATTGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19043462 original size:891 final size:890
Alignment explanation
Indices: 19041827--19044170 Score: 3194
Period size: 891 Copynumber: 2.6 Consensus size: 890
19041817 TCAGGGGCAG
* *
19041827 CGGGGGGGCGGGGCGGTGTGCGCACATGCATGTGCGATGGGTTGCTGGTACTTGTCGCTCTTATA
1 CGGGGGGGCGGGGGGGTGTGCGCACATG-ATGTGCGATGGG-TGCTGGTACTTG--GCCCTTATA
* *
19041892 TTGGCCCCCCTATCCCTCATCAAACCTTGAGTAACTCACAACCCCTTAAAGAGGCA-TTGAAGAT
62 TTGG-CCCCCTATCCCTCATCAAACCTCGAG-AACTCACACCCCCTTAAAGA-GCATTTG-AGAT
* * *
19041956 TTAACA-GGTTCGCTGCCAGTAGCCGTTTAAAGTGTTTGAAATGGGGACAC-TTTTTCAAATGGT
123 TTTACAGGGTT-GCTGCCAGTAGCC-ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGT
* *
19042019 CACAAAAATCTTGTACACCTT-GAGTTTATAGCTGAATTTATTTTGTGGCATGCCAACAAAAATA
186 CAC-AAAATCTTGTACA-CTTCGAGTTTTTAGCTAAATTT-TTTTG-GGCATGCCAACAAAAATA
* *
19042083 CAAGGATCATGTCTACCAAAGCTTAT-GGACCAAAA-TCCCTTCCGAAAAAATTTAAAAAAAATC
247 CAAGGATCATGTCTACCAAA--TT-TGGGGCCAAAACT-CCTTCCGAAAAAATTT-TAAAAAAT-
*
19042146 CCGAACCCGCAAAAAGTTT-GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
306 CCGAA-CCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * * *
19042210 CACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAAAGGAATTGGCACGTAGA
370 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGAATTGGCATGCA-A
* ** **** * ** *
19042275 AATAGGAAGATGTGCCTAAACCCACCTAAAAAAGGAATTGATCCGTGGCTTGTGCATCCCATCTC
434 AATATGAAGATGTGCCTAAACCCACCT-ACCACCCTATCGATCCACGGCTTGCGCATCCCATCTC
* * * *
19042340 TCTGGTCGACGTAGTGCCCGCCTACCCGCCCACCCACCCGCTCATTTCGTCGGTTGGCTTAGGCG
498 TCTGGTCGACGTAGTGCCCGCCTGCCCGCCCA--CA--CACTCGTTTCGTCGGTTGGCTTAGGCA
* * * *
19042405 TACAGAGTTTATTCCCAGTCTAAGATCAGACCAGACCGAGTGTTACGATAGCAGGATCGGCAGCA
559 TACAGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTACGATAGCAGGATCGACAGCA
* * * * * * *
19042470 CACAGACGGTGACCCGGTCGATCCCTAGCTTGGGCATCTCGCCCTTCTGGCCGACTGAGCGCCTG
624 CACAGACGGGGACCCGATCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCG
*
19042535 CACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
689 CACGCTCGTTTCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTC
* **
19042600 ATTGCCAGTCTAAGATTGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGAGCATGTGC
754 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGAGCATGTGC
* * *
19042665 TGGTGCCGTATTTTTCTTCG-TCGGGGCACCATCGTCGGAGAACCTGACCGACGGCATTGGGGTT
819 TAGTGCCATATTTTTCTTCGCT-GGGGCACCATCGTCGGAGAACCTGACCGACGGCATTGAGGTT
*
19042729 TCGACGAT
883 CCGACGAT
* * *
19042737 CGGGGGGGCCGGGGGGGTGTGTGAACATGATGTGCGATGGGTGCTGGTGCTTGGCCCTTATATTG
1 CGGGGGGG-CGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* *
19042802 GCCCCCTATCGCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGACCATTTGAGATTTTACAG
65 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
19042867 GGTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
130 GGTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
19042932 TTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGGGCATGCCAACAAAAATAC-AGGATCATGTC
195 TTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGGGCATGCCAACAAAAATACAAGGATCATGTC
* *
19042996 TACCAAATTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTT
260 TACCAAATTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGCAAAAAGTTT
* *
19043061 CAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAGGAAACTTCACGTGAAGGCTTAAGGGA
324 CAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
*
19043126 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAATATGAAGATGTGCCTAAA
389 CCATTGTATGAATTTACAAGCCATAAAAATGGAATTGGCATGCAAAATATGAAGATGTGCCTAAA
* * * *
19043191 CCCACCTACCACCCTATCGATCCACGACTTGCACATCCCATCTCTTTGGCCGACGTAGTGCCCGC
454 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGTCGACGTAGTGCCCGC
* *
19043256 TTGCCCGCCCGCACACTCGTTTCGTCGGTTGGCTTAGGCATAC-GAAGTTCATTCCCAGTCTAAG
519 CTGCCCGCCCACACACTCGTTTCGTCGGTTGGCTTAGGCATACAG-AGTTCATTCCCAGTCTAAG
* * ** * * ** *
19043320 ATCTGACCAAACTGAGGGTTTTGGTAGTAGGATCGACAGCATGCAGAGGGGGACCCGATCGATCC
583 ATCAGACCAAACCGAGGGTTACGATAGCAGGATCGACAGCACACAGACGGGGACCCGATCGATCC
* * * * * *
19043385 CCGGCTTGCTCTTCCCGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
648 CCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGAGTTGACTT
*
19043450 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCGG
713 AGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAG
* * * *
19043515 ATCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTAGTGCCATATTTTTCTTTGCTGG
778 ACCGAGGGTTACGGCAGCACATGCTGGGCTCGAGCATGTGCTAGTGCCATATTTTTCTTCGCTGG
* * *
19043580 GGCACCATCGTCGGAGACCCTGACCGGCGGCGTTGAGGTTCCGACGAT
843 GGCACCATCGTCGGAGAACCTGACCGACGGCATTGAGGTTCCGACGAT
* *
19043628 C-----GGC-GGGGGGTGTGCGCACATGGTGTACGATGGGTGCTGGTACTTGGCCCTTATATTGG
1 CGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
* *
19043687 CCCCCTATCCCTCATCAAACTTCGAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
66 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* * *
19043752 TTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTTGAAATGGTCACAAAATC
131 GTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAATGGTCACAAAATC
* * * *
19043817 TTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGTGCTTGCCAACAAAAATACAAGAATCACGTC
195 TTGTACACTTCGAGTTTTTAGCTAAATTTTTTTGGGCATGCCAACAAAAATACAAGGATCATGTC
* * * * * * *
19043882 TACCAAGTTTGTGGACAAAACTCCTTTCGAAAAAATTTTCAAAAATCCCAACTCGCAAAATGTTT
260 TACCAAATTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCGAAC-CGCAAAAAGTTT
* * *
19043947 CAAAAATCATGAAAAATAGAAAACGATTCGTCTTGCCATGAAACTTCACGTGAATGCTTAACGGA
324 CAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
*
19044012 CCATTGTATGAATTTACAAGCCATAAAAAT-GAATTTGGCATGCAAAAATATGAAGATGTGCCTG
389 CCATTGTATGAATTTACAAGCCATAAAAATGGAA-TTGGCATGC-AAAATATGAAGATGTGCCTA
* * *
19044076 AACACAGCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGACGTAGTGCCC
452 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGTCGACGTAGTGCCC
* *
19044141 GCCCGCTCGCCCAC-CAGCTCGTTTCGTCGG
517 GCCTGCCCGCCCACACA-CTCGTTTCGTCGG
19044171 AACGGAGTTC
Statistics
Matches: 1285, Mismatches: 132, Indels: 57
0.87 0.09 0.04
Matches are distributed among these distances:
884 150 0.12
885 80 0.06
886 163 0.13
887 100 0.08
890 1 0.00
891 311 0.24
892 1 0.00
893 2 0.00
895 52 0.04
896 40 0.03
897 112 0.09
898 25 0.02
899 1 0.00
900 18 0.01
901 19 0.01
902 8 0.01
903 52 0.04
904 40 0.03
905 26 0.02
906 24 0.02
907 12 0.01
909 11 0.01
910 20 0.02
911 17 0.01
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.26
Consensus pattern (890 bp):
CGGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
GTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
TGTACACTTCGAGTTTTTAGCTAAATTTTTTTGGGCATGCCAACAAAAATACAAGGATCATGTCT
ACCAAATTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCGAACCGCAAAAAGTTTCA
AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
ATTGTATGAATTTACAAGCCATAAAAATGGAATTGGCATGCAAAATATGAAGATGTGCCTAAACC
CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGTCGACGTAGTGCCCGCCT
GCCCGCCCACACACTCGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATC
AGACCAAACCGAGGGTTACGATAGCAGGATCGACAGCACACAGACGGGGACCCGATCGATCCCCA
GCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGAGTTGACTTAGG
CATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACC
GAGGGTTACGGCAGCACATGCTGGGCTCGAGCATGTGCTAGTGCCATATTTTTCTTCGCTGGGGC
ACCATCGTCGGAGAACCTGACCGACGGCATTGAGGTTCCGACGAT
Found at i:19043489 original size:26 final size:26
Alignment explanation
Indices: 19043452--19043504 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
19043442 GTTGACTTAG
*
19043452 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19043478 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
19043504 G
1 G
19043505 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19044803 original size:606 final size:605
Alignment explanation
Indices: 19043633--19044755 Score: 1641
Period size: 606 Copynumber: 1.9 Consensus size: 605
19043623 ACGATCGGCG
* * * *
19043633 GGGGGTGTGCGCACATGGTGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
1 GGGGGTGTACGCACATGATGTACGATGGGTACTAGTACTTGGCCCTTATATTGGCCCCCTATCCC
19043698 TCATCAAACTTCGAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAG
66 TCATCAAACTTCGAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAG
* ** *
19043763 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTTGAAATGGTCACAAAATCTTGTACACTTC
131 TACCCATTAAAGTGTCTGAAACAGGGACACTTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
* *
19043828 GAGTTTTTAGCTAAATTTTTTTGTGCTTGCCAACAAAAATACAAGAATCACGTCTACCAAGTTTG
196 GAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAGAATCACATCTACCAAGTTTG
* * *
19043893 TGGACAAAACTCCTTTCGAAAAAATTTTCAAAAATCCCAACTCGCAAAATGTTTCAAAAATCATG
261 GGGACAAAACTCCTTTCGAAAAAATTTTAAAAAATCCAAACTCGCAAAATGTTTCAAAAATCATG
* * *
19043958 AAAAATAGAAAACGATTCGTCTTGCCATGAAACTTCACGTGAATGCTTAACGGACCATTGTATGA
326 AAAAATAGAAAACGAGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAACGGACCATTGTATGA
* * * *
19044023 ATTTACAAGCCATAAAAATGAATTTGGCATGCAAAAATATGAAGATGTGCCTGAACACAGCTACC
391 ATTTACAAGCCATAAAAATGAATTTAGCA-GCAAAAATAAGAAGATGTGCCTAAACACACCTACC
* * * * * *
19044088 ACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGACGTAGTGCCCGCCCGCTCGCCC
455 ACCCTATCGATCCACGGCGTGCGCATCCCGCCCCTCTGGCCGACGTAGCGCCCGCACGCTCG-CC
* *
19044153 ACCAGCTCGTTTCGTCGGAACGGAGTTCATTCCCAGTCTAAGATCAGAGCAGATCGAGGGTTGCG
519 ACCAGCTCGTTACGTAGGAACGGAGTTCATTCCCAGTCTAAGATCAGAGCAGATCGAGGGTTGCG
19044218 GCAGCAGGATCGGTGCGACGGA
584 GCAGCAGGATCGGTGCGACGGA
*
19044240 GGGGGTGTACGCACATGATGTGCGATGGGTACTAGTACTTGGCCCTTATATTGGCCCCCTATCCC
1 GGGGGTGTACGCACATGATGTACGATGGGTACTAGTACTTGGCCCTTATATTGGCCCCCTATCCC
* * * * * *
19044305 TCATCAAACCTT-GAGAACTCACACCGCTTTGAAGAGCATTTGAGATTTTACGGGTTTGCTGCCA
66 TCATCAAA-CTTCGAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCA
* *
19044369 GTACCCATTAAAGTGTCTGACACAGGGAGAC-TTTTTTCAAATGGTCACAAAATCTTGTACACTT
130 GTACCCATTAAAGTGTCTGAAACAGGGACACTTTTTTTCAAATGGTCACAAAATCTTGTACACTT
* * *
19044433 CGAGTTTTTTGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTT
195 CGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAGAATCACATCTACCAAGTTT
*
19044498 GGGGCCAAAACTCC-TTCTGAAAAAATTTTAAAAAATCTCAAAC-CGCAAAAAT-TTTCAAAAAT
260 GGGGACAAAACTCCTTTC-GAAAAAATTTTAAAAAATC-CAAACTCGC-AAAATGTTTCAAAAAT
* ** *
19044560 CGTGAAAAATAGAAAACGAGTCGTCTTGGTATAAAACTTCACGTGAAGGCTTAAGGGACCATTGT
322 CATGAAAAATAGAAAACGAGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAACGGACCATTGT
* * *
19044625 ATGATTTTACAAGCCATAAAAATGGCA-TTAGCA-CATAGAAATAAGAAGATGTGCCTAAACCCA
387 ATGAATTTACAAGCCATAAAAAT-GAATTTAGCAGCA-A-AAATAAGAAGATGTGCCTAAACACA
* * *
19044688 CCTACCACCCTATTGATCCCCGGCGTGCGCATCCCGCCCCTCTGGCCGGC-TGAGCGCCCGCACG
449 CCTACCACCCTATCGATCCACGGCGTGCGCATCCCGCCCCTCTGGCCGACGT-AGCGCCCGCACG
19044752 CTCG
513 CTCG
19044756 TTTCGTGGGT
Statistics
Matches: 459, Mismatches: 49, Indels: 17
0.87 0.09 0.03
Matches are distributed among these distances:
604 2 0.00
605 5 0.01
606 298 0.65
607 151 0.33
608 3 0.01
ACGTcount: A:0.29, C:0.24, G:0.20, T:0.26
Consensus pattern (605 bp):
GGGGGTGTACGCACATGATGTACGATGGGTACTAGTACTTGGCCCTTATATTGGCCCCCTATCCC
TCATCAAACTTCGAGAAATCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAG
TACCCATTAAAGTGTCTGAAACAGGGACACTTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
GAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAGAATCACATCTACCAAGTTTG
GGGACAAAACTCCTTTCGAAAAAATTTTAAAAAATCCAAACTCGCAAAATGTTTCAAAAATCATG
AAAAATAGAAAACGAGTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAACGGACCATTGTATGA
ATTTACAAGCCATAAAAATGAATTTAGCAGCAAAAATAAGAAGATGTGCCTAAACACACCTACCA
CCCTATCGATCCACGGCGTGCGCATCCCGCCCCTCTGGCCGACGTAGCGCCCGCACGCTCGCCAC
CAGCTCGTTACGTAGGAACGGAGTTCATTCCCAGTCTAAGATCAGAGCAGATCGAGGGTTGCGGC
AGCAGGATCGGTGCGACGGA
Found at i:19049139 original size:85 final size:89
Alignment explanation
Indices: 19048990--19049178 Score: 273
Period size: 86 Copynumber: 2.2 Consensus size: 89
19048980 GCTCCTCTCC
* *
19048990 AATAAATTGCTCCTCCTAAATAGAGGCACGCACAGCTTTTGAAGAAAATAAAATTGGCTCCTCTA
1 AATAAATTGCTCCTCCTAAACAGAGGCACACACAGCTTTT-AAGAAAATAAAATTGGCTCCTCTA
19049055 AACAGAGGCA-CCACGACTTTGAAA
65 AACAGAGGCACCCACGACTTTGAAA
*
19049079 AATAAATTGCTCCT-CTAAACAGAGGC-CACACGGAC-TTT-AGAAAAGTAAAATT-GCTCCTCT
1 AATAAATTGCTCCTCCTAAACAGAGGCACACACAG-CTTTTAAGAAAA-TAAAATTGGCTCCTCT
19049139 AAACAGAGGCACCCACGACTTTGAAA
64 AAACAGAGGCACCCACGACTTTGAAA
*
19049165 AGTAAATTGCTCCT
1 AATAAATTGCTCCT
19049179 TGACAATCAT
Statistics
Matches: 93, Mismatches: 4, Indels: 9
0.88 0.04 0.08
Matches are distributed among these distances:
85 25 0.27
86 34 0.37
87 8 0.09
88 12 0.13
89 14 0.15
ACGTcount: A:0.38, C:0.23, G:0.16, T:0.23
Consensus pattern (89 bp):
AATAAATTGCTCCTCCTAAACAGAGGCACACACAGCTTTTAAGAAAATAAAATTGGCTCCTCTAA
ACAGAGGCACCCACGACTTTGAAA
Found at i:19049143 original size:44 final size:41
Alignment explanation
Indices: 19049040--19049178 Score: 199
Period size: 44 Copynumber: 3.3 Consensus size: 41
19049030 GAAGAAAATA
*
19049040 AAATTGGCTCCTCTAAACAGAGG-CACCACGACTTTGAAAAAT
1 AAATT-GCTCCTCTAAACAGAGGCCA-CACGACTTTGAAAAGT
19049082 AAATTGCTCCTCTAAACAGAGGCCACACGGACTTTAGAAAAGT
1 AAATTGCTCCTCTAAACAGAGGCCACAC-GACTTT-GAAAAGT
*
19049125 AAAATTGCTCCTCTAAACAGAGGCACCCACGACTTTGAAAAGT
1 -AAATTGCTCCTCTAAACAGAGGC-CACACGACTTTGAAAAGT
19049168 AAATTGCTCCT
1 AAATTGCTCCT
19049179 TGACAATCAT
Statistics
Matches: 90, Mismatches: 2, Indels: 10
0.88 0.02 0.10
Matches are distributed among these distances:
41 20 0.22
42 24 0.27
43 13 0.14
44 29 0.32
45 4 0.04
ACGTcount: A:0.37, C:0.24, G:0.17, T:0.22
Consensus pattern (41 bp):
AAATTGCTCCTCTAAACAGAGGCCACACGACTTTGAAAAGT
Found at i:19050199 original size:9 final size:9
Alignment explanation
Indices: 19050187--19050253 Score: 63
Period size: 9 Copynumber: 7.8 Consensus size: 9
19050177 CCTTTTTCAC
19050187 TTTTTC-TT
1 TTTTTCATT
19050195 TTTTTCATTTT
1 TTTTTCA--TT
*
19050206 TTTTTC-TA
1 TTTTTCATT
19050214 TTTTTCA--
1 TTTTTCATT
19050221 -TTTTCATT
1 TTTTTCATT
*
19050229 TTTTCCATT
1 TTTTTCATT
19050238 TTTTTCATT
1 TTTTTCATT
19050247 TTTTTCA
1 TTTTTCA
19050254 AGCATAGTAC
Statistics
Matches: 49, Mismatches: 3, Indels: 13
0.75 0.05 0.20
Matches are distributed among these distances:
6 6 0.12
8 13 0.27
9 22 0.45
11 8 0.16
ACGTcount: A:0.10, C:0.13, G:0.00, T:0.76
Consensus pattern (9 bp):
TTTTTCATT
Found at i:19050207 original size:8 final size:8
Alignment explanation
Indices: 19050179--19050250 Score: 51
Period size: 8 Copynumber: 8.6 Consensus size: 8
19050169 TGAGTCTTCC
*
19050179 TTTTTCAC
1 TTTTTCAT
*
19050187 TTTTTCTT
1 TTTTTCAT
19050195 TTTTTCATTTT
1 TTTTTCA---T
19050206 TTTTTC-T
1 TTTTTCAT
19050213 ATTTTTCA-
1 -TTTTTCAT
19050221 -TTTTCAT
1 TTTTTCAT
19050228 TTTTTCCATT
1 TTTTT-CA-T
19050238 TTTTTCAT
1 TTTTTCAT
19050246 TTTTT
1 TTTTT
19050251 TCAAGCATAG
Statistics
Matches: 52, Mismatches: 3, Indels: 18
0.71 0.04 0.25
Matches are distributed among these distances:
6 6 0.12
7 1 0.02
8 28 0.54
9 4 0.08
10 6 0.12
11 7 0.13
ACGTcount: A:0.10, C:0.14, G:0.00, T:0.76
Consensus pattern (8 bp):
TTTTTCAT
Found at i:19060623 original size:56 final size:56
Alignment explanation
Indices: 19060561--19060831 Score: 442
Period size: 57 Copynumber: 4.9 Consensus size: 56
19060551 TTTTGTGTAG
19060561 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTGAAATTTATTTTCAA
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTGAAATTTATTTTCAA
*
19060617 GGAAAATTGATACTTTCAACTTTT-CCTAAAA-A-TTTTTTGAAAATTTATTTT-AA
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTG-AAATTTATTTTCAA
*
19060670 GGAAAATTGATACTTTCAACTTTTCCCAAAAATTTTTTTTTGAAATTTATTTTCAA
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTGAAATTTATTTTCAA
* * *
19060726 GGAAAATTGATACTTTCAACTTTTCCTAAAAATATTTTTTTTGAAATTTTTTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATA-TTTTTTTGAAATTTATTTTCAA
19060783 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTTGAAATTT
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATA-TTTTTTTGAAATTT
19060832 TGATTTTTAT
Statistics
Matches: 201, Mismatches: 8, Indels: 11
0.91 0.04 0.05
Matches are distributed among these distances:
53 33 0.16
54 18 0.09
55 17 0.08
56 65 0.32
57 68 0.34
ACGTcount: A:0.35, C:0.11, G:0.07, T:0.46
Consensus pattern (56 bp):
GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTGAAATTTATTTTCAA
Found at i:19060752 original size:109 final size:112
Alignment explanation
Indices: 19060561--19060831 Score: 476
Period size: 109 Copynumber: 2.4 Consensus size: 112
19060551 TTTTGTGTAG
*
19060561 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTGAAATTTATTTTCAAGGAAAATTG
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATTTTTTTTTGAAATTTATTTTCAAGGAAAATTG
19060626 ATACTTTCAACTTTTCCT-AAAA-A-TTTTTTGAAAATTTATTTTAA
66 ATACTTTCAACTTTTCCTAAAAATATTTTTTTGAAAATTTATTTTAA
19060670 GGAAAATTGATACTTTCAACTTTTCCCAAAAATTTTTTTTTGAAATTTATTTTCAAGGAAAATTG
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAATTTTTTTTTGAAATTTATTTTCAAGGAAAATTG
* *
19060735 ATACTTTCAACTTTTCCTAAAAATATTTTTTTTGAAATTTTTTTTTAA
66 ATACTTTCAACTTTTCCTAAAAATA-TTTTTTTGAAAATTTATTTTAA
19060783 GGAAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTTGAAATTT
1 GGAAAATTGATACTTTCAACTTTTCCCAAAAAT-TTTTTTTTGAAATTT
19060832 TGATTTTTAT
Statistics
Matches: 154, Mismatches: 3, Indels: 5
0.95 0.02 0.03
Matches are distributed among these distances:
109 82 0.53
110 4 0.03
111 1 0.01
113 52 0.34
114 15 0.10
ACGTcount: A:0.35, C:0.11, G:0.07, T:0.46
Consensus pattern (112 bp):
GGAAAATTGATACTTTCAACTTTTCCCAAAAATTTTTTTTTGAAATTTATTTTCAAGGAAAATTG
ATACTTTCAACTTTTCCTAAAAATATTTTTTTGAAAATTTATTTTAA
Found at i:19060876 original size:10 final size:10
Alignment explanation
Indices: 19060863--19060993 Score: 66
Period size: 10 Copynumber: 13.4 Consensus size: 10
19060853 ATAATAAAAA
19060863 AAAAATAAAT
1 AAAAATAAAT
19060873 AAAAAT--A-
1 AAAAATAAAT
*
19060880 AAAAATAAAG
1 AAAAATAAAT
* *
19060890 AAAAGTAAAAC
1 AAAAAT-AAAT
19060901 AAAAATAAAT
1 AAAAATAAAT
19060911 -AAAATAAAGAT
1 AAAAAT-AA-AT
*
19060922 AAAAA-GAAT
1 AAAAATAAAT
*
19060931 ATTAAATAAACCT
1 A-AAAATAAA--T
**
19060944 -AATCT-AAT
1 AAAAATAAAT
19060952 AAATAATAAA-
1 AAA-AATAAAT
19060962 AAAAA-AAAT
1 AAAAATAAAT
19060971 AAAAATAAAT
1 AAAAATAAAT
19060981 AAAAATAAA-
1 AAAAATAAAT
19060990 AAAA
1 AAAA
19060994 TTCAAAAAAA
Statistics
Matches: 93, Mismatches: 12, Indels: 33
0.67 0.09 0.24
Matches are distributed among these distances:
7 6 0.06
8 5 0.05
9 22 0.24
10 39 0.42
11 16 0.17
12 4 0.04
13 1 0.01
ACGTcount: A:0.76, C:0.03, G:0.03, T:0.18
Consensus pattern (10 bp):
AAAAATAAAT
Found at i:19060879 original size:21 final size:21
Alignment explanation
Indices: 19060855--19060993 Score: 88
Period size: 22 Copynumber: 6.5 Consensus size: 21
19060845 AGAAAAAGAT
19060855 AATAAAAAAAAAATAAATAAA
1 AATAAAAAAAAAATAAATAAA
19060876 AATAAAAAATAAAGA-AAAGT-AA
1 AATAAAAAA-AAA-ATAAA-TAAA
* *
19060898 AA-CAAAAATAAATAAAATAAA
1 AATAAAAAAAAAAT-AAATAAA
* * *
19060919 GATAAAAAGAATATTAAATAAA
1 AATAAAAA-AAAAATAAATAAA
** ** *
19060941 CCTAATCTAATAAAT-AATAAA
1 AATAA-AAAAAAAATAAATAAA
*
19060962 AAAAAAAATAAAAATAAATAAA
1 AATAAAAA-AAAAATAAATAAA
19060984 AATAAAAAAA
1 AATAAAAAAA
19060994 TTCAAAAAAA
Statistics
Matches: 86, Mismatches: 21, Indels: 22
0.67 0.16 0.17
Matches are distributed among these distances:
19 1 0.01
20 4 0.05
21 35 0.41
22 40 0.47
23 6 0.07
ACGTcount: A:0.77, C:0.03, G:0.03, T:0.17
Consensus pattern (21 bp):
AATAAAAAAAAAATAAATAAA
Found at i:19060974 original size:6 final size:6
Alignment explanation
Indices: 19060949--19060991 Score: 54
Period size: 6 Copynumber: 7.3 Consensus size: 6
19060939 AACCTAATCT
*
19060949 AATAAA TAATAAA AAAAAA AATAAA AAT--A AATAAA AATAAA AA
1 AATAAA -AATAAA AATAAA AATAAA AATAAA AATAAA AATAAA AA
19060992 AATTCAAAAA
Statistics
Matches: 32, Mismatches: 2, Indels: 5
0.82 0.05 0.13
Matches are distributed among these distances:
4 4 0.12
6 22 0.69
7 6 0.19
ACGTcount: A:0.84, C:0.00, G:0.00, T:0.16
Consensus pattern (6 bp):
AATAAA
Found at i:19061000 original size:16 final size:15
Alignment explanation
Indices: 19060855--19061009 Score: 88
Period size: 15 Copynumber: 10.1 Consensus size: 15
19060845 AGAAAAAGAT
19060855 AATAAAAA-AAAAATA
1 AATAAAAATAAAAA-A
19060870 AATAAAAAT--AAAA
1 AATAAAAATAAAAAA
**
19060883 AATAAAGAA-AAGTAA
1 AATAAA-AATAAAAAA
* *
19060898 AACAAAAATAAATAA
1 AATAAAAATAAAAAA
* *
19060913 AATAAAGATAAAAAG
1 AATAAAAATAAAAAA
* *
19060928 AATATTAAATAAACCTAA
1 AATA-AAAATAAA--AAA
**
19060946 TCTAATAAATAATAAAA
1 AATAA-AAATAA-AAAA
19060963 AA-AAAAATAAAAATA
1 AATAAAAATAAAAA-A
19060978 AATAAAAATAAAAAA
1 AATAAAAATAAAAAA
*
19060993 ATTCAAAAA-AAAAAA
1 AAT-AAAAATAAAAAA
19061008 AA
1 AA
19061010 AACCTGAGCG
Statistics
Matches: 107, Mismatches: 20, Indels: 26
0.70 0.13 0.17
Matches are distributed among these distances:
13 7 0.07
14 10 0.09
15 54 0.50
16 24 0.22
17 2 0.02
18 9 0.08
19 1 0.01
ACGTcount: A:0.77, C:0.03, G:0.03, T:0.17
Consensus pattern (15 bp):
AATAAAAATAAAAAA
Found at i:19061000 original size:25 final size:24
Alignment explanation
Indices: 19060855--19061011 Score: 88
Period size: 24 Copynumber: 6.5 Consensus size: 24
19060845 AGAAAAAGAT
19060855 AATAAAAAAAAAATAAATAAAAATA
1 AATAAAAAAAAAA-AAATAAAAATA
* * * *
19060880 AA-AAATAAAGAAAAGTAAAACAAA
1 AATAAAAAAAAAAAAATAAAA-ATA
* * *
19060904 AATAAATAAAATAAAGATAAAAAGA
1 AATAAA-AAAAAAAAAATAAAAATA
* * *** **
19060929 ATATTAAATAAACCTAAT-CTAATA
1 A-ATAAAAAAAAAAAAATAAAAATA
19060953 AATAATAAAAAAAAAAATAAAAATA
1 AATAA-AAAAAAAAAAATAAAAATA
* **
19060978 AATAAAAATAAAAAAATTCAAA-A
1 AATAAAAAAAAAAAAATAAAAATA
19061001 AA-AAAAAAAAA
1 AATAAAAAAAAA
19061012 CCTGAGCGGC
Statistics
Matches: 96, Mismatches: 30, Indels: 15
0.68 0.21 0.11
Matches are distributed among these distances:
22 8 0.08
23 13 0.14
24 38 0.40
25 22 0.23
26 15 0.16
ACGTcount: A:0.78, C:0.03, G:0.03, T:0.17
Consensus pattern (24 bp):
AATAAAAAAAAAAAAATAAAAATA
Found at i:19062148 original size:159 final size:159
Alignment explanation
Indices: 19061879--19062227 Score: 491
Period size: 159 Copynumber: 2.2 Consensus size: 159
19061869 ATCGGTCGGA
* * * * **
19061879 TTAGGCATACGGAGTTCACTCCCAGTCTAAGATTGGACCGGACCGAGGGTTACGGCAGCAAGATC
1 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTACAACAGCAAGATC
** * * *
19061944 GGCAGCACGTAGAGGAAGACCCGACCGATCCTCGACTTGCACATCCTGCCCCTCTGGCCGGCTGA
66 AACAGCACGCAGAGGAAGACCCGACCGATCCCCGACTTGCACATCCCGCCCCTCTGGCCGGCTGA
19062009 GCACCCACACGCTCGTTTCGTGGGTTGAC
131 GCACCCACACGCTCGTTTCGTGGGTTGAC
** * * *
19062038 TTAGGCATACGGAGTTCATTCATAGTCTAAGATCGGACCAGACCAAGGGTTACAATAGTAGGATC
1 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTACAACAGCAAGATC
** * *
19062103 AACAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCACATCCCGCCCCTTTGGCCGGTTGA
66 AACAGCACGCAGAGGAAGACCCGACCGATCCCCGACTTGCACATCCCGCCCCTCTGGCCGGCTGA
* *
19062168 GCGCCCGCACGCTCGTTTCGTGGGTTGAC
131 GCACCCACACGCTCGTTTCGTGGGTTGAC
*
19062197 TTAGGCATATGGAGTTCATTCCCAGTCTAAG
1 TTAGGCATACGGAGTTCATTCCCAGTCTAAG
19062228 CATACGAAGT
Statistics
Matches: 165, Mismatches: 25, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
159 165 1.00
ACGTcount: A:0.22, C:0.30, G:0.28, T:0.21
Consensus pattern (159 bp):
TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTACAACAGCAAGATC
AACAGCACGCAGAGGAAGACCCGACCGATCCCCGACTTGCACATCCCGCCCCTCTGGCCGGCTGA
GCACCCACACGCTCGTTTCGTGGGTTGAC
Found at i:19063140 original size:26 final size:26
Alignment explanation
Indices: 19063104--19063156 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
19063094 GTTGACTTAG
19063104 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19063130 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
19063156 G
1 G
19063157 ATCAGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:19064897 original size:26 final size:26
Alignment explanation
Indices: 19064867--19064917 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
19064857 GTTGACTTAG
19064867 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
19064893 GCATACGAATTTCATTCCCAGTCTA
1 GCATACGAAGTTCATTCCCAGTCTA
19064918 TGATCGGATC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.27, G:0.14, T:0.29
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:19065275 original size:878 final size:881
Alignment explanation
Indices: 19064001--19074044 Score: 10665
Period size: 870 Copynumber: 11.2 Consensus size: 881
19063991 GTTGACTTAG
* * * * *
19064001 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGGTTGCAGCGCAACACATACTG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGC-G-GCAGCACATGCTG
* * * * * *
19064066 GGCTCGGGCATGTGCTGGTGTCGAATTTTTCTTCGTCGGGGCAACTTCGCTGGAGTATCGTCAGA
64 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGC-AC--C-ATCG-G---C-TCGGA
* * * * *
19064131 GAACCTAACCGGCGGCATTGAGGTTCCGACGATAGGGGGGTCGGGGGGTGTGCGCACATGATGTG
120 GAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
19064196 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
185 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
19064261 ACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
250 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
19064326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCT-AGTTTTTAGCTGAATTTTTTT
315 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT-TGAGTTTTTAGCTGAATTTTTTT
* ** ** * *
19064390 GTGCATGCTAAAGAAAATACAAGGATCACGTCTAATAAGTTTGATGCCAGAACTCTTTCCGAAAA
379 GTGCATGCCAAA-AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * ** * *
19064455 TATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCT
443 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * *
19064520 TGCCGTGAAACTTCAAGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGC
508 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
19064585 ATTGGCACGTAAAAATATGAAGATGTGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTGC
573 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
19064650 GCATCCCGTCTCTCTGGCCTGCGTGGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTCG
638 GCATCCCGTCTCTCTGGCC-GCGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
19064715 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGC-GG-TAGCACA
702 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCAGGATAGCACA
* * *
19064778 TAGAGGGGGACCCGATCGATCCCCAGCTTGCGCATCCCGCCCCTTTGGCTGGCTGAGCGCCCGCA
767 TAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
19064843 CGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
832 CGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * * * *
19064893 GCATACGAATTTCATTCCCAGTCTATGATCGGATCGGACCAAGGGTTGCGGCAGTACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
19064958 CTCAGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATC-GC-CGGAGAACCTGACCG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGGCTCGGAGAACCTGACCG
* * * * *
19065021 ACGGCATTGGGGTTTCGATGATCGGGGGACCGGAGGGTGTGCACACATGATGTGCGATGGGTGCT
131 ACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
*
19065086 GGTACGTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTAAA
196 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * *
19065150 GAGCATTTGAGAATTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACGTT
261 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
** *
19065215 TTTCAAATAATCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAA
326 TTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AA
* * ** * *
19065280 AAAAATACAACGATCACGTCTACCATGTTTGGTTCCAAAACTCTTTCTGAAAAAATTTTAAAAAA
390 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * ** * *
19065345 TCCAGAACCGCAAAAGGTTTTGAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATAAAACT
455 TCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * * *
19065410 TCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGGATTGGCACACAG
520 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
*
19065475 AAATATGAAGATGTGCCTAAAACCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
585 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* *
19065540 TCTAGCCTGCGT-G-G--TGCCTGCCCG---G-CCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
650 TCTGGCC-GCGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * * **
19065597 GAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGC-GG-CAGCACGCAGAGGGGGACC
714 GAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCAGGATAGCACATAGAGGGGGACC
* * * *
19065660 CG-TCCGATCCCCAGCTTGTGCATCCCGCCCCTTTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
779 CGAT-CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCA
19065724 TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
843 TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * *
19065763 GCATACGAAGTTCATTCCCAGTCTATGATCGGATCGGACCGAGGGTTACGGCAGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
19065828 CTCGGGCAAGTGCTGGTACCGCATTTTTCTTCGTCGGGGCACCATC-GC-CGGAGAACCTGACCG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGGCTCGGAGAACCTGACCG
* * * *
19065891 ATGGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGTGTGCGCACATGATGTGCCATGGGTGTT
131 ACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* *
19065956 GGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAAACCTCGAGAACTCACA-CCCCTTACA
196 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
19066020 GAGCATTTGAGATTTTAACAGG-TTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT-GGGACAC-T
261 GAGCATTTGAGATTTT-ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * *
19066082 TTTTCAAATGGTTACAAACTC-TGTACACTTTGAGTTTTTAGCTGAA-TTTTTTATGCATGCCAA
325 TTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * *
19066145 CAAAAATAAAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAA
390 -AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * *
19066210 ATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCACGAAAC
454 ATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
19066275 TACACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCA--C-
519 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCA
** * ** *
19066337 ---ATA-G-AG--G-G---GGACCCGA--T------CGATC-A-CC-CGGCTTGCGCATCTTGAC
584 GAAATATGAAGATGTGCCTAAACCC-ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * * * * * **** * * * *
19066380 GCTCTTGTCG-GTTGAG-C-ACCCGCACGCTCATTTCG-TAGGTTGACGTAGACATATGGAGTTC
648 TCTCTGGCCGCGTAGTGCCTGCCCGCCCGC-CCGCCCGCT-CGTT-TCGTCG--GT-T-G-G--C
* *
19066441 ATTCCCAGTATAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCAAGGGTTGTGGC
703 -TT---AG-----GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGG-T-T-GC
** * * * ** * * *
19066506 AGCAGTATCGGTAGCACGCAAAAGGGGACTCGATCGATCCTTGGCTTACGCATCCCGCCCGTCTT
756 AG--G-A----TAGCACATAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
* * * *
19066571 GCCAGTTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATA-TAGAGTTCATTCCCAGT
814 GCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGT
19066635 CTAA
878 CTAA
* ** * * * **
19066639 GTATACGGAGTTCATTCCCAGTCTAATTTTGGACCAGACCGAGGGTTGCAACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19066704 CTCGGGCATGTGCTAGTGTCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTTGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCAT---C-G-GC-TC---GGAGA
* **
19066769 ACCT-AGCCGGCGGCATTGGGGTTCTAACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
122 ACCTGA-CCGACGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
19066833 CGATGGGTGTTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCGAGAACTCAC
185 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
19066898 ACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAAT
250 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
19066963 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTA
315 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTG
* * * *
19067028 TGCATGCCAACCAAAATACAAGGATCACGTCTAGCAAGTTTGGCGCCAAAACTCTTTCCGAAAAA
380 TGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * *
19067093 ATTTAAAAAAATCCCGAATCGTAAAAAGTTTCAAAAATCATAAAAAATAGCAAAACGAGTCGTCT
444 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAG-AAAACGAGTCGTCT
* *
19067158 TGCCATGAAACTTCACGTGAAGGCTTAACGGACCATTGTATGAATTTACCAGCCATAAAAATGGC
508 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
19067223 ATTGGCATGCAGAAAT-TGGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTA
573 ATTGGCACGCAGAAATAT-GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * * *
19067287 CGAATCCTATCTCTCTGGCCGGCGTATTGCCCGCCCGCCTGCCCGCCTGCCCGCTCGTTTCGTCG
637 CGCATCCCGTCTCTCTGGCC-GCGTAGTGCCTG--C-CC-GCCCGCCCGCCCGCTCGTTTCGTCG
* * *
19067352 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-GAACCCGACCAAGGGTTACAGTAG
697 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGGATCGAGGG-T----T-G
* * * ** * *
19067416 CAGGATCAGTAGCACGTAGAGAGGGACCTGATCGATCCCCGGCTTATGCATCCCGCCCCTGTAGC
755 CAGG---A-TAGCACATAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * * *
19067481 CGGCTGAGTGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACG-AGTTCGTTCCCAATCTA
816 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTA
19067545 A
881 A
* * * * ** *
19067546 GCATACGGAGTTCATTCCAAGTCTAAGATTGGATCAGACCGAGGGTTACGATAGCAAATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19067611 CTCGAGCATGTGCTGGGGACGTATTTTTCATT-GCCGGGGCACCCTCTTCGGAGCATCATCGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTC-TTCGCCGGGGCA--C-CATC-G-G---C-TCGGAG
*** *
19067675 AACCTGACCGGTAGCATTGGGGTTCCAACGATCGGGGGGGCCGGGGGGCAGTGTGCGCACATGAT
121 AACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC-GGGGG--GTGTGCGCACATGAT
* *
19067740 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCAAGAACT
182 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
19067805 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCTGTAGCCGTTAAAGTGTCTGA
247 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
19067870 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
312 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
* * *
19067935 TTGTGCACGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACACCATT-CTA
377 TTGTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCGA
* * * *
19067999 AAAAATTTT-TAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCG
440 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
* *
19068063 TCTTGCCATGAAACTTCACGTGAAAGCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAAT
505 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* *
19068128 GGCATTGGCACGTAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCT
570 GGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * *
19068193 TGCACATCCCGTCTCTCTGGCCGGCGTAGTG-CTCGCCCGCCTGCCCACCCACTCGTTTCGTCGG
635 TGCGCATCCCGTCTCTCTGGCC-GCGTAGTGCCT-GCCCGCCCGCCCGCCCGCTCGTTTCGTCGG
* * *
19068257 TTGGCTTAGACATACGGAGTTCATTCCCAGTCTAAGATCGGACTC-GACCGAGGGTTGCGGCAGC
698 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC-CGGATCGAGGGTT------GC
* * * *
19068321 AGGATAGGCAGCATGCAGAGGAGGTCCCGGTCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCC
756 AGGATA-GCA-CAT--AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
* *
19068386 GGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGATCATTCCTAGTCTAA
817 GGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * * *
19068451 GCATACGAAGTTCATTCCCAATCTAAGATCGGACCGGACCGAGGGCTGCGGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19068516 CTCGGGCATGTGCTGGTG-CACATTTTTCTTTGTCGGGGGCACCATCATCGGCAGCACGCGAAAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG-CCGGGGCA-C--CATC-G--GCTCG-G-AGA
* * *
19068580 ACCTGACCGACAGCGGATTCGGGCGTTCCAAGCGATCGGGGGGCCGGGGGGTGTGCGCACATTAT
122 ACCTGACCGAC-G-GCATT-GGG-GTTCCGA-CGATCGGGGGGCCGGGGGGTGTGCGCACATGAT
* *
19068645 GTGCCCATGGGTGCTGGTACTTAGCCCTCTATATAGCTGGCCCCCTACTCCCT-ATC-AACCTCG
182 GTG-CGATGGGTGCTGGTACTTGGCCCT-TATAT---TGGCCCCCTA-TCCCTCATCAAACCTCG
* *
19068708 AGAACTCACACCCCCTTAAAGTGCATTTG-GAATTTACAGG-TTGCTGCCAGTAGCCATTAAAGT
241 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * * *
19068771 GTTTAAAATGGGGACAC-GTTTTCAAAATGGTCACAAAATCCTTGTACA-TTTCGAG-TTTGAGC
306 GTCTGAAATGGGGACACTTTTTTC-AAATGGTCACAAAAT-CTTGTACACTTT-GAGTTTTTAGC
* * * * * *
19068833 TGAATGGTTTTTGTACATGCTACAATAAAT-CAAGGATCACGTCCACCCA-TCGTTGGGGCCAAA
368 TGAAT-TTTTTTGTGCATGCCA-AAAAAATACAAGGATCACGTCTACCAAGT--TTGGGGCC-AA
* * * * *
19068896 AAC-CTTTCCG-AAACATTTTAAAAAATCTGCG-ACCGTAAAAAATTTTCCAAAAATCGTGAAAA
428 AACTCCTTCCGAAAAAATTTTAAAAAATC-CCGAACCG-CAAAAAGTTT-CAAAAATCGTG-AAA
19068958 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGG-CCATTGTATGAAT
489 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT-AAGGGACCATTGTATGAAT
* * *
19069022 TTAGAAGCCATAAAAATGGCATTGGCACGCAGAAATATAAAGATGTGCCTAAACTCACCTACCAC
553 TTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
* * * *
19069087 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGACGTTGTGCCCGCCCGCCCGCCCGT
618 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG-CGTAGTGCCTGCCCGCCCGCCCGC
* * * * *
19069152 CTGCTCGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTGTAAGATCAGACTGGACC
682 CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATC
* * * *
19069217 GAGGGATGCGACAGCAGGATCGACTACATGCAGAGGGGGACTCGGTCGATCCCCGGCTTGCGCAT
747 GAGGG-T-----TGCAGGATAG-C-ACAT--AGAGGGGGACCCGATCGATCCCCGGCTTGCGCAT
* * * * *
19069282 CCTGCCCCTCTGGCTGGCTGAGCACCCGCATGCTCGTTTCATGGGTTGACTTAGGCATACGGAGT
802 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGT
19069347 TCATTCCCAGTCTAA
867 TCATTCCCAGTCTAA
19069362 GCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGAC
1 GCATACGGAGTTCATTCCCAG--T---C-T---AAG---A-T--C-G-----GATC-G----GAC
* * * * *
19069427 CGAGGGTTGTGGCAGCACATGCTGGGCTCGAGCATGTGTTGGTGCCGTATTTTTCTTCGCCAGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG
*
19069492 CACCATCGCCCGAGCATCACCAGAGAACCTGACCGACGG-ATTGGGGTTCC-AGCGATCGGGGGG
105 CACCAT----CG-GC-T---CGGAGAACCTGACCGACGGCATTGGGGTTCCGA-CGATC-GGGGG
* * * *
19069555 GCCGGGGGGGCGTGCGCACATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTAGCTCCCT
159 GCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* *
19069620 ATCCCTCATCAAACCTTGACAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
223 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* *
19069685 GCCAGTTGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTATACA
288 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
*
19069750 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
353 CTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAG
* * ** *
19069815 TTTGGGGCAAAAACTACTTCCGAAAAAATTTTAAAAAATCCTAAACTGCAAAAAGTTTCAAAAAT
417 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAAT
* *
19069880 CGTGAAAAATAGAAAACGAGACGCCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
482 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
* * *
19069945 ATGAA--T--------T-----TGGCATTGTCACGTAGAAATATGAAGATGTACCTAAACCCACC
547 ATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACC
* * * * *
19069995 TACCATCCTATCGATCCACGGCTTGCACATCCCGTCTCTTTGGCCGACGTAGTGCCCGTCCGCCC
612 TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG-CGTAGTGCCTGCCCGCCC
*
19070060 GCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAGAGATCAGA
676 GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA-AGATCAGA
** * * * * * ** *
19070125 -TTGAGCTGAGGGTTACAGTAGCAGGATCGACAGGACACAGAAGGGCACCCGGCCGATCCCCGGA
740 CCGGATC-GAGGG-T----T-GCAGGAT----AGCACATAGAGGGGGACCCGATCGATCCCCGGC
* * * *
19070189 TTGCGCATCCCACCCCTCTGGCCGGTTGAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCA
794 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCA
*
19070254 TA-TAGAGTTCATTCCCAGTCTAA
859 TACGA-AGTTCATTCCCAGTCTAA
* * * * *
19070277 GCATACGGAGTTCATTCCCAATGTAAGATCAGATCGGACCAAGGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19070342 CTCGGGCATGTGCTGGTGCTGCATTTGTCTTCGTCGGGGCACCATTACTGGAGCATCGTCGGAAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCA-T-C--G-G---C-TCGGAGA
* * * *
19070407 ACCTGATCGACGGCATTAGGGTTTC-AGTGAT-GGAAGGGGCCGGGGGGTGTGCGCACATGATGT
122 ACCTGACCGACGGCATTGGGGTTCCGA-CGATCGG--GGGGCCGGGGGGTGTGCGCACATGATGT
* * * *
19070470 GCCATGGGTGCTGGTACTTGACCCTTATACTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCA
184 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
19070535 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG-CAATAGCCATTAAAGTGTCTGAAA
249 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * * *
19070599 TGGGGACACTTTTTTCAAATGGTTATAAAATGTTGTACACTTCGTG-TTTTAGCTGAA-TTTTTT
314 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTT
*
19070662 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAG-TTGGGGCCAAAACTCCTTCCAAAAA
379 GTGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * *
19070726 AATTTTAAAAAATCTCGAACCCCAAAAAGTTTCAAAAAATCGTGAAAAATAGAAAACGAGTCGCC
443 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTC-AAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * *
19070791 TTGCCATGAAACTTCACGTGTAGGCTTAAGGGACCATTGTAAGAATTTTCAAGCCA-AAAAATTG
507 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA-TG
*
19070855 GCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
571 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * *
19070920 GCGCATCACATCTCTTTGGCCGACGTAGTGCCCGTCCGCCCGCCCGCCCGCTCGTTTTGTCGGTT
636 GCGCATCCCGTCTCTCTGGCCG-CGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTT
* * * * * *
19070985 GGCTTAGGCATACGGAGTTCATTTCGAATCTAAAATCAGACTGGATTGAGGGTTGCAATAGTAGG
700 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGC------AGG
* *
19071050 ATTGACAGCATACAGAGGGGGACCCG-GCTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
759 ATAG-CA-CAT--AGAGGGGGACCCGATC-GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* ** * * * *
19071114 CTGAGCGCCCACACGCTTATTTCGTGGGTTGACTTAGGCATAAGGAGTTCATTCCCAGTCTAG
819 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * * *
19071177 GCTTACGGAGTTCATTCCGAGTCTAAGATCGG-TCCAGAGCGAAGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGAT-CGGACCGAGGGTTGCGGCAGCACATGCTGG
* ** * * **
19071241 GCTCGAGCATGTGCTGGT-CTTACATTTTTCTTCGTCGGGGCATC-TTTG-TCGGAGAA-CTGAC
65 GCTCGGGCATGTGCTGGTGC-CGCATTTTTCTTCGCCGGGGCACCATCGGCTCGGAGAACCTGAC
* * ** * * *
19071302 CGGCCGCATTTAGCTTCCGGCGATCGGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCCATGG
129 CGACGGCATTGGGGTTCCGACGATC-GGGGGGCC--GGGGGGTGTGCGCACATGATGTGCGATGG
* *
19071367 GTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCC
191 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
19071432 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
256 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
19071497 ACTTTTTTCAAATGGTCACAAAATCTT-TACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATG
321 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATG
* *
19071561 CCAAAAAAAATACAAGGATCACGTCTACCATGTTTGGGGCCAAAACTCCTTCCGAAAAAGTTTT-
386 CC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
* * * *
19071625 AAAAATCTCGAACCGTAAAAAGTTTCGAAAAAT-GTGAAAAATAAAAAAGGAGTCGTCTTGCCAT
450 AAAAATCCCGAACCGCAAAAAGTTTC-AAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
* *
19071689 GAAACTTCACGTCAAAGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
514 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
* * * *
19071754 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCGTATCGATCCATGGCTTGTGCATCC
579 ACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* *
19071819 CGCCTCTCTGGCCGACGT--TG--TGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGG
644 CGTCTCTCTGGCCG-CGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* ** * * * * *
19071880 CGTACGGAGTTCATTCCCAGTCTAAGATTGGACTGGATTGAGTGTTACGATAGCAGGATCGGTAG
708 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAG-G----G-TTGCAGGAT-AGCA-
* ** * * * * * * * *
19071945 CATGCAGAGTGGGACCTAACCGATCCCTGGCTTGTGCATCTCACACCTCTGGCCGACTGAGCGCT
765 CAT--AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
* *
19072010 CGCACGCTCGTTTCATGGGCTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
828 CGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* *
19072064 G-AT-C--AG---A---CC-G-----GATC-GAT---------GGTTACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
19072103 CTCGGGCATGTGCAGGTGCTGCATTTGTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCAT---C-G-G---C-TCGGAGA
* ** *
19072168 ACCTGACCGGTC-GCATTGGGGTTCCGGTGATC-----G--GGGGGGTGTGCACACATGATGTGC
122 ACCTGACC-GACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
19072225 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
186 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
** * * *
19072290 CCCTTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGTCATTAAAGTGTCTAAAATG
251 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19072355 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTAAATTGTTTTGT
316 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
** *
19072420 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGTAAAAACTCCTTCCAAAAAAA
381 GCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* *
19072485 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTCGTCTTG
445 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
19072550 CCATGAAACTTCACGTGCAGGCCTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
510 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* *
19072615 TGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCACGGCTTGCGC
575 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * **
19072680 ATCCCGTCTTTCTGGCCGACGTAGTG-CT---CGGCCGCTCGCCCGCTCGTTTCGTTAGTTGGCT
640 ATCCCGTCTCTCTGGCCG-CGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCT
* * *
19072741 TAGGC-TACGGAGTTCATTCCCAGTCTAAGATCAGATCGGATTGAGAGTTGTGGCAGCAAGATCG
704 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAG-G--GTTGCAG---GA---
** * * * * * * *
19072805 GTAGCACGCAGAGGGGGACCCGACCGATCCCTGTCTTACGCATCCCACCCCTCTGGTCGGATGAG
760 -TAGCACATAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
*
19072870 CGCCCGCACGCTTGTTTCATGGGTTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTAA
824 CGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGTCTAA
* * *
19072928 GCATACGGAGTTCATTCCCATTCTAAGATCGGA-CTGGACCGAGGGTT-CTGACAGCAAATGCTG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATC-GGACCGAGGGTTGC-GGCAGCACATGCTG
** * * * * *
19072991 GGCTCCAGCATGTGCTGGTGTCGTATTTTTTTTCACTGGGGCACCATCGTCGGAGCATTGTCGGA
64 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCA---TC-G-GC----TCGGA
* * * * * *
19073056 GAACCTGACCGGCGGCATTGGGGTTCTGGCGATCGCGGGGTCGGGGGGGTATGCGCACATGATGT
120 GAACCTGACCGACGGCATTGGGGTTCCGACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGT
*
19073121 GCGAT-GGTGCTGGTACTTGGCCCTTATATTGG-CCCCTATCCCACATCAAACCTCGAGAACTCA
184 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
19073184 GACCCCCTTAAAAAGCATTTGAGA-TTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
249 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
19073248 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
314 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTT
* ** **
19073313 GTGCAAGCCAAAACAAATACAAGGATCATTTCTACCATTTTTGGGGCCAAAACTCCTTCCGAAAA
379 GTGCATGCCAAAA-AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * * *
19073378 AATTTTAAAAAATCCCGAACCGAAAAAAGTTTTAAAAATCATGAAAAATAGAAAATGGGTCATCT
443 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * *
19073443 TGCTATGAAACTTCAACGTGAAGG-TTAAGGGACCATTGTATCGAATTTACAAGCCCTAAGAATG
508 TGCCATGAAACTTC-ACGTGAAGGCTTAAGGGACCATTGTAT-GAATTTACAAGCCATAAAAAT-
** * *
19073507 GGCATTCGGCACATAGAAATAT-AAGCTGTGCCT-AAGCCACCTA-CACCCTATCGATCCACGGC
570 GGCATT-GGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* *
19073569 TTGCGCATCCCGGTCCTCTCTGGCCGGCGTAGT---T----G--C-CCCGCCTGCTCGTTTTGTC
634 TTGCGCATCCC-GT-CTCTCTGGCC-GCGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTC
* * * * * ** * *
19073624 AGTTGGGTTAGGCATATGGTGTTCATTCCCAGTCT-AGTTTGGATCGAAT-GAGGGGTTGTTACA
696 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGA--GG--GTT---
* * * ** * * * *
19073687 GCAGGATCGGCAGCACACAGTGGGGGACTCGGCCAAT-CCCGGCTTGCGTATCCCGCCGCTTTGG
754 GCAGGAT----AGCACATAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * * * * *
19073751 CCGACTGAGCGCCCGCACGCTCATTTCGTGAGGGTTGACTTAGGCAAACGGAGTTCATTCCTAGT
815 CCGGCTGAGCGCCCGCACGCTCGTTTCAT--GGGTTGACTTAGGCATACGAAGTTCATTCCCAGT
19073816 CTAA
878 CTAA
* * *
19073820 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTT-CGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
19073884 CTCGGGCATGTTGCTAGTGCCGTATTTTTCTTCACTTGGGGGCACGATCACCGGAGCATTGTCGG
66 CTCGGGCATG-TGCTGGTGCCGCATTTTTCTTCGC--CGGGGCAC---CATC-G-GC----TCGG
* * * * *
19073949 AGAACTTGACCGGCGACATTGGGGTTCCGGCGATCAGGGGGGCCGGAGGGGGTGTGCACCACATG
119 AGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC-G-GGGGGTGTGC-GCACATG
*
19074014 ATGTGCCATCGTCGGTGCTGGTACTTGGCCC
180 ATGTGCGAT-G--GGTGCTGGTACTTGGCCC
19074045 NNNNNNNNNN
Statistics
Matches: 7870, Mismatches: 877, Indels: 801
0.82 0.09 0.08
Matches are distributed among these distances:
840 2 0.00
841 2 0.00
842 28 0.00
843 2 0.00
844 1 0.00
845 4 0.00
846 1 0.00
847 5 0.00
848 4 0.00
850 1 0.00
851 2 0.00
852 4 0.00
853 2 0.00
855 2 0.00
856 3 0.00
858 2 0.00
859 3 0.00
860 3 0.00
861 61 0.01
862 3 0.00
863 179 0.02
864 277 0.04
865 228 0.03
866 184 0.02
867 33 0.00
868 23 0.00
869 8 0.00
870 472 0.06
871 12 0.00
872 8 0.00
873 22 0.00
874 13 0.00
875 1 0.00
876 198 0.03
877 4 0.00
878 372 0.05
879 127 0.02
880 5 0.00
881 3 0.00
882 2 0.00
883 2 0.00
884 2 0.00
885 51 0.01
886 118 0.01
887 226 0.03
888 192 0.02
889 267 0.03
890 345 0.04
891 329 0.04
892 267 0.03
893 144 0.02
894 152 0.02
895 273 0.03
896 98 0.01
897 75 0.01
898 43 0.01
899 5 0.00
900 210 0.03
901 179 0.02
902 7 0.00
903 6 0.00
904 182 0.02
905 118 0.01
906 38 0.00
907 255 0.03
908 370 0.05
909 98 0.01
910 295 0.04
911 385 0.05
912 8 0.00
913 4 0.00
914 153 0.02
915 143 0.02
916 4 0.00
917 7 0.00
918 19 0.00
919 4 0.00
920 7 0.00
921 2 0.00
922 1 0.00
923 1 0.00
924 6 0.00
925 8 0.00
926 7 0.00
927 2 0.00
928 10 0.00
929 69 0.01
930 50 0.01
931 58 0.01
932 116 0.01
933 42 0.01
934 26 0.00
935 3 0.00
936 5 0.00
937 50 0.01
938 25 0.00
939 1 0.00
940 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (881 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGGCTCGGAGAACCTGACCG
ACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
TTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
CCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
CTGGCCGCGTAGTGCCTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
GTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGGTTGCAGGATAGCACATAGAGGGGGACCCG
ATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGG
GTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
Done.