Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167935.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52463

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
852--895
23
1.9
23
85
0
61
29
22
22
25
1.99
910--969
23
2.7
23
71
7
61
33
25
13
28
1.93
1097--1164
22
3.0
23
76
6
68
29
17
19
33
1.95
2317--2471
35
4.4
35
73
9
102
15
20
14
50
1.78
2264--2471
70
3.0
69
70
8
177
15
20
14
49
1.79
2230--2502
140
2.0
139
80
2
305
16
21
13
48
1.80
2668--2733
6
10.7
6
76
15
64
78
18
0
3
0.87
2678--2721
14
3.1
14
84
9
54
77
18
0
4
0.94
5181--5209
10
3.0
10
95
5
51
68
0
0
31
0.89
6274--6318
21
2.2
19
88
11
63
77
2
0
20
0.87
7181--7213
2
16.5
2
100
0
66
48
0
0
51
1.00
7513--7570
17
3.2
18
73
17
57
58
0
0
41
0.98
7517--7570
18
2.8
20
68
21
53
57
0
0
42
0.98
9145--9176
2
17.0
2
87
12
50
53
0
0
46
1.00
14314--14351
3
12.7
3
100
0
76
68
0
0
31
0.90
20869--20930
26
2.4
26
86
0
88
38
16
14
30
1.88
21531--21623
23
4.1
23
76
6
75
27
17
20
34
1.95
21902--21946
22
2.0
22
82
0
54
28
20
20
31
1.97
21822--22165
126
2.8
124
81
4
388
36
14
15
33
1.88
22017--22065
22
2.2
22
85
0
62
38
22
12
26
1.89
22152--22215
22
2.9
22
74
4
67
32
26
12
28
1.93
23055--23096
22
2.0
22
85
4
59
76
0
9
14
1.02
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
24163--24228
22
3.0
22
68
18
55
72
1
22
3
1.06
24188--24240
25
2.0
27
85
7
74
77
1
18
1
0.96
28053--28148
19
5.1
19
70
5
77
16
3
36
43
1.64
29245--29672
56
7.6
55
79
10
320
36
9
5
49
1.57
29249--29668
109
3.7
110
78
12
342
36
9
4
49
1.56
30811--30894
46
1.9
42
81
13
98
69
4
4
21
1.26
31563--31806
32
7.1
32
69
17
100
38
9
19
32
1.84
31660--31748
34
2.7
34
84
6
112
42
6
17
32
1.76
31674--31843
37
4.7
36
76
12
141
37
9
18
34
1.84
31674--31845
74
2.4
71
86
5
229
36
9
19
34
1.84
32845--32895
21
2.4
21
84
12
61
5
17
0
76
0.98
32857--32897
21
1.9
22
95
5
75
7
12
0
80
0.90
32859--32902
11
4.0
11
79
8
54
9
11
0
79
0.93
38076--38500
57
7.6
54
75
16
291
34
8
5
51
1.55
38303--38535
114
2.1
112
80
8
258
35
6
6
51
1.55
39661--39721
3
20.3
3
100
0
122
34
0
32
32
1.58
39720--39749
3
10.0
3
92
0
51
66
3
0
30
1.07
42802--42855
18
2.9
18
82
15
65
51
3
3
40
1.37
42793--42902
21
5.5
20
75
14
86
49
9
4
37
1.55
42793--42888
39
2.4
41
83
11
110
48
7
4
39
1.50
44078--44144
6
11.0
6
82
3
80
65
8
0
25
1.21
44066--44142
12
6.3
12
83
8
93
67
11
0
20
1.22
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
44549--44590
17
2.4
17
88
4
57
42
9
14
33
1.78
44595--44665
35
2.1
34
86
2
97
42
7
12
38
1.70
44549--44679
18
7.5
17
73
12
77
42
8
12
36
1.73
44982--45032
17
2.9
17
82
2
57
52
7
7
31
1.59
46480--46518
21
1.9
21
89
5
62
10
7
7
74
1.22
51393--51478
21
4.2
20
81
12
95
51
9
4
34
1.55
51629--51665
19
1.9
19
94
0
65
75
13
2
8
1.13
51632--51679
25
1.9
25
86
0
69
79
10
2
8
1.02
51617--51680
25
2.9
21
75
18
67
81
9
1
7
0.94

Tables:   1

The End!