Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167934.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_197, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52816

Tables:   1   2   

This is table  2  of  2  ( 156 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36120--36163
15
2.9
15
90
10
63
47
0
4
47
1.22
36545--36618
10
6.1
12
72
22
57
47
1
1
50
1.18
36581--36621
14
2.9
14
89
10
66
53
0
0
46
1.00
40630--40701
15
4.3
18
73
18
50
44
2
0
52
1.15
40662--40756
29
3.8
25
72
18
72
52
0
0
47
1.00
40645--40756
19
5.8
18
69
22
68
51
0
0
47
1.06
41136--41191
29
1.9
29
82
7
69
51
1
0
46
1.11
41341--41397
28
2.1
26
84
15
71
56
0
0
43
0.99
41355--41404
14
3.6
14
78
7
57
50
0
0
50
1.00
42174--42220
22
2.3
19
82
17
58
46
0
2
51
1.13
42311--42356
19
2.5
19
86
10
60
41
0
0
58
0.98
42345--42416
14
5.5
13
70
18
51
45
1
1
51
1.18
42436--42528
39
2.5
37
79
8
91
48
3
2
46
1.30
42473--42529
12
4.7
11
75
16
51
49
1
0
49
1.11
42473--42529
24
2.3
25
84
3
80
49
1
0
49
1.11
42473--42578
14
7.9
13
69
22
51
50
3
0
45
1.19
43975--44050
17
4.5
17
70
18
52
39
1
2
56
1.21
43978--44038
24
2.6
23
75
17
61
40
1
3
54
1.27
44556--45231
359
1.9
362
83
3
880
42
7
7
41
1.63
44421--45231
181
4.5
179
77
6
590
41
8
8
41
1.65
45691--45723
18
1.9
17
88
11
50
48
9
6
36
1.60
45310--46530
180
6.9
180
74
8
853
41
7
9
41
1.65
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46384--46683
159
1.9
159
83
6
394
40
7
8
43
1.63
46526--47031
181
2.8
180
79
7
487
38
8
9
43
1.69
47066--47705
181
3.5
182
78
4
645
37
10
9
42
1.72
49894--49975
22
3.7
23
71
27
63
41
2
2
53
1.27
50071--50120
21
2.4
21
75
15
59
38
2
2
58
1.21
50162--50198
15
2.3
17
81
13
51
51
0
0
48
1.00
50530--50598
24
2.8
26
72
18
74
49
2
1
46
1.25
51030--51098
24
2.7
26
74
21
72
49
1
0
49
1.09
51031--51098
25
2.6
26
73
19
70
48
1
0
50
1.10
51160--51229
25
2.8
24
80
8
68
47
0
2
50
1.16
51442--51485
23
1.9
22
82
17
54
43
2
6
47
1.42
51471--51526
27
2.1
27
83
9
71
50
1
0
48
1.11
51815--51851
3
13.0
3
83
11
51
27
0
2
70
1.01
52312--52391
24
3.2
24
78
15
90
41
2
3
52
1.33

Tables:   1   2

The End!