Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35885061
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Warning! 165000 characters in sequence are not A, C, G, or T
File 105 of 195
Found at i:18661007 original size:35 final size:34
Alignment explanation
Indices: 18660962--18661046 Score: 93
Period size: 35 Copynumber: 2.4 Consensus size: 34
18660952 CAGATAATAC
*
18660962 AATAAGATAAATAAAAACAATATTACA-AGAAAAAT
1 AATAA-ATAAATAAAAAAAATA-TACATAGAAAAAT
* *
18660997 GAATAAATAAATAAATAAAAATATACATATAATAAT
1 -AATAAATAAATAAA-AAAAATATACATAGAAAAAT
18661033 AATAAAT-AATAAAA
1 AATAAATAAATAAAA
18661047 TACATAAAAT
Statistics
Matches: 44, Mismatches: 3, Indels: 7
0.81 0.06 0.13
Matches are distributed among these distances:
33 1 0.02
34 6 0.14
35 20 0.45
36 17 0.39
ACGTcount: A:0.69, C:0.04, G:0.04, T:0.24
Consensus pattern (34 bp):
AATAAATAAATAAAAAAAATATACATAGAAAAAT
Found at i:18661037 original size:27 final size:27
Alignment explanation
Indices: 18661006--18661057 Score: 79
Period size: 27 Copynumber: 1.9 Consensus size: 27
18660996 TGAATAAATA
*
18661006 AATAAATAA-AAATATACATATAATAAT
1 AATAAATAATAAA-ATACATAAAATAAT
18661033 AATAAATAATAAAATACATAAAATA
1 AATAAATAATAAAATACATAAAATA
18661058 CAAAAGAAAG
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
27 20 0.87
28 3 0.13
ACGTcount: A:0.69, C:0.04, G:0.00, T:0.27
Consensus pattern (27 bp):
AATAAATAATAAAATACATAAAATAAT
Found at i:18661270 original size:1 final size:1
Alignment explanation
Indices: 18661259--18661322 Score: 65
Period size: 1 Copynumber: 64.0 Consensus size: 1
18661249 AACACTGTCA
* * * * * * *
18661259 TTTTTTGTTTTTTTTTTGTTTTTTGTATTTTTTTTTGTTTTTTGTTTTTTTGTTTTTTTTTTTT
1 TTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT
18661323 ACCAAAGCTC
Statistics
Matches: 49, Mismatches: 14, Indels: 0
0.78 0.22 0.00
Matches are distributed among these distances:
1 49 1.00
ACGTcount: A:0.02, C:0.00, G:0.09, T:0.89
Consensus pattern (1 bp):
T
Found at i:18661299 original size:27 final size:26
Alignment explanation
Indices: 18661260--18661322 Score: 94
Period size: 26 Copynumber: 2.4 Consensus size: 26
18661250 ACACTGTCAT
18661260 TTTTTGTTTTTTTTTTG-TTTTTTGTA
1 TTTTT-TTTTTTTTTTGTTTTTTTGTA
18661286 TTTTTTTTTGTTTTTTGTTTTTTTGT-
1 TTTTTTTTT-TTTTTTGTTTTTTTGTA
18661312 TTTTTTTTTTT
1 TTTTTTTTTTT
18661323 ACCAAAGCTC
Statistics
Matches: 35, Mismatches: 0, Indels: 5
0.88 0.00 0.12
Matches are distributed among these distances:
25 6 0.17
26 21 0.60
27 8 0.23
ACGTcount: A:0.02, C:0.00, G:0.10, T:0.89
Consensus pattern (26 bp):
TTTTTTTTTTTTTTTGTTTTTTTGTA
Found at i:18661320 original size:19 final size:18
Alignment explanation
Indices: 18661259--18661319 Score: 97
Period size: 19 Copynumber: 3.3 Consensus size: 18
18661249 AACACTGTCA
18661259 TTTTTTGTTTTTTTTTTG
1 TTTTTTGTTTTTTTTTTG
18661277 TTTTTTGTATTTTTTTTTG
1 TTTTTTGT-TTTTTTTTTG
18661296 TTTTTTGTTTTTTTGTTT-
1 TTTTTTGTTTTTTT-TTTG
18661314 TTTTTT
1 TTTTTT
18661320 TTTACCAAAG
Statistics
Matches: 41, Mismatches: 0, Indels: 4
0.91 0.00 0.09
Matches are distributed among these distances:
18 20 0.49
19 21 0.51
ACGTcount: A:0.02, C:0.00, G:0.10, T:0.89
Consensus pattern (18 bp):
TTTTTTGTTTTTTTTTTG
Found at i:18661420 original size:41 final size:42
Alignment explanation
Indices: 18661329--18661501 Score: 244
Period size: 41 Copynumber: 4.1 Consensus size: 42
18661319 TTTTACCAAA
* * *
18661329 GCTCCTCTAAACAGAGGCTCAACGAC-TTTGAGAAACATAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTTGA-AAA-GTAAATT
* * *
18661372 GCCCCTCTAAATAGAGGCACCACGGCTTTTGAAAA-TAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTTGAAAAGTAAATT
18661413 GCTCCTCTAAACAGAGGCACCACGAC-TTTGAAAAGTAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTTGAAAAGTAAATT
*
18661454 GCTCCTCTAAACAGAGGCACCACGACTTTGGAAAAGTAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTTGAAAAGTAAATT
18661496 GCTCCT
1 GCTCCT
18661502 TAACAATCAT
Statistics
Matches: 118, Mismatches: 9, Indels: 7
0.88 0.07 0.05
Matches are distributed among these distances:
40 8 0.07
41 61 0.52
42 20 0.17
43 24 0.20
44 5 0.04
ACGTcount: A:0.35, C:0.25, G:0.17, T:0.23
Consensus pattern (42 bp):
GCTCCTCTAAACAGAGGCACCACGACTTTTGAAAAGTAAATT
Found at i:18661993 original size:31 final size:30
Alignment explanation
Indices: 18661948--18662011 Score: 110
Period size: 31 Copynumber: 2.1 Consensus size: 30
18661938 AATCGATCAT
*
18661948 CACTTGACCATCATTTAATGAATTTCTCAG
1 CACTAGACCATCATTTAATGAATTTCTCAG
18661978 CACTAGACCAGTCATTTAATGAATTTCTCAG
1 CACTAGACCA-TCATTTAATGAATTTCTCAG
18662009 CAC
1 CAC
18662012 AAGCAAATTT
Statistics
Matches: 32, Mismatches: 1, Indels: 1
0.94 0.03 0.03
Matches are distributed among these distances:
30 9 0.28
31 23 0.72
ACGTcount: A:0.31, C:0.25, G:0.11, T:0.33
Consensus pattern (30 bp):
CACTAGACCATCATTTAATGAATTTCTCAG
Found at i:18662756 original size:22 final size:22
Alignment explanation
Indices: 18662728--18662792 Score: 71
Period size: 24 Copynumber: 2.9 Consensus size: 22
18662718 TTTGAATCTC
18662728 TTTTTTTCATTTTCTCAT-TTCT
1 TTTTTTTCATTTTCTCATCTT-T
*
18662750 TTTTTTTCTTTTTTCATCATCTTT
1 TTTTTTTC-ATTTTC-TCATCTTT
18662774 TTTTTTCTCATTTT-TCATC
1 TTTTTT-TCATTTTCTCATC
18662793 CATTGTTGAT
Statistics
Matches: 37, Mismatches: 2, Indels: 8
0.79 0.04 0.17
Matches are distributed among these distances:
22 13 0.35
23 5 0.14
24 15 0.41
25 4 0.11
ACGTcount: A:0.09, C:0.18, G:0.00, T:0.72
Consensus pattern (22 bp):
TTTTTTTCATTTTCTCATCTTT
Found at i:18662763 original size:23 final size:23
Alignment explanation
Indices: 18662723--18662792 Score: 72
Period size: 23 Copynumber: 3.0 Consensus size: 23
18662713 TTCAATTTGA
*
18662723 ATCTCTTTTTTTC-ATTTTC-TC
1 ATCTTTTTTTTTCTATTTTCATC
* *
18662744 ATTTCTTTTTTTTCTTTTTTCATC
1 ATCT-TTTTTTTTCTATTTTCATC
18662768 ATCTTTTTTTTTCTCATTTTTCATC
1 ATCTTTTTTTTTCT-A-TTTTCATC
18662793 CATTGTTGAT
Statistics
Matches: 39, Mismatches: 5, Indels: 6
0.78 0.10 0.12
Matches are distributed among these distances:
21 3 0.08
22 8 0.21
23 15 0.38
24 5 0.13
25 8 0.21
ACGTcount: A:0.10, C:0.20, G:0.00, T:0.70
Consensus pattern (23 bp):
ATCTTTTTTTTTCTATTTTCATC
Found at i:18662777 original size:25 final size:23
Alignment explanation
Indices: 18662728--18662792 Score: 71
Period size: 25 Copynumber: 2.7 Consensus size: 23
18662718 TTTGAATCTC
*
18662728 TTTTTTTCATTTTC-TCATTTCT
1 TTTTTTTCTTTTTCATCATTTCT
18662750 TTTTTTTCTTTTTTCATCATCTT-T
1 TTTTTTTC-TTTTTCATCAT-TTCT
18662774 TTTTTTCTCATTTTTCATC
1 TTTTTT-TC-TTTTTCATC
18662793 CATTGTTGAT
Statistics
Matches: 37, Mismatches: 2, Indels: 5
0.84 0.05 0.11
Matches are distributed among these distances:
22 8 0.22
23 5 0.14
24 11 0.30
25 13 0.35
ACGTcount: A:0.09, C:0.18, G:0.00, T:0.72
Consensus pattern (23 bp):
TTTTTTTCTTTTTCATCATTTCT
Found at i:18665531 original size:15 final size:16
Alignment explanation
Indices: 18665511--18665542 Score: 57
Period size: 15 Copynumber: 2.1 Consensus size: 16
18665501 TGTTAAGTGT
18665511 AATGAATGAG-AATGC
1 AATGAATGAGAAATGC
18665526 AATGAATGAGAAATGC
1 AATGAATGAGAAATGC
18665542 A
1 A
18665543 TGTATGCAAA
Statistics
Matches: 16, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
15 10 0.62
16 6 0.38
ACGTcount: A:0.50, C:0.06, G:0.25, T:0.19
Consensus pattern (16 bp):
AATGAATGAGAAATGC
Found at i:18668822 original size:17 final size:15
Alignment explanation
Indices: 18668797--18668868 Score: 63
Period size: 17 Copynumber: 4.3 Consensus size: 15
18668787 ATTTTTTATT
*
18668797 TAAAGAAAACAGAATAA
1 TAAA-AAAAAAGAA-AA
*
18668814 TAAAAAAAAATAAAAA
1 TAAAAAAAAA-GAAAA
18668830 TAAAAAAAAAAGAAAA
1 T-AAAAAAAAAGAAAA
18668846 GTAAAACAAAAATGAAAA
1 -TAAAA-AAAAA-GAAAA
18668864 TAAAA
1 TAAAA
18668869 TAAAGATAAA
Statistics
Matches: 47, Mismatches: 3, Indels: 10
0.78 0.05 0.17
Matches are distributed among these distances:
16 16 0.34
17 26 0.55
18 5 0.11
ACGTcount: A:0.79, C:0.03, G:0.07, T:0.11
Consensus pattern (15 bp):
TAAAAAAAAAGAAAA
Found at i:18668830 original size:6 final size:6
Alignment explanation
Indices: 18668809--18668880 Score: 60
Period size: 6 Copynumber: 12.3 Consensus size: 6
18668799 AAGAAAACAG
* * * *
18668809 AATAATA AAAAAA AATAAA AATAAA AA-AAA AAGAAA AGT-AA AACAAA
1 AATAA-A AATAAA AATAAA AATAAA AATAAA AATAAA AATAAA AATAAA
* *
18668856 AATGAA AAT-AA AATAAA GATAAA AA
1 AATAAA AATAAA AATAAA AATAAA AA
18668881 GAATATTAAA
Statistics
Matches: 52, Mismatches: 10, Indels: 7
0.75 0.14 0.10
Matches are distributed among these distances:
5 13 0.25
6 35 0.67
7 4 0.08
ACGTcount: A:0.81, C:0.01, G:0.06, T:0.12
Consensus pattern (6 bp):
AATAAA
Found at i:18668834 original size:11 final size:11
Alignment explanation
Indices: 18668812--18668879 Score: 68
Period size: 11 Copynumber: 6.2 Consensus size: 11
18668802 AAAACAGAAT
18668812 AATAAAAA-AA
1 AATAAAAATAA
18668822 AATAAAAATAA
1 AATAAAAATAA
* *
18668833 AAAAAAAAGAA
1 AATAAAAATAA
18668844 AAGTAAAACA-AA
1 AA-TAAAA-ATAA
*
18668856 AATGAAAATAA
1 AATAAAAATAA
*
18668867 AATAAAGATAA
1 AATAAAAATAA
18668878 AA
1 AA
18668880 AGAATATTAA
Statistics
Matches: 48, Mismatches: 6, Indels: 7
0.79 0.10 0.11
Matches are distributed among these distances:
10 9 0.19
11 30 0.62
12 8 0.17
13 1 0.02
ACGTcount: A:0.81, C:0.01, G:0.06, T:0.12
Consensus pattern (11 bp):
AATAAAAATAA
Found at i:18668880 original size:17 final size:16
Alignment explanation
Indices: 18668812--18668880 Score: 77
Period size: 17 Copynumber: 4.1 Consensus size: 16
18668802 AAAACAGAAT
18668812 AATAAAAAAAAATAAA
1 AATAAAAAAAAATAAA
18668828 AATAAAAAAAAA-AGAA
1 AATAAAAAAAAATA-AA
*
18668844 AAGTAAAACAAAAATGAA
1 AA-TAAAA-AAAAATAAA
*
18668862 AATAAAATAAAGATAAA
1 AATAAAA-AAAAATAAA
18668879 AA
1 AA
18668881 GAATATTAAA
Statistics
Matches: 45, Mismatches: 4, Indels: 7
0.80 0.07 0.12
Matches are distributed among these distances:
15 1 0.02
16 16 0.36
17 19 0.42
18 9 0.20
ACGTcount: A:0.81, C:0.01, G:0.06, T:0.12
Consensus pattern (16 bp):
AATAAAAAAAAATAAA
Found at i:18671215 original size:59 final size:59
Alignment explanation
Indices: 18671087--18671247 Score: 245
Period size: 59 Copynumber: 2.7 Consensus size: 59
18671077 TCTTGTGTAG
** *
18671087 GGAAAATTGATACTTTCAACTTTTCCTCAAAAACCCCTTTTTTTGAAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCTCAAAAA-TACTTTTTTTGAAAACTTATTTTTAA
**
18671147 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATACTTTTTTTTTAAACTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATACTTTTTTTGAAAACTTATTTTTAA
18671206 GGAAAATTGATACTTTCAACTTTTTCCT-AAAAATA-TTTTTTT
1 GGAAAATTGATACTTTCAAC-TTTTCCTCAAAAATACTTTTTTT
18671248 CTGGAAATTT
Statistics
Matches: 95, Mismatches: 5, Indels: 4
0.91 0.05 0.04
Matches are distributed among these distances:
58 7 0.07
59 48 0.51
60 40 0.42
ACGTcount: A:0.34, C:0.14, G:0.06, T:0.46
Consensus pattern (59 bp):
GGAAAATTGATACTTTCAACTTTTCCTCAAAAATACTTTTTTTGAAAACTTATTTTTAA
Found at i:18671321 original size:17 final size:17
Alignment explanation
Indices: 18671298--18671339 Score: 59
Period size: 17 Copynumber: 2.5 Consensus size: 17
18671288 AAAAAAAAAT
18671298 AAATAAAA-AAAAAGGA
1 AAATAAAACAAAAAGGA
*
18671314 AAAGTAAAACAAAAATGA
1 AAA-TAAAACAAAAAGGA
18671332 AAATAAAA
1 AAATAAAA
18671340 TAAAGATAAA
Statistics
Matches: 23, Mismatches: 1, Indels: 3
0.85 0.04 0.11
Matches are distributed among these distances:
16 3 0.13
17 10 0.43
18 10 0.43
ACGTcount: A:0.79, C:0.02, G:0.10, T:0.10
Consensus pattern (17 bp):
AAATAAAACAAAAAGGA
Found at i:18671343 original size:22 final size:22
Alignment explanation
Indices: 18671288--18671365 Score: 54
Period size: 22 Copynumber: 3.6 Consensus size: 22
18671278 ACAGAATAAT
* *
18671288 AAAAAAAAATAAATA-AAAAA-
1 AAAATAAAATAAAGACAAAAAG
**
18671308 AAAGGAAAAGTAAA-ACAAAAATG
1 AAAATAAAA-TAAAGACAAAAA-G
*
18671331 AAAATAAAATAAAGATAAAAAG
1 AAAATAAAATAAAGACAAAAAG
* *
18671353 AATATTAAATAAA
1 AAAATAAAATAAA
18671366 CCTAATGTAA
Statistics
Matches: 46, Mismatches: 7, Indels: 8
0.75 0.11 0.13
Matches are distributed among these distances:
20 8 0.17
21 9 0.20
22 16 0.35
23 13 0.28
ACGTcount: A:0.77, C:0.01, G:0.08, T:0.14
Consensus pattern (22 bp):
AAAATAAAATAAAGACAAAAAG
Found at i:18671351 original size:17 final size:16
Alignment explanation
Indices: 18671285--18671351 Score: 57
Period size: 17 Copynumber: 4.1 Consensus size: 16
18671275 AAAACAGAAT
18671285 AATAAAAAAAAAT--A
1 AATAAAAAAAAATAAA
*
18671299 AATAAAAAAAAAGGAAA
1 AATAAAAAAAAA-TAAA
* *
18671316 AGTAAAACAAAAATGAA
1 AATAAAA-AAAAATAAA
*
18671333 AATAAAATAAAGATAAA
1 AATAAAA-AAAAATAAA
18671350 AA
1 AA
18671352 GAATATTAAA
Statistics
Matches: 41, Mismatches: 8, Indels: 5
0.76 0.15 0.09
Matches are distributed among these distances:
14 12 0.29
17 24 0.59
18 5 0.12
ACGTcount: A:0.79, C:0.01, G:0.07, T:0.12
Consensus pattern (16 bp):
AATAAAAAAAAATAAA
Found at i:18672368 original size:29 final size:31
Alignment explanation
Indices: 18672329--18672407 Score: 94
Period size: 30 Copynumber: 2.6 Consensus size: 31
18672319 CAGATAATAC
18672329 AATAAGATAAATAAAAAAAATATTACA-A-AA-
1 AATAA-ATAAATAAAAAAAAT-TTACATATAAT
18672359 AATAAATAAATAAATAAAAATTTACATATAAT
1 AATAAATAAATAAA-AAAAATTTACATATAAT
*
18672391 AAT-AATAAATAATAAAA
1 AATAAATAAATAAAAAAA
18672408 TACATAAAAT
Statistics
Matches: 44, Mismatches: 1, Indels: 8
0.83 0.02 0.15
Matches are distributed among these distances:
29 14 0.32
30 16 0.36
31 11 0.25
32 3 0.07
ACGTcount: A:0.71, C:0.03, G:0.01, T:0.25
Consensus pattern (31 bp):
AATAAATAAATAAAAAAAATTTACATATAAT
Found at i:18672377 original size:33 final size:37
Alignment explanation
Indices: 18672304--18672378 Score: 104
Period size: 33 Copynumber: 2.1 Consensus size: 37
18672294 AACAAGAGAG
* *
18672304 AAAAAAAATTATTAACAGATAATACAATAAGATAAAT
1 AAAAAAAATTATTAACAAAAAATACAATAAGATAAAT
18672341 AAAAAAAA-TATT-ACAAAAAATA-AATAA-ATAAAT
1 AAAAAAAATTATTAACAAAAAATACAATAAGATAAAT
18672374 AAAAA
1 AAAAA
18672379 TTTACATATA
Statistics
Matches: 36, Mismatches: 2, Indels: 4
0.86 0.05 0.10
Matches are distributed among these distances:
33 11 0.31
34 5 0.14
35 8 0.22
36 4 0.11
37 8 0.22
ACGTcount: A:0.72, C:0.04, G:0.03, T:0.21
Consensus pattern (37 bp):
AAAAAAAATTATTAACAAAAAATACAATAAGATAAAT
Found at i:18672411 original size:27 final size:27
Alignment explanation
Indices: 18672338--18672418 Score: 85
Period size: 27 Copynumber: 2.9 Consensus size: 27
18672328 CAATAAGATA
*
18672338 AATAAA-AAAAATATTACAAAAAATAAAT
1 AATAAATAAAAATA-TACATAAAAT-AAT
* *
18672366 AAATAAATAAAAATTTACATATAATAAT
1 -AATAAATAAAAATATACATAAAATAAT
18672394 AATAAATAATAAA-ATACATAAAATA
1 AATAAATAA-AAATATACATAAAATA
18672419 CAAAAGAAAA
Statistics
Matches: 45, Mismatches: 5, Indels: 6
0.80 0.09 0.11
Matches are distributed among these distances:
27 19 0.42
28 6 0.13
29 14 0.31
30 6 0.13
ACGTcount: A:0.70, C:0.04, G:0.00, T:0.26
Consensus pattern (27 bp):
AATAAATAAAAATATACATAAAATAAT
Found at i:18672993 original size:26 final size:26
Alignment explanation
Indices: 18672964--18673016 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18672954 CTAATCCGAT
*
18672964 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCCTATG
*
18672990 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGAGAATGAACTCCCTATG
18673016 C
1 C
18673017 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCCTATG
Found at i:18677257 original size:26 final size:26
Alignment explanation
Indices: 18677228--18677280 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
18677218 CTGATCCAAT
18677228 CTTAGA-TCGGGAATGAACTCCATATG
1 CTTAGACT-GGGAATGAACTCCATATG
*
18677254 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
18677280 C
1 C
18677281 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18678231 original size:900 final size:896
Alignment explanation
Indices: 18672990--18698590 Score: 19981
Period size: 890 Copynumber: 28.4 Consensus size: 896
18672980 ACTCCGTATG
* * * * * *
18672990 CTTAGACTGGGAATGAACTCCCTATGCCTAAGCCAACCGACGAAACGAACGGGCGGACGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * *
18673055 CACCACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTCGATCGAGAGGGT-GTAGGT-GGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
18673118 GCACATCTTCATATTTCTGCATGTCAATGCCATTTTTATGGCTTGTAACTTCATACAATGGTCTC
131 GCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * *
18673183 TTAAACCTTCACGTGAAGTTTCATGGCAAGATGACCCGTTTTCTGTTTTTCATGATTTTTGAAAC
195 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * *
18673248 TTTTTGCTGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGTCCCAAACTTGGTAGACG
260 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* *
18673313 TGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
324 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
18673378 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * *
18673443 AAAATCTCAAATGCTTTTTAAGGGGGTCTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * * * * **
18673508 ATAAGAGCCAAGTACCAGAACCCATCGTACATCGTGTGTGCACACCCCCCGGCCCCCCCGATCAT
519 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCGC
* * * * * * * *
18673573 CGGAACCTCAATGCCGCCGGTCAAGTTCTGCTG-TGATGCTCAGATGATGGTGCCCCAACGAAGA
584 CGGAACCCCAATGCCGTCGGTCAGGTTCT-CCGACGATGCTCCGACGATGGTGCCCCGACGAAGA
* ** * *
18673637 AAAATACGGCACCAGCACATGCTTGAGCCCAGCAAGTGCTGCCGTAA-CC-C--TC-G----G--
648 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGAT
* **
18673691 -TT--A----G---G---TCCG-AT-CATAGACTGGGAATGAACTCTATATGCCTAAGTCAACCC
713 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * * * *** * * * *
18673741 ATGAAATGAGCGAGCGGGTGCTCAGTCGGCTGGAGGGGCAGGATACGTAAGCCGGGGATCG-GCT
778 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATC-
* * * * *
18673805 GGGTCACCCTCTGCGTGGTGTCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGAT
842 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * *
18673861 CTTAGACTGGGAATGAACT-CGATATGCCTAATCCAACCGATGAAACAAGCGGGCGGGTGGGCGG
1 CTTAGACTGGGAATGAACTCCG-TATGCCTAAGCCAAACGATGAAACGAGCGGGC----GGGCGG
* * * * * * *
18673925 GCGGGTACTATGCCGGCCA-AGAGATGAGATGTGCAAGCCGTGAATCGATAGGGTGGTAGGTGGG
61 GCGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* ** *
18673989 TTTAGGCACATCTTCATATTTATGTGTGCCAATGCCATTTTTATGCCTTGTAAATTCATACAATG
126 TTTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
18674054 GTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
190 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * *
18674119 -AAA-TTTTTACGGTTTGGGATTTTCTAAAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGT
255 GAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
18674182 AGTCGTGATCCTTGTATTTTTGTTGGCGTACACAAAAAAATTCAGCTAAAAACCCGAAGTGTCCA
319 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
18674247 AGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAA
384 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
18674311 CCTGTAAAATCTCAAATGCTTTTTAAGGGGGTCTGAGTTCTCGAGGTTTGATGAGGGATAAGGGG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * * * *
18674376 CCAATATAAGAGCCAAGTACCAGAACCCATCGTACATCGTGTGTGCACACCCCCCGGCCCCCCCG
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCG
** * * * * * * * *
18674441 ATCATCGGAACCTCAATGCCGCCGGTCAAGTTCTGCTG-TGATGCTCAGATGATGGTGCCCCAAC
579 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT-CCGACGATGCTCCGACGATGGTGCCCCGAC
* * * *
18674505 GAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCAAGTGCTGCCGTAA-CC-C--TC-G--
643 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGAT
* * **
18674563 --G---TT--A----G---G---TCCG-AT-CATAGACTGAGAATGAACTCTATATGCCTAAGTC
708 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * *** * * *
18674609 AACCCATGAAATGAGCGAGCGGGTGCTCAGTCGGCTGGAGGGGCAGGATACGTAAGCCGGGGATC
773 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATC
* * * * * *
18674674 G-GCTGGGTCACCCTCTGCGTGGTGTCGATCCTGCTGCCGCAACCCTCAGTCCGGTCTGAT
838 GATC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * *
18674734 CTTAGACTGGGAATGAACT-CGATATGCCTAATCCAACCGATGAAACAAGCGGGCGGGTGGGCGG
1 CTTAGACTGGGAATGAACTCCG-TATGCCTAAGCCAAACGATGAAACGAGCGGGC----GGGCGG
* * * * * * *
18674798 GCGGGTACTATGCCGGCCA-AGAGATGAGATGTGCAAGCCCGTGAATCGATAGGGTGGTAGGTGG
61 GCGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG-CCGTGGATCGATAGGGTGGTAGGTGG
* ** *
18674862 GTTTAGGCACATCTTCATATTTATGTGTGCCAATGCCATTTTTATGCCTTGTAAATTCATACAAT
125 GTTTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
18674927 GGTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
189 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* * * * *
18674992 T-AAA-TTTTTACGGTTTGGGATTTTCTAAAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGG
254 TGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
18675055 TAGTCGTGATCCTTGTATTTTTGTTGGCGTACACAAAAAAATTCAGCTAAAAACCCGAAGTGT-C
318 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
18675119 TAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCA
383 -AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
18675183 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAGTTCTCAAGGTTTAATGAGGGATAGGG
447 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
18675248 GGCCAATATAAGGGCCAAGTACCTGCACCCATCGCACATCATGTGCGCAAACCCCCCCGGCACCC
512 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCACCC
* * *
18675313 CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGATGATGGTGCCCCG
576 CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
** * * **
18675378 ACGAAGAAAAATATGGCACCAGCACATGCTCGAGCCCAGCTTGTGCTGTTGCAACCCTCGGTCTG
641 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG
* * **
18675443 ATCCGATATTAGA-TCGGGAATGAACTCCATATGCTTAGACTAAGAATGAACTCC-TATGCCTAA
706 ATCCGATCTTAGACT-GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * *
18675506 GTCAACCCACGAAACGAGCGTACGAGCGTTCAGCCGACCAAAGGGGCGGGATGCGCAAGCCAGGG
770 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGG
* * * * *
18675571 ATCGACCGGGT-CCCCTCTGCGTGCTTCCGATCCTGCTGCCGCAACCGTCGATCCGGTCCAAT
835 ATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCG-TTCGGTCCGAT
* * * *
18675633 CTTAGACTTGGAATTAACTCCGTATGCCTAAGCCAAATGATGAAACGAGCGGGCGGGTGGGCGGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGC-GA
* * * *
18675698 CGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCTGGGGATCGATAGGGTGGCAGGTGGGT
65 ---GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
18675763 TTAGGCACATCTTCATATTTCTCCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
18675828 TCCCTTAAGTCTTCACGTGAAGTTTTATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTC
191 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* *
18675892 AAA-TTTTTACGGTTCGGGATTTTTTAAAATTTTCTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
256 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT-TTGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * *
18675956 GGCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACCCGAAGTGTATAA
320 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
18676021 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACATTAATGGCTACTGGCAGCAAAC
385 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
18676086 CTGTAAAATCTCCAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
450 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * *
18676151 CAATATAAGGGCCAAGTACCAGCACCTATCGTACATCATGTGCGCACACCCCCCGGCACCCACGA
515 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGA
* * * **
18676216 TCACGGGATCCCCAATGCCGTCGGTCAGG-T-T----C--T-CT--GACGATGGTGCCCCGGTGA
580 TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA
* ** *
18676270 AGACAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTTGGAACCCTCGGTCTGATCC
645 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
* * * *
18676335 AATCTTAGA-TCAGGAATGAACTCCATATGCTAAGACTGGGAATGAACTCCGTATGCCTAAGTCA
710 GATCTTAGACT-GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * *
18676399 ACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCAGGATGCACAAGCCGGGGATCG
774 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCG
* ** * * * * * * *
18676464 ACCGGGTCCTTCTTTGCGTGTTGCTGATCCTACTGCTGTAACCCTCAGTTCGGTCCAAT
839 ATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
*
18676523 CTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGA----GCGGGCGGGCGGG
* * * *
18676588 CGGGCACTACGTC-GCCAGAGAGACGTGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
18676652 TTAGGCACATCTTCATATTTCCCCAAGCCAATGCCATTTTAATGGCTTGTAAATTCATGCAATGG
127 TTAGGCACATCTTCATATTT-CTCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* **
18676717 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
191 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * **
18676782 AAACTTTTTACGGTTCGGGATTTTTTAAAATTATTTCGGAAGGAGCTTTCTCCCCAAACTTGGTA
256 AAACTTTTTGCGGTTCGGGATTTTTTAAAATT-TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
18676847 GACGTGATCCTTCTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCAAAGTGTACAA
320 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
18676912 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCTGACACTTTAATTGCTACTGGCAGCAAAC
385 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
18676977 CTGTAAAATCTC-AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
450 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * *
18677041 CAATATAAGGGCCAAGTACCAGCACCTATCGTACATCATGTGCGCACACCCCCCGGCACCCACGA
515 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGA
* * * **
18677106 TCACGGGATCCCCAATGCCGTCGGTCAGG-T-T----C--T-CT--GACGATGGTGCCCCGGTGA
580 TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA
* ** *
18677160 AGACAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTTGGAACCCTCGGTCTGATCC
645 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
* *
18677225 AATCTTAGA-TCGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
710 GATCTTAGACT-GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * *
18677289 ACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAAAGGGACGGGATGCACAAGTCGGGGATCG
774 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCG
**** * * * *
18677354 ATCGGGTCCCCCTCTGCGTGCTGTTTTTCCTGCTACCACAACCCTCAGTTCAGTCCAAT
839 ATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* *
18677413 CTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACAAGCGGGCGGGCGGGCGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * *
18677478 CACTACGCCGGCTAGAGAGACGGGATGCGCAAGCTGTGGATCGATAAGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
18677543 GCACATGTTCATATTTCTCTATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAGTGGTCCC
131 GCACATCTTCATATTTCTC-ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
*
18677608 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAGTTTTGAAAC
195 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * * *
18677673 TTTTTGTGCTTCAGTATTTTTTTAAAATTTTTGTGGAAGGTGTTTTGGCCCCAAACTTGGTAGAC
260 TTTTTGCGGTTCGGGA-TTTTTTAAAATTTTT-TGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * *
18677738 GTGATCCTTGTATTTTGGTTGGCGTACACAAAAAAATTCAGCTAAAAACTCGAAGTGTCCAAGAT
323 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* *
18677803 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATAGCTACTGGCAGCAAACCTG
388 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
18677868 TAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
453 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
18677933 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCG
518 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCG
** ** *
18677998 TTGGAACCCCAATGCCGTCGGTCAGGTTCTCTAACGATGCTCCGACGATGGTGCCTCGACGAAGA
583 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGA
* *
18678063 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCTGATCTGAT
648 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGAT
* *
18678128 CTTAGA-TCAGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
713 CTTAGACT-GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * *
18678192 CACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAAAGGGACGGGATGCACAAGTCGGGGATCGATC
777 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATC
* * * * *
18678257 GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCACAACCCTCAGTTCAGTCCAAT
842 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* *
18678313 CTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACAAGCGGGCGGGCGGGCGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* *
18678378 CACTACGCCGGCTAGAGAGACGGGATGCGCAAGCTGTGGATCGATA-GGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
18678442 GCACATGTTCATATTTCTCTATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAGTGGTCCC
131 GCACATCTTCATATTTCTC-ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
**
18678507 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC
195 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
** * * * *
18678572 TTTTTGCGGTTCATGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGTCCAAAACTTGGTAGATG
260 TTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
** *
18678637 TGATCCTTGTATTTTTGTTGGTGTGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
324 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * * *
18678702 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCAATTGGTAACAAACCTAT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * *
18678767 AAAATCTCAAATGCTCTTGAAGAGGGTATGAGTTCTCGAGGTTTGATGAAGGATAGGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
*
18678832 ATAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGCACA--------C-CCCCCGATCGC
519 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCGC
* * *
18678888 CAGAACCCCAATGCC-TCCGGTCAGGTTCTCC-AGTGATGCTCCGACGATGGTGCCCGGACGAAG
584 CGGAACCCCAATGCCGT-CGGTCAGGTTCTCCGA-CGATGCTCCGACGATGGTGCCCCGACGAAG
* * * * *
18678951 AAAAATGCGACACCAGTACATGCCGGAGCCCAACATGTGCTGCCGCAACCCTCGGTCTGATCCAA
647 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGA
* *
18679016 GCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACC
712 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * **
18679081 CATGAAACGAGCGTGCGGGCGCTCAGCCGACCAAAGGGGCGGGATGCGCAAGCCGGGGATCGGCC
777 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATC
* * * ** * * * *
18679146 GGGTCCCCCTCTGCATGCTACCGATCCTACTGTTGCAACACTCAGTCCGATCTGAT
842 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * * *
18679202 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAGCGAGCGGACGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * *
18679267 CACTACGCCGACGAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* ***
18679332 GCACATCTTCATATTTATGCCCACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
18679397 TTAAGCCTTCACGTGCAGTTTCATGGCAAGACGACTCGTTTTCTGTTTTTCATGATTTTTGAAAC
195 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * *
18679462 TTTTT-CGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCCCCATACTTGGTAGACG
260 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * * *
18679526 TGATCCTTCTATTTTTCTTGGCATGCACAAAAAAATTCACCTAAAAACTTGAAGTGTACAAGATT
324 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * *
18679591 TTGTGACCATTTGAGAAAAGTGTCCCCATTTCAGACACTTTAATGGCAATTGGTAGCAAACCTGT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
18679656 AAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
** * *
18679721 ATAAGCACCAAGTACCAGCACCCATCGGACATCATGTGCGCACACCCCCCGGC-CCCCGGATCGC
519 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCGC
* * *
18679785 CGGAACCCCAATGCTGCCGGTCAGGTTCTCCGACGATGCTCC-AGCAATGGTGCCCCGACGAAGA
584 CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGACGAAGA
* * * * * * * *
18679849 AAAATGTGGCTCCAGCACATGCTCGAGCCTAGCATGTGCTGCCGTAACCCTCGGTC-CAGTTCAA
648 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA-TCCGA
* *
18679913 TCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAACTCAACC
712 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * *
18679978 CACGAAACTAGCGTGCGGGTGCTCAACCGGCTAGAA-GGACGGGATGCGCAAGCCGAGGATCGA-
777 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA-AAGGGGCGGGATGCGCAAGCCGGGGATCGAT
* * * * *
18680041 CCGGTCCCCCT-TCGCGTG-TAGTCGATTCTGCTGTCGCAACCCTCGGTCCGGTCCGAT
841 CGGGTCCCCCTCT-GCGTGCT-GCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * * * * *
18680098 CTTAGACTAGGAATGAAGTTCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
** * *
18680163 GTCTACGCCGGCCAGAGAGACGGGATGTGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
18680228 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
*
18680293 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAAC
195 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * * *
18680358 TTTTTGCGATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACCTGTTAGACA
260 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* ** * *
18680423 TGATCCTTGTATTTTTTTTGGTGTGCACAAAAAAACTCAGCTAAAAACTTGAAGTGTACAAGATT
324 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
18680488 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAACGGCTACTGGCAGCAAACCTGT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
18680553 AAAATCTCAAATGCGCTTTAACGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * * * *
18680618 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGGGTGTACACCCCCCCGCCCCCCCGATCGT
519 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCGC
* * * ** * * ** *
18680683 CGAAACCCTAATTCCACCTGTCAGGTTCCCCGGTGATGCTCCGACGATGGTGCCCCGATGAAGAA
584 CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAA
* * *
18680748 AAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAA--C-C-AT-TGGTCC-A--
649 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATC
*
18680805 TT---C------TG-A-----T-TG--TAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCA
714 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * * *
18680852 CGAAATGAGCGTTCGGGCGCTCAGTCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGTCGG
779 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGG
* ** * * *
18680917 GTCCCCCTCTGCGTGTTATCGATCCTGCTGCCGCAACCCTCAGTCCAGTTCGAT
844 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * * ** ** *
18680971 CTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGA-CAAA--A-CAAGCGGGTAGGCAAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * **
18681032 CACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATTGATCTGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
*
18681097 GCACAACTTCATATTTCT-ATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
131 GCACATCTTCATATTTCTCA--TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
18681161 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
194 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* *
18681226 CTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTGGGCCCCAAACTTGGTAGAC
259 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * * *
18681291 GTGATCCCTGTATTTTTTTTGGCATGCACAAAAAATTTCAGCTAAAATCTTGAAGTGTACAAGAT
323 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * * * *
18681356 TTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAAACACTTTAATAGCTACTAGCAGCAAACCTA
388 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
18681421 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
453 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * *
18681486 TATAAGGGCCAAGTACCAGTACCCATTGCACACCATGTGCGCACACCCCCCGGC-CCCCCGATCA
518 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCG
** * * * * *
18681550 CCAAAACCCAAATGTCGCCTGTCAAGTTCT-C--C---G----G-CGATGGTGCCCCGACGAAGA
583 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGA
* ** * * * *
18681604 AAAATACAACACCAGCACATGCCCGAGCCAAGCATGTTCTGCCGCAACCCTTGGTCT-AGTCTGA
648 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA-TCCGA
* * * *
18681668 TCTTAGACTGGGAATGAACTTCGTCTGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACC
712 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * * *
18681733 AAAGAAACGAGCGTGTGGGCGCTCAGCCGACTAGAGGGGCAGGATGCGCAAGCCGGTGATCGATC
777 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATC
* * * * * * *
18681798 GGGTCGCCCTCTGCGTTCTGCCAATCCTACTGCTGCAACCCTCGGTCTGATCCGAT
842 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTC-GGTCCGAT
** *
18681854 CTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAATCGA-GAAAACGAGCGGGCGGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATG-AAACGAGCGGGCGGGCGGGC--
18681918 GAGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
63 GA--GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
18681983 TTTAGGCACATCTTCATATTTCCCCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATG
126 TTTAGGCACATCTTCATATTT-CTCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * ** *
18682048 GTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAGTTTTCACGGCTTTC
190 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * *
18682113 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAAATTGGT
255 GAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGT
* * * *
18682178 AGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAACATTTAGCTAAAAACTCGAACTGTACA
319 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
18682243 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTATTGGCAGCAAA
384 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
18682308 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGAGG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * *
18682373 CCAACATAAGGGCCAAGTACCAGCACCCATCGAACATCATGGGCGCACACCCCCCGGGCCCCCCC
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCACCCCC
* * *
18682438 GATCGTC-GAAGCCCCAATGCCTTCGGTCAGGTTCTCCGACGATGCTCCGACGATCGTGCCCCGA
578 GATCGCCGGAA-CCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* * * * * *
18682502 TGAAGAAAAATGCAGCACCAGCACGTGCCCGAGCCCAGCTTGTGCAGCCGTAACCCTCGGT-TCG
642 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-G
* * *
18682566 GTCCGATCTTAGACAGGGAATGAACTCCGTATGCTTAGACAGGGAATGAACTCCGTATGCCTAAG
706 ATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
18682631 TCAACCCAC-AAA--A-----CGAGCG-T-A--C-G-----GGGGTGGGATGCGCAAGCCGAGGA
771 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGA
** * * ** *
18682678 TC-AGTCAAGTCCCCCTCTGCGTGCTGGCGATCCTGCTACCGCAACCCTCAGTTCAATCTGAT
836 TCGA-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* *
18682740 CTTAGACTGGGAATGAACTCCGTATGCCTAAG-CAAACCGATGAAATGAGTGGGCGGGCAGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAA-CGATGAAACGAGCGGGCGGGC--G-GG
* * * * * * * * * *
18682804 ACGGGCATTATGCTGGCCAAAGACACAGGATGCGCAAGCCGTGGATCAATATGGTGATAGGTGGG
62 -CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
18682869 TTTAGGCACATCTTTATA-TTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACG
126 TTTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
18682933 GTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
190 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
*
18682998 GAAACTTTTTGCGGTTTGGGATTTTTT-AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
255 GAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGT
*
18683062 AGACGTGTTCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
319 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
18683127 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGTTACTGGCAGCAAA
384 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
18683192 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * * * *
18683257 ACAATATAAGGGCCAAGCACCAGAACCCATCGCACATCATGTGTGCACACCCCCTGAC-CCCCTC
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCC-C
* * ** ** **
18683321 GATCGCCGAAACCCCAATGCCGCCAATCAGGTTCTCCGACGATGCTCCGACGATGGTGCCATGGT
578 GATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
* * *
18683386 GAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCT-AG
643 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA-
* * * *
18683450 TCTGATCTTAGACTGGGAATGAACTCTGTATGCTT-GAACTGGGAATGAACTCTGTATGCCTATG
707 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG-ACTGGGAATGAACTCCGTATGCCTAAG
* ** * * *
18683514 TCAACCCACGAAACGAGTGTGCGGGCGCTCAAACTGCCAGAGTGGCGGGATGCGCAAGCCGGGGA
771 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGA
* * * * ** * ***
18683579 TC-AGCCGGGTCCCCCTCTGTGTGCTACCAATCCTGCTGTGGCAACCCTCGATCTGGAAGGAT
836 TCGA-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTC-GGTCCGAT
* * * *
18683641 CTTAGACTGGGAATAAACTTCGTATGCCTAAGGC-AACTGATGAAAACGAGCGGGCGGACGGGC-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAAC-GATG-AAACGAGCGGGCGGGCGGGCG
* * *
18683704 AGGCACTACACCGGCCAGAGAGACGGGAAGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTT
64 A-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * * *
18683769 TAGGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGGC
128 TAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* ** **
18683834 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCCTTTTCTATTTTTCACAATTTTCAA
192 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * *
18683899 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGAATTTTTGGCCCCAAACTTGGTAG
257 AACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * *
18683964 ATGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTTAAAACTCCAAGTGTACAAG
321 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
18684029 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCGGCAAACC
386 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
18684094 TGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGAC
451 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * * * *
18684159 AATATAAGGGCCAAGCACCAGAACCCATCGCACATCATGTGTGCACACCCCCTGACCCCCCCGAT
516 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGAT
* * ** * *
18684224 CGCCGAAACCCCAATGCCGCCAATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCTGACGAA
581 CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
* * * *
18684289 GAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTC-CAGTCT
646 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA-TCC
* *
18684353 GATCTTAGACTGGGAATGAACTCTGTATGCTT-GAACTGGGAATGAACTCCGTATGCCTATGTCA
710 GATCTTAGACTGGGAATGAACTCCGTATGCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCA
* ** ** * *
18684417 ACCCACGAAACGAGTGTGCGGGCGCTCAAACTACCAGAGTGGCGGGATGCGCAAGCCGGGGATC-
774 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCG
* * * * ** * ***
18684481 AGCCGGGTCCCCCTCTGTGTGCTACCAATCCTGCTGTGGCAACCCTCGATCTGGAAGGAT
839 A-TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTC-GGTCCGAT
* * * *
18684541 CTTAGACTGGGAATAAACTTCGTATGCCTAAGGC-AACTGATGAAACGAGCGGGCGGGCAGGC-A
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAAC-GATGAAACGAGCGGGCGGGCGGGCGA
** * *
18684604 GGCACTACATCGGCCAGAGAGACGGGAAGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTT
65 -GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * *
18684669 ATGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGGCC
129 AGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
** **
18684734 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAA
193 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * *
18684799 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGAATTTTTGGCCCCAAACTTGGTAGA
258 ACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * *
18684864 TGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTTAAAACTCCAAGTGTACAAGA
322 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * *
18684929 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATAGCTACTGGCGGCAAACCT
387 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * *
18684994 GTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTCATGAGGGATAGAGGGCCA
452 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
*
18685059 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CCGACCCCCCGA
517 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC-A-CCCCCGA
* * * * * * * **
18685123 TCACCAGAACCCCAATGCCGACGGTCAGGTTCTCCGGCAACGCTCCGGCGATGGCACCCCGACGA
580 TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA
* *
18685188 AGAAAAATGCGGCACCAGCAAATGCCTGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC-G----
645 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCC
*
18685244 G---TT---C---G---G---TCCG-AT-CTTAGATTGGGAATGAACTCCGTATGCCTAACG-CA
710 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA-GTCA
* * * * * * * * *
18685291 ACCCACGAAAGGAGCGTGCGGGTGCTTAACCGGCTAGAGGGGCGGGATGCACAACCCGGGGATCA
774 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCG
* * * * * * * *
18685356 ATCGGGTCCCACTCTGCGTGCTGCCGATCTTGCTACTGGAACCCTCGGTCTGGTCTGGT
839 ATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTC-GGTCCGAT
* * * * * *
18685415 CTTAGACTAGGAATGAACTCCATATGCCTGAG-CTAACTGACGAAACGAGCGGGCAGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAAC-GATGAAACGAGCGGGCGGGCGGGC-G
* *
18685479 ACGGTCACTACGCCGGCTAGAGACACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
64 A--G-CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * * *
18685544 TTTAGGCACATTTTTATATTTCTACGTGCCAATGCCATTTTAATGGCTTGTAAATTCATATAATG
126 TTTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* ** *
18685609 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACAATTTTC
190 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * *
18685674 AAAAATTTTTGCAGTTCGGGATTTTTTAAAATTTTTTTGGAAGGTGTTGTGGCCCCAAACTTGGT
255 GAAACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * ** * *
18685739 AGACGTGATCTTTCTATTTTTGTTGGCGTGC-TTAAAAAATTCAGCTAAAAACTTGAAGTGTACG
319 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* **
18685803 AGATTTTCTGACCATTTGAAAAAAGTGTCCTGATTTCAGACACTTTAATGGCTACTGGCAGCAAA
384 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
18685868 CCTGTAAAATATCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* *
18685933 CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACAGCCCGCCCGGCCCCCC
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCCGGCACCCC
* * * * * *
18685998 CGATCGCCGGAACCCCAATGTCGCCGGTCAAGTTCTACGACGATGCTCTGGCGATGGTGCCCCGA
577 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* ** * * * * * *
18686063 CGAAGAAAAATGCGACACCAGTGCATGCCCTAGCCCAGCATGTGCTGCCACGATCCTCGGTCAGG
642 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA
* * *
18686128 TCCGATCTTAGACTGGGAATTAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCAAAGT
707 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
** * * * * * *
18686193 CAACCCACGAAACGAGCGTGCGGGTACTGAGCCAGCCAGAGGGGCGAGATGGGCAACCCGGGGAT
772 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * *
18686258 CAGA-CGGGTCCCCCTCTGCGTGTTACCGATCTTGCTGCCACAACCCTCGGTCTGGTCCAAT
837 C-GATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTC-GGTCCGAT
* * * *
18686319 CCTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGAGCGGGTGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATG-AA--A-CGAGCGGGCGGGCGGG
* * * * *
18686384 CGAGCACTACGCCGGTCAGTGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTAGTAAGTGGGT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
18686449 TTAGGCACATCTTCATATTTC-CACGTGCCAATGCCATTTTTATAGCTTGTAAATTCATACAATG
127 TTAGGCACATCTTCATATTTCTCA--TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
18686513 GTCCCTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
190 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * *
18686578 GAAACTTTTTGCTGTTTGGGATTTTTAAAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGT
255 GAAACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
**
18686643 AGACGTGATCCTTGTATTGTTT-TTGGGGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
319 AGACGTGATCCTTGTATT-TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
18686707 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAA
383 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
18686772 ACCTGTAAAATCTCAAATACTCTTAAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
448 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
18686837 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC-CCTCC
513 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACC-CC
* * * * *
18686901 CGATCGCTGGAACCCCAATGTCGTCGGTCAGGTTCTCTGACGACGCTCCGGCGATGGTGCCCCGA
577 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
* * *
18686966 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCATCATGTGCTGCCACAACCCTCGGTC-CA
642 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA
* * *
18687030 GTCCGATCTTAAACTGGGAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAG
707 -TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
18687095 TTAACCCACGAAATGAGCATGC-GG-GC-CA----G---AA-GGG-GGGATGCGAAACCCGGGGA
771 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGA
* ** * * ** * * *
18687148 T-GAACCGGGTCCCATTCTGCGTGCTGCCAATCTTGCTGTTGCAACCCTCGGTCTGGTCTGGT
836 TCG-ATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTC-GGTCCGAT
* * * * *
18687210 CTTAGACTAGGAATGAACTTCGTATCCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGC-GA
* *
18687275 CGATCACTACGCCGACCAGAGACA-GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
65 -G--CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * ** *
18687339 TTAGGCACATTTTTATATTTCTGTGTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
18687404 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTA
191 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
18687469 AAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTGTTGTGGCCCCAAACTTGGTA
256 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
18687534 GACGTGATCCTTGTATTTTT-TTGGCGTGCTA-AAAAAAATCCAGCTAAAAACTCGAAGTGTACG
320 GACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
18687597 AGATTTTGTGACCATTTGAAAAAAGTTTCCCGATTTCAGACACTTTAATGGCTACTGGCAGCAAA
384 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
18687662 CCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATACGGAG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** * * * *
18687727 CCAATATAAGGGCCAAGTACTGGAACCCATCACACATCATGTGCGCATAGCCCCCCGGTC-CCTC
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CACCCC
* ** * *
18687791 CGATCGTCGGAACCCCAATGTTGTCGATCAGGTTCTCC-AGCGAAGCTCCGACGATGGTGCCCCG
577 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-CGATGCTCCGACGATGGTGCCCCG
* * * *
18687855 ACGAAGAAAAATGTGGCACCAGCGCATGCCCTAGCCCAGCATGTGCTGCCACAACCCTCGGTCTG
641 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTG
* * * * *
18687920 GTCCGATCTTAGACTGGGAATTAACTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCAAAG
706 ATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * *
18687985 TCAACCCACAAAACGAGCGTGCGGGTGCTCAGCCAGCCAGATGGGCGGGATGCGCAACCCAGGGA
771 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * * *
18688050 TCGGTCGTGTCCCCCTCTGCGTGCTACCGATCTTGCTGCCACAACCCTCGGTCCAGTCCGAT
836 TCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * * *
18688112 CTTAGGCTGGGAATGAACTCCGTATGCCTCAGCCAACCGACGAAACGAGCGGGTCGGCGGGTGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGC--G--GGCGGGCGGG
* * * * ** * *** ** ** *
18688177 CGGGAATTACGCCGGCCAGAAAGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCT-TTTGT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT--GGTAGGTGG
* * ** * * ** * *
18688241 GTGCT--GC-CGATCTTGC-TA--TCGCAACCCTCA-GTC-TGGTTCTGATCTTAGACTGAGAAT
125 GT-TTAGGCAC-ATCTT-CATATTTCTCATGCC-AATGCCATTTTTATG-GCTT-G--T-A-AAT
** * * ** *** * * * ***
18688298 GAACTCCGTAT-G--CC-TAAGCCAACCGACGAAATG-AGCGGGC-GGGC-GGGCGGA-T-GGGC
180 TCA-TAC-AATGGTCCCTTAAGCC-TTC-ACG---TGAAG-TTTCATGGCAAGAC-GACTCGTTT
* **** ** * *** * * * ** *** ** * *
18688354 ACTACGTCGGCCA-GA---GAGATAGGATATGCAAG-CCGTGGA-TTGAT-AGGGTGGTAGG-TG
236 TCTA--TTTTTCATGATTTTTGAAACTTTTTGC-GGTTCG-GGATTTTTTAAAATTTTTTGGAAG
* * * ** ** * * ** *
18688411 G-GTTTAGG-CAC-ATCTTTATATTTC-TGCATTCCAATGCCCATTTTATGGGTTGTAAATTCAT
297 GAGTTTTGGCCCCAAACTTGGTA-GACGTG-A-TCC-TTG--TATTTT-T--GTTG-GCATGC--
*** *** * ** *
18688472 ACAATGGTCCCTTAAGCCTTCA-CGTGAATTTCATGGCAAGATG-ACTCGTTTTCTATTTTTCAT
350 ACAA---------AAAAATTCAGC-T-AAAAAC-TCG-AAG-TGTACAAG------A-TTTT-GT
** * * *** * * * * ** *
18688535 GA-TTTTTGAAAGTTTTTACG-GTTCGGGATTTTTTA-AAATTTTTTTGGAA-GGAGTTTTGGCC
393 GACCATTTGAAA-----AAAGTG-TCCCCA--TTTCAGACA---CTTT--AATGG-CTACTGGCA
* * ** * ** * ** * ** * *
18688596 CCAAACATGGTAGACGTGATC-CTTG-TATTTTTGTTGGCGAGTGTAAAAAAAT-TC-A-G-CTA
444 GCAAACCT-GTA-AAAT-CTCAAATGCTCTTTAAG--GG-G-GTGT---GAGTTCTCGAGGTTTG
** *** * * ** * ** * ** ** ****
18688655 AAAACTCA-AAGTGTACAAGATTTTGTGACCATTTGA--AAAAAGGGTC-C-C-T-ATGT-CAG-
499 ATGAGGGATAGGGGGCCAATA-TAAG-GGCCAAGT-ACCAGCACCCATCGCACATCATGTGC-GC
** ** * ** * * * * * ** **
18688711 ACACTTTCATGGCTACTGGCAGGAAAC-CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
560 ACAC-CCCCCGGC-AC--CCCCG-ATCGCCG--GAA-CCCCAATGC-C-----GTCGGTCAG-GT
* * ** * * ** * * * * * *
18688775 TCT-TGA-G--GTTTTGATGAGGGATAG--GGGGCCAA-TATAA-G-GGC-CAAGTACCA-GCAC
610 TCTCCGACGATGCTCCGACGATGG-T-GCCCCGACGAAGAAAAATGCGGCACCAGCA-CATGC-C
* * * ** * * * ** * * *
18688829 CCATCACA-CATCAGGTG-CGCACACCC-C--CCCG-TCC-CCCCTA-TC-GTCG---GAAC-CC
671 CGAGCCCAGCATGTGCTGCCGCA-ACCCTCGGTCTGATCCGATCTTAGACTG-GGAATGAACTCC
** * * ** * ** * * ***** * *** *
18688881 CAATGC---CACTAGTCAGGTTCTCCG---G-CGATGGTCCGGTGATGGTCCG-GCGATG-GTGC
734 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTA-AGTCAACCCACGAAACGAGCG-TGCGGGC
* * ** * * * * * ** * * *
18688937 -C-CCGACGAAGAAAAATGCGGTACCAGCACCTGCCCGAGCCCAGCAT-G-T-GCTGCCACAACC
797 GCTCAGCCG--GCCAAA-G-GG--GCGGGA--TGCGCAAGCCGGGGATCGATCG-GGTC-C--CC
* * **
18688997 CTC-G-GT-CTGGTCCGATCTTAGACTG--GGAA---T-GAAC--TCCGTAT
850 CTCTGCGTGCT-G-CCGATCCT-G-CTGCCGCAACCCTCGTTCGGTCCG-AT
*** * * * * *
18689038 GCTTAGAGAAGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAC-A---AGCGTGCGGGC--
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGA
* * ** * * * ****** ** *
18689097 GCTC-A-GCCGGCCAGAGAGGCGGGATGCATAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGC
65 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT-GGTAGGTGGGT-T
* * * * *** * * **
18689160 TA-CCGATCCTGCGATCACAACCCTCA-GTCCAGT-CTGATCTTAGATTGGGAATCAACTTCGT-
128 TAGGC-A-CAT-C-TTCATATTTCTCATG-CCAATGC-CAT-TT---TT----AT-GGCTT-GTA
* * ** * **** *** * * * *
18689221 -ATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGCGTGCACCACG--TCA-GCCTGAGA-GACG
177 AATTCAT-A--CAATGGTC-CCTTAAGCCTTC--ACGTG-A--A-GTTTCATGGC-AAGACGACT
* *** * ** ** *** ** ** * * * ** * * *
18689281 GGATACGCAATCCGTGGATCGATAGGGTGGTA--GGTTG-GTTTAGGCACATGTTCATATTTCTA
231 CG-TTTTCTAT-TTTTCAT-GAT-TTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTT-T-
* * * *** ** * * *
18689343 TGTGCCAATGCCATTTTTATGGCTTGTAAA-TTCATACA-ATGGTCCCTTAAGCCTTCATGTGAA
290 T-TG-GAA-G-GA-GTTT-TGGC-CCCAAACTTGGTAGACGTGAT-CCTT--G---T-AT-T---
** * *** *** * * **** * * *
18689406 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTCTCAAATCTTTTTGCGGTTCGAGAT
337 -TTTGTTGGCATG-C-A--C----AAAAAAATTCA-G---CTAAAAACTCGAAG-TGTACAAGAT
* ** ** * **
18689471 TTT-TTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGT-AGACGAGATCATTGT-ATTT
388 TTTGTGACCA----TTTGAAAAAAG---TGTCCCC--A-TT--TCAGAC---A-C-TT-TAATGG
* ** **
18689533 TTGTTGGCATGCACAAAACAATTCAACTAAAAAATCGAAGTGTACAAGATTTTG-TGACCATTTG
435 CTACTGGCA-G--C---A-AA--C--CTGTAAAATC------T-CAA-A---TGCT---C-TTT-
**** * * * ** * ** ** *
18689597 AAAAAAGTGTCCCACTT-TAGACACTTTAATG-GCTACT-GGCAGCAAACCTGTAAGATATCAAA
473 AAGGGGGTGT--GAGTTCTCGA-GGTTTGATGAGGGA-TAGG--G--GGCC----A-ATAT-AAG
* ***** * * * *
18689659 TGCTCTTTAAGGGAGTGTGAGTTCTCAAGGTTTGATGAGGA-ATAGGGGGCCAATATAAGGGC-C
524 GGC-C----A---A--GT-A---C-C-AGCACCCAT-CGCACAT-------C-ATGT--GCGCAC
**** * * * *
18689722 AAGTACCAGCACCCATCACACATCATGTGCGTACACCCCCCGGCCCCCCGATCACCGAAACCCAA
562 ACCCCCCGGCACCC--C-C-GATC--G-CCGGA-A-CCC-----------------------CAA
* * ** ** ** *
18689787 TGCCGTCGATCAGGTTCTCTGGTGATGCTCCGGTGATGGTGCCCCGGGGAAGAAAAATACGGCAC
595 TGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * *
18689852 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
660 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGA
* * * *
18689917 ATGAACTTCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCC
725 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * ** * * * * *
18689982 TGTGGGCGCTCTGCCTACCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTTTA
790 TGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTG
* * * ** * ** *
18690047 CGTGCTACCAATCTTTTTGCCACAACCCTCAG-TCTGAACCAAT
855 CGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTC-GGTCCGAT
* * * * * *
18690090 CCTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAACGGGCATGTGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGC----GGGCGGG
* * * * * * *
18690155 CGAGCACTATGCCGGCCAGAGAGACAGGATGCGTAAGCCGTCGATCGATAAGGTAGTGGGTGGGT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
18690220 TTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
18690285 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTA
191 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
18690350 AAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAATTGGTA
256 AAACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
*
18690415 GACATGATCCTTGTATTCTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
320 GACGTGATCCTTGTATT-TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
18690479 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAA
384 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
18690544 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
18690609 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGAC-CCCCCG
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCG
* *
18690673 ATCGTCGGAACCCCAATGCC-TCCGGTGAGG-T-T----C--T--T-CGACGATGGTGCCCCGAC
579 ATCGCCGGAACCCCAATGCCGT-CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
** **
18690726 GAAGAAAAATG-GGCAGTATTACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCT-A
643 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGA
* *
18690789 TCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGT
707 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
** * * * * * * * *
18690854 CAACCCATAAAATGAGTGTGAGGGTGCTCAGTCGGCCAGAGGGGCGGGATGTGCAAGTCGGGGAT
772 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * * * **
18690919 CGAT-GGG-ACCCCTCTGCATGCTACCGATCCTACTGCCGTAACCCATGGTCCGGTCTAAT
837 CGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCC-TCGTTCGGTCCGAT
* * * ** *
18690978 CATAGACTGGGAAAGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGCCTA-A---GCCA--AA---CG-ATG----A---AA-CG
** * * * * * * * * *
18691043 A-CGAAACGAGCGTGCGGGCGCT-CAGCCGGCAAGACAGAAGGGATGCGCGAGCCGGGGATCGAT
48 AGCG-GGCGGGCGGGCGAGCACTAC-GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* ** * * * * * * * *** * *
18691106 CGGGTCCCCCTCTACGT-GCTGT-CG-ATCCTGTTGCCACAACCCTCGAT-CCAAT-CTGA-TAT
111 AGGGT-----GGTAGGTGGGTTTAGGCA-CATCTT--CATATTTCTC-ATGCCAATGC-CATTTT
* ** ** * * ** ** ** * *
18691165 TA-GAC-TGGGAATGAACTCCGTAT-G--CC-TAAGCCAACCAACGAAACGAGTGGGC-GGGC-T
166 TATGGCTTGTAAATTCA-TAC-AATGGTCCCTTAAGCC-TTC-ACGTGA--AGT-TTCATGGCAA
* ** ** * *** * ***** * **** *** ** * * * *
18691222 GGCG-GGCG--GGC-ACTACGC-CGACCAGAGAGACGGGATGC-GCAAGCCATTGATTGATAGAG
224 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATT-TTTTA-AAAT
** * * * * * ** ** * * * *
18691281 TGGTAGG-TGG-GTTTAGG-CAC-ATCTTCATATTTC-TGCATGCCAATGCCATTTTT-ATGGCT
287 TTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA-GACGTG-AT-CC-TTG-TATTTTTGTTGGCA
* * * * ** *
18691340 TGTA-AATTCATACAATGGTC-CCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTT
347 TGCACAA---A-AAAAT--TCAGCTAAAAAC-T---C-GAAGTGT-A---C-A-A-GA-T--TTT
* * * * ***
18691403 -TCTATTTTTCATGATTTTTGAAACTTTTTACG-GTTCAGGATTTTTCA-A-ATCTTTTCGGAA-
391 GT-GA-----C--CA--TTTGAAA-----AAAGTG-TCCCCA--TTTCAGACA-C-TTT---AAT
** ** * ** * ** * ** ** ** ***
18691463 GGACTTTTGGCCCCAAACTTGGTAGACGTGATC-CTTG-TATTTTTGTTGGCATGCACAAAACAA
433 GG-CTACTGGCAGCAAACCT-GTA-AAAT-CTCAAATGCTCTTTAAG--GGGGTG-TGAGTTC--
* * ** ** * * * * * * **
18691526 TTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCAGT-TTA
489 -TCGAGGT------TTG-A-TG-A-GGGA-TAGGGGGCCA----ATATAAG-GGC-CAAGTACCA
** * * ****** * * ** ***
18691589 GACACTTTAATTGC-CA-C-TG-GCAGCA-AACCTGTAAAATCTCAAAT-GCTCTTTA----AA-
536 G-CAC--CCATCGCACATCATGTGC-GCACACCCCCCGGCACCCCCGATCGC-CGGAACCCCAAT
** * * * * * * * *
18691643 GGGGT--GTGA-GTTCT-CGAGGTTTGAT--GAGGGATAGG-G----GACCAA-TATAA-G-GGC
596 GCCGTCGGTCAGGTTCTCCGACG-ATGCTCCGA-CGAT-GGTGCCCCGACGAAGAAAAATGCGGC
* * * * * * * ** * *
18691694 -CAAGTACA-GCACCCATCGCACATCATGTG-TG-CAC-ACCCCCTGCCCCCGATCATCGGAACC
658 ACCAGCACATGC-CCGA--GCCCAGCATGTGCTGCCGCAACCCTC-G-GTCTGATC--C-G-ATC
** ** ** *** ** *
18691754 CCA-A-TGTCATCTATCAGGTTCTCCCACGATAGTGCCCCGA--GGAAGAAAAATGCGGCACCAG
714 TTAGACTGGGA---AT---GAACT--C-CG-TA-TGCTTAGACTGG--G---AATG-AACTCC-G
* * * *** *** * * * *
18691815 CACATGCCTGAGCCCAGCATGTGCTGTCGAAACCCTCGGTACGGTCCGATCTTAGACTGG--AAA
761 --TATGCCTAAG-TCA--A----CCCACGAAACGAGC-GTGCGG-GCG--CTCAG-CCGGCCAAA
*** * * ** * * * *** ** *** ** *
18691878 TGAACTCTGTATGC-TTAGACTGGGAAT-GAACTC-CGTATGCCTAAGTCAACCCACAAAACGAG
812 -G-GGGCGGGATGCGCAAG-CCGGGGATCG-A-TCGGGTCCCCCTCTG-CGTGCTGC----CGAT
* * * * **** *
18691940 CGTGCGGCTGCTCAACCGTCCAGAGGGCCGGGAT
867 CCTGCTGC--CGCAACCCTCGTTCGGTCC--GAT
* * * * ** * * ** ** * * * * * ***
18691974 GGC-AAGCCGGGGATTGGTCGGGTCCCCCTCTGTGTGCTGCCGATCTTGCTG--TCGTAACCTTC
1 --CTTAGACTGGGAATGAAC---T--CCGTATGCCT-AAGCCAAAC--GATGAAACG-AGCGGGC
** * * * ** * ** ** * * * * *
18692036 AGTCCGGTTCGATC-TTAAACTGGGAATGA-ACTCCGTATAC-CTAAGCCAACCGATGAAAC-A-
55 -GGGCGG-GCGAGCACTACGCCGGCCA-GAGAGACGGGATGCGC-AAG----CCG-TGGATCGAT
** * ** * * *** * ** ***
18692096 AGCGGTCCGACGGGCGGGCGGGCACTACGC-CAGCCAGAGAGATGAGATGCGCAA-GCCGTGGAT
111 AG-GGT------GGTAGGTGGG-TTTAGGCACATCTTCATATTTCTCATGC-CAATGCC----AT
* * * * * * *
18692159 CGATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCGA-CGTGCC--AATGCCATTTTCA
163 ---T----T-TTA--T-GGCTT--GTA-A-ATTCATA---CAATGGTCCCTTAA-GCC---TTCA
* * * * * * * *
18692221 TGGCTTGTAAATTCATACAATCGTCCCTTAAGCCTTCACGTGAAGTTTCACGACGAGACAACTTA
206 ---CGTG-AAGTT--T-C-AT-G--GC--AAGAC--GAC-T--CGTTT---------TCTA--T-
* ** * * *
18692286 TTTTC-T-ATTTTTCACGATTTTCAACACTTTTTACGATTCGGGATTTTCTAAAATTTTTTTGGA
241 TTTTCATGATTTTTGA--AACT--------TTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTGGA
* *
18692349 AGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
295 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
18692414 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAC
360 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
18692479 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCT
425 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
18692544 CGAGGTTTGATAAGGGATAGGGGGCCCATATAAGGGCCAAGTA-CAGCACCCATTGCACATCATG
490 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
** * * * * *
18692608 TGCGCACA-CCCCCTACCCCCCCGATCGCCAGAACCCCAATGTCGCCGGTCAGGTTCTCCGGCGA
555 TGCGCACACCCCCCGGCACCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
* ** * *
18692672 TGCTCCGGCGATGGTGCCCCGGGGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGT
620 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * *
18692737 ACTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
685 GCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * *
18692802 AATGAACTCTGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGCGCTTAGCGGGCCAAAGGG
750 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGG
* * *
18692867 GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCTGCAA
815 GCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAA
* * *
18692932 CCCTTGATCTGGTCCAAT
880 CCCTCGTTC-GGTCCGAT
* * * *
18692950 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * * *
18693015 CACTACGCTGGCCAGAGAGACGAGATGCGCAAGTCGTGGATCGATAGGGTGGTATGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
*
18693080 GCACATCTTCATATTTCT-AGGTGCCAATGCCATTTTCATGGCTTGTAAATTCATACAATGGTCC
131 GCACATCTTCATATTTCTCA--TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* *
18693144 CTTAAGCCTTCACGTGAAGTTTCATGGCGAA-ACGACTCGTTTTCTATTTTTTATGATTTTCGAA
194 CTTAAGCCTTCACGTGAAGTTTCATGGC-AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * *
18693208 ACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTTGCCCCAAACTTGGCAGA
258 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
18693273 CGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAACTCAGCCAAAAACTCGAAGTGTACAAGA
322 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * *
18693338 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGCTATTGGTAGCAAACCT
387 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * * ** *
18693403 GTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCCATGTTTGACAAGAGATAGGGGGCCA
452 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * *
18693468 ATATAAGGGCCAAGTACCAGCACTCATCGCACATTATGTGCGCATATCCCCCGGC-CCTCCCGAT
517 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACC-CCCGAT
* * * * * * * * * ***
18693532 CGCCGGAACCCTAATACCATCGGTTAGGTTCTCCGACGATGATCTGGCGAAGGTGCCCTGGTAAA
581 CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
* ** * * * * * ** * *
18693597 GAAAAAAGTAGCACGAGCCCATGCTCAAGCCCAGC-TGTGCTACCGCAATGCTCGATCTGGTCCG
646 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCG
* * *
18693661 ATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATTAACTCTGTATGCCTAAGTCAAC
711 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * * * * * **
18693726 CCATGAAATGAGCGTGCGAGCGCTTAACCAGCCAGAGGGGTGGGATGCACAAGCCAGGGATCGGC
776 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGAT
* ** ** * * * **
18693791 CGGGTCCCTCTCTAAGTGCTATCGATCCTGCTACCGCAACCCTCAGTCCGATCTAAT
841 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * **
18693848 CCTAGACTGGGAATGAACTCTGTATGCCTAAGCCAATCGGCGAAACGAGCGGGCGGGC--G-G-G
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * * * * **
18693909 CATTACGTCGGCCAGAGAGACGAGATGTGCAAGCTGTGGATCGATAGCATGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
18693974 GCACATCTTCATATTTCT-ATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
131 GCACATCTTCATATTTCTCA--TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * *
18694038 CATAAGCCTTCACGTGAAGTTTCATGGGAAGATGACTCGTTTTCTATATTTCACGATTTTTGAAA
194 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* * * *
18694103 CTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCC-AACTTCGTAGGC
259 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
*
18694167 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
323 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
18694232 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTG
388 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
18694297 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCTTGATAAGGGATAGGGGGCCAA
453 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *
18694362 TATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG
518 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCG
* * * *
18694427 CCGGAACGCAAATG-C-T--GTC-GG----CC-A-GGTTCTCCGACGATGGTGCCCCGACGAAGA
583 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * *
18694481 AAAATACGACACCAGCACATGCCCGAGCCCAGCATGTAC-GATCGCAA-CC-C--TC-G----G-
648 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CCGCAACCCTCGGTCTGATCCGA
* *
18694535 TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAGCTTCGTATGCCTAAGTCAACC
712 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * *
18694584 CACGAAATGAGCGTGCGGGCGCTCAACCGGCCAGA-GGGCTGGGATGC-CAAAACCAGGGATCGG
777 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGC-GGGATGCGC-AAGCCGGGGATCGA
* * * * * * * * **
18694647 CCGGGTCCCCCTCTGTGTGCAGCCGATCCTACTACCGCTACTCTTAG-TCTGGTCTAAT
840 TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAAC-CCTCGTTC-GGTCCGAT
** * * * *
18694705 CTTAGACAAGGAATGAACTCCGTATGCCAAAGCCAACCGACGAAATGA----GCGGGC--G-G-G
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
*
18694762 CACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * * *
18694827 GCACATCTTGATATTTTTACGTGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
18694892 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATATTTCATGATTTTTGAAAC
195 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * *
18694957 TTTTTAG-GGTTTGGGATTTTTTTAAATTTTTTCGGAAGGAGTTTGGGCCCC-AACTTGGTAGGC
260 TTTTT-GCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
18695020 GTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGA-
323 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
18695084 TTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
388 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
18695149 TAACATCTCAAATGGTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
453 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *
18695214 TATAAGGGCCAAGTACCTGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATC
518 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCACCCCCGATC
** * * * * * * * * * * * *
18695279 ATCGAAATCCGAACGCCGCCAGTCAGGTTCTCCGGCAAAGCTCCGGCGATGGTGCCTCAACGAAG
582 GCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG
* * * * * * **
18695344 AAAAATACGACACCCGCACATGCCCGAGCCCAGCATGTGCTGCCGGAACCCTTGGTTTGATTTGA
647 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGA
*
18695409 TCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
712 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * * * *
18695474 CATGAAATGAGCGTGCGGGCGCTCAGCCGACCAGAA-GGGCGAGATACGTAAGTCGGGGATCAAC
777 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA-AAGGGGCGGGATGCGCAAGCCGGGGATCGAT
* * * ** * * * *
18695538 CGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCATAACCCTTGGTCCGATTCGAT
841 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCC-TCGTTCGGTCCGAT
* * * * *
18695595 CTTAGACTAGGAATGAGCTCCGTATGCCTAAGCCAACCGACGAAACGAACGGACGGGCGGGTGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACG-A--G-CGGGCGGGCGGG
* * * *
18695660 CGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGCGT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
18695725 TTAGGCACATCTTCATATTTATACCTACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * * **
18695790 TCCCTTAAGCCTTCACGTGAGGTTTCATGGCAAGATGACTCGTTTTCTATTTTTGACGATTTTCA
191 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * * * * *
18695855 AAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGCGTTTTGGCCCTAAACTTGGAA
256 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTA
18695920 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
320 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
18695985 GATTTTGTGACCATTTGACAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAA
385 GATTTTGTGACCATTTGA-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
18696050 CCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATACGGGA
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * *
18696115 CCAATATAAGGGCTAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCG
514 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCG
* * * * * *
18696180 ATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCG--GTATTGCTCTGGCGATGGTGCCCCGG
579 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG-A-TGCTCCGACGATGGTGCCCCGA
* ** * *
18696243 CGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATAATCCTCGGTCTGG
642 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA
* *
18696308 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGT
707 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * ** * * * ** *
18696373 CAACCCATGAAATGAGTGTGCAGGCAC-CTAGCCTACTAGA-GGGCGGGATGCGTAAATCGAGGA
772 CAACCCACGAAACGAGCGTGCGGGCGCTC-AGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * *
18696436 TCGATCGGGTCCCCCTCTGCGTGCTGCTGATCTTGCTACCGTAACCCTCGATCCGGTCTGAT
836 TCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCG-TTCGGTCCGAT
* * * * * * *
18696498 CTTATACTGGGAATGAACTCTGTATGCCTAAGCCAATCGACGACACCAGTGGGCGGGCGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGA-A--A-CGAGCGGGCGGGCGGG
* ** * *
18696563 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCTATGGATCGATAGGGTGGTAGGTAGAT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
** *
18696628 TTAGGCACATCTTCATATTTCT-ATGTGCCAATGATATTTTTATGGCTTGTAAATTCGTACAATG
127 TTAGGCACATCTTCATATTTCTCA--TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
18696692 G-CTCCTTAAGCCCTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTT
190 GTC-CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* ** * *
18696756 TGAAACATTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACATGG
254 TGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGG
*
18696821 TAGACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
318 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* *
18696886 AAGATTTTCG-GACCATTTGAAAAAAATGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCA
383 AAGATTTT-GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
18696950 AACCTGTAAAATCTCAAATTCTCTTTAAGGGGGGGTGAGTTGTCGAGGTTTGATGAGGGATAGGG
447 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
18697015 GGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGCACCCCCCTCGGCCCC
512 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGCACC
* * * * **
18697080 CCCGATCGTCAGAACCCCAATGCCGTCGGTTAGGTTCTCC-AGTGATGCTCCGGTGATGGTGCCC
575 CCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-CGATGCTCCGACGATGGTGCCC
* * * * *
18697144 C-AGTGAAGAAAAATACGGCACCAGCACTTGCCCAAGCCCAGCATGTGCTGCCACAA-CC-C--T
639 CGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
18697204 C-G----G----T---C------TG-A-TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCT
703 CTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * * * *
18697247 AAGTCAACCCACAAAATGAACGTGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGTAAGCCGA
768 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGG
* * * * * ** * **
18697312 GGATCGGTCAGGTCCCCCTCTACGTGTTGTCGATCCTGCTGCCGCAACCCTCTGACCAGTTGGAT
833 GGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * *
18697377 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGC--G-G-G
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
* * **
18697438 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAAGGTGGTACCTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
18697503 GCACATCTTC--A--TCT--T--C-A---CATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
131 GCACATCTTCATATTTCTCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * * *
18697556 TAAGCCTTCACGTGAAGTTTCATGGGAAGATGACTCGTTTTCTATATTTCACGATTTTTGAAACT
196 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * * * *
18697621 TTTTACGGTTTGGGATTTTTTTAAATTTTTTCGAAAGGAGTTTTGGCCCC-AACTTGGTAGGCGT
261 TTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
*
18697685 GATCCTTGTATTTTTGTTGGCATGCA-TAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
325 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
*
18697749 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTA
390 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* * * *
18697814 AAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCTTGAGGCTTGATGAGGGATAGGGGCCCAATA
455 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* *
18697879 TAAGGGCTAAGTACCGGCACCCATCGCACATCATGTGCGCACAACCCCCCGGGTC-CCCCCGATC
520 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCC-GG-CACCCCCGATC
* * * * *
18697943 GCCAGAACCCTAATG-C-TAC---CA-----ACC-A-GGTTCTCCGACGATGGTGCCCCGACGAA
582 GCCGGAACCCCAATGCCGT-CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
* * * * * *
18697996 GAAAAATGCGGCACTAGCACATGTCCGAGCCCAGCATGTACGGTCGC-ATCC-C--TC-G----G
646 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCG
* *
18698052 -TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAGCTTCGTATGCCTAAGTCAAC
711 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
** * ** * * *
18698100 CCACGAAACGAGCGTGC-GATGCTCAGCCGGCCAGAGGGTTGGGATGC-CAAGGCTGGTGATCGG
776 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAA-GCCGGGGATCGA
* * * ** ** *
18698163 TCGGGTCCCTCTCTACGTGCTGCCGATCCTGCTGCCGCTAGTCTCAGACCGGTCTGAT
840 TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-GTTCGGTCCGAT
* * * * * * * *
18698221 CTTAGACAGGTAATGAACTCTGTATGCCAAAGCCAACCGACGAAATGAGCAAGCGGGCGGGCGGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATG-AA--A-CGAGCGGGCGGGCGGG
* *
18698286 CGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
62 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * * * *
18698351 TTCGGCACATCTTCATATTTCTGCGTGCCAATTCTATTTTTATGGCTTATAAATTCATATAATGG
127 TTAGGCACATCTTCATATTTCT-CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * * *
18698416 TCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACAACTCATTTTCTATTTTTCAGGATTTTTA
191 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
18698481 AAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
256 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTA
*
18698546 GATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
320 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
18698591 ATGCCAGAGG
Statistics
Matches: 20301, Mismatches: 3190, Indels: 2482
0.78 0.12 0.10
Matches are distributed among these distances:
843 2 0.00
844 120 0.01
845 123 0.01
846 3 0.00
847 4 0.00
848 11 0.00
851 1 0.00
852 245 0.01
853 326 0.02
854 4 0.00
855 4 0.00
856 230 0.01
857 268 0.01
858 143 0.01
859 7 0.00
861 3 0.00
862 9 0.00
863 1 0.00
864 65 0.00
865 141 0.01
866 38 0.00
867 17 0.00
868 33 0.00
869 479 0.02
870 2 0.00
871 118 0.01
872 85 0.00
873 654 0.03
874 795 0.04
875 159 0.01
876 127 0.01
877 198 0.01
878 425 0.02
879 121 0.01
880 9 0.00
881 6 0.00
882 58 0.00
883 345 0.02
884 279 0.01
885 128 0.01
886 208 0.01
887 217 0.01
888 366 0.02
889 1258 0.06
890 1444 0.07
891 818 0.04
892 20 0.00
893 298 0.01
894 241 0.01
895 22 0.00
896 314 0.02
897 772 0.04
898 734 0.04
899 1345 0.07
900 1369 0.07
901 153 0.01
902 592 0.03
903 780 0.04
904 892 0.04
905 410 0.02
906 40 0.00
907 39 0.00
908 23 0.00
909 2 0.00
911 1 0.00
912 1 0.00
913 1 0.00
914 5 0.00
915 47 0.00
916 3 0.00
917 10 0.00
918 7 0.00
919 15 0.00
920 6 0.00
921 6 0.00
922 9 0.00
923 3 0.00
924 6 0.00
925 11 0.00
926 23 0.00
927 59 0.00
928 17 0.00
929 7 0.00
930 29 0.00
931 28 0.00
932 33 0.00
933 29 0.00
934 18 0.00
935 19 0.00
936 23 0.00
937 19 0.00
938 23 0.00
939 37 0.00
940 17 0.00
941 9 0.00
942 25 0.00
943 37 0.00
944 37 0.00
945 18 0.00
946 20 0.00
947 24 0.00
948 13 0.00
949 13 0.00
950 15 0.00
951 17 0.00
952 14 0.00
953 22 0.00
954 16 0.00
955 17 0.00
956 15 0.00
957 29 0.00
958 25 0.00
959 13 0.00
960 12 0.00
961 11 0.00
962 8 0.00
963 6 0.00
964 3 0.00
965 3 0.00
966 15 0.00
967 32 0.00
968 4 0.00
969 18 0.00
970 24 0.00
971 9 0.00
972 5 0.00
973 1 0.00
974 10 0.00
975 14 0.00
976 3 0.00
977 8 0.00
978 8 0.00
979 15 0.00
980 1 0.00
981 4 0.00
982 4 0.00
983 6 0.00
984 23 0.00
985 18 0.00
986 28 0.00
987 21 0.00
988 19 0.00
989 13 0.00
990 3 0.00
991 10 0.00
992 9 0.00
993 14 0.00
994 8 0.00
995 13 0.00
996 14 0.00
997 24 0.00
998 6 0.00
999 8 0.00
1000 26 0.00
1001 8 0.00
1002 15 0.00
1003 8 0.00
1004 5 0.00
1005 9 0.00
1006 12 0.00
1007 10 0.00
1008 19 0.00
1009 21 0.00
1010 4 0.00
1011 7 0.00
1012 15 0.00
1013 18 0.00
1014 9 0.00
1015 11 0.00
1016 16 0.00
1017 24 0.00
1018 8 0.00
1019 3 0.00
1020 7 0.00
1021 6 0.00
1022 10 0.00
1023 15 0.00
1024 330 0.02
1025 416 0.02
1026 376 0.02
1027 552 0.03
1028 377 0.02
1029 574 0.03
1030 418 0.02
1031 426 0.02
1032 485 0.02
1033 386 0.02
1034 262 0.01
1035 357 0.02
1036 338 0.02
1037 297 0.01
1038 307 0.02
1039 344 0.02
1040 361 0.02
1041 253 0.01
1042 324 0.02
1043 319 0.02
1044 272 0.01
1045 306 0.02
1046 303 0.01
1047 236 0.01
1048 396 0.02
1049 142 0.01
1050 301 0.01
1051 266 0.01
1052 273 0.01
1053 150 0.01
1054 173 0.01
1055 459 0.02
1056 158 0.01
1057 172 0.01
1058 147 0.01
1059 249 0.01
1060 339 0.02
1061 216 0.01
1062 161 0.01
1063 179 0.01
1064 116 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAACGATGAAACGAGCGGGCGGGCGGGCGAG
CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
TTTTGCGGTTCGGGATTTTTTAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCACCCCCGATCGCCG
GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTT
AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
AAACGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT
CCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGTTCGGTCCGAT
Found at i:18679052 original size:26 final size:26
Alignment explanation
Indices: 18679016--18679069 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
18679006 TCTGATCCAA
*
18679016 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTGGGAATGAACTCCATAT
18679042 GCTTAGACTGGGAATGAACTCCATAT
1 GCTTAGACTGGGAATGAACTCCATAT
18679068 GC
1 GC
18679070 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
GCTTAGACTGGGAATGAACTCCATAT
Found at i:18679950 original size:26 final size:26
Alignment explanation
Indices: 18679914--18679966 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18679904 CCAGTTCAAT
18679914 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
18679940 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18679966 C
1 C
18679967 CTAACTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18682602 original size:26 final size:26
Alignment explanation
Indices: 18682573--18682625 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18682563 TCGGTCCGAT
18682573 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
18682599 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
18682625 C
1 C
18682626 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.26, T:0.23
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCGTATG
Found at i:18686163 original size:26 final size:26
Alignment explanation
Indices: 18686134--18686186 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18686124 CAGGTCCGAT
* *
18686134 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
18686160 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
18686186 C
1 C
18686187 CAAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18687956 original size:26 final size:26
Alignment explanation
Indices: 18687927--18687979 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18687917 CTGGTCCGAT
*
18687927 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
18687953 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
18687979 C
1 C
18687980 CAAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:18688324 original size:172 final size:171
Alignment explanation
Indices: 18688031--18688344 Score: 432
Period size: 171 Copynumber: 1.8 Consensus size: 171
18688021 CCAGATGGGC
* * *
18688031 GGGATGCGCAACCCAGGGATCGGTCGTGTCCCCCTCTGCGTGCTACCGATCTTGCTGCCACAACC
1 GGGATGCGCAACCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACCACAACC
* * * *
18688096 CTCGGTCCAGTCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTCAGCCAACCGACGAAACGAG
66 CTCAGTCCAGTCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
18688161 CGGGTC-GGCGGGTGGGCGGGAATTACGCCGGCCAGAAAGGT
131 CGGG-CGGGCGGGTGGGCGGGAATTACGCCGGCCAGAAAGGT
* * * * * * * *
18688202 GGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTTTGTGTGCTGCCGATCTTGCTATCGCAACC
1 GGGATGCGCAACCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACCACAACC
** * *
18688267 CTCAGTCTGGTTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGA
66 CTCAGTCCAG-TCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
18688332 GCGGGCGGGCGGG
130 GCGGGCGGGCGGG
18688345 CGGATGGGCA
Statistics
Matches: 122, Mismatches: 19, Indels: 3
0.85 0.13 0.02
Matches are distributed among these distances:
171 62 0.51
172 60 0.49
ACGTcount: A:0.19, C:0.29, G:0.32, T:0.19
Consensus pattern (171 bp):
GGGATGCGCAACCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACCACAACC
CTCAGTCCAGTCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
CGGGCGGGCGGGTGGGCGGGAATTACGCCGGCCAGAAAGGT
Found at i:18688367 original size:172 final size:171
Alignment explanation
Indices: 18688031--18688368 Score: 426
Period size: 172 Copynumber: 2.0 Consensus size: 171
18688021 CCAGATGGGC
* * *
18688031 GGGATGCGCAACCCAGGGATCGGTCGTGTCCCCCTCTGCGTGCTACCGATCTTGCTGCCACAACC
1 GGGATGCGCAACCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACCACAACC
* * * *
18688096 CTCGGTCCAGTCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTCAGCCAACCGACGAAACGAG
66 CTCAGTCCAGTCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * *
18688161 CGGGTCGGCGGGTGGGCGGGAATTACGCCGGCCAGAAAGGT
131 CGGGTCGGCGGGCGGACGGGAACTACGCCGGCCAGAAAGGT
* * * * * * * *
18688202 GGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTTTGTGTGCTGCCGATCTTGCTATCGCAACC
1 GGGATGCGCAACCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACCACAACC
** * *
18688267 CTCAGTCTGGTTCTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGA
66 CTCAGTCCAG-TCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
18688332 GCGGG-CGGGCGGGCGGATGGGCACTACGTCGGCCAGA
130 GCGGGTC-GGCGGGCGGACGGGAACTACGCCGGCCAGA
18688369 GAGATAGGAT
Statistics
Matches: 140, Mismatches: 25, Indels: 3
0.83 0.15 0.02
Matches are distributed among these distances:
171 62 0.44
172 78 0.56
ACGTcount: A:0.19, C:0.29, G:0.33, T:0.19
Consensus pattern (171 bp):
GGGATGCGCAACCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTACCACAACC
CTCAGTCCAGTCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
CGGGTCGGCGGGCGGACGGGAACTACGCCGGCCAGAAAGGT
Found at i:18688921 original size:11 final size:11
Alignment explanation
Indices: 18688901--18688934 Score: 59
Period size: 11 Copynumber: 3.1 Consensus size: 11
18688891 AGTCAGGTTC
18688901 TCCGGCGATGG
1 TCCGGCGATGG
*
18688912 TCCGGTGATGG
1 TCCGGCGATGG
18688923 TCCGGCGATGG
1 TCCGGCGATGG
18688934 T
1 T
18688935 GCCCCGACGA
Statistics
Matches: 21, Mismatches: 2, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
11 21 1.00
ACGTcount: A:0.09, C:0.24, G:0.44, T:0.24
Consensus pattern (11 bp):
TCCGGCGATGG
Found at i:18689042 original size:26 final size:26
Alignment explanation
Indices: 18689013--18689065 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18689003 CTGGTCCGAT
**
18689013 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
*
18689039 CTTAGAGAAGGAATGAACTCCGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
18689065 C
1 C
18689066 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACAAGGAATGAACTCCGTATG
Found at i:18689941 original size:26 final size:26
Alignment explanation
Indices: 18689905--18689957 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18689895 CCGGTCTGAT
*
18689905 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
18689931 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18689957 C
1 C
18689958 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18690833 original size:26 final size:26
Alignment explanation
Indices: 18690795--18690847 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18690785 CCTATCCAAT
*
18690795 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
18690821 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
18690847 C
1 C
18690848 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:18691009 original size:26 final size:26
Alignment explanation
Indices: 18690980--18691030 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
18690970 GGTCTAATCA
18690980 TAGACTGGGAAAGAACTCCGTATGCT
1 TAGACTGGGAAAGAACTCCGTATGCT
*
18691006 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAAAGAACTCCGTATGC
18691031 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.20, G:0.27, T:0.24
Consensus pattern (26 bp):
TAGACTGGGAAAGAACTCCGTATGCT
Found at i:18691905 original size:26 final size:26
Alignment explanation
Indices: 18691865--18691917 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18691855 ACGGTCCGAT
*
18691865 CTTAGACTGGAAATGAACTCTGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
18691891 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
18691917 C
1 C
18691918 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:18692794 original size:26 final size:26
Alignment explanation
Indices: 18692765--18692817 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18692755 CCGGTCCGAT
18692765 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
18692791 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18692817 C
1 C
18692818 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18693231 original size:887 final size:891
Alignment explanation
Indices: 18690951--18698590 Score: 8760
Period size: 903 Copynumber: 8.6 Consensus size: 891
18690941 ACCGATCCTA
* ** * *
18690951 CTGCCGTAACCCAT-GGTCCGGTCTAATCATAGACTGGGAAAGAACTCCGTATGCTTAGACTGGG
1 CTGCCGCAACCC-TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * **
18691015 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCAAGACAG
65 AATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
** * * * * *
18691080 AAGGGATGCGCGAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCCTGTTGCCACAA
130 GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAA
* ** * *
18691145 CCCTCGATCCAATCTGATATTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAACG
195 CCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * *
18691210 AGTGGGCGGGCTGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATTGATTG
260 AGTGGGC--G--GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * *
18691275 ATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
321 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCT
*
18691340 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTTTC
386 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * *
18691405 TATTTTTCATGATTTTTGAAACTTTTTACGGTTC-AGGATTTTTCAAATCTTTTCGGAAGGACTT
451 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GA---TT---ATTTTTTCGGAAGGAGTT
*
18691469 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTA
509 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
18691534 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCAGTTT-AGACACTTTA
574 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTA
* * *
18691598 ATTGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGT
638 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
18691663 TTGATGAGGGATAGGGGACCAATATAAGGGCCAAGTA-CAGCACCCATCGCACATCATGTGTGCA
703 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* ** * ** **
18691727 CA-CCCCCTG--CCCCCGATCATCGGAACCCCAATGTCATCTATCAGGTTCTCC--C-A------
768 CACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCG
* * * *
18691780 -CGATAGTGCCCCGAGGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTG
833 GCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * *
18691838 CTGTCGAAACCCTCGGTACGGTCCGATCTTAGACTGGAAATGAACTCTGTATGCTTAGACTGGGA
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * *
18691903 ATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGC-GGCTGCTCAACCGTCCAGAGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGC-GCTCAGCCGGCCAGAGGG
* * * * * * *
18691967 CCGGGATG-GCAAGCCGGGGATTGGTCGGGTCCCCCTCTGTGTGCTGCCGATCTTGCTGTCGTAA
130 GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAA
* * * *
18692031 -CCTTCAGTCCGGT-TCGATCTTAAACTGGGAATGAACTCCGTATACCTAAGCCAACCGATGAAA
195 CCCTTGA-TCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
18692094 CAAGCGGTCCGACGGGCGGGCGGGCACTACGCCAGCCAGAGAGATGAGATGCGCAAGCCGTGGAT
258 CGAGTGG---G-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * *
18692159 CGATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCGACGTGCCAATGCCATTTTCATGG
319 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGG
* * * * * **
18692224 CTTGTAAATTCATACAATCGTCCCTTAAGCCTTCACGTGAAGTTTCACGACGAGACAACTTATTT
384 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
18692289 TCTATTTTTCACGA-TTTTCAACACTTTTTACGATTCGGGATTTTCTAAAATTTTTTTGGAAGGA
449 TCTATTTTTCACGATTTTTGAA-ACTTTTTACGGTTCGAGA---T-T---ATTTTTTCGGAAGGA
* *
18692353 TTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
506 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
*
18692418 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTT
571 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
*
18692483 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAG
636 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* * *
18692548 GTTTGATAAGGGATAGGGGGCCCATATAAGGGCCAAGTA-CAGCACCCATTGCACATCATGTGCG
701 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
** * *
18692612 CACA-CCCCCTACCCCCCCGATCGCCAGAACCCCAATGTCGCCGGTCAGGTTCTCCGGCGATGCT
766 CACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT
** * *
18692676 CCGGCGATGGTGCCCCGGGGAAGAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTA
831 -CGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
*
18692738 CTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * * * *
18692803 ATGAACTCTGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGCGCTTAGCGGGCCAAAGGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
*
18692868 CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCTGCAAC
131 CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* **
18692933 CCTTGATCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
196 CCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * *
18692998 GTGGGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGAGATGCGCAAGTCGTGGATCGATAGG
261 GTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
* * *
18693063 GTGGTATGTGGGTTTAGGCACATCTTCATATTTCTAGGTGCCAATGCCATTTTCATGGCTTGTAA
326 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAA
18693128 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAA-ACGACTCGTTTTCTATT
391 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC-AAGACGACTCGTTTTCTATT
* * * *
18693192 TTTTATGATTTTCGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTTG
455 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGA----TT---ATTTTTTCGGAAGGAGTTTTGG
* * * *
18693257 CCCCAAACTTGGCAGACGTGATCATTGTATTTTTGTTGGCATGCACAAAAAAACTCAGCCAAAAA
513 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
18693322 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGC
578 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * * * * *
18693387 TATTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCCATGTTTGAC
643 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * * * * *
18693452 AAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATTATGTGCGCATATCC
708 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * ** * * *
18693517 CCCGGCCCTCCCGATCGCCGGAACCCTAATACCATCGGTTAGGTTCTCCGACGATGATCTGGCGA
773 CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC-GGCGA
* * *** * * * *
18693582 AGGTGCCCTGGTAAAGAAAAA-A-GTAGCACGAGCCCATGCTCAAGCCCAGC-TGTG
837 TGGTGCCCCGACGAAGAAAAATACG--GCACCAGCACATGCCCGAGCCCAGCATGTG
* ** * * *
18693636 CTACCGCAATGCTCGATCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGA
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * * * * *
18693701 ATTAACTCTGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGAGCGCTTAACCAGCCAGAGGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * * ** * *
18693766 TGGGATGCACAAGCCAGGGATCGGCCGGGTCCCTCTCTAAGTGCTATCGATCCTGCTACCGCAAC
131 CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* * * * * * *
18693831 CC-TCAGTCCGATCTAATCCTAGACTGGGAATGAACTCTGTATGCCTAAGCCAATCGGCGAAACG
196 CCTTGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * * *
18693895 A----GCGGGCGGGCGGGCATTACGTCGGCCAGAGAGACGAGATGTGCAAGCTGTGGATCGATAG
260 AGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
** *
18693956 CATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTA
325 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTA
* * * *
18694021 AATTCATACAATGGTCCCATAAGCCTTCACGTGAAGTTTCATGGGAAGATGACTCGTTTTCTATA
390 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * *
18694086 TTTCACGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
455 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGA----TT---ATTTTTTCGGAAGGAGTTTTGG
* *
18694151 CCCC-AACTTCGTAGGCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
513 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
18694215 CTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
578 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
18694280 TACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGCTTGAT
643 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* *
18694345 AAGGGATAGGGGGCCAATATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGCACACCC
708 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * *
18694410 CCCGGCCCCCCCGATCGCCGGAACGCAAATGCTGTCGGCCAGGTTCT-C--CGA-------CGAT
773 CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGGCGAT
* *
18694465 GGTGCCCCGACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTA
838 GGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
*
18694519 C-GATCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GG---G-A------ATG---AG-C----
1 CTG-CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
*
18694564 --T----T-CGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAACCGGCCAGA-GG
65 AATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * * * * * * *
18694621 GCTGGGATGC-CAAAACCAGGGATCGGCCGGGTCCCCCTCTGTGTGCAGCCGATCCTACTACCGC
130 GC-GGGATGCGC-AAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGC
* * * * ** *
18694685 TACTCTT-AGTCTGGTCTAATCTTAGACAAGGAATGAACTCCGTATGCCAAAGCCAACCGACG-A
193 AACCCTTGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* *
18694748 A--A-T----GAGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
257 ACGAGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
* * *
18694806 TAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTTTACGTGCCAATTCCATTTTTATGGCTT
322 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTT
*
18694871 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCT
387 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * * *
18694936 ATATTTCATGATTTTTGAAACTTTTTAGGGTTTGGGATTTTTTTAAATTTTTTCGGAAGGAGTTT
452 ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGA-----TT--ATTTTTTCGGAAGGAGTTT
* * *
18695001 GGGCCCC-AACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAA
510 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* *
18695065 AAACTTGAAGTGTACAAGA-TTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
575 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
18695129 GGCTACTGGCAGCAAACCTGTAACATCTCAAATGGTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
640 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
*
18695194 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGCACCCATCGCACATCATGTGCGCACA
705 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
** * * * * * * *
18695259 CCCCCCTGGCCCCCCCGATCATCGAAATCCGAACGCCGCCAGTCAGGTTCTCCGGCAAAGCTCCG
770 CCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT-CG
* * * *
18695324 GCGATGGTGCCTCAACGAAGAAAAATACGACACCCGCACATGCCCGAGCCCAGCATGTG
833 GCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * ** * ** *
18695383 CTGCCGGAACCCTTGGTTTGATTTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGA
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * *
18695448 ATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGCTCAGCCGACCAGAAGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * *** * * **
18695513 CGAGATACGTAAGTCGGGGATCAACCGAGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCATAAC
131 CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* * * *
18695578 CCTTGGTCCGAT-TCGATCTTAGACTAGGAATGAGCTCCGTATGCCTAAGCCAACCGACGAAACG
196 CCTTGATCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * *
18695642 AACGGACGGGCGGGTGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCG
260 -A--G-TGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * * *
18695707 ATAGGGTGGTAGGTGCGTTTAGGCACATCTTCATATTTATACCTACCAATGCCATTTTTATGGCT
321 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCT
* *
18695772 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAGGTTTCATGGCAAGATGACTCGTTTTC
386 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* ** * * *
18695837 TATTTTTGACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCAGAAGGCGTT
451 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGA----TT---ATTTTTTCGGAAGGAGTT
* *
18695902 TTGGCCCTAAACTTGGAAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
509 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
18695967 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGACAAAAAGTGTCCCCATTTCAAACACTTTA
574 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA-AAAAAGTGTCCCCATTTCAGACACTTTA
*
18696032 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGT
638 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * * *
18696097 TTGATGAGGGATACGGGACCAATATAAGGGCTAAGTACTAGCACCCATCGCACATCATGTGCGCA
703 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * *
18696162 CACCCCCCGACCCCCCCGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGG-TATTGCTC
768 CACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA-TGCTC
* * *
18696226 TGGCGATGGTGCCCCGGCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTG
832 -GGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
** * * *
18696287 CTGCCATAATCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGA
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * * * ** *
18696352 ATGAACTTCGTATGCCTAAGTCAACCCATGAAATGAGTGTGCAGGCAC-CTAGCCTACTAGA-GG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTC-AGCCGGCCAGAGGG
* ** * * * * *
18696415 GCGGGATGCGTAAATCGAGGATCGATCGGGTCCCCCTCTGCGTGCTG-CTGATCTTGCTACCGTA
130 GCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTGCCGCA
* * * * *
18696479 ACCCTCGATCCGGTCTGATCTTATACTGGGAATGAACTCTGTATGCCTAAGCCAATCGACGACAC
194 ACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* **
18696544 CAGTGGGCGGGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCTATGGATC
259 GAGTGGGC--G-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * * **
18696609 GATAGGGTGGTAGGTAGATTTAGGCACATCTTCATATTTCTATGTGCCAATGATATTTTTATGGC
320 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGC
* * *
18696674 TTGTAAATTCGTACAATGG-CTCCTTAAGCCCTCACGTGAAGTTTCATGGCAAGACAACTCGTTT
385 TTGTAAATTCATACAATGGTC-CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * *
18696738 TCTATTTTTCACGATTTTTGAAACATTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGAAAGGAG
449 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGA----TT---ATTTTTTCGGAAGGAG
* *
18696803 TTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAATTCAGC
507 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
18696868 TAAAAACTCGAAGTGTACAAGATTTTCG-GACCATTTGAAAAAAATGTCCCTATTTCAGACACTT
572 TAAAAACTCGAAGTGTACAAGATTTT-GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * *
18696932 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGGGTGAGTTGTCGAG
636 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
*
18696997 GTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
701 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * * * * *
18697062 CGCACCCCCCTCGGCCCCCCCGATCGTCAGAACCCCAATGCCGTCGGTTAGGTTCTCCAGTGATG
766 CACA-CCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * *
18697127 CTCCGGTGATGGTGCCCC-AGTGAAGAAAAATACGGCACCAGCACTTGCCCAAGCCCAGCATGTG
829 CT-CGGCGATGGTGCCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
*
18697191 CTGCCACAA-CC-C--T-C-G---G----T---C------TG-A-TCCG-AT-CTTAGACTGGGA
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * *
18697230 ATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAACGTGCGGGTGCTCAGTCGGCCAGAGGGG
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * *
18697295 CGGGATGCGTAAGCCGAGGATCGGTCAGGTCCCCCTCTACGTGTTGTCGATCCTGCTGCCGCAAC
131 CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
* *
18697360 CCTCTGA-CCAGT-TGGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
196 CCT-TGATCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
18697423 GA----ACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATA
259 GAGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* **
18697484 AGGTGGTACCTGGGTTTAGGCACATCTTC--A--TCT---T--C-A---CATTTTTATGGCTTGT
324 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGT
* *
18697536 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGATGACTCGTTTTCTAT
389 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * *
18697601 ATTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTTAAATTTTTTCGAAAGGAGTTTTG
454 TTTTCACGATTTTTGAAACTTTTTACGGTTCGAGA-----TT--ATTTTTTCGGAAGGAGTTTTG
* *
18697666 GCCCC-AACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCATGCA-TAAAAAATTCAGCTAAAA
512 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
18697729 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
577 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * *
18697794 CTACTAGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCTTGAGGCTTGA
642 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * *
18697859 TGAGGGATAGGGGCCCAATATAAGGGCTAAGTACCGGCACCCATCGCACATCATGTGCGCACAAC
707 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-AC
* * * ** ***
18697924 CCCCCGGGTCCCCCCGATCGCCAGAACCCTAATGCTACCAACCAGGTTCT-C--CGA-------C
771 CCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGGC
* * * *
18697979 GATGGTGCCCCGACGAAGAAAAATGCGGCACTAGCACATGTCCGAGCCCAGCATGTA
835 GATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
18698036 CGGTCGCATCCCTCGGTCCGGTCCGATCTTAGACT-GG---G-A------ATG---AG-C-----
1 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* ** *
18698081 -T----T-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GATGCTCAGCCGGCCAGAGGGT
66 ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
* * * * * * *
18698139 TGGGATGC-CAAGGCTGGTGATCGGTCGGGTCCCTCTCTACGTGCTGCCGATCCTGCTGCCGCTA
131 CGGGATGCGCAA-GCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAA
** * * * * *
18698203 GTCTCAGA-CCGGTCTGATCTTAGACAGGTAATGAACTCTGTATGCCAAAGCCAACCGACGAAAT
195 CCCT-TGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA-
* * * *
18698267 GAGCAAGCGGGCGGGCGGTCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATC
257 -A-CGAGTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * * *
18698332 GATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCTGCGTGCCAATTCTATTTTTATGGC
320 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGC
* * * * *
18698397 TTATAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACAACTCATTTT
385 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * *
18698462 CTATTTTTCAGGATTTTTAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGT
450 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGA----TT---ATTTTTTCGGAAGGAGT
*
18698527 TTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
508 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
18698591 ATGCCAGAGG
Statistics
Matches: 5879, Mismatches: 694, Indels: 380
0.85 0.10 0.05
Matches are distributed among these distances:
843 2 0.00
844 119 0.02
845 87 0.01
846 4 0.00
847 2 0.00
848 2 0.00
849 1 0.00
850 2 0.00
851 1 0.00
852 254 0.04
853 337 0.06
854 10 0.00
855 3 0.00
856 244 0.04
857 188 0.03
858 133 0.02
859 10 0.00
861 3 0.00
862 3 0.00
863 2 0.00
864 86 0.01
865 132 0.02
866 38 0.01
867 15 0.00
868 2 0.00
869 4 0.00
871 77 0.01
872 5 0.00
873 1 0.00
875 4 0.00
878 63 0.01
879 114 0.02
880 6 0.00
881 1 0.00
882 43 0.01
883 31 0.01
884 1 0.00
885 12 0.00
886 296 0.05
887 382 0.06
888 2 0.00
889 38 0.01
890 149 0.03
891 8 0.00
892 2 0.00
893 274 0.05
894 234 0.04
895 1 0.00
897 431 0.07
898 265 0.05
899 94 0.02
900 174 0.03
901 113 0.02
902 385 0.07
903 503 0.09
904 327 0.06
905 159 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
CGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAAC
CCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
GTGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCACGATTTTTGAAACTTTTTACGGTTCGAGATTATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCGGCGATGGTGCCCC
GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTG
Found at i:18693692 original size:26 final size:26
Alignment explanation
Indices: 18693663--18693715 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18693653 CTGGTCCGAT
*
18693663 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
18693689 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18693715 C
1 C
18693716 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18695446 original size:26 final size:26
Alignment explanation
Indices: 18695410--18695462 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18695400 TTGATTTGAT
*
18695410 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18695436 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18695462 C
1 C
18695463 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18699001 original size:460 final size:463
Alignment explanation
Indices: 18698219--18699050 Score: 1334
Period size: 460 Copynumber: 1.8 Consensus size: 463
18698209 GACCGGTCTG
* *
18698219 ATCTTAGACAGGTAATGAACTCTGTATGCCAAAGCCAACCGACGAAATGAGCAAGCGGGCGGGCG
1 ATCTTAGACAGGTAATGAACTCCGTATGCCAAAGCCAACCGACGAAA-GAGCAAACGGGCGGGCG
*
18698284 GTCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
65 GGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
18698349 GTTTCGGCACATCTTCATATTTCTGCGTGCCAATTCTATTTTTATGGCTTATAAATTCATATAAT
130 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAAT
* *
18698414 GGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACAACTCATTTTCTATTTTTCAGGATTTT
195 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTCACGATTTT
* *
18698479 TAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
260 CAAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGG
*
18698544 TAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCATGCCAGAGGGGCAGGAT
325 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCATGCCAGAGGGGCAGGAT
18698609 GCACAAGTCGAGGATCGATCGGGTCCCCTCATGCGTGCTGTTGATCCTCCTGCCGTAAAACTCGA
390 GCACAAGTCGAGGATCGATCGGGTCCCCTCATGCGTGCTGTTGATCCTCCTGCCGTAAAACTCGA
18698674 TCCAGTCCA
455 TCCAGTCCA
* * * *
18698683 ATCTTAGGCTAGG-AATGAACTCCGTATGCCTAAGCCAATCGACG-AA-A-CAAACGGGCGGGTG
1 ATCTTAGAC-AGGTAATGAACTCCGTATGCCAAAGCCAACCGACGAAAGAGCAAACGGGCGGGCG
* * *
18698744 GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT-GGAGTGGTCGGTG
65 GGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGG-GTGGTAGGTG
* * *
18698808 GGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
129 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAA
* *
18698873 TGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTT
194 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTCACGATTT
* * * *
18698938 TCAAAACTTTTTTC-GATTTGAGATTTTTTAAAATTTTTTCGGTAGGAGTTTTGACCGCAAACTT
259 TCAAAACTTTTTACAG-TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTT
18699002 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
323 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
18699051 TAAAATCTCG
Statistics
Matches: 337, Mismatches: 28, Indels: 10
0.90 0.07 0.03
Matches are distributed among these distances:
459 3 0.01
460 292 0.87
461 1 0.00
463 2 0.01
464 36 0.11
465 3 0.01
ACGTcount: A:0.25, C:0.20, G:0.24, T:0.31
Consensus pattern (463 bp):
ATCTTAGACAGGTAATGAACTCCGTATGCCAAAGCCAACCGACGAAAGAGCAAACGGGCGGGCGG
GCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAATG
GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTCACGATTTTC
AAAACTTTTTACAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGGT
AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCATGCCAGAGGGGCAGGATG
CACAAGTCGAGGATCGATCGGGTCCCCTCATGCGTGCTGTTGATCCTCCTGCCGTAAAACTCGAT
CCAGTCCA
Found at i:18699429 original size:26 final size:26
Alignment explanation
Indices: 18699400--18699452 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18699390 CTGGTCCGAT
18699400 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18699426 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18699452 C
1 C
18699453 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18700772 original size:435 final size:436
Alignment explanation
Indices: 18699958--18700796 Score: 1288
Period size: 435 Copynumber: 1.9 Consensus size: 436
18699948 AAACTCAAAT
* * * **
18699958 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGC
1 TGTACAAGATTTTGTGACCATTTGAAAAAAATGCCCCCATTTCAGACACTTTAATAACTACTGGC
* *
18700023 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
66 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * ** * *
18700088 AAGGGGGCGAATATAAGGGCCAAGTAGTAGCACCCATCACACATCATGTGCGCACACCCCTCCGG
131 AAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGTGCACACACCCCCCCGG
* * **
18700153 CCCCCCTGATCGTCGAAACCCCAATGCCGCCGGTCAAGTTCTCCGGTGAAGGTGCCCCGACGAAG
196 CCCCCCCGATCATCGAAACCCCAATGCCGCCGGTCAAGTTCTCCGACGAAGGTGCCCCGACGAAG
** * * *
18700218 AAAAATGCGAAACCAGCACATCCCCGAGCCCAGCATGTGCTGTCGCAACCCTCAGTCTGGTCCGA
261 AAAAATGCGAAACCAGCACATCCCCGAGCCCAGCATGTGCTACCGCAACCCTCAGTCCGCTCAGA
* * * * * *
18700283 TCTTCGACTGGGAATGAACTCCGTATGCTTAGACTGGGTATGAACTCTGTATGCCTAAGTCAACC
326 TCTTAGACTGGGAATGAACTCCATAAGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACC
*
18700348 CACGAAACAAGCGTACGGGCGCTCAGTTGGCCAGAAGGGCGGGAAG
391 CACAAAACAAGCGTACGGGCGCTCAGTTGGCCAGAAGGGCGGGAAG
18700394 TGTACAAGATTTTGTGACCATTTGAAAAAAATGCCCCCATTTCAGACACTTTAATAACTACTGGC
1 TGTACAAGATTTTGTGACCATTTGAAAAAAATGCCCCCATTTCAGACACTTTAATAACTACTGGC
* *
18700459 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGTTGTGAGTTTTCGAGGTTTGATGAGGGAT
66 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
*
18700524 -AGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTGCACACACCCCCCCGG
131 AAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGTGCACACACCCCCCCGG
* * * *
18700588 CCCCCCCGATCATCGGAACCCCAATGCCGCTGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAG
196 CCCCCCCGATCATCGAAACCCCAATGCCGCCGGTCAAGTTCTCCGACGAAGGTGCCCCGACGAAG
* *
18700653 AAAAATGC-ATCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTC-GATCCGCTCA
261 AAAAATGCGA-AACCAGCACATCCCCGAGCCCAGCATGTGCTACCGCAACCCTCAG-TCCGCTCA
*
18700716 GATCTTAGACTGGGAATGAACTCCATAAGCTTAGACTAGGAATGAGCTCCGTATGCCTAAGTCAA
324 GATCTTAGACTGGGAATGAACTCCATAAGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAA
18700781 CCCACAAAACAAGCGT
389 CCCACAAAACAAGCGT
18700797 GTGGGTGCTT
Statistics
Matches: 362, Mismatches: 39, Indels: 5
0.89 0.10 0.01
Matches are distributed among these distances:
434 2 0.01
435 239 0.66
436 121 0.33
ACGTcount: A:0.28, C:0.28, G:0.23, T:0.21
Consensus pattern (436 bp):
TGTACAAGATTTTGTGACCATTTGAAAAAAATGCCCCCATTTCAGACACTTTAATAACTACTGGC
AGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
AAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGTGCACACACCCCCCCGG
CCCCCCCGATCATCGAAACCCCAATGCCGCCGGTCAAGTTCTCCGACGAAGGTGCCCCGACGAAG
AAAAATGCGAAACCAGCACATCCCCGAGCCCAGCATGTGCTACCGCAACCCTCAGTCCGCTCAGA
TCTTAGACTGGGAATGAACTCCATAAGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACC
CACAAAACAAGCGTACGGGCGCTCAGTTGGCCAGAAGGGCGGGAAG
Found at i:18701664 original size:26 final size:26
Alignment explanation
Indices: 18701625--18701677 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18701615 CCGATCTGAT
*
18701625 CTTAGACTGTGAATGAACCCCATATG
1 CTTAGACTGGGAATGAACCCCATATG
* *
18701651 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACCCCATATG
18701677 C
1 C
18701678 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACCCCATATG
Found at i:18704375 original size:26 final size:26
Alignment explanation
Indices: 18704336--18704388 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18704326 CTGGTCCGAT
*
18704336 CTTACACTGCGAATGAACTCCATATG
1 CTTACACTGAGAATGAACTCCATATG
*
18704362 CTTAGACTGAGAATGAACTCCATATG
1 CTTACACTGAGAATGAACTCCATATG
18704388 C
1 C
18704389 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
CTTACACTGAGAATGAACTCCATATG
Found at i:18705270 original size:26 final size:26
Alignment explanation
Indices: 18705234--18705286 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18705224 CTGGTCTGAT
18705234 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
* *
18705260 CTTAGACTGGGATTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
18705286 C
1 C
18705287 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:18707238 original size:892 final size:888
Alignment explanation
Indices: 18700390--18708531 Score: 6767
Period size: 883 Copynumber: 9.1 Consensus size: 888
18700380 AGAAGGGCGG
* * **
18700390 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGCCCCCATTTCAGACACTTTAATAACTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * * * *
18700455 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGTTGTGAGTTTTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * *
18700520 GGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTGCACACACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA--CCCC
* * * * *
18700585 CGGCCCCCCCGATCATCGGAACCCCAATGCCG-CTGGTCAGGTTCTCCGACGATGGTGCCCCGAC
194 TGACCCCTCCGATCACCGGAA-CCCAATGCCGTC-GGTCAGGTTCTCCGACGATGGTGCCCCGGC
** * * * *
18700649 GAAGAAAAATGCATCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGATCCG-C
257 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGAT
* * * *
18700713 TCAGATCTTAGACTGGGAATGAACTCCATAAGCTTAGACTAGGAATGAGCTCCGTATGCCTAAGT
322 TC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * * * * *
18700778 CAACCCACAAAACAAGCGTGTGGGTGCTTAGCCAGCCAGAGGGGCGGGATGCACAAGCCGAGGAT
386 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGAT
* * * * * * * *
18700843 CAGTCGGGTCCCCTTTTACGTGCTA-CCGATCCTGCTACCACAACCATCAGTCC-AGTTTGATCT
451 TAGCCAGGTCCCC-TCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCCGA-TCTGATCT
* *
18700906 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCCACGAAACGAGCGGGCGGGCAGGCAGGCG
513 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-GAGCGGGCGGGCGGGCAGGCG
* * * * *
18700971 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTTGGTAGCTTT
577 GACACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
18701036 AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
642 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * *
18701101 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTGTTTTTCATGATTTTTGAA
707 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAA
* * * * **
18701166 ACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAATTTTTTAGA
772 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
18701231 CGTGATCCTTGTATTTTTTTTTTGGCATGCAGAAAACAATTCAGCTAAAAACTC
837 CGTGATCCTTGTA--TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
*
18701285 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
18701350 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* **
18701415 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCACCGCACATCATGTGCGCACACCCCTC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCT-
* * * * *
18701480 GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTTAAACGATACTCTGGCGATG
195 GACCCCTCCGATCACCGGAA-CCCAATGCCGTCGGTCAGG----TT---C--T-C-C-GACGATG
** * * * *
18701545 GTGCCCCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGTTGTCGTAACCC
247 GTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * *
18701610 TCGGTCCGA-TCTGATCTTAGACTGTGAATGAACCCCATATGCTTAGACTGGGAATGAACTCCGT
312 TCGGTCTGATTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * *
18701674 ATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGTGGGATGAGCA
376 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * * * * * * *
18701739 AGCCAGGGA-TCGATCGGGTCCCCTTCTGCGTGCTA-CCGATCCTGTTACCGCAACCCTCCATCC
441 AGTCGGGGATTAG-CCAGGTCCCC-TCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCC
* * * *
18701802 GGTCTGATCTTAGACTGGGTATGAACATC-GTATGGCTAAGCCAACTGACGAAACGAGCGGGCGG
503 GATCTGATCTTAGACTGGGAATGAAC-TCTGTATGCCTAAGCCAACCGACGAAA-GAGCGGGCGG
** * * *
18701866 GCGGGGGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAACGATAGGGTG
566 GC-GGGCAGGCGGACACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
** *
18701931 GTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGAAAATT
630 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATT
* *
18701996 CATACAATGGT-CCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGACGACTCGTTTTCTATTTTTC
695 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTC
* **
18702060 ATGAATTTTT-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCC
760 ATG-ATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * *
18702124 CAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAGTCAGCTAAAAGCTC
824 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
18702189 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTGC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
18702254 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * *
18702318 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGCGCGCACACCCCTC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCT-
** * *** * **
18702383 CCCTGCCCCCCGATTGTCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGGTGCCCCGAT
195 GAC--CCCTCCGATCACCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGC
* * *
18702448 GAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGGGCAGCCGCAA-CC-C--T-TG--
257 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGAT
18702506 --G-TC-----C---G---G---TCCG-AT-CGTT-GACTGGGAATGAACTCCGTATGCCTAAGT
322 TCGATCTTAGACTGGGAATGAACTCCGTATGC-TTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * *
18702551 CAACCCACGAAACGAGCGTGCGGGCACTCAGCTGGCCAGAAGGGCGGGATCCGTAAG-CTGGGGA
386 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGA
* * * ** ** *** *
18702615 -TCGACCGGGTCCCCCTCTGCGTGCTA-TCGATCCTGCTGTCGTAACCCTTGGTTCGATCTGATC
450 TTAG-CCAGGT-CCCCTCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATC
** * * * * * ***
18702678 TTAGACTAAGAATGAACTCCGTATGCCTAAGGCAATCGACTAAACGAGCTGGCTAACGGGC-GGA
512 TTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-GAGCGGGCGGGCGGGCAGG-
* * * * *
18702742 CGGGCAGTACGTCGGCCAGGGAGACGGGATGCGCACA-CCGTGGATCGATTGGGTGGTAGGTGGG
575 CGGACACTACGCCGGCCAGAGAGACGGGATGCGCA-AGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
18702806 TTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCATGTAAATTCATACAATG
639 TTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
18702871 GCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCTTTTTTTATTTTTCACGATTTTT
704 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTT
* * * * ** * * *
18702936 GAAACTTTTTTCGG-TCGAGATTTTTTAAAATCTTTTCAAAAGGATTTTTAGCCCCAAATTTGGT
769 AAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* *
18703000 AGACGCGATCCTTGTATTTTTGTTGGCATGCACAAAAGAATTCAGCTAAAAACT-
834 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
18703054 GAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
1 G-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
18703119 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
65 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* * *
18703184 GGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGCACACCCC-
130 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCT
* ** * *
18703248 GCCCCCTGGGCCCCTCGATCGTCGAAAACCTAATGCCGTCGGTCAGGTTCTCTGACAATGCTCCA
195 GACCCCT------C-CGATCACCG-GAACCCAATGCCGTCGGTCAGGTTCTC---C---G----A
* * * *
18703313 GCGATGGTGCCCCGACGAGGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCG
242 -CGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * *
18703378 CAACCCTCGGTCCG-GTCTGATCATAGACTGGGAATAAACTCCGTATGCTTAAACTGGGAATGAA
306 CAACCCTCGGTCTGATTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * * * ** * * *
18703442 CTCCGTATGCCTATGCCAACCGATGAAAGGAGCGGGCAAGTAG-T-ACGTCGGCCAGAGAGACGG
370 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGGCGCTCA-GCCGGCCAGAGGGGCGG
* ** * ** ** * * * *
18703505 GATGCGCAAGCCATGGA-TCGATAGGGT--GGT-AG-GTG--G--G-T--T--TAGGCAC-AGCT
433 GATGCGCAAGTCGGGGATTAGCCA-GGTCCCCTCTGCGTGCAGCCGATCCTGCTA-CCACAACCC
** * * * * * * *** *
18703555 TC-AT---AT-T--TC-T--ACGTGCCAATGCAA-TTTTTACGGCT-TGTACATTTGTAC-AATG
496 TCAATCCGATCTGATCTTAGAC-TGGGAATG-AACTCTGTATGCCTAAG-CCAACCG-ACGAAAG
**** * *** * * ** * ** ** *** *
18703607 -GTCCCTTGAGCCTTCA--CGTGA-AGTTTC-ATGGCAAGATGACTCGTTTTCTATTTTTCATGT
557 AG-CGGGCGGGCGGGCAGGCG-GACA-CTACGCCGGCCAGA-GAGACG----GGA-TGCGCAAG-
*** * * *** * ** ** ** * *
18703667 TTTTCGAAAC-ATTTTGCGGTTCAGGAT-TTTTTA-AAATTTTTTCGAAAATATTT-T-TG-GCC
612 CCGT-GGATCGATAGGGTGG-T-AGG-TGGGTTTAGGCACATCTTC----ATATTTCTGCGTGCC
* * * * * **
18703726 TCATGATCCTTGTATTTTTGTTGGCATGCGTAAA---A-A-AAT--TCAGCTAAAAAC-T--C--
669 -AATG--CC----ATTTTT-ATGGC-T-TGTAAATTCATACAATGGTC-CCTTAAGCCTTCACGT
* * **** * *** ** * * * * *
18703779 GAAGTGTACAAGATTTTG-TGAC-CATTTGAAAAAAGTGTCCTCA-TTTCAAACACTTTAGTG-G
723 GAAGT-TTCATG-GCAAGACGACTCATTT--TCTATTTTTCATGATTTTTAAA-ACTTT-TTGCG
* * *** * * * ** * * * *** ** *
18703840 CTACTGGCAGCAAACCTGTAGAATCTCAATTGCTCTTTAAGGGGTTGTGAGTTCTTGAGGTTTG-
782 GTTC-GG--G--ATTTTTTAAAAT-T---TT-TTC-GGAAGGAGTTTTG-G-CCCCAAACTTGGT
* **** * * ** * * * *** *
18703904 ATGA-GGGATAGGGGGCCAATATAAG--GGCCAAGTACCAGCACCCA-TC-GC---ACA-T-
834 A-GACGTGAT-CCTTG--TATTTTTGTTGG-CATGCA-CA-AAAAAATTCAGCTAAAAACTC
* ** ******** ** * ***** * * ** * *
18703956 GATGTGCGCACA-CCCCCCCAACCCCTCGATCGCCCGGGTCCCCCTCTTC-G-TGCTGTTGAT-C
1 GAAGTGTACA-AGATTTTGTGACCATTTGA-AAAAAGTGTCCCCAT-TTCAGACACT-TTAATGG
* * ** *** * ** **
18704017 CTACTGCCA-CAACCCT-T--GGTC-CGGTCTGATC-TTAGACTGGGAAGGAACTCCGTATGCCT
62 CTACTGGCAGCAAACCTGTAAAATCTC-AAATGCTCTTTA-A--GGG--GG-TGTGAGT-T--CT
* * * ** * **** * *
18704076 AAGCCAACCG-ATGAAACGAGCGGACGGGCGGGGGGGCGGGCACTACGTCGGCCAGAGAGACGGG
117 ----CAA-GGTTTG--ATGAG-GGA-----TAGGGGGC---CAATATAAGGGCCA-AG-TAC--C
* * * * * * * *
18704140 ATGTGTAAGCTGCGAAT-CGATAGGGTGTTAGGTGGGTTTAG-GGACACCCCCCGACCCCCCCGA
162 A---G-CA-C--CCATTGC-ACA-----TCA--T--G--T-GCGCACA-CCCCTGACCCCTCCGA
* * * *
18704203 TCACCGGAACCCCAATGCCGTCGATGAGGTTCTCCGGCGATGCTCTGGTGATGGTGCCCAGACGA
206 TCACCGGAA-CCCAATGCCGTCGGTCAGGTTCT-C--CGA----C----GATGGTGCCCCGGCGA
* * * * * *
18704268 AGAAAAATACAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCC
259 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATTC
* * * * *
18704333 GATCTTACACTGCGAATGAACTCCATATGCTTAGACTGAGAATGAACTCCATATGCCTAAGTCAA
324 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * ** * *
18704398 CCCACGAAACGAGCGTGTGGGCGCTCAGCTGGCCAGAGGGGTAGGATGAGCAAG-CTGGGGA-TC
389 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATTA
* * * *
18704461 GTCCAGGTCCCCCTGTGCATGCTA-TCGATCCTGCTACCACAACCCTCCATCC-AGTCTGATCTT
453 G-CCAGGT-CCCCTCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCCGA-TCTGATCTT
* * ** * * *
18704524 AGACTGCGTATGAACTCTGTATGCCTAAGCCAATTGATGAAACGAGCGGGCGGGTGGGCA---AG
514 AGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-GAGCGGGCGGGCGGGCAGGCGG
* * *
18704586 -CACTATGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGAACGATAGGGTGGTAGGT-GGTTTA
578 ACACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
18704649 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
643 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
18704714 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAA
708 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAA
* * * *
18704779 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGATGGAGTCTTT-GCCCCAAACTTGGTAAA
773 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT-TTTGGCCCCAAACTTGGTAGA
* *
18704843 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTTAGCTAAAAACTC
837 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
18704895 AAAGTGTTCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
**
18704960 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* *
18705025 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACACCATGAGCGCACACCCCCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA-CCCCT
* * * * *
18705090 GGCCCCCCCGATCATCAGAACCTCAATGCCGTCAGTCAGGTTCTCCGACGATGCTCCGGTGATGG
195 GACCCCTCCGATCACCGGAACC-CAATGCCGTCGGTCAGGTTCT-C--CGA-----C---GATGG
* * * * * *
18705155 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGGATGTGTTGTCACAACCCT
248 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
18705220 CGGTCTG-GTCTGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGATTGAACTCCGTA
313 CGGTCTGATTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * *
18705284 TGCCTAGGTCAACTCACGAAACGAGCGTGCAGGCGTTCAGTCGGCCAGAGGGGCGGGATAGTC-A
377 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT-G-CGC
* * * * * * * * *
18705348 AAAT-GGGGA-TCGACCAGGTGCCCCTCCGCATGCTGCCGATCCTGCTGCCGCAACCCTCGATCT
440 AAGTCGGGGATTAG-CCAGGT-CCCCTCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCC
* * * *
18705411 GGTCTGATCTTAGCCTGGGAATGAACT-TCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGG
503 GATCTGATCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGACGAAA-GAGCGGGCGG
* ** *
18705475 GCGGGCAGGCGGGA-ACTACGCCGACTGGAGAGACGGGATGCGCAAGCCAG-GGATCGAAAGGGT
566 GCGGGCAGGC-GGACACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC-GTGGATCGATAGGGT
*
18705538 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
629 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAAT
* * *
18705603 ACATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
694 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTT
* * * * *
18705668 CACGATTTTTTAAACTTTTTGCCGTTAGGGA-TTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCC
759 CATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* *
18705732 CAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTG
824 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * *
18705797 GAAGTTTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
18705862 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * *
18705927 GGATTGGGGGCCAATATAAGGGCCAAGTACCAGGACCCATCAG-ACATCATGTGCGCACACCCC-
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT-TGCACATCATGTGCGCACACCCCT
* * *
18705990 --CCCGAT-CG-TCA---GAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGGTG
195 GACCC-CTCCGATCACCGGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGCG
* *
18706048 AAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATC
258 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATT
* * **
18706113 CGATCTTATACTGGGAATGAACTCTGTATGCTTAGACTAAGAATGAACTCCGTATGCCTAAGTCA
323 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
18706178 ACCCGA-GAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCAGGGATC
388 ACCC-ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATT
** * * ** * *
18706242 AGCTGGGTCCCGCTCTACGTGCTGTTGATCCTGCTGCCATAACCCTCAATCCGATCTGATCTTAG
452 AGCCAGGTCCC-CTCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAG
* *
18706307 ACTGGGAATGAACT-TCGTATGCCTAAGCCAACTGACGAAATGAGCGGGTGGGCGGGCAGGCGGA
516 ACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGACGAAA-GAGCGGGCGGGCGGGCAGGCGGA
* * *
18706371 CACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAG
579 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
18706436 GCACATCTTAATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
644 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * *
18706501 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTCTTAATGATTTTTGAAAC
709 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAAC
* ** *
18706566 TTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTTTTTTGGCCCCAAACTAGGTAGACG
774 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * *
18706631 TGATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTCAGCTAAAAACTT
839 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* **
18706681 GAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCTTATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
18706746 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCAAGGTTTCATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
*
18706811 GGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCACCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACC-CCT
* * * *
18706876 GACCCCTCCGATCACCGGAACTTCAATACCGTCGGTCAGGTTCTCCGACGATGGTGCCCTGGTGA
195 GACCCCTCCGATCACCGGAAC-CCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGCGA
* * * * * *
18706941 AGAGAAATACGGCACTAGCACATGCTCGAGCCCAGCATGTACTGCCACAACCCTC-GTCTCGATT
259 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GATT
* *
18707005 CGATCTTATATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
323 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
18707070 ACCCATGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGATGGGCGGGATGCGCAAGTCGAGGATTG
388 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATTA
* * * ** * * **
18707135 GTCGGGTCCCCTTCTACGTGCAGCCGATCCTGCTACCACAACCCTCGGTCTGACCCAATCTTAGA
453 GCCAGGTCCCC-TCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAGA
* *
18707200 CTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-A----------GAGCAGGCGGGCAC
517 CTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAAGAGCGGGCGGGCGGGCAGGCGGACAC
*
18707254 TACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
582 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* ** *
18707319 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATTATCCTTTA
647 CATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
*
18707384 AGCCTTCACGTGAAGTTTCATGGCGAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTT
712 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTT
* * * * *
18707449 TTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGA
777 TTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* *
18707514 TCCTTGTATTTTTGTTGGCAAGCACAAAAAAATTCAGCTAAAAACTT
842 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
18707561 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
18707626 TGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* ***
18707691 GGATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATCATACATCATGTGCGCACAACCCCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCAC-ACCCCT
* * * * *
18707756 CCCAGCCCC-CCGATCACCGGAACCCGATGTCGCTGGTCAGCTTCTCCGGCGATGCTCCGACGAT
195 --GA-CCCCTCCGATCACCGGAACCCAATG-C-C--GTC-G---GT-CAG-G-TTCTCCGACGAT
*** * * * *
18707820 GGTGCGTTGGCGAAGAAAAATGCGGCACCAGCACAAGCTCGAGCCTAGCATGTGCTGCTGCAACC
246 GGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-C
18707885 CTCGGTCCGGTCCAATCTCAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGT
310 C-C--T-CGG-------T----CT--G-AT----TC-G-AT-CTTAGACTGGGAATGAACTCCGT
* * * * * *
18707950 ATGCTTAGACTGGGAATGAACTTCGTACGCCTAAGTCAACCTACGAAACGAGCATACGGGCAC-C
350 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * *
18708014 AAGCCGGCCAGAGGGGCGGGATGCACAAGTTGGGGATTAGCCAGGTCCCCCTCTGCGTACTA-CC
415 -AGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATTAGCCAGGT-CCCCTCTGCGTGC-AGCC
* * * * * * *
18708078 GATCCTGCT-GC-TAACCCTCAGTCCGGTTTGACCTTAGATTGGGAATGAACTCTGTATGCCTAA
477 GATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAA
* * *
18708141 GCCAACCGAAGAAACGAGTGGGCGGGCGGGC--G-GG-CACTACACCGGCCAGAGAGACGGGATG
542 GCCAACCGACGAAA-GAGCGGGCGGGCGGGCAGGCGGACACTACGCCGGCCAGAGAGACGGGATG
* *
18708202 CGCAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTGTGTGCCAA
606 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
*
18708267 TGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
671 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * ** * *
18708332 AAGATGACCCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGGGGTTCGGGATTTTTTAAAAT
736 AAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAAT
* * * *
18708397 TTTTTCGGATGGAATTTTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCTTGCA
801 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
*
18708462 CAAAAAAATTCAACTAAAAACTC
866 CAAAAAAATTCAGCTAAAAACTC
* *
18708485 GAAGTGTAAAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
18708532 GATCGCAACC
Statistics
Matches: 5870, Mismatches: 982, Indels: 761
0.77 0.13 0.10
Matches are distributed among these distances:
863 3 0.00
865 5 0.00
866 323 0.06
867 323 0.06
868 8 0.00
869 3 0.00
870 30 0.01
871 2 0.00
872 1 0.00
873 1 0.00
875 1 0.00
876 1 0.00
878 1 0.00
880 473 0.08
881 77 0.01
882 36 0.01
883 478 0.08
884 289 0.05
885 11 0.00
886 6 0.00
887 4 0.00
888 14 0.00
889 25 0.00
890 26 0.00
891 29 0.00
892 363 0.06
893 86 0.01
894 68 0.01
895 182 0.03
896 8 0.00
897 31 0.01
898 340 0.06
899 9 0.00
900 12 0.00
901 36 0.01
902 337 0.06
903 248 0.04
904 141 0.02
905 52 0.01
906 414 0.07
907 217 0.04
908 4 0.00
909 12 0.00
910 3 0.00
911 7 0.00
912 4 0.00
913 1 0.00
915 2 0.00
916 57 0.01
917 10 0.00
918 135 0.02
919 7 0.00
920 18 0.00
921 2 0.00
922 2 0.00
923 6 0.00
924 327 0.06
925 2 0.00
926 1 0.00
927 1 0.00
928 7 0.00
929 5 0.00
930 3 0.00
931 7 0.00
932 1 0.00
933 8 0.00
934 7 0.00
935 11 0.00
936 13 0.00
937 208 0.04
938 28 0.00
939 31 0.01
940 9 0.00
941 9 0.00
942 15 0.00
943 20 0.00
944 12 0.00
945 6 0.00
946 12 0.00
947 4 0.00
948 20 0.00
949 23 0.00
950 21 0.00
951 11 0.00
952 8 0.00
953 4 0.00
954 2 0.00
955 1 0.00
956 1 0.00
958 7 0.00
959 11 0.00
960 20 0.00
961 9 0.00
962 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (888 bp):
GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCTG
ACCCCTCCGATCACCGGAACCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGCGAAG
AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATTCGA
TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATTAGCC
AGGTCCCCTCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAGACTGG
GAATGAACTCTGTATGCCTAAGCCAACCGACGAAAGAGCGGGCGGGCGGGCAGGCGGACACTACG
CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
TTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
TTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGC
GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
Found at i:18707548 original size:880 final size:879
Alignment explanation
Indices: 18700390--18708531 Score: 6538
Period size: 880 Copynumber: 9.1 Consensus size: 879
18700380 AGAAGGGCGG
* * **
18700390 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGCCCCCATTTCAGACACTTTAATAACTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * * * *
18700455 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGAGGTTGTGAGTTTTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * *
18700520 GGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTGCACACACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA--CCCC
* * * * *
18700585 CGGCCCCCCCGATCATCGGAACCCCAATGCCG-CTGGTCAGGTTCTCCGACGATGGTGCCCCGAC
194 TGACCCCTCCGATCACCGGAA-CCCAATGCCGTC-GGTCAGGTTCTCCGACGATGGTGCCCCGGC
** * * * *
18700649 GAAGAAAAATGCATCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGATCCG-C
257 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGAT
* * * *
18700713 TCAGATCTTAGACTGGGAATGAACTCCATAAGCTTAGACTAGGAATGAGCTCCGTATGCCTAAGT
322 TC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * * * * *
18700778 CAACCCACAAAACAAGCGTGTGGGTGCTTAGCCAGCCAGAGGGGCGGGATGCACAAGCCGAGGAT
386 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGAT
* * * * * * * *
18700843 CAGTCGGGTCCCCTTTTACGTGCTA-CCGATCCTGCTACCACAACCATCAGTCC-AGTTTGATCT
451 TAGCCAGGTCCCC-TCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCCGA-TCTGATCT
*
18700906 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCCACGAAACGAGCGGGCGGGCAGGCAGGCG
513 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-GA-------GG--GGCAGGCG
* * * *
18700971 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTTGGTAGCTTT
568 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
18701036 AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
633 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * *
18701101 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTGTTTTTCATGATTTTTGAA
698 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAA
* * * * **
18701166 ACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAATTTTTTAGA
763 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
18701231 CGTGATCCTTGTATTTTTTTTTTGGCATGCAGAAAACAATTCAGCTAAAAACTC
828 CGTGATCCTTGTA--TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
*
18701285 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
18701350 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* **
18701415 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCACCGCACATCATGTGCGCACACCCCTC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCT-
* * * * *
18701480 GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTTAAACGATACTCTGGCGATG
195 GACCCCTCCGATCACCGGAA-CCCAATGCCGTCGGTCAGG----TT---C--T-C-C-GACGATG
** * * * *
18701545 GTGCCCCGATGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGTTGTCGTAACCC
247 GTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * *
18701610 TCGGTCCGA-TCTGATCTTAGACTGTGAATGAACCCCATATGCTTAGACTGGGAATGAACTCCGT
312 TCGGTCTGATTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * *
18701674 ATGCCTAAGTCAACCCATGGAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGTGGGATGAGCA
376 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * * * * * * *
18701739 AGCCAGGGA-TCGATCGGGTCCCCTTCTGCGTGCTA-CCGATCCTGTTACCGCAACCCTCCATCC
441 AGTCGGGGATTAG-CCAGGTCCCC-TCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCC
* * * *
18701802 GGTCTGATCTTAGACTGGGTATGAACATC-GTATGGCTAAGCCAACTGACGAAACGAGCGGGCGG
503 GATCTGATCTTAGACTGGGAATGAAC-TCTGTATGCCTAAGCCAACCGACGAAA-GA----G-GG
* * *
18701866 GCGGGGGGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAACGATAGGGTG
561 GC-----AGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
** *
18701931 GTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGAAAATT
621 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATT
* *
18701996 CATACAATGGT-CCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGACGACTCGTTTTCTATTTTTC
686 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTC
* **
18702060 ATGAATTTTT-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCC
751 ATG-ATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * *
18702124 CAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAGTCAGCTAAAAGCTC
815 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
18702189 GAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTGC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
18702254 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * *
18702318 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGCGCGCACACCCCTC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCT-
** * *** * **
18702383 CCCTGCCCCCCGATTGTCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGGTGCCCCGAT
195 GAC--CCCTCCGATCACCGGAA-CCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGC
* * *
18702448 GAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGGGCAGCCGCAA-CC-C--T-TG--
257 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGAT
18702506 --G-TC-----C---G---G---TCCG-AT-CGTT-GACTGGGAATGAACTCCGTATGCCTAAGT
322 TCGATCTTAGACTGGGAATGAACTCCGTATGC-TTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * *
18702551 CAACCCACGAAACGAGCGTGCGGGCACTCAGCTGGCCAGAAGGGCGGGATCCGTAAG-CTGGGGA
386 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGA
* * * ** ** *** *
18702615 -TCGACCGGGTCCCCCTCTGCGTGCTA-TCGATCCTGCTGTCGTAACCCTTGGTTCGATCTGATC
450 TTAG-CCAGGT-CCCCTCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATC
** * * * * *
18702678 TTAGACTAAGAATGAACTCCGTATGCCTAAGGCAATCGACTAAACGAGCTGGCTAACGGGCGGAC
512 TTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-GAG-GGGC--A-----GG-C
* * * *
18702743 GGGCAGTACGTCGGCCAGGGAGACGGGATGCGCACA-CCGTGGATCGATTGGGTGGTAGGTGGGT
567 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCA-AGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
18702807 TTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCATGTAAATTCATACAATGG
631 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * * *
18702872 CCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCTTTTTTTATTTTTCACGATTTTTG
696 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTA
* * * ** * * *
18702937 AAACTTTTTTCGG-TCGAGATTTTTTAAAATCTTTTCAAAAGGATTTTTAGCCCCAAATTTGGTA
761 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
18703001 GACGCGATCCTTGTATTTTTGTTGGCATGCACAAAAGAATTCAGCTAAAAACT-
826 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
18703054 GAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
1 G-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
18703119 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
65 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* * *
18703184 GGGATTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGCACACCCC-
130 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCT
* ** * *
18703248 GCCCCCTGGGCCCCTCGATCGTCGAAAACCTAATGCCGTCGGTCAGGTTCTCTGACAATGCTCCA
195 GACCCCT------C-CGATCACCG-GAACCCAATGCCGTCGGTCAGGTTCTC---C---G----A
* * * *
18703313 GCGATGGTGCCCCGACGAGGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCG
242 -CGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * *
18703378 CAACCCTCGGTCCG-GTCTGATCATAGACTGGGAATAAACTCCGTATGCTTAAACTGGGAATGAA
306 CAACCCTCGGTCTGATTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * * * ** * * *
18703442 CTCCGTATGCCTATGCCAACCGATGAAAGGAGCGGGCAAGTAG-T-ACGTCGGCCAGAGAGACGG
370 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGGCGCTCA-GCCGGCCAGAGGGGCGG
* ** * ** ****** * ** * * *** *
18703505 GATGCGCAAGCCATGGA-TCGATAGGGTGGTAGGTGGGTTTAGGCAC-A-GCTTCATATTTCTA-
433 GATGCGCAAGTCGGGGATTAGCCA-GGTCCCCTCTGCGTGCA-GC-CGATCCTGC-TACCACAAC
* * * * * * * ** * * * **
18703566 CGTGCCAATGCAAT-T--T-TTACGGCTTGTACATTTGTACAATG-GTCCCTTGAGCC-TTC-AC
494 CCT--CAATCCGATCTGATCTTA-GACTGGGA-A--TGAACTCTGTATGCC-TAAGCCAACCGAC
** *** * **** * ***** * *** * *
18703624 GTGA-AGTTTCATGGCAAGATG-ACT-CGTTTTCTATTTTTCATGTTTTTCG-AA-AC----AT-
552 GAAAGAGGGGCA-GGC--G-GGCACTACGCCGGCCA-GAGAGACGGGATGCGCAAGCCGTGGATC
* * ** ** ** * * *
18703679 -TTTGCGGT--TCAGGAT-TTTTTA-AAATTTTTTCGAAAATATTT-T-TG-GCCTCATGATCCT
612 GATAG-GGTGGT-AGG-TGGGTTTAGGCACATCTTC----ATATTTCTGCGTGCC-AATG--CC-
* * * * ** *
18703736 TGTATTTTTGTTGGCATGCGTAAA---A-A-AAT--TCAGCTAAAAAC-T--C--GAAGTGTACA
666 ---ATTTTT-ATGGC-T-TGTAAATTCATACAATGGTC-CCTTAAGCCTTCACGTGAAGT-TTCA
* **** * *** ** * * * * * * *
18703789 AGATTTTG-TGAC-CATTTGAAAAAAGTGTCCTCA-TTTCAAACACTTTAGTG-GCTACTGGCAG
723 TG-GCAAGACGACTCATTT--TCTATTTTTCATGATTTTTAAA-ACTTT-TTGCGGTTC-GG--G
*** * * * ** * * * *** ** * *
18703850 CAAACCTGTAGAATCTCAATTGCTCTTTAAGGGGTTGTGAGTTCTTGAGGTTTG-ATGA-GGGAT
780 --ATTTTTTAAAAT-T---TT-TTC-GGAAGGAGTTTTG-G-CCCCAAACTTGGTA-GACGTGAT
**** * * ** * * * *** *
18703913 AGGGGGCCAATATAAG--GGCCAAGTACCAGCACCCA-TC-GC---ACA-T-
834 -CCTTG--TATTTTTGTTGG-CATGCA-CA-AAAAAATTCAGCTAAAAACTC
* ** ******** ** * ***** * * ** * *
18703956 GATGTGCGCACA-CCCCCCCAACCCCTCGATCGCCCGGGTCCCCCTCTTC-G-TGCTGTTGAT-C
1 GAAGTGTACA-AGATTTTGTGACCATTTGA-AAAAAGTGTCCCCAT-TTCAGACACT-TTAATGG
* * ** *** * ** **
18704017 CTACTGCCA-CAACCCT-T--GGTC-CGGTCTGATC-TTAGACTGGGAAGGAACTCCGTATGCCT
62 CTACTGGCAGCAAACCTGTAAAATCTC-AAATGCTCTTTA-A--GGG--GG-TGTGAGT-T--CT
* * * ** * **** * *
18704076 AAGCCAACCG-ATGAAACGAGCGGACGGGCGGGGGGGCGGGCACTACGTCGGCCAGAGAGACGGG
117 ----CAA-GGTTTG--ATGAG-GGA-----TAGGGGGC---CAATATAAGGGCCA-AG-TAC--C
* * * * * * * *
18704140 ATGTGTAAGCTGCGAAT-CGATAGGGTGTTAGGTGGGTTTAG-GGACACCCCCCGACCCCCCCGA
162 A---G-CA-C--CCATTGC-ACA-----TCA--T--G--T-GCGCACA-CCCCTGACCCCTCCGA
* * * *
18704203 TCACCGGAACCCCAATGCCGTCGATGAGGTTCTCCGGCGATGCTCTGGTGATGGTGCCCAGACGA
206 TCACCGGAA-CCCAATGCCGTCGGTCAGGTTCT-C--CGA----C----GATGGTGCCCCGGCGA
* * * * * *
18704268 AGAAAAATACAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCC
259 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATTC
* * * * *
18704333 GATCTTACACTGCGAATGAACTCCATATGCTTAGACTGAGAATGAACTCCATATGCCTAAGTCAA
324 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * ** * *
18704398 CCCACGAAACGAGCGTGTGGGCGCTCAGCTGGCCAGAGGGGTAGGATGAGCAAG-CTGGGGA-TC
389 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATTA
* * * *
18704461 GTCCAGGTCCCCCTGTGCATGCTA-TCGATCCTGCTACCACAACCCTCCATCC-AGTCTGATCTT
453 G-CCAGGT-CCCCTCTGCGTGC-AGCCGATCCTGCTACCACAACCCTCAATCCGA-TCTGATCTT
* * ** * * *
18704524 AGACTGCGTATGAACTCTGTATGCCTAAGCCAATTGATGAAACGAGCGGGCGGGTGGGCAAGCAC
514 AGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-GAG-GGGCAGG-CGG---GCAC
* * *
18704589 TATGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGAACGATAGGGTGGTAGGT-GGTTTAGGCA
573 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*
18704653 CATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
638 CATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
*
18704718 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAACTTT
703 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTT
* * * *
18704783 TTACGGTTCGAGATTTTTTAAAATTTTTTCGGATGGAGTCTTT-GCCCCAAACTTGGTAAACGTG
768 TTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT-TTTGGCCCCAAACTTGGTAGACGTG
* *
18704847 ATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTTAGCTAAAAACTC
832 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
18704895 AAAGTGTTCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
**
18704960 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* *
18705025 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACACCATGAGCGCACACCCCCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA-CCCCT
* * * * *
18705090 GGCCCCCCCGATCATCAGAACCTCAATGCCGTCAGTCAGGTTCTCCGACGATGCTCCGGTGATGG
195 GACCCCTCCGATCACCGGAACC-CAATGCCGTCGGTCAGGTTCT-C--CGA-----C---GATGG
* * * * * *
18705155 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGGATGTGTTGTCACAACCCT
248 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
18705220 CGGTCTG-GTCTGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGATTGAACTCCGTA
313 CGGTCTGATTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * *
18705284 TGCCTAGGTCAACTCACGAAACGAGCGTGCAGGCGTTCAGTCGGCCAGAGGGGCGGGATAGTC-A
377 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT-G-CGC
* * * * * * * * *
18705348 AAAT-GGGGA-TCGACCAGGTGCCCCTCCGCATGCTGCCGATCCTGCTGCCGCAACCCTCGATCT
440 AAGTCGGGGATTAG-CCAGGT-CCCCTCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCC
* * *
18705411 GGTCTGATCTTAGCCTGGGAATGAACT-TCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGG
503 GATCTGATCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGACGAAA-GA--------
* * ** *
18705475 GCGGGCAGGCGGGAACTACGCCGACTGGAGAGACGGGATGCGCAAGCCAG-GGATCGAAAGGGTG
558 G-GGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC-GTGGATCGATAGGGTG
* *
18705539 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATA
621 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATT
* *
18705604 CATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
686 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTC
* * * * *
18705669 ACGATTTTTTAAACTTTTTGCCGTTAGGGA-TTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCC
751 ATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* *
18705733 AAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTG
816 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * *
18705797 GAAGTTTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
18705862 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * *
18705927 GGATTGGGGGCCAATATAAGGGCCAAGTACCAGGACCCATCAG-ACATCATGTGCGCACACCCC-
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT-TGCACATCATGTGCGCACACCCCT
* * *
18705990 --CCCGAT-CG-TCA---GAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGGTG
195 GACCC-CTCCGATCACCGGAACCC-AATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGCG
* *
18706048 AAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATC
258 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATT
* * **
18706113 CGATCTTATACTGGGAATGAACTCTGTATGCTTAGACTAAGAATGAACTCCGTATGCCTAAGTCA
323 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
18706178 ACCCGA-GAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCAGGGATC
388 ACCC-ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATT
** * * ** * *
18706242 AGCTGGGTCCCGCTCTACGTGCTGTTGATCCTGCTGCCATAACCCTCAATCCGATCTGATCTTAG
452 AGCCAGGTCCC-CTCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAG
* *
18706307 ACTGGGAATGAACT-TCGTATGCCTAAGCCAACTGACGAAATGAGCGGGTGGGCGGGCAGGCGGA
516 ACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGACGAAA-GA--------G-GGGCAGGCGGG
* * *
18706371 CACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAG
570 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
18706436 GCACATCTTAATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
635 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * *
18706501 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTCTTAATGATTTTTGAAAC
700 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAAC
* ** *
18706566 TTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGTTTTTTGGCCCCAAACTAGGTAGACG
765 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * *
18706631 TGATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTCAGCTAAAAACTT
830 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* **
18706681 GAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCTTATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
18706746 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCAAGGTTTCATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
*
18706811 GGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCACCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACC-CCT
* * * *
18706876 GACCCCTCCGATCACCGGAACTTCAATACCGTCGGTCAGGTTCTCCGACGATGGTGCCCTGGTGA
195 GACCCCTCCGATCACCGGAAC-CCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGCGA
* * * * * *
18706941 AGAGAAATACGGCACTAGCACATGCTCGAGCCCAGCATGTACTGCCACAACCCTC-GTCTCGATT
259 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCT-GATT
* *
18707005 CGATCTTATATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
323 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
18707070 ACCCATGAAACGAGCGTGCGGGCGCTCAGCCAGCCAGATGGGCGGGATGCGCAAGTCGAGGATTG
388 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATTA
* * * ** * * **
18707135 GTCGGGTCCCCTTCTACGTGCAGCCGATCCTGCTACCACAACCCTCGGTCTGACCCAATCTTAGA
453 GCCAGGTCCCC-TCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAGA
*
18707200 CTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAA-A-GAGCAGGCGGGCACTACGCCGGC
517 CTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAAGAGGGGCAGGCGGGCACTACGCCGGC
*
18707263 CAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
582 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* ** *
18707328 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATTATCCTTTAAGCCTTCAC
647 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * *
18707393 GTGAAGTTTCATGGCGAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTT
712 GTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTC
* * *
18707458 GGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTAT
777 GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* *
18707523 TTTTGTTGGCAAGCACAAAAAAATTCAGCTAAAAACTT
842 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
18707561 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
18707626 TGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* ***
18707691 GGATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATCATACATCATGTGCGCACAACCCCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCAC-ACCCCT
* * * * *
18707756 CCCAGCCCC-CCGATCACCGGAACCCGATGTCGCTGGTCAGCTTCTCCGGCGATGCTCCGACGAT
195 --GA-CCCCTCCGATCACCGGAACCCAATG-C-C--GTC-G---GT-CAG-G-TTCTCCGACGAT
*** * * * *
18707820 GGTGCGTTGGCGAAGAAAAATGCGGCACCAGCACAAGCTCGAGCCTAGCATGTGCTGCTGCAACC
246 GGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-C
18707885 CTCGGTCCGGTCCAATCTCAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGT
310 C-C--T-CGG-------T----CT--G-AT----TC-G-AT-CTTAGACTGGGAATGAACTCCGT
* * * * * *
18707950 ATGCTTAGACTGGGAATGAACTTCGTACGCCTAAGTCAACCTACGAAACGAGCATACGGGCAC-C
350 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * *
18708014 AAGCCGGCCAGAGGGGCGGGATGCACAAGTTGGGGATTAGCCAGGTCCCCCTCTGCGTACTA-CC
415 -AGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATTAGCCAGGT-CCCCTCTGCGTGC-AGCC
* * * * * * *
18708078 GATCCTGCT-GC-TAACCCTCAGTCCGGTTTGACCTTAGATTGGGAATGAACTCTGTATGCCTAA
477 GATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAA
* * *
18708141 GCCAACCGAAGAAACGAGTGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCA
542 GCCAACCGACGAAA-GA----G-GGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
18708206 AGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCC
601 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
18708271 ATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
666 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * ** * *
18708336 TGACCCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGGGGTTCGGGATTTTTTAAAATTTTT
731 CGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
* * * *
18708401 TCGGATGGAATTTTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTTTGTTGGCTTGCACAAA
796 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
18708466 AAAATTCAACTAAAAACTC
861 AAAATTCAGCTAAAAACTC
* *
18708485 GAAGTGTAAAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTC
1 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
18708532 GATCGCAACC
Statistics
Matches: 5852, Mismatches: 998, Indels: 765
0.77 0.13 0.10
Matches are distributed among these distances:
863 8 0.00
865 5 0.00
866 320 0.05
867 317 0.05
868 8 0.00
869 3 0.00
870 30 0.01
871 2 0.00
872 1 0.00
873 1 0.00
875 1 0.00
876 1 0.00
878 1 0.00
880 473 0.08
881 69 0.01
882 25 0.00
883 472 0.08
884 272 0.05
885 6 0.00
886 3 0.00
887 1 0.00
888 6 0.00
889 20 0.00
890 29 0.00
891 32 0.01
892 364 0.06
893 82 0.01
894 67 0.01
895 181 0.03
896 11 0.00
897 38 0.01
898 334 0.06
899 10 0.00
900 12 0.00
901 37 0.01
902 337 0.06
903 252 0.04
904 146 0.02
905 60 0.01
906 425 0.07
907 225 0.04
908 18 0.00
909 12 0.00
910 3 0.00
911 7 0.00
912 4 0.00
913 1 0.00
915 2 0.00
916 57 0.01
917 10 0.00
918 135 0.02
919 7 0.00
920 18 0.00
921 2 0.00
922 2 0.00
923 6 0.00
924 336 0.06
927 1 0.00
928 4 0.00
929 5 0.00
930 3 0.00
931 7 0.00
932 1 0.00
933 8 0.00
934 7 0.00
935 12 0.00
936 30 0.01
937 218 0.04
938 41 0.01
939 37 0.01
940 15 0.00
941 10 0.00
942 21 0.00
943 25 0.00
944 13 0.00
945 6 0.00
946 11 0.00
947 3 0.00
948 21 0.00
949 25 0.00
950 20 0.00
951 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (879 bp):
GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCTG
ACCCCTCCGATCACCGGAACCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGCGAAG
AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATTCGA
TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATTAGCC
AGGTCCCCTCTGCGTGCAGCCGATCCTGCTACCACAACCCTCAATCCGATCTGATCTTAGACTGG
GAATGAACTCTGTATGCCTAAGCCAACCGACGAAAGAGGGGCAGGCGGGCACTACGCCGGCCAGA
GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
CTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
AGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGA
TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
GTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
Found at i:18707940 original size:26 final size:26
Alignment explanation
Indices: 18707904--18707976 Score: 128
Period size: 26 Copynumber: 2.8 Consensus size: 26
18707894 GTCCAATCTC
*
18707904 AGACTGGGAATGAACTCTGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
18707930 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
*
18707956 AGACTGGGAATGAACTTCGTA
1 AGACTGGGAATGAACTCCGTA
18707977 CGCCTAAGTC
Statistics
Matches: 45, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.29, C:0.16, G:0.27, T:0.27
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:18710067 original size:26 final size:26
Alignment explanation
Indices: 18710038--18710090 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18710028 CCGGTCTGAT
18710038 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* * *
18710064 CTTAGATTGTGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18710090 C
1 C
18710091 CTAAGTGAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18711528 original size:903 final size:896
Alignment explanation
Indices: 18709795--18712993 Score: 4088
Period size: 929 Copynumber: 3.5 Consensus size: 896
18709785 TAAATTCATA
* *
18709795 TTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAAGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
18709859 AGCACCCACCGCACATCATGTGTGCACACCCCCCTGGCCCCTCCGATCACCGAAACCCCATTGCC
66 AGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCACCGAAACCCCAATGCC
* * ** * * *
18709924 GTCGGTCAGGTTATCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCTCCAGC
130 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGC
* ** *
18709989 ACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
195 ACATGCCCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGA
* * * * * *
18710054 ACTCCGTATGCTTAGATTGTGAATGAAC-TCTGTATGCCTAAGTGAACCCACGAAACGAGTGTGC
260 ACTCCGTATGCATAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCACAAAACGAGCGTGC
* * *
18710118 GGGCGCTCAA-CCGGCCAGAGGGGCAGGATGCACAAGTCGGGGATC-GACCGGGT-CCCTTGCTG
324 GGGCGCT-AAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGGA-CAGGTCCCCCT-CTG
* *** * ** ** * * *
18710180 TGTGCTGTTGATCCTACTATCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAA-TTCC
386 CGTGCTACCGATCCTGCTGCCACAACCCTCGATCCGGTTTGATCTTAGACTGGGAATGAACTT-C
* *
18710244 GTATGCCTAAGCCAACCGACGAAACGAGCGGG-T------TGGCACTACGCCGCCTAGAGAGACG
450 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCTGGCGGCGGGCACTACGCAGCC-AGAGAGACG
*
18710302 GGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
514 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
18710367 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
579 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * * *
18710432 ATGGCAAGATGACTCGTTTTCTATTTTTTATGATTTTTGAAACTTTTGGA-GGTTCGGGATTTTT
644 ATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTT-TACGGTTCGGGATTTTT
* *
18710496 TAAAA-TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTG
708 TAAAATTTTTTTGGAAA-GACTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTG
*
18710560 GCATGCACAAAAGAATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTGACCATTTGAAAAAAG
772 GCATGCACAAAAAAATTCAGCTAAAAACTCGA-GTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * *
18710625 TGTCCCAATTTCAGACACTTTAATGGCTACTGGGAACAAACCTGTAAAATCTCAAATGCTC
836 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
18710686 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTCCC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
18710751 AGCACCCATCGCACATCATATGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATACCG
66 AGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGAAACCCCAATGCCG
* *
18710816 CCAGTCAGGTTCCCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
131 CCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
* * * * * *
18710881 TATGTCCGAGCCCAGCATGTGCTATCACAACCCTCGGTCTGGTCCAATCTTAGATTGGGAATGAA
196 CATGCCCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* * * * *
18710946 CTCCGTTTGCATGGACTAGGAATGAACTTCGTATGTCTAAGTCAACCCACAAAACGAGCGTCCGG
261 CTCCGTATGCATAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGG
* * * *
18711011 GCGCTCAGCCGGCCAGAGGGGC-GAGATGCGCAAGCCGGGGATCGGACGGGTCCCCTTCTGCGTG
326 GCGCTAAGCCGGCCAGAGGGGCAG-GATGCACAAGCCGGGGATCGGACAGGTCCCCCTCTGCGTG
* * * *
18711075 CTACCGATCCTGTTGCCACAACCCTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTTCATATG
390 CTACCGATCCTGCTGCCACAACCCTCGATCCGGTTTGATCTTAGACTGGGAATGAACTTCGTATG
*
18711140 CCTAAGCCAACCGACGAAACGAGCAGGCGGGCTGGCGGGCGGGCACTACGCTAGCCAGAGAGACA
455 CCTAAGCCAACCGACGAAAC--G-A-GCGGGCTGGC-GGCGGGCACTACGC-AGCCAGAGAGACG
*
18711205 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCGCAT
514 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
*
18711270 GCCAATGCCATTTTTATGACTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
579 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
** * *
18711335 ATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACTGTTTGGGATTTTTT
644 ATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT
*
18711400 AAAATTTTTTTGGAAAGACTTTTGGCCCCAAACTTGGTAGACATGATCCTCGTATTTTTGTTGGC
709 AAAATTTTTTTGGAAAGACTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGC
*
18711465 ATGCGCAAAAAAATTCAGCTAAAAACTCGTAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
774 ATGCACAAAAAAATTCAGCTAAAAACTCG-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
18711530 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
838 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * *
18711589 TCTGAGGGGGTGTGACTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
** * ** * *
18711654 AGCACCCATCATACATCATGTGCGCACAACCGTCCCCCCGG-CACCCCGATCGTCGGAA-CCCGA
66 AGCACCCATCGCACATCATGTGCGCAC-A----CCCCCCGGCCCCCCCGATCACCGAAACCCCAA
* * ** * * * *** *
18711717 TGTCGCTGGTCAACTTTTTCCGACGATGCTCTGACGATGGTACGTTGGCAAAGAAAAATGCGGCA
126 TGCCGCCGGTC-AGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCA
*** * *
18711782 CCAGCACATGTTAGAGCCTAGCATGTGCTG-CTGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
190 CCAGCACATGCCCGAGCCCAGCATGTGCTGTC-ACAACCCTCGGTCCGGTCCGATCTTAGACTGG
* *
18711846 GAATGAACTCTGTATGCTTAGACTCTGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCAT
254 GAATGAACTC------C---G----T--ATG-----C--A----TAGACTGGGAATGAACTTCGT
* * * * * * *
18711911 ACGCCTAAGTCAACCTACAAAACGAGCGTGTGGACGCTAAGCCAGCCAGAGGGGCGGGATGCGCA
293 ATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTAAGCCGGCCAGAGGGGCAGGATGCACA
** * * * * *
18711976 AGCCGGGGATTAGCCAGGTCCCCCTCTGCATGCTACCGATGCTGCTGCTACAACCCTCAATCCGG
358 AGCCGGGGATCGGACAGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCACAACCCTCGATCCGG
* * * * * *
18712041 TTTGACCTTAGATTAGGAATGAAC-TCTGTATGCCTAAGCCAACCGAAGAAACGAGTGGGCGGGC
423 TTTGATCTTAGACTGGGAATGAACTTC-GTATGCCTAAGCCAACCGACGAAACGAGCGGGCTGGC
* *
18712105 GGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGTTG
487 GG-CGGGCACTACG-CAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
**
18712170 GGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
550 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
18712235 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTT
615 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTT
* * * * *
18712300 TTGAAACTTTTTGCGGTTCGGGATTTTTTTAAATTTTTTTGGGAGGATTTTTGGCCCCAAACTTG
680 TTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAAGACTTTTGGCCCCAAACTTG
* * * * *
18712365 GTATACATGATCCTTGTATTTTTCTTGGCATGCATAAAAAAATTCAGGTAAAAACTCGAAGCGTA
745 GTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG-AGTGTA
* * *
18712430 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATAGCTACTGGTAGCA
809 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
18712495 AACCTGTAAAATCTCAAATGCTC
874 AACCTGTAAAATCTCAAATGCTC
*
18712518 TTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
1 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
18712583 AGTACCCATCGCACATCATGTGCGCACAACCCCTGGCCCCCCCGATCACCAAAACCCCAATGCCG
66 AGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGAAACCCCAATGCCG
* * * * ***
18712648 TCGGTTAGGTTCTCCGACGATGCTCTGATGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCA
131 CCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
* * * *
18712713 CATGCCCAAGCCCAGCATGTGCTGTCAGAACCCTCGGTTCGGTCCGAGCTTAGACTGGGAATGAA
196 CATGCCCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* * *
18712778 CTCCGTATGCTTAGACTGGGAATGAACTTCGTATGGCTAAGTCAACCCACGAAACGAGCGTGCGG
261 CTCCGTATGCATAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGG
* *
18712843 GCGCTAAGCCGGCCAGAGGGGCAGGATGCACAAGACGAGGATCGG-CTAGGTCCCCCTCTAG-GT
326 GCGCTAAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGGAC-AGGTCCCCCTCT-GCGT
* * * * *
18712906 GCTGCTGATCCTGCTGCCACAACCCTCCATCCGATTTGATCTT-GACTGGGAATGAACTCCGTAT
389 GCTACCGATCCTGCTGCCACAACCCTCGATCCGGTTTGATCTTAGACTGGGAATGAACTTCGTAT
*
18712970 GCCTAA-CTCAACCCACGAAACGAG
454 GCCTAAGC-CAACCGACGAAACGAG
18712994 GGTACCGGTG
Statistics
Matches: 2001, Mismatches: 240, Indels: 127
0.85 0.10 0.05
Matches are distributed among these distances:
890 2 0.00
891 311 0.16
892 98 0.05
893 1 0.00
894 1 0.00
895 5 0.00
896 1 0.00
897 1 0.00
898 37 0.02
899 134 0.07
900 1 0.00
902 1 0.00
903 451 0.23
904 15 0.01
905 1 0.00
906 12 0.01
907 121 0.06
908 8 0.00
910 3 0.00
912 1 0.00
913 1 0.00
916 2 0.00
919 1 0.00
920 1 0.00
922 2 0.00
924 6 0.00
925 118 0.06
926 12 0.01
927 1 0.00
928 3 0.00
929 474 0.24
930 2 0.00
931 1 0.00
932 2 0.00
933 169 0.08
934 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (896 bp):
TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
AGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCACCGAAACCCCAATGCCG
CCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
CATGCCCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
CTCCGTATGCATAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGG
GCGCTAAGCCGGCCAGAGGGGCAGGATGCACAAGCCGGGGATCGGACAGGTCCCCCTCTGCGTGC
TACCGATCCTGCTGCCACAACCCTCGATCCGGTTTGATCTTAGACTGGGAATGAACTTCGTATGC
CTAAGCCAACCGACGAAACGAGCGGGCTGGCGGCGGGCACTACGCAGCCAGAGAGACGGGATGCG
CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
GACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
TTTTGGAAAGACTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACA
AAAAAATTCAGCTAAAAACTCGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
Found at i:18711875 original size:26 final size:26
Alignment explanation
Indices: 18711836--18711908 Score: 119
Period size: 26 Copynumber: 2.8 Consensus size: 26
18711826 CCGGTCCGAT
*
18711836 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
**
18711862 CTTAGACTCTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18711888 CTTAGACTGGGAATGAACTCC
1 CTTAGACTGGGAATGAACTCC
18711909 ATACGCCTAA
Statistics
Matches: 42, Mismatches: 5, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 42 1.00
ACGTcount: A:0.27, C:0.21, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18712789 original size:26 final size:26
Alignment explanation
Indices: 18712760--18712812 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18712750 TTCGGTCCGA
18712760 GCTTAGACTGGGAATGAACTCCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
*
18712786 GCTTAGACTGGGAATGAACTTCGTAT
1 GCTTAGACTGGGAATGAACTCCGTAT
18712812 G
1 G
18712813 GCTAAGTCAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
GCTTAGACTGGGAATGAACTCCGTAT
Found at i:18713088 original size:158 final size:159
Alignment explanation
Indices: 18712787--18713134 Score: 371
Period size: 158 Copynumber: 2.2 Consensus size: 159
18712777 ACTCCGTATG
* * * * *
18712787 CTTAGACTGGGAATGAACTTCGTATGGCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTAAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGAGCGTACCGGCGCTAAGC
* *
18712852 CGGCCAGAGGGGCAGGATGCACAAGACGAGGATCGGCTAGGTCCCCCTCTAGGTGCTGCTGATCC
66 CGGCCAGAGGGGCAGGATGCACAAGACGAGGATCGGCGAGGTCCCCCTCTAGGTGCTGCCGATCC
* * *
18712917 TGCTGCCACAACCCTCCATCCGATTTGAT
131 TACTGCCACAACCCTCCATCCGATCTAAT
* *
18712946 CTT-GACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGAGGGTACCGGTGCTCAA-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGAGCGTACCGGCGCT-AAG
* * ** * * * * *
18713009 CCGGCCAGAGGTGCGGGATGTGCAAGCCGGGGATCGATCGA-GTCCCCTTCT-GCGTGTTGCCGA
65 CCGGCCAGAGGGGCAGGATGCACAAGACGAGGATCG-GCGAGGTCCCCCTCTAG-GTGCTGCCGA
* ** ** * *
18713072 TCCTACTGTCGTAACCCTCGGTCTGGTCTAAT
128 TCCTACTGCCACAACCCTCCATCCGATCTAAT
* *
18713104 CTTAGATTGGGAATGAACTCCATATGCCTAA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAA
18713135 GCCAACCGAC
Statistics
Matches: 155, Mismatches: 30, Indels: 8
0.80 0.16 0.04
Matches are distributed among these distances:
157 1 0.01
158 122 0.79
159 32 0.21
ACGTcount: A:0.23, C:0.28, G:0.28, T:0.21
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGAAACGAGCGTACCGGCGCTAAGC
CGGCCAGAGGGGCAGGATGCACAAGACGAGGATCGGCGAGGTCCCCCTCTAGGTGCTGCCGATCC
TACTGCCACAACCCTCCATCCGATCTAAT
Found at i:18715567 original size:26 final size:26
Alignment explanation
Indices: 18715516--18715568 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18715506 CCGATCCGAT
*
18715516 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
18715542 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
18715568 C
1 C
18715569 CTAAGTCATC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18717864 original size:901 final size:898
Alignment explanation
Indices: 18714799--18718234 Score: 4535
Period size: 906 Copynumber: 3.8 Consensus size: 898
18714789 CTGATCGATC
* * *
18714799 TTAGACTGGGAATGAACTCCGTATGGCTAAGCTAACCGACGAAACGAGCAGGCGGACGGGCAGGC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGATCA---GGACGGGCAGGC
* * *
18714864 GGGCACTACGCTGGCCAGAGAGACGAGATGCGCAAGCCGTCGATCGATAGGGTGGTATGTGGGTT
63 GGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*
18714929 TAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
128 TAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
*
18714994 CCCTTAAGCCTTGACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAA
193 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAA
* * *
18715059 AAC-TTTTGTAGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTCAGCCCCAAACTTGGTAG
258 AACTTTTTGCAGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAG
* * *
18715123 ACATGATCCTTGTATTTTTATTTGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAG
323 ACGTGATCCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAG
* *
18715188 TTTTTATGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCAAACC
388 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCAAACC
* *
18715253 TGTAAAATCTCAAATGCTCTTTAAAGGGGTATGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
453 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
18715318 AATATAAGGGCCAAGTACCAGCACACATCGCACATCATGTGCGCACACCCCTCCCAGCCCCCCCG
518 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCC-GCCCCCCCG
* * * *
18715383 ATCGCCGAAACCCCAATGTCGCCGGTCAAGTTCTCTGACGATGCTCCGGCGATGGTGCCCC-AGC
581 ATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA-C
* * * *
18715447 GAAGAAAAATGTGG-ACCAGCACATGCCCGAGCCTAGCATATGCTGCTGCAACCCTCGGTCCGAT
645 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTACCGCAACCCTCGGTCCGAT
**
18715511 CCGATCTTAGACTGGGAATGAACTCTATATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTC
710 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * *
18715576 ATCCCGCGAAAAGAGCGTACGGGCGCTCAGCTGGCCAGATGGGCGGGATGCGCAAGTCGAGGATC
775 A-CCCACGAAAAGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATC
* * * * * * ** * *
18715641 GACCGGGTCCCCATCTATATGCTGCCGATCCTGTTGTTGCAACCCTCAATCCGGTCTGATC
839 GATCGGGTCCCCCTCTGTGTGCT-CTGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATA
* ** *
18715702 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGTGGGAGGGTGGGT
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-----T--CAGGACGGGC
* ** * *
18715767 GGGCGGGCACTACATCGGTC-GAGAGACGAGATGCGCGAGCCGTGGATCGATAGGGTGGTAGGTG
59 AGGCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * **
18715831 GGTTTAGGCACAACTTCATATTTGTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
124 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
18715896 TGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTAATGATTT
189 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
** *
18715961 TTGAAACTTTTTGCAGTTCGGGATTTTTTAAAATTCTTTT-GGAAGGAGTTTTATCCCCAAACTT
254 TCAAAACTTTTTGCAGTTCGGGATTTTTTAAAATT-TTTTCGGAAGGAGTTTTAGCCCCAAACTT
* * *
18716025 GGTAGACCTGATCCTTGTATTTTT-TCTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
318 GGTAGACGTGATCCTTGTATTTTTGT-TCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTG
*
18716089 TACAAGTTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAG
382 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAG
*
18716154 -AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAG
447 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
*
18716218 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACTCCCCCCGGCC
512 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCCGCCC
* * * * ** *
18716283 CCCCGATCGCCGGAACCCCAATGTCGCTGGTTAGGTTCTCCGGTGATGCT-CAAGCGATGGTGCC
576 CCCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCC
* * * * *
18716347 TCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTAC-AGTCGCAACCCTCGG
640 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTA-CCGCAACCCTCGG
* * * * *
18716411 TCCGGTCCGATTTTAGACTGGGAATGAACTCGGTAAGCTTAGACTGGGAATGAACTCCGTATGCC
704 TCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCC
* * * * * *
18716476 TAAGTCAACCCACGAAACGAGCGTACGGGAGATC-GGCGGACCAGAGGGGTGGGATGTGTAAGCT
769 TAAGTC-ACCCACGAAAAGAGCGTACGGGCGCTCAGCCGG-CCAGAGGGGTGGGATGCGTAAGCC
** * * * * * *
18716540 GGGGATCGATCGGGTCCTTCTATGTGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCTGGTCTA
832 GGGGATCGATCGGGTCCCCCTCTGTGTGCTCT-GATCCTGCTGCCGCAACCCTCGATCCGGTCTG
*
18716605 AAA
896 ATA
* * * * * *
18716608 TTAGACTAGGAATGAACTCCATATGCCTAACCCAACCGAC-AAA--AT-AAG-CAGGCGGGCGGG
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGATCAGGACGGGCAGGCGGG
* * * *
18716668 CACTACGCCGACCAGAGAAACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
18716733 GCACATCTTTATATTTTTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCT
131 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * *
18716798 TTAAGCCTTCACGTGAAGATTCATGGTAAGACGACTTGTTTTCCATTTTTCATGATTTTCAAAAC
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC
* * *
18716863 TTTTTGCTA-TTCGGGATTTTTTAAAATTTTCTCGAAAGGAGTTTTAGCCTCAAACTTGGTAGAC
261 TTTTTGC-AGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGAC
* **
18716927 GTGATCCTTGTATTTTTGTTGGCATGCATGAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
325 GTGATCCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
* *
18716992 TTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
390 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCAAACCTG
* *
18717057 TAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA
455 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *
18717122 AATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCTCCCAGCCCCCCCGAT
520 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCC-GCCCCCCCGAT
* * * *
18717187 CGTCGGAACCCCAATGCCGCCGCTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACAAA
583 CGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
* * * *
18717252 GAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATATGCTACCAG-AACACTCAGTCTGATCC
648 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTACC-GCAACCCTCGGTCCGATCC
*
18717316 GATCTCT-GACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCATATGCCTAAGTCG
712 GATCT-TAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTC-
* * * *
18717380 ACCCACGAAATGAGCGTACGGGCGCTCAGCCAGCCATAGGGGTGCGATGCGTAAGCCGGGGATCG
775 ACCCACGAAAAGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCG
* * * * * * *
18717445 GTTGGGTCCCCCTCTGCGTGCTACTGATCCTGCTGCCACAACCCTCGATCCGATCCGATG
840 ATCGGGTCCCCCTCTGTGTGCT-CTGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATA
** ** *
18717505 TTAGTTTGGGAATGAACTTTGTATGCCTAAGCCAACCGACGAAACGATCA-GACGGGCAGCCGGG
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGATCAGGACGGGCAGGCGGG
* *
18717569 CACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
18717634 GCACATCTTCATATTTCTGCATGCTAATGCCATTTTTATGGCTTTTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
18717699 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATGATTTTCAAAAC
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC
** * * * * * *
18717764 TTTTTGTTGTTTGAGATTTTTTAAAATTTTTTCGGAAGAAGTTTTGGCCCCAAAATTGGAAGACG
261 TTTTTGCAGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACG
* * **
18717829 TGATCCTTGTATGTTTGTTCG-AGTGCACAAAAAAATTCAGCCAAAAACTTGAAGTGTACAAGAT
326 TGATCCTTGTATTTTTGTTCGCA-TGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
* * *
18717893 TTTGTGACCATTTGAAAAAAGTGTCTCCATTTCAGACACTTTAATGGCTGCTGGCAGCAAACCTG
390 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCAAACCTG
* * *
18717958 TAAAATCTCAAATTCTCTTTAAGGGGGTGTGATTTCTCGAGGATTGATGAGGGATAGGGGGCCAA
455 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
** * * *
18718023 TATAAGGGCCAAGTACCAGCACTAATCGCACATCACGTGTGCACACCCCCCTCGACCCCCCGATC
520 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CGCCCCCCCGATC
** * * * * *
18718088 ATCGAAACCCCAATGCCGTCGGTCAGG-T-T----C--T--T-CGGCGATGGTGGCCCGGCAAAG
584 GCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG
* * ** * *
18718142 AAAATTGCGGCACCAGCACATGCCCAAGCCCAATATGTGCTGCCGCAACCC-CTGGTCC-AGTCC
649 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTACCGCAACCCTC-GGTCCGA-TCC
*
18718205 GATCTTAGATTGGGAATGAACTCCGTATGC
712 GATCTTAGACTGGGAATGAACTCCGTATGC
18718235 CTAAGTCAAC
Statistics
Matches: 2228, Mismatches: 262, Indels: 100
0.86 0.10 0.04
Matches are distributed among these distances:
888 4 0.00
889 93 0.04
890 1 0.00
892 1 0.00
894 22 0.01
895 337 0.15
896 119 0.05
897 296 0.13
898 14 0.01
899 1 0.00
900 40 0.02
901 463 0.21
903 46 0.02
904 1 0.00
905 76 0.03
906 515 0.23
907 194 0.09
908 4 0.00
910 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGATCAGGACGGGCAGGCGGG
CACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC
TTTTTGCAGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACG
TGATCCTTGTATTTTTGTTCGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCCGATCGC
CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAA
AAATGCGGCACCAGCACATGCCCGAGCCCAGCATATGCTACCGCAACCCTCGGTCCGATCCGATC
TTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCACCCAC
GAAAAGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGATCGGG
TCCCCCTCTGTGTGCTCTGATCCTGCTGCCGCAACCCTCGATCCGGTCTGATA
Found at i:18718871 original size:26 final size:26
Alignment explanation
Indices: 18718842--18718891 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
18718832 CCGATCCGAT
*
18718842 CTTAGACTGGGAATGAACTCCGTAGG
1 CTTAGACTGGGAATAAACTCCGTAGG
18718868 CTTAGACTGGGAATAAACTCCGTA
1 CTTAGACTGGGAATAAACTCCGTA
18718892 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTAGG
Found at i:18719766 original size:26 final size:26
Alignment explanation
Indices: 18719737--18719789 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18719727 CTGATCCGAT
18719737 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18719763 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18719789 C
1 C
18719790 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18720516 original size:747 final size:748
Alignment explanation
Indices: 18719082--18720561 Score: 2286
Period size: 747 Copynumber: 2.0 Consensus size: 748
18719072 CGAACGAGCG
* *
18719082 GGCGGGCACTATACCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGAGTGGTAGGTGG
1 GGCGGGCACTACACCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAGAGTGGTAGGTGG
** *
18719147 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
66 GTTTAGGCACATCTTCATATTTCTGCATGAAAATGCCATTTTTATGGCTTGTAAATTCAAACAAT
*
18719212 GGTCCCTTAAGCCTTCACGTGAGGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACAATTAT
131 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACAATTAT
* * * *
18719277 TGAAACTTTTTACGGTTTGTGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTTG
196 TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTAGGCCCCAAACTTGG
* * *
18719342 TAGACGTCATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTTGAAATGTAC
261 TAGACGTCATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAATGTAC
* *
18719407 AAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATACTTTAATGGCTATTGGCAGCAA
326 AAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
18719472 ACCTGTAAAATCTCACATGCTCTTTAAGCGGGTGTGAATTCTCGAGGTTTGATGAGGGATAGGTG
391 ACCTGTAAAACCTCAAATGCTCTTTAAGCGGGTGTGAATTCTCGAGGTTTGATGAGGGATAGGGG
*
18719537 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCTCCCC
456 GCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACACCCCCCGACCTCCCC
* *
18719602 GATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGCTCTAGTGATGGTGCCCCGGC
521 GATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGCTCCAGTGATGGTGCCCCGAC
* * * *
18719667 GAAGAAAAATGCGGCACCAGCACATGTCCGAGCCCCACATGTGTTACCGCAACCCTCGATCTGAT
586 GAAGAAAAATGCGGCACCAGCACAAGCCCGAGCCCCACATGTGCTACCGCAACCCTCGATCCGAT
* *
18719732 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
651 CCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTC
18719797 AACCCACGAAATGAGCGTGTGGGCGGGCGGGCA
716 AACCCACGAAATGAGCGTGTGGGCGGGCGGGCA
* * * ** *
18719830 GGCGGGCACTACGCCGGCGAGAGAGATGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGG
1 GGCGGGCACTACACCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAGAGTGGTAGGTGG
* * **
18719895 GTTTAGGTACATCTTCATATTTTTGTGTGAAAATGCCATTTTTATGGCTTGTAAATTCAAACAAT
66 GTTTAGGCACATCTTCATATTTCTGCATGAAAATGCCATTTTTATGGCTTGTAAATTCAAACAAT
** *
18719960 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTT
131 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACAATTAT
* * **
18720025 TGAAAC-TTTTGCTGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTAGGCCCCAAACTTGG
196 TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTAGGCCCCAAACTTGG
* * **
18720089 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGATGTGTAC
261 TAGACGTCATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAATGTAC
* *
18720154 AAGATTTTGTGACCATTTTAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
326 AAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
18720219 ACCTGTAAAACCTTAAATGCTCTTTAAG-GCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
391 ACCTGTAAAACCTCAAATGCTCTTTAAGCG-GGTGTGAATTCTCGAGGTTTGATGAGGGATAGGG
* *
18720283 GGCCAATATAAGGGCCAAGTACCAGCAACCATCTCACATCATGTGCGCACACCCCCCCAGGCC-C
455 GGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACA-CCCCCC-GACCTC
* * * * * * *
18720347 CCCGATTGCCGGAACCCTAATGCTGTCAGTTAGGTTCTCC-AGTGATGCTCCGGTGATGGTGCCC
518 CCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGA-CGATGCTCCAGTGATGGTGCCC
* ** *
18720411 CGACGAAG-AAAATGTGGCACCAGCACAAGCCCGAGCCCGGCATGTGCTACCGCAACCCTCGGTC
582 CGACGAAGAAAAATGCGGCACCAGCACAAGCCCGAGCCCCACATGTGCTACCGCAACCCTCGATC
* *
18720475 CGGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTA
647 CGATCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTA
18720540 AGTCAACCCACGAAATGAGCGT
712 AGTCAACCCACGAAATGAGCGT
18720562 ACGGGCGCTC
Statistics
Matches: 661, Mismatches: 67, Indels: 9
0.90 0.09 0.01
Matches are distributed among these distances:
746 1 0.00
747 407 0.62
748 250 0.38
749 3 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.28
Consensus pattern (748 bp):
GGCGGGCACTACACCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAGAGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCTGCATGAAAATGCCATTTTTATGGCTTGTAAATTCAAACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACAATTAT
TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGAGTTTAGGCCCCAAACTTGG
TAGACGTCATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAATGTAC
AAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAACCTCAAATGCTCTTTAAGCGGGTGTGAATTCTCGAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACACCCCCCGACCTCCCC
GATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGCTCCAGTGATGGTGCCCCGAC
GAAGAAAAATGCGGCACCAGCACAAGCCCGAGCCCCACATGTGCTACCGCAACCCTCGATCCGAT
CCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTC
AACCCACGAAATGAGCGTGTGGGCGGGCGGGCA
Found at i:18720520 original size:26 final size:26
Alignment explanation
Indices: 18720484--18720536 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18720474 CCGGTCTGAT
18720484 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
18720510 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
18720536 C
1 C
18720537 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18722688 original size:879 final size:883
Alignment explanation
Indices: 18719763--18723412 Score: 4275
Period size: 868 Copynumber: 4.1 Consensus size: 883
18719753 ACTCCGTATG
* ** **
18719763 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACG-AA--A-CAAG-GGGCGGGCGGG
* * * * *
18719828 CAGGCGGGCACTACGCCGGCGAGAGAGATGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGGT
61 CGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* * * ** *
18719893 GGGTTTAGGTACATCTTCATATTTTTGTGTGAAAATGCCATTTTTATGGCTTGTAAATTCAAACA
126 GGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
18719958 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATT
191 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATATTTCATGATT
* *
18720023 TTTGAAAC-TTTTGCTGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTAGGCCCCAAACTT
256 TTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * * *
18720087 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGATGTGT
321 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGGACAAAAAAATTCAGCTAAAAACTCGAAGTGT
*
18720152 ACAAGATTTTGTGACCATTTTAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
386 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
18720217 AAACCTGTAAAACCTTAAATGCTCTTTAAGGCGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
451 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* *
18720282 GGGCCAATATAAGGGCCAAGTACCAGCAACCATCTCACATCATGTGCGCACACCCCCCCAGGCCC
516 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC--G---
* * * ** *
18720347 CCCGATTGCCGGAACCCTAATGCTGTCAGTTAGGTTCTCCAGTGATGCTCCGGTGATGGTGCCCC
575 ACCGACT--CGGAACCCCAATGC---C-G-CCGG---T-CAG-G-TTCTCCGGTGATGGTGCCCC
* * * * *
18720412 GACG-AAGAAAATGTGGCACCAGCACAAGCCCGAGCCCGGCATGTGCTACCGCAACCCTCGGTCC
627 GACGAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
** ** * *
18720476 GGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCATATGCCTAA
692 GGTCCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGCAAGCCAAA
* * *
18720541 GTCAACCCACGAAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCGGGG
757 GTCAACCCACGAAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGG
* * * *
18720606 ATCGACCGGGTCCCCCTCTGCATGCTGCCAATCCTACTACCATAACCCTC-AGTCCGA-TCTGAT
822 ATCGA-CGGGTCCCCCTCTGCGTGCTACCAATCCTGCTATCATAACCCTCGA-T-CGATTCTGAT
* * * *
18720669 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACG--A-AA----CGAGCGGGCGGGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGGGGCGGGCGGGCGGGC
* * * * * *
18720727 GGGCACTATGTCAGCCAGAGAGACAGGATGCGTAAGTCGTGGATCGATAGGGTGGTAGGTGGGTT
66 GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTT
* * *
18720792 TAGGTACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAGTTCATACAATGGT
131 TAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * *
18720857 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTATTTTCTATTTTTCAGGATTTTTGA
196 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATATTTCATGATTTTTGA
* * ** * *
18720922 AACTTTTTACGGTTTGTAATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAG
261 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * ** * * *
18720987 ACGTGATCCTTGTATTTTTCTTGGCAT-GCCTAAAAAAATTCAAATAAAAATTCGAATTGTATAA
326 ACGTGATCCTTGTATTTTTTTTGGCATGGAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
18721051 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-AAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
18721115 ATGTAAAATCTCAAATGCTCTTTAA-AGGGTGTGAGTTCTTGA-GTTTGATGAGGGATAGGGGGC
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
*
18721178 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCTGGCCCCCCC
520 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-C--G----ACC
*
18721243 GACTGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGTGATGCTTCGATGGTAGTGCCCCGAC
578 GACT--CGGAACCCCAATGCCGCCGGTCAGGTTCTC---CG--G--T-GAT-G--GTGCCCCGAC
* * ** * * **
18721308 GAAGAAAAATGCGGCACCAGCATATGCTTGATCCCAGCATGTGCTGCCGTAACCCTCGGTATGGT
630 GAAAAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* * *
18721373 CCAATCTTAGACTGGGAATGAACTCCGTATGCCTA-A----G--TCAA--CC-C---CC---G--
695 CCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGCAAGCCAAAGTC
* * * * * *
18721420 AA---ACG--A-GCGTGTAC--GTGCTCAGCCGGCCATAGGGGTGGGATGCGCAAGCCGGGGATT
760 AACCCACGAAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGA-T
* ** * * * * * * *
18721477 GGTTGGGTCCCCCTCTGCGTGCTGTCGAATCTATTGCT-GC--AGCCCTCGATCCAGTCTGAT
824 CGACGGGTCCCCCTCTGCGTGCT-ACCAATC--CTGCTATCATAACCCTCGATCGATTCTGAT
* * * * * *
18721537 CTTACACTGGGAATGAACTCCGTATGACTAAGCCAACTGATGAAAC---GAGCGTGC-GG-GTGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGGGGCGGGCGGGCGGGC
* * * *
18721597 --TCACCACGTCGGCCTGAGAGACGGGATGCGCAAGCCATGGATCGATAGTGTGGTAGGTGGGTT
66 GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTT
* * * *
18721660 TAGGCACATGTTCATATTTCTATGAGCCAATGCTATTTTTATGGCTTGTAAATTCATAAAATGGT
131 TAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * *
18721725 CCCTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACGACTCATTTTCTA-ATTTTCACGATTTTTA
196 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATA-TTTCATGATTTTTG
*
18721789 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGTTA
260 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
18721854 AATGTGATCCTTGTATTTTTTTTGGCATGGACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAA
325 GACGTGATCCTTGTATTTTTTTTGGCATGGACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
18721919 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATGTT-AGACACTTT-ATGGCTACTGGCGGCAAA
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCAT-TTCAGACACTTTAATGGCTACTGGCAGCAAA
18721982 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
18722047 CCAATATAAGGGCCAAGCACCAGCACCCATCACACATCATGTGCGCACACCCCCCGATCG-CT-G
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCGACTCG
* * * **
18722110 GAACCCTAATGCCGCCGGTCAGGTTCTTCGGTGATGGTTCCCCGGGGAAAAAAAATGCGGCACCA
584 GAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGACGAAAAAAAATGCGGCACCA
* * *
18722175 GTACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAAACTGGGAAT
649 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAAT
* * *
18722240 GAACTCCATATGCTTAGACTGGGAATGAACTCCGCAAGCCAAAGTCAACCCACGAAATGACCCTG
714 GAACTCCATATGCTTAGACTGGGAATGAACTCCGCAAGCCAAAGTCAACCCACGAAATGAGCGTA
* * * * *
18722305 CGGGCACTCTGCCGGCCAGAGGGGCGGGATGCGTAAGTCGAGGATCGACGAGTCCCCCTCTGCGT
779 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACGGGTCCCCCTCTGCGT
*
18722370 GCTACCGATCCTGCTATCATAACCCTCGATCTGATTC-GAT
844 GCTACCAATCCTGCTATCATAACCCTCGATC-GATTCTGAT
*
18722410 CTTAGA-TGGGGAATGAACTCCGTATGCCTAAGCCGAAC-GATGAAACAAGTGGGCGGGCGGGCG
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGCC-AACTGACGAAACAAG-GGGCGGGCGGGCG
* * * * *
18722473 GGCGGGCACTACGCCGACCAGAGAGATGGGATGCGCAAGCC-T-CATCGATAGGGTAGTAGGTGG
63 GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGG
18722536 GTTTAGGCACATCTTCATATTTCT-TCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
128 GTTTAGGCACATCTTCATATTTCTAT-GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * * *
18722600 TGGTCCTTTAAGCCTTCATGTGAAGTTTCTTGGCAAGACGACTCGTTTTCTATATTTCATGATTT
192 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATATTTCATGATTT
*
18722665 TTGAAA-TGTTTTTCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
257 TTGAAACT-TTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
**
18722729 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGCG-TGAAAAAATTCAGCTAAAAACTCGAAGTG
321 GGTAGACGTGATCCTTGTATTTTTTTTGGCATG-GACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * *
18722793 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATAGCTTCTGGCAG
385 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
18722858 CAAACCTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAG
450 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* *
18722923 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGCGCACAACCCCCGACCCC
515 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGA----
* * ** ** *
18722988 CCGGTCGTCGAAACCCCAATGTTGCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAA
576 CC-GAC-TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGACGAAAAAAAA
* * ** * *
18723053 TGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTTAGTCCAGTCCGATCTTA
639 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTA
* * * * *
18723118 GACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAAATCTG-TATCTCTAAGTCAACCCACG
704 GACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGCAAGC-CAAAGTCAACCCACG
* * * * * *
18723182 AAACGAGCGTACGGGCGCT-AACCGGCCAGAGGGGCGGGACGCGTAAGCCGAGGATCGGCCGGTT
768 AAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC-GACGGGT
** * *
18723246 CCCCCTCTGCGTGCTACCAATCCTGCTATCGCAACCCTCGGTCAAGTT-TGAT
832 CCCCCTCTGCGTGCTACCAATCCTGCTATCATAACCCTCGATCGA-TTCTGAT
* * * *
18723298 CTTATACTGGGAATGAACTCCGTATTCCTAAGCCAACTGACGAAACGAGCGTGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAG-GGGCGGGCGGGCGGG
* * *
18723363 CGGGCATTACGTCGGCCAGAGAGACGGGATGGGCAAGCCGTGGATCGATA
65 CGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATA
18723413 TGCCTAAGTC
Statistics
Matches: 2359, Mismatches: 289, Indels: 208
0.83 0.10 0.07
Matches are distributed among these distances:
848 96 0.04
849 1 0.00
850 1 0.00
851 3 0.00
852 1 0.00
853 1 0.00
854 1 0.00
855 3 0.00
856 1 0.00
857 2 0.00
858 1 0.00
859 27 0.01
861 2 0.00
862 2 0.00
863 2 0.00
864 1 0.00
866 2 0.00
867 16 0.01
868 452 0.19
869 31 0.01
870 87 0.04
871 8 0.00
872 12 0.01
873 74 0.03
874 39 0.02
876 2 0.00
877 6 0.00
878 7 0.00
879 300 0.13
880 134 0.06
881 32 0.01
882 4 0.00
883 1 0.00
884 4 0.00
885 5 0.00
886 1 0.00
887 44 0.02
888 308 0.13
889 5 0.00
890 11 0.00
891 6 0.00
892 70 0.03
893 50 0.02
894 300 0.13
895 164 0.07
901 1 0.00
906 38 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (883 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGGGGCGGGCGGGCGGGC
GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATATTTCATGATTTTTGA
AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTTTTGGCATGGACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCGACTCGGA
ACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGACGAAAAAAAATGCGGCACCAGC
ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGA
ACTCCATATGCTTAGACTGGGAATGAACTCCGCAAGCCAAAGTCAACCCACGAAATGAGCGTACG
GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACGGGTCCCCCTCTGCGTGC
TACCAATCCTGCTATCATAACCCTCGATCGATTCTGAT
Found at i:18723508 original size:26 final size:26
Alignment explanation
Indices: 18723471--18723521 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
18723461 AGTCCAATCT
* *
18723471 TAGACTGGGAATGAGCTCCGTATGCG
1 TAGACTGAGAATGAACTCCGTATGCG
18723497 TAGACTGAGAATGAACTCCGTATGC
1 TAGACTGAGAATGAACTCCGTATGC
18723522 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.20, G:0.29, T:0.24
Consensus pattern (26 bp):
TAGACTGAGAATGAACTCCGTATGCG
Found at i:18724398 original size:26 final size:26
Alignment explanation
Indices: 18724361--18724413 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18724351 CTGATTCGAT
18724361 CTTAGACGGGGAATGAACTCCGTATG
1 CTTAGACGGGGAATGAACTCCGTATG
* *
18724387 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACGGGGAATGAACTCCGTATG
18724413 C
1 C
18724414 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACGGGGAATGAACTCCGTATG
Found at i:18725279 original size:26 final size:26
Alignment explanation
Indices: 18725250--18725302 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18725240 CTGGTCCGAT
18725250 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18725276 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18725302 C
1 C
18725303 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18725803 original size:903 final size:889
Alignment explanation
Indices: 18723449--18726031 Score: 3655
Period size: 890 Copynumber: 2.9 Consensus size: 889
18723439 GTGCGGGTGT
** * * * *
18723449 AACCCTCGGTCCAGTCCAATCTTAGACTGGGAATGAGCTCCGTATGCGTAGACTGAGAATGAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* *
18723514 CCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGACG
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATG
* ** * ** ** * *
18723579 CGTAA-ATCAAGGATCGGTCGATTCCCCCTCTACGTGCT-ACTGATCCTGCTATCGTAGCCCTCA
131 CG-AAGCT-GGGGATCGGCCGGGTCCCCCTCTACGTGCTGAC-GATCCTGCTGCCGCAACCCTCA
* * * * *
18723642 GTCCAGTCTGATCTTAGACTGGGAATGAACTTCGTACGCCTAAGCCAATCGACGAAATGAGC---
193 GTCCA-TCCGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGT
* *
18723704 GGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATTGGGTGGTAGGTG
256 GGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
18723769 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATAGAA
321 GGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * *
18723834 TGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGATGACTCGTTTTATATTTTTCACAATTT
386 TGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
** * * * *
18723899 TCAAAACTTTTTACGATTCAGGATTTTTTACAATTTTTCTGGAAGGAGTTTTGGCCCGAAACTTG
451 TTGAAACTTTTT-CGGTTCGGGATTTTTTA-AATTTTTTTGGAAGGAGTTTTGGCCCAAAACTTG
* *
18723964 GTAGACATGATCCTTGTATTTTAGTTT-GCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGT
514 GTAGACATGATCCTTGTATTTT-TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* * * * *
18724028 ACAATATTTTGTGACCATTCGAAAAAATTATCCCTATTTTAGACACTTTAATGGCTACTGGCAGC
578 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGC
*
18724093 AAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
643 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
*
18724158 GGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCTCGGCCCC
708 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCC
* * * * * *
18724223 CCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATCCTCCGGCGATGGGGCCCC
772 CCAGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATCCTCCGACGATGGGGCCCC
* * * *
18724288 GGCAAAGAAAAATGTGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCAC
837 GACAAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAACATGTGCTGCCAC
* * *
18724341 AACCCTCGGTCTGATTCGATCTTAGACGGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * *
18724406 CTGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGCTCAGTCGGCTA-AGGGGTGGGAT-
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATG
* * * * *
18724469 -GAAGCCGGGTATCGGCTC-GGTCCCCCTTTACGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT
131 CGAAGCTGGGGATCGGC-CGGGTCCCCCTCTACGTGCTGACGATCCTGCTGCCGCAACCCTCAGT
* * *
18724532 CCGATCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCGACCGACGAAACGAGCGGTGT
195 CC-ATCCGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGTGG
*
18724597 GCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGTGTGGTAGGTGGG
258 GCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
18724662 TTTA-GCACATGTTCATATTTCTTCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
323 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
18724726 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
388 GTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * *
18724791 GAAACATTTTTCGGTTCGGGATTTTCTAAAATTTTTTCGAAAGGAGTTTTGGCCCAAAACTTGGT
453 GAAAC-TTTTTCGGTTCGGGATTTT-TTAAATTTTTTTGGAAGGAGTTTTGGCCCAAAACTTGGT
* * * *
18724856 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTTGAAGTGTACA
516 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
18724921 AGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAA
581 AGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
18724986 CCCT-TAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
646 -CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
18725050 GCCAGTATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCA
710 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCA
* * * * * * *
18725115 TATCATCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACAATGCTCCGACGATGGTGCCTCGAT
775 GATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATCCTCCGACGATGGGGCCCCGAC
* *
18725180 GAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAACATGTGCTGCCGC
840 AAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAACATGTGCTGCCAC
18725230 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
1 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
** * *
18725295 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTATGGGCACTCAGCCGGCCAGAGGGGCGGGATG
66 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATG
* ** * * *
18725360 CGCAAGCTGGGGATCGACCGGGTCCCCCTCTGTGTGCTGTCGATCCTGCTGCCACAACCCCCAGT
131 CG-AAGCTGGGGATCGGCCGGGTCCCCCTCTACGTGCTGACGATCCTGCTGCCGCAACCCTCAGT
** *
18725425 CCTATCCGATCTTAGACTGGCAATGAACTCCGTATGAATAAGCCAACCGGCGAAACGAGCGAGCG
195 CC-ATCCGATCTTAGACTGG-AATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-CGA---
* * * *
18725490 GGCGGGTGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCTGTGGATCAATAGGGTG
251 -GC-GGTGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* *
18725555 GTAGGTGAGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAGTT
314 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT
*
18725620 CATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
379 CATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
18725685 ATGATTTTTGAAACTTTTTGTGGTTCGGGATTTTTTAAATTTTTTTTGGAAGGAGTTTTGGCCCC
444 ACGATTTTTGAAACTTTTT-CGGTTCGGGATTTTTTAAA-TTTTTTTGGAAGGAGTTTTGGCCCA
*
18725750 AAACTTGGTAGACATGATACTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
507 AAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* *
18725815 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAAACACTTTAATGGCTACT
572 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACT
* * *
18725880 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGG
637 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
18725945 GATA-GGGGCCAATATAAGGACCAAGTACCAACACCCATCGCACATCATGTGCGCACACCCCCCG
702 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* *
18726009 GCTCCCC-GATCACCGGAACCCCA
767 GCCCCCCAGATCACCGAAACCCCA
18726032 CTGCGTGTTG
Statistics
Matches: 1502, Mismatches: 159, Indels: 51
0.88 0.09 0.03
Matches are distributed among these distances:
888 92 0.06
889 219 0.15
890 399 0.27
891 87 0.06
892 107 0.07
893 93 0.06
894 2 0.00
896 1 0.00
897 3 0.00
901 15 0.01
902 141 0.09
903 343 0.23
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (889 bp):
AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATG
CGAAGCTGGGGATCGGCCGGGTCCCCCTCTACGTGCTGACGATCCTGCTGCCGCAACCCTCAGTC
CATCCGATCTTAGACTGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGTGGGCG
GGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
ACTTTTTCGGTTCGGGATTTTTTAAATTTTTTTGGAAGGAGTTTTGGCCCAAAACTTGGTAGACA
TGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCAGATCAC
CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATCCTCCGACGATGGGGCCCCGACAAAGAA
AAATGCGACACCAGCACATGCCCGAGCCCAACATGTGCTGCCAC
Found at i:18726517 original size:19 final size:18
Alignment explanation
Indices: 18726493--18726535 Score: 50
Period size: 18 Copynumber: 2.3 Consensus size: 18
18726483 CTCGTTTTCT
*
18726493 ATTTTTCACGATTTTGGAA
1 ATTTTTCACG-GTTTGGAA
*
18726512 ATTTTTTACGGTTTGGAA
1 ATTTTTCACGGTTTGGAA
*
18726530 GTTTTT
1 ATTTTT
18726536 TAAATTTTTT
Statistics
Matches: 21, Mismatches: 3, Indels: 1
0.84 0.12 0.04
Matches are distributed among these distances:
18 12 0.57
19 9 0.43
ACGTcount: A:0.21, C:0.07, G:0.19, T:0.53
Consensus pattern (18 bp):
ATTTTTCACGGTTTGGAA
Found at i:18730597 original size:26 final size:26
Alignment explanation
Indices: 18730561--18730613 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18730551 CCGGTCTGAT
18730561 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
18730587 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
18730613 C
1 C
18730614 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18730954 original size:26 final size:26
Alignment explanation
Indices: 18730925--18730977 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18730915 CCGATCTGAT
* *
18730925 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
18730951 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
18730977 C
1 C
18730978 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:18736852 original size:26 final size:26
Alignment explanation
Indices: 18736816--18736868 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
18736806 CTGGTCTGAC
18736816 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18736842 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18736868 C
1 C
18736869 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18738646 original size:26 final size:26
Alignment explanation
Indices: 18738617--18738669 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18738607 CAGGTCTAAT
*
18738617 CTTAGATTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCTATATG
*
18738643 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTATATG
18738669 C
1 C
18738670 CCATGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTATATG
Found at i:18739553 original size:26 final size:26
Alignment explanation
Indices: 18739523--18739575 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18739513 CCAGTCTGAT
* *
18739523 CTTAGACTGCGAATGATCTCCGTATG
1 CTTAGACTACGAATGAACTCCGTATG
18739549 CTTAGACTACGAATGAACTCCGTATG
1 CTTAGACTACGAATGAACTCCGTATG
18739575 C
1 C
18739576 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCGTATG
Found at i:18743990 original size:25 final size:26
Alignment explanation
Indices: 18743947--18743998 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
18743937 TCGGTCCGAT
18743947 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
*
18743973 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
18743998 C
1 C
18743999 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:18744862 original size:26 final size:26
Alignment explanation
Indices: 18744833--18744885 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18744823 CCAGTCTGAT
18744833 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
*
18744859 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
18744885 C
1 C
18744886 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:18745607 original size:892 final size:885
Alignment explanation
Indices: 18731026--18747660 Score: 17879
Period size: 876 Copynumber: 18.7 Consensus size: 885
18731016 TAGGTTCAAA
* * ** *
18731026 ATTTTTTTAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTAATAGACATGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
18731091 TGTTGGCATGCACCAAAAAATTCAAG-TAAAAACTTGAAGTGTACAAGATTTTGTGATCATTTGA
66 TTTTGGCATGAACAAAAAAATTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
18731155 AAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGTAGAAAACCTATAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * * * **
18731220 TCTTTAAGGGGATGTGAGGTCTTGAGGTTTGATCAGGGATAAGGGGCCAACAGAAATGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-AGGGGCCAATATAAGGGCCAAGTA
* * ** * *
18731285 CCAGCACCCATCGCACATCATGTACGCACAACCCCCCCAACCCCCCCCGATCACCGAAACCCTAA
259 CCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCCGA--CCCCCCGATCGTCGGAACCCCAA
* * *
18731350 TGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACAATGGTGCCCCGACAAAGAAAAATGCGGCA-
321 TGCCGTCGGTCAGGTTCTCC---GA---T--G---ATGGTGCCCCGACGAAGAAAAATACGGCAC
* * * *
18731414 TAGCATATGCCCGAGCCCAGCATGTGCTGCTGCAA-CCTCAG-TCCGGTCTGATCTTAGACTGGG
375 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GCTCCGGTCCGATCTTAGACTGGG
* * * *
18731477 AATGAACTCCCTATGCTTAGACTGGGAATTAACTCTGTATGCCTAAGTCAACCCATGAAACAAGC
439 AATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * ** *
18731542 GTACGGGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCACT
504 GTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCT
* * ** * * * * *
18731607 GTGTACTACCGATCCTACTGCCGCAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
569 GCGTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCC
* * * * * *
18731672 GTATGCCTAGGCCAACCGACGAAACG-AGCGGGCAGGCAGGCAGGCGGGTACTACGCCGGCCAGA
634 ATATGCCTAAGCCAACCGACGAAA-GAAGCGAG--GGC-GG-A--CGGGCACTACGTCGACCAGA
* * *
18731736 GAGACGGGATGCGCAAGTCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTT
692 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
** * *
18731801 CTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTGA
757 CTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * *
18731866 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTGACGATTTTTAAAACTTTTTACGGTTCAAG
822 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* *
18731930 ATTTTTTAAAATTGTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGT-GTT
1 ATTTTTTAAAATT-TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * * * * *
18731993 TTTTTGGCAT--TCATAAAAAAGTCACCTACAAACTGGAAGTGTACAATATTTTGTGATCATTTG
65 TTTTTGGCATGAACA-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
18732056 AAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
18732121 CTCTTTAAGGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAG
194 CTCTTTAA-GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAG
* * * *
18732186 TACCAACACCCATCGCACATCATGTGCGCACACCCCCCCGATCCCCCGATCGCCGGAACCCCAAC
257 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAAT
* * *
18732251 GCCGCCGGTCAGGTTTTTCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCCCC
322 GCCGTCGGTCAGG-TTCTC--CGA---T-----GATGGTGCCCCGACGAAGAAAAATACGGCACC
*
18732316 AGCACATGCCCGAGCCCAGCATGTGCTGTCGCAA--C-C-CT-CGGTCCGATC-----C------
376 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAA
* * *
18732365 -G-A-T--C--T-C--AGACTAGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAACGAGCAT
441 TGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
** * * * ***
18732420 GCGGGCGCTCAGTCGACCAGAGGGGCGGGATGTGTAAGCCGGGGATCGGTTGGGTCCCCCTCTGC
506 GCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGC
* * * ** *
18732485 GTGCT-ACAGAT-ATTGCTACCGCAACCCTCGGTCCGGTCTAATCTTGGACTGGGAATGAACTCC
571 GTGCTGTC-GATCA-TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCC
* * * * * *
18732548 GTATGCCTAAGCCAACTGACGAAATG-AGCGTCCGGGCTGACGAGCGGGCACTATGTCGGCCAAA
634 ATATGCCTAAGCCAACCGACGAAA-GAAGCG--AGGGC-G--GA-CGGGCACTACGTCGACCAGA
* *
18732612 GAGACGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTT
692 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
*
18732677 CTGCATGCCAA-AGCCATTTTTATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
757 CTGCATGCCAATA-CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * * *
18732741 AAGTTTCATGGCAAGACAACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTGCAGTTC-GA
821 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAG-
18732805 G
885 G
18732806 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACATT-GTAGACGTGATCCTTGTATTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTT
* *** * *
18732869 TTGTTGGCATGCGTAAAAAAATTCAGCTAAAAACTCGAAGTATACAAGATTTTGCGACCATTTGA
65 TTTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * * * *
18732934 AAAAGGTGTCCCTATTTCAGACACTTTAAAGGCTATTAGCAGCAAACCGGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
18732999 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA
* * * *
18733064 CCAACACCCATCGCACATCATGTGCGCACACCCCCCCGATCCCCCGATCGCCGGAACCCCAACGC
259 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATGC
* * *
18733129 CGCCGGTCAGGTTTTTCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCCCCAG
324 CGTCGGTCAGG-TTCTC--CGA---T-----GATGGTGCCCCGACGAAGAAAAATACGGCACCAG
*
18733194 CACATGCCCGAGCCCAGCATGTGCTGTCGCAA--C-C-CT-CGGTCCGATC-----C-------G
378 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATG
* * *
18733242 -A-T--C--T-C--AGACTAGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAACGAGCATGC
443 AACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
** * * ***
18733298 GGGCGCTCAGTCGACCAGAGGGGCGGGATGCGTAAGCCGGGGATCGGTTGGGTCCCCCCTCTGCG
508 GGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGT-CCCCCTCTGCG
* * * ** * *
18733363 TGCT-ACAGAT-ATTGCTACCGCAACCCTCGGTCCGGTCTAATCTTGGACTGGGAATGAACTCCG
572 TGCTGTC-GATCA-TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCA
* * * * * * *
18733426 TATGCCTAAGCTAACTGACGAAATG-AGCGTCCGGGCTGACGGCGGGCACTATGTCGGCCAAAGA
635 TATGCCTAAGCCAACCGACGAAA-GAAGCG--AGGGC-G--GACGGGCACTACGTCGACCAGAGA
* * *
18733490 GACGGGATGCGCAAGCCTTGCATCGATAGGGTGGTAGGTGGGTTTCGGCACATCTTCATATTTCT
694 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*
18733555 GCATGCCAA-AGCCATTTTTATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
759 GCATGCCAATA-CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* * * * * *
18733619 GTTTCATGGCAAGACAACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTGCAGTTC-GAG
823 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAG-G
18733682 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCAAACATT-GTAGACGTGATCCTTGTATTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTT
* *** * *
18733745 TTGTTGGCATGCGTAAAAAAATTCAGCTAAAAACTCGAAGTATACAAGATTTTGCGACCATTTGA
65 TTTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * * * *
18733810 AAAAGGTGTCCCTATTTCAGACACTTTAAAGGCTATTAGCAGCAAACCGGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
18733875 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC-A-ATAAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA
* * * *
18733938 CCACCACCCATCGCACATCATGTGTGCACACCCCCCAGCCCCCCCGATCGTCGGAACCCCAATGC
259 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATGC
* * * * *
18734003 CG-CTGGTCAGGTTCTCCGGCGTTGCTCTGGCGATGGTGCCTCGACGAAG-GAAATGCGACACCA
324 CGTC-GGTCAGGTTCT-C--C---G--AT---GATGGTGCCCCGACGAAGAAAAATACGGCACCA
* * *
18734066 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCAGTCCGATCTTAGACTGGGAAT
377 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAAT
* * *
18734131 GAACTCCATATGCTTAGACTGGGAATGAACTCCGCATTCCTAAGTCAACCCACGAAACGAGCGTG
442 GAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** * * * * * *
18734196 CGGGCGCTCAGCCGGCCTTAAGGGTGGGATGCGTAAGCCGGGGATCGACCAGGTCCCCCTCTACA
507 CGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCG
* * * * ** ** * *
18734261 TGCTGCCAAACCTGCTGTTGCAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCGTA
572 TGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATA
* * * * * * *
18734326 TGCCTAAGGCAACTGACGAAATGAGCATCTG-GGCTGACGGGCGGGCACTATGTCGGCCAAAGAG
637 TGCCTAAGCCAACCGACGAAA-GA--AGC-GAGG--G-CGGACGGGCACTACGTCGACCAGAGAG
*
18734390 ACGGGATGCTCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
695 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* * *
18734455 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGACCCCTCAAGCCTTCACGTGAAG
760 CATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGG-TCCCTTAAGCCTTCACGTGAAG
* * *
18734520 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC-TTTTAGCGTTTCGGG
824 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTA-CGGTTCAGG
* * *
18734582 ATTTTTTAAAATTTTTTTGGAAAGAGTTTTGGCCCCAAACTTGGTAGGCGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
18734647 TTTTGGTATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
18734712 AAAAGTGACCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCGCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
18734777 CTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTAC
*
18734842 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-CCCCCCGATCG-CTAGAA-CCCAATG-
260 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTC-GGAACCCCAATGC
* * * ** *
18734902 CG-CGGTCAGGTTCTCCAGCGATCTCCACGAAGGGTGCCCCTTAC-AAGACAAATGTGGTTACCA
324 CGTCGGTCAGGTTCT-C--CGA--T----G-ATGGTGCCCC-GACGAAGAAAAATACGG-CACCA
* * * * * * * ***
18734965 GC-CACTGCCTGAGCCCAGCTTGTGCTACCACAACCCTCGGTCCAGTCTGATCTTATTTTGGGAA
377 GCACA-TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAA
* * * * *
18735029 TGAACTCCATATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCGACCCACAAAATGAGCGT
441 TGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * ** * ** * *
18735094 ACGGGCGCTCAGCCGGCCGGACGGGCAAGATGCGCAAGTCGGGGATCGGTCGGGTCCCTCTCTGT
506 GCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGC
* * * * ** * *
18735159 GTGCTGCCGATCCTGCTGTCGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCC-G
571 GTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCAT
* * * * *
18735223 ATGCTTAAGCCAACCGACAAAACG-AGCGGGCGGGCAGGCAGGCGAGCACTACGTCGGCCAGAGA
636 ATGCCTAAGCCAACCGACGAAA-GAAGC--GAGGGC-GG-A--CGGGCACTACGTCGACCAGAGA
* *
18735287 GACGGGATGCGCAAGCCGTGGATCAAAAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
694 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*** * *
18735352 ATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACGTGAAG
759 GCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * **
18735417 TTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTCACGGTTTGGG
824 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * * * *
18735479 ATTTTTTAAAATTATTTCGAAAGGATTTTTGGCCCTAAACTTGGTAGACATGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
18735544 TTTTGGTATGCAA-AAAAAAATTCAGCTAAAAACTCGAAGTGTTCAAGATTTTGTGACCATTTGA
66 TTTTGGCATG-AACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
18735608 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTAAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * *
18735673 TCTTTAAGGGGGTTTGAGTTCTCAAGGATTGATGAGGGATAGGGGGCCACTATAAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA
* ** *
18735738 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-CCCCCCCATTCACCAGAACCCCAATG
259 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGA-TCGTCGGAACCCCAATG
* * * **
18735801 CCGCCAGTCAGGTTCTCCGACGATGCTTCGACGATGGTGTCCCGACGAAGAAAAATGTGGCACCA
323 CCGTCGGTCAGGTTCT-C--CGA----T----GATGGTGCCCCGACGAAGAAAAATACGGCACCA
* * * * *
18735866 GCACATGCCCGAGCCCAGCACGTGCTGTCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAAT
377 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAAT
* * * * * **
18735931 GAACTCCGTATGCTTAGACTGGGAATGAACTCCATATACCTAAGTCAACCCATGAAACAAATGTG
442 GAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * ** *
18735996 CGGGCGCTCAGCCAGCCGGAGGGGCGGGATGCGTAAGCCGGCGATC-AGTCGGGTCCCCCAATGT
507 CGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGC
* * ** * * * *** * * *
18736060 GTGCTGTTGATCCTGCTGTTGCAACCGTTGATCCAATCTGATCTTAGACTGGAAATGAACTCCGT
571 GTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCAT
* *
18736125 ATGCCTAAGCCAACCGATGAAACGAGCAGGCGGGCAGGCGGGCGTG-CGGGCAGGCACTACGCCG
636 ATGCCTAAGCCAACCGACGAAA-GA--A-GC--G-A---GGGCG-GAC--G--GGCACTACGTC-
**
18736189 GA-CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTGCATCTT
685 GACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
** * * *
18736253 CATATTTCTGTGTGCCAATTCCATTTTTATGGCTTGTAAATTCATATAGTGGTCCCTTAAGCCTT
750 CATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
18736318 CACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGG
815 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
18736383 TTC-GTG
880 TTCAG-G
* * * * *
18736389 ATTTTTTAAAATTTTTTCGGTAGAAGTTTTAGCCCCAAACTTGCTAGACATGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
18736454 TGTTGGCAAGCAC-AAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
18736518 AAAAGTGTCCTCATTTTAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
18736583 CTTTAAGGGGGTGTGAGTTCTCAAAGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTAC
* * ** * * *
18736648 CAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCTAATCGTCGAAACCCCAACGTC
260 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATGCC
* * * *
18736713 GCCGGTCAGGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAG
325 GTCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* * * * * * * *
18736778 CCCAACATGTGCTACCACAACCGTCAG-TCTGGTCTGACCTTAGACTGGGAATGAACTCCGTATG
390 CCCAGCATGTGCTGCCGCAACCCTC-GCTCCGGTCCGATCTTAGACTGGGAATGAACTCCCTATG
* * * *
18736842 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACAAGCGTGCGAGCGCTCAGC
454 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * ** * ** *
18736907 CGACCAGAGGGGCGAGATGCGCAAGTC-GGGATCGGTCGGGTCCCCCTTTGCGTGCTACCGATCT
519 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCA
* * * * * * *
18736971 TGCTACTGCAACCCTTGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
584 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* * * * * *
18737036 TCGACGAAACG-AGCGGGCGGGCGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
649 CCGACGAAA-GAAGC--GAGGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCC
* * *
18737100 GTGGATCGATAGGGTGGTACGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
711 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTT
* * *
18737165 TTATGGCTTGTATATTCATACAATGGTCCCTTAAGCCTTCACGTGAATTTTCACGGCAAGACGAC
776 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
18737230 TGGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGG
841 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * * *
18737275 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCGAAACTTGGTAGACGTGATCCTGGAATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
** * * * ** * *
18737340 AGTTGACATGCACAAAAAAATTCAGCAAAAAAAACGAAGTGTACGAGATTTTGTGACTATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
18737405 AAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
18737470 CTTCAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTAC
* * * * *
18737535 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCTCCGGCACCCACGATCGCCGTAACCCTAA
260 CAGCACCCATCGCACATCATGTGCGCACA--CCCCC-CCGAC-CCCCCGATCGTCGGAACCCCAA
* * * * * *
18737600 TCCACCGGTCAGGTTCTCCAGCGATGCTCCGATGATGGTGTCCTGGCGAAGAAAAATGCGGCACC
321 T--GCC-GTC-GG---T-CAG-G-TTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACC
* * ** * **
18737665 AGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGATCATGTTCGATCTTAGACTACGAA
376 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAA
* * *
18737730 TGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCATCCCACGAAACGAGCGT
441 TGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * * * *
18737795 GCGGGCACTC-AGCGAGCCAGAGGGGCAGGATGCGCAAGCCGAGAATTGGCCAGGTCCCCCTCTG
506 GCGGGCGCTCAACCG-GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTG
* * * ** * *
18737859 CGTGCTGCCAATCCTGCTATCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCG
570 CGTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCA
* * * * * *
18737924 TATGCATAAGCCAACCAAGGAAACGAACGGGTGGGC-GAGCGGGTGGGCACTACGTCGGCCAGAG
635 TATGCCTAAGCCAACCGACGAAA-GAA-GCGAGGGCGGA-C----GGGCACTACGTCGACCAGAG
* * * * * * *
18737988 ATACGAGG-TGAGCAACCCGTGGATCAATAGGGTGGTAGCTAGGTTTAGGAACATCTTCATATTT
693 AGACG-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* *
18738052 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGA
757 CTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
* * * ** * **
18738117 AGTTTCATCGCAAGACGACTCTTTTTCTATTTTTTATGATTTTCGAAAGTTTTTGTGGTTC-GAG
822 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAG-G
* * *
18738181 ATTTTTTAAAATTTTTTCGAAAGGAATTTTGGCCCCAAACTTGGTAGACGTGACCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * * *
18738246 TCTTGGCATGCACAAAAACATTCAACTAAAAACTCGAAGTGCACAAGATTTTGTGGCCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
18738311 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAATCGGTAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
18738376 CTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATATGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTAC
* * * * *
18738441 CAGCACCCATCGCAGATCATGTGTG--CA-CCCCCCGGCCCCCCGATCGCCAGAACCCCAATGCC
260 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATG--
* * * * *
18738503 ACCGATCAGGTTCTCTGACGATGCTCCGGTGATGGTGCCCCGATGAAGAAAAATATGGCACCAGC
323 -CCG-TC-GG---TC--A-GGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
* * * * ** *
18738568 ACATGCCCGAGCCCAGCATCTGCTGTCGCAACCCTCGGTCAGGTCTAATCTTAGATTGGGAATGA
379 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGA
** * * * *
18738633 ACTCTATATGCTTAGACTGGGAATGAACTCTGTATGCCCATGTCAACCCACGAAAGGAGCGTGCG
444 ACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * ** * * * * *
18738698 GGCGCTCAGCTGACCAGATGGGCAAGAGGCGCAAGCCGAGGATCGATCAGGTCCTCCCT-AG-GT
509 GGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCC-CCCTCTGCGT
** * * *** * * **
18738761 GCTACCGATCCTACTATTAG-AACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAATTCTGTA
573 GCTGTCGATCATGCT-GCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATA
* * * * * *
18738825 TGCCTAAGCCAACCGACGAAACGAGTGGGCGGGCGGGCGGGA-GGGCACTATGCCGGCCATAGAG
637 TGCCTAAGCCAACCGACGAAA-GA---AGC--GAGGGC-GGACGGGCACTACGTCGACCAGAGAG
* *
18738889 ACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTTCT
695 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCT
* * *
18738954 GCACGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAG
759 GCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * *
18739019 TTTCATTGCAAGACGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
824 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * * *
18739081 ATTTTTTAAAATCTTTTT-GGAAGGCGTTTTGGCCCCAAACTTGCTAGACGTGACCCTTGTATTC
1 ATTTTTTAAAAT-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* ** * * * *
18739145 TTGTTGGCGCGCATAAAAAAA-TCAGCCAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
65 TTTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
18739209 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
18739274 TCTTTAAGGGGGTGTGCGTTCTCGAGGTTTGATGAAGGATAGGGGGCCTATATAAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA
* * ** *
18739339 CGAGCACCCATTGCACATCATGGTGCGCACACCCCTTTCG-CCCTCACGATCGTTCGGAA-CCC-
259 CCAGCACCCATCGCACATCAT-GTGCGCACACCCC-CCCGACCC-CCCGATCG-TCGGAACCCCA
* * *
18739401 ATGCCGGCGGTCAGCGTTCTTCTGCGATGCTTCCGACGATGAATGCCCCGGCGAAGAAAAATACG
320 ATGCCGTCGGTCAG-GTTC-TC--CGA----T-----GATG-GTGCCCCGACGAAGAAAAATACG
* *** * * * *
18739466 GCACCAGCACATGCCTGAGCCCAGCATGTGCTATTGCAACCCTTGATCCAGTCTGATCTTAGACT
371 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACT
* * * ** * *
18739531 GCGAATGATCTCCGTATGCTTAGACTACGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACA
436 GGGAATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * *
18739596 AGCGTGCGGGCGCTCAACCAGCCAGAGGGGCGGGATGAGCAAGCTGGGGATTGATCGGGTCCCAC
501 AGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC
** * * *** * * * * *
18739661 TCTATGTGCTGTTGATCCTGCTATTGCAACCCTTGGTCCGTTCTGATCTTAGACTAGGAATGAAC
566 TCTGCGTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAAC
* ** **
18739726 TCCACATGCCTAAGCCAACCGACGAAACG-AGC--GGGCAGG-CGGGCACTACACCGGGCAGAGA
631 TCCATATGCCTAAGCCAACCGACGAAA-GAAGCGAGGGC-GGACGGGCACTACGTCGACCAGAGA
* * * *
18739787 GACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGTCACATCTTCACATTTCG
694 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
18739852 GCATGGCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
759 GCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * * *
18739917 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTGCGGTTCGGG
824 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * * * * * * *
18739979 ATTTTTTTAAATTTTTTTGAAAGGAGTTTT-ACCACCAAGCTTTGTAGACGTGATCCCTCTATTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC-CCAAACTTGGTAGACGTGATCCTTGTA-TT
* * *
18740043 TTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTG
64 TTTTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
18740108 AAAAAAATGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCAT-AAAT
129 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC-TCAAAT
* *
18740172 GCTCTTTAAGGGGGTGTAAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
193 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAG
* * * ** *
18740237 TACCAGCACCTATCGCACATCATGT-C-C-C-CTCCCCCGCCCCCCCGATCACCGGAACCCTAAT
257 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAAT
**
18740298 GCCGTCGGTCAGGTTCTCCGACGATGCTCCGACAATGGTGCCCCGACGAAGAAAAATGTGGCACC
322 GCCGTCGGTCAGGTTCT-C--CGA---T--G---ATGGTGCCCCGACGAAGAAAAATACGGCACC
* * *
18740363 AGCACATGCCCAAGCCCAGCATGTGCTACTGCAACCCTCAG-T-C--T--GA---T---C-----
376 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GCTCCGGTCCGATCTTAGACTGGGA
* * * *
18740411 -TG--------AT-CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCGCAAAACAAGCG
440 ATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * **
18740466 TGCGGGTGCTCAGCCGACCAGAGGGGCAGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTG
505 TGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTG
* * * ** * *
18740531 CGTGCTGTCGATCCTGCTGTCGCAACCCTTGGTCCAGTCCAATCTTAGGCTGGGAATGAACTCCA
570 CGTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCA
* * * *
18740596 TATGCCTAAGCCAACCGAC-AAATTGAGCGGGCGAGCGGGCGGTCAGGCACTACGTCGGCCAGAG
635 TATGCCTAAGCCAACCGACGAAA--GA---AGCGA--GGGCGGACGGGCACTACGTCGACCAGAG
* * *
18740660 AGACAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCCTATTTC
693 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
** * * * *
18740725 TGTGTGCCAATGCCATTTTCATGGCTTGTAAATTCGTAAAATGGTCCCTTAAGCCTTCACGTGAA
758 TGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
** *
18740790 GTTTCATGGCAAGACGACTAATTTTCTATTTCTCATGATTTTTAAAACTTTTTACGGTTC-GAG
823 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAG-G
**
18740853 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGGGCCAAACTTGGTAGACGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
18740918 TTTTGGTACGCACAAAAAAATTTAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG-A
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * *
18740982 AAAAGTGTCCCCATTTAAGACACTTTAATTGCTATTGGCAGCAAACCTGTAAATTCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
18741047 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTAC
* * *
18741112 CAGCACCCATCACACATCATGTGCGCACA-CCCCCCGCCCCCCCCGATCGTCGGAACCTCAATGC
260 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCG-ACCCCCCGATCGTCGGAACCCCAATGC
* *
18741176 C-ACAGGTCAGGTTCTCCGACGATGCTCTGGCGATGCTCCGGCGATGGTGCCCCGATTAAGAAAA
324 CGTC-GGTCAGGTTCT-C--CGATG--AT-G-G-TGC-CC--CGA--------CG---AAGAAAA
** ** * ** *
18741240 ATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTTGCAACCCTCGGTCCAATCTGATCTT
366 ATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTT
* * **
18741305 AGACTGGGAATGAACTTCGTATGCTTATTCTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
431 AGACTGGGAATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * * * **
18741370 AAACGAGGGTGCGGGCACTCAGCAGGCCAGAGGGGAGTGATGCGCAAGCCAAGGATCGACCGGGT
496 AAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGT
** * * * * ** * *
18741435 CCCCCTCTATGTGCTGCCTATCCTGCTACCATAACCCTCGATCTGGTCCGATCTTAGAGTGGGAA
561 CCCCCTCTGCGTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAA
** * * * *
18741500 TGAACTCGGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGCGGGCGGGCACTACGCC
626 TGAACTCCATATGCCTAAGCCAACCGACGAAA-GA--AG-C--GAGGGCGGACGGGCACTACGTC
** * * *
18741565 GGTCAGAGAGACGGGATGCACAAGCCGTGGAGCAATAGGGTGGTAGGTGGGTTTAGGCACATCTT
685 GACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *** * * *
18741630 CATATTCCTGTGGGCCAATGCCAATTTTATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTT
750 CATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * *
18741695 CACGTGAAGTTTCATGGAAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
815 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGG
18741760 TTC-GAG
880 TTCAG-G
* * *
18741766 ATTTTTTAAAATTTTTTAGGAAGGAGTTTTGGCCCCAACCTTGGTAGATGTGATCCTTGTA-TTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
18741830 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
18741895 AAAAGTGTCCCCATTTCAGACACTTTAATTGCTATTGGCAGCAAACCTATAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
18741960 CTTCAAGGGGGCGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTAC
* * ** * *
18742025 CAGTACCCATCGCATATCATGTGCGCACACCCCCTGGCCCCCCCGATCGTTGGAACCCCAATGCC
260 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAAT---
* * *
18742090 GCCGATCAAGTTCTCCAGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
322 GCCG-TC--G--GT-CAG-G-TTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGC
* * *
18742155 ACATTCTCGAGCCCAGCATGTGCTGCCGCAA-CCT---T-C-G---G-TC-T-GA-T----CTG-
379 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGA
* *
18742202 A-T--CT-TG----GACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCG
444 ACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * * ** **
18742259 GGCACTCAACCGACCAAAGGGGCGGGA-GACGCAAACAGGGGATCGGTCGGGTCCCCCTCCACGT
509 GGCGCTCAACCGGCCAGAGGGGCGGGATG-CGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGT
** * * * ** *
18742323 GCTACCGATCCTGCTGCCGCAACCCTTGATCTGGTTTGATCTTAGACTGGGAATGAACTCCGTAT
573 GCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATAT
* *
18742388 GCCTAAGCCAACCGACG--A-AA-CGA--GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATG
638 GCCTAAGCCAACCGACGAAAGAAGCGAGGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATG
*
18742447 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAA
703 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
* *
18742512 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCACGTGAAGTTTCATGGC
768 TACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* *
18742577 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTAGG
833 AAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * *
18742630 ATTTTTTAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTA-TTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
18742694 TTTTGGCATGCAA-AAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGA
66 TTTTGGCATG-AACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
18742758 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCAAACCTATAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * * * *
18742823 TTTTTAAGGGGGTGTCAATTCTCAAGGTTTGATGAGGGATAGGGGGCCATTGTAACGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA
* * ** *
18742888 CCAGCACCCATCGCACATCATGTTCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCTGACG
259 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCC-GACCCCCCGATCGTCGGAACCCCAATG
* * * * *
18742953 CCACCGGTCAGGTTATCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCA
323 ---CC-GTC-GG---T-CAG-G-TTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCA
* * * * * ** * * * *
18743018 GCACATGCCCAAGCCTAGCTTGTGCTGCCGCAATCCTCGGTCCATTCTGATCTTAGAGTAGCAAT
377 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAAT
* * * *
18743083 GAACTCCGTATGCTTACACTGGGAATGAACCCCGTATGCCTAAGTCAACCCACGAAACGAGCGTA
442 GAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * *
18743148 CGGGCGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCTCCCTCTGCG
507 CGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCG
** * * * * *
18743213 TGCTACCGATCATGCTGCCACAACCCTCGGTCTGGTCCAATCTTAGACAGGGAATGAATTTCATA
572 TGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATA
* *
18743278 TGCCTAAGCCAACCGACG--A-AA-CGA--GCGGGCGGGCACTACGTC-AGCCAGAGAGATGGGA
637 TGCCTAAGCCAACCGACGAAAGAAGCGAGGGCGGACGGGCACTACGTCGA-CCAGAGAGACGGGA
* * * * *
18743336 TGCCCAAGCCGTGGATCGATAGGGTGGTACGTGGGCTTAGGCACATCTTCATATTTTTGCGTGCC
701 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* ** *
18743401 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACAAGAAGTTTCAAG
766 AATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * *
18743466 GCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCAAG
831 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * * *
18743521 ATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCACCAAACCTGGTAGACGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
** *
18743586 TTTCAGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
18743650 AAAAGTGTCCCCATTTCAGACACTTTAAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAGTGTCCCCATTTCAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * *
18743715 TCTTTAAGGGGGTGTGTGTTCTCGAGATTTGATGAGAGATAGGTGGCCACTATCAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTA
* * * *
18743780 CTAGCACCCATCGCACATCATGTGCGCACACCTCCCCAACCCCCGGATCGTC-GAACCCCAATGC
259 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATGC
* * *
18743844 CGCCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGGACCAGCACATGCCTGA
324 CGTCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGA
*
18743909 GCCC-GCATGTGCTGCCGCAACCCTCGCTTCGGTCCGATCTTAGACTGGGAATGAACTCCCTATG
389 GCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGAACTCCCTATG
** * * *
18743973 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCAAAAAAC-AACGTGCGGGCGGTCAGC
454 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * *
18744036 CGGCCAGAGGGGCGGGATGCGCATG-CGAGGATCGGCTGGGTCCCCCTCTGCGTGCTGTCGATCA
519 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCA
* * * *
18744100 TGCTACCCCAACCCTCGGTCTGATCCGATC-TAGACTGGGAATGAACTCCTTATGCCTAAGCCAA
584 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* *
18744164 CCGACGAAATGAACGGGCGAGTGGACGGACGGGCACTACGCCGACCAGAGAGACGGGATCCGCAA
649 CCGACGAAA-GAA---GCGAG-GG-CGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCAA
*
18744229 G-CGATGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACC
708 GCCG-TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACC
*
18744293 ATTTTTATGGCTTGT-AATTCGTACAATGGT-CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
772 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
18744356 CGACTCGTTTTCTATTTTTCACGATTTTCAAAAACTTTTTACGGTTCAAG
837 CGACTCGTTTTCTATTTTTCATGATTTT-TAAAACTTTTTACGGTTCAGG
* *
18744406 ATTTTTTAAAATTTTTTCGTAAGGATTTTTGGCCCCAAACTT-GTAGACGTGATCCTTGGTA-TT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT-GTATTT
* *
18744469 TTTTTGGCATGAA-AAAAAAATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTCACCATTTGA
65 TTTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
18744533 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAACCTATAAAATCTCAAATGC
130 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * * *
18744598 TTTTTAAGGGGGTGTGTGTTCTCGAGGTTTAATGAGAGATAGGTGGCCACTATCAGGGCCAAGTA
195 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGCCAATATAAGGGCCAAGTA
* * *
18744663 CTAGCACCCATCGCACATCATGTGCGCACACCTCCCCAACCCCCCGGATCGTCGGAACCCCAATG
259 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCC-GATCGTCGGAACCCCAATG
* * *
18744728 CCGTCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATATGGGACCAGCACATGCCTG
323 CCGTCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
* *
18744793 AGCCCAGCATGTGCTGCCGCAACCCTCGCTCCAGTCTGATCTTAGACTGGGAATGAACTCCCTAT
388 AGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGAACTCCCTAT
** * * *
18744858 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAAAAAACAAGCGTGCGGGCGGTCAG
453 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA
* * * * *
18744923 CCGGCCAGAGGGGTGGGATGCGCATGCCGAGGATCGACCGGGTCCCCCTCTGCATGCTGTTGATC
518 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
18744988 ATGCTACCCCAACCCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCCTTAAGCCTAAGCCA
583 ATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCA
*
18745053 ACCAACGAAATGAACGGGCGAGTGGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCA
648 ACCGACGAAA-GAA---GCGA--GGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCA
* * *
18745118 AGCCATGGATCGATAGGGTGGTCGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCAATACC
707 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACC
18745183 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
772 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
18745248 TGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGG
837 CGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* *
18745297 ATTTTTTAAAATTTTTTCGTAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
18745362 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
18745427 AAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
18745491 CTTTAAGGGGGTGCGAGTACTTGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTAC
* *
18745556 CAGCACCCATCGCACATCATGT--GCACA----CAC--CCCCCCGA-C--C---ACCCCGAT--C
260 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATGCC
* * *
18745605 GTCGGT---G--C-CC--TGA---T--------GAAGAAAAATGCGGCAACAGCACATGCCTGAG
325 GTCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* * *
18745651 CCCAACATGTGCTACCGCAACCCTCAG-TCTGGTCCGATC-T----T----A-G--------A--
390 CCCAGCATGTGCTGCCGCAACCCTC-GCTCCGGTCCGATCTTAGACTGGGAATGAACTCCCTATG
* ** * * *
18745695 C-T--A---GGAATGAACTTCGTATGCCTAAGTCAACCCATTAAACGAGCGTGTGGGCGCTTATC
454 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * * * ** * * * * * *
18745754 CGGCCAGAGGGACGGGGTGTGCAAGCCGGGGATCGTCTTGGTTCCCC-CTACATGCTG-CCAACC
519 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCA
* * * * * *
18745817 TACTGTCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
584 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
* * * * * *
18745882 CCGACGAAATGAGTGGGCGGGCAGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
649 CCGACGAAA-GA-AGCGAGGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCG
* * * ** *
18745947 TGGATCGATAGGGTGGTAGGCGGGTGTAGGCATATCTTCATATTTCTGCATTTCAATGCCATTTT
712 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTT
* ** *
18746012 TATGGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCGTGTTAAGTTTCATGGCAAGACGACT
777 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* ** *
18746077 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGGG
842 CGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
* * *
18746121 ATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCC-AACTTGGTAGACATGATACTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
18746185 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCATTTGAA
66 TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
18746250 AAAAGTGTCACCATGTCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
131 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
18746315 CTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTAC
196 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-AGGGGCCAATATAAGGGCCAAGTAC
* * *
18746380 CAGCACCCATCAG-ACATCATGTGCACACACCCCCTCGGCCCCCCGATCG-CTGGAACCCCAATG
260 CAGCACCCATC-GCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTC-GGAACCCCAATG
* * * * *
18746443 CCGCCGGTCAGGTTCTCCGACGATGATGCCCCGACGAAGAAAAATACGACACCAGCATATGCCCG
323 CCGTCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
* * * * *
18746508 AGCCCAGCATGTGCTGCCACAACCCTCGATCCGGTCCGATCTTAGACTGAGAATGAACT-TCGAC
388 AGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGAACTCCCTA-
* *
18746572 TGCTTAGATTGGGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
452 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * *
18746637 ACCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGATCGGGT-CCCCTCTGTGTGCTGTCGAT
517 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGAT
* *
18746701 CCTGCTGCCGCAA-CCTCGGTCTGG-CCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAAA
582 CATGCTGCCGCAACCCTCGGTCTGGTCC-GATCTTAGACTGGGAATGAACTCCATATGCCT-AAG
* *
18746764 CC-ACCGACGAAACAAGC--GGGC--A--GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
645 CCAACCGACGAAAGAAGCGAGGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGC
**
18746822 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAA-AGCCAT
710 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATA-CCAT
* *
18746886 TTTTATGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTTGACGTGAAGTTTCATGGCAAGACG
774 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
18746951 ACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGG
839 ACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
*
18746998 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTCGACGTGATCCTTGTATTTT
1 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * *
18747063 TGTTGGCAT-ATGCAAAAAAATTCAGATAAAAACTTGAAGTGTACATGATTTTGTGACCATTTGA
66 TTTTGGCATGA-ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
18747127 AAAAAGTGTCCTCATTTC-GAACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
130 AAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
18747191 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTATGATGAGGGATAGAGGGCCAATATAAGGGCCAAGT
194 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG-GGGCCAATATAAGGGCCAAGT
* * **
18747256 ACCGGCACCCATTGCACATCATGTGCGCACA-CCCCCCGACCCCCCTCGATCCCCGGAACCCCAA
258 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA-CCCCC-CGATCGTCGGAACCCCAA
* *
18747320 TGCCGTCGGTCAGGTTCTCCGACGATGCTCTGGTGATGGTGCCCC-AGCGAAGAAAAATGCAGCA
321 TGCCGTCGGTCAGGTTCT-C--CGA--------TGATGGTGCCCCGA-CGAAGAAAAATACGGCA
* * * * *
18747384 CCAGCACATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCTGATCCGATCTTAGACTGGG
374 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGG
* * * *
18747449 AATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGC
439 AATGAACTCCCTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
** * **
18747514 GTGCAAGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGAGATCGACCGGGTCCATCTCT
504 GTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCT
* * * * * * * * * * *
18747579 GTGTTCTGCCGATCCTGCTACTGTAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTTC
569 GCGTGCTGTCGATCATGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCC
* * *
18747644 GTATACCTAAGTCAACC
634 ATATGCCTAAGCCAACC
18747661 CACCAAACGA
Statistics
Matches: 13718, Mismatches: 1544, Indels: 950
0.85 0.10 0.06
Matches are distributed among these distances:
823 97 0.01
824 367 0.03
825 2 0.00
826 6 0.00
828 67 0.00
829 9 0.00
830 87 0.01
832 8 0.00
833 2 0.00
834 1 0.00
835 1 0.00
836 1 0.00
838 8 0.00
840 6 0.00
843 1 0.00
845 1 0.00
846 3 0.00
847 1 0.00
848 2 0.00
851 2 0.00
855 1 0.00
856 60 0.00
857 1 0.00
858 1 0.00
859 60 0.00
860 1 0.00
862 1 0.00
864 474 0.03
865 104 0.01
866 177 0.01
867 5 0.00
868 2 0.00
869 4 0.00
870 6 0.00
871 3 0.00
872 146 0.01
873 115 0.01
874 386 0.03
875 111 0.01
876 1463 0.11
877 504 0.04
878 305 0.02
879 85 0.01
880 7 0.00
881 9 0.00
882 11 0.00
883 149 0.01
884 184 0.01
885 302 0.02
886 446 0.03
887 292 0.02
888 44 0.00
889 73 0.01
890 383 0.03
891 649 0.05
892 460 0.03
893 77 0.01
894 28 0.00
895 32 0.00
896 7 0.00
897 383 0.03
898 524 0.04
899 1076 0.08
900 758 0.06
901 673 0.05
902 321 0.02
903 153 0.01
904 66 0.00
905 21 0.00
906 625 0.05
907 76 0.01
908 3 0.00
909 199 0.01
910 291 0.02
911 7 0.00
912 66 0.00
913 600 0.04
914 8 0.00
915 3 0.00
916 6 0.00
917 1 0.00
918 2 0.00
919 3 0.00
921 5 0.00
922 3 0.00
923 2 0.00
924 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (885 bp):
ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
TTTTGGCATGAACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACC
AGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCGTCGGAACCCCAATGCCG
TCGGTCAGGTTCTCCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGC
CCAGCATGTGCTGCCGCAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGAACTCCCTATGCT
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCG
GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCATG
CTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACC
GACGAAAGAAGCGAGGGCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG
Found at i:18747467 original size:26 final size:26
Alignment explanation
Indices: 18747438--18747490 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18747428 CTGATCCGAT
*
18747438 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
18747464 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
18747490 C
1 C
18747491 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:18747751 original size:159 final size:159
Alignment explanation
Indices: 18747464--18747839 Score: 432
Period size: 159 Copynumber: 2.4 Consensus size: 159
18747454 ACTCCGTATG
* **
18747464 CTTAGACTAGGAATGAAC-TCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAAGCGCTCAA
1 CTTAGACTAGGAATGAACTTC-GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA
* * * * * **
18747528 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGAGATCGACCGGGTCCATCTCTGTGTTCTGCCGATC
65 CCGGCCAGAGGGGCGAGATGCACAAGCCGGAGATCGACCGGGTCCACCGCTGCGCGCTGCCGATC
* * * * **
18747593 CTGCTACTGTAACCCTCGGTCCGGTCTGAT
130 CTACTACCGCAACCCTCGGTCCAGTCCAAT
* * *
18747623 CTTAGACTAGGAATGAACTTCGTATACCTAAGTCAACCCACCAAACGAGCGTGCGGGCGTTCAAC
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
* * *
18747688 CGGCCAGAGGGGCGAGATGCACAA-CTCGGGGATCGACCGGGTCCCCCGCTGCGCGCTGTCGATC
66 CGGCCAGAGGGGCGAGATGCACAAGC-CGGAGATCGACCGGGTCCACCGCTGCGCGCTGCCGATC
* * *
18747752 CTACTGCCGCAACCCTTGGTCTAGTCCAAT
130 CTACTACCGCAACCCTCGGTCCAGTCCAAT
* * * * * * *
18747782 CTTAGATTGGGAATCAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
18747840 AGGTGGGCAC
Statistics
Matches: 181, Mismatches: 34, Indels: 4
0.83 0.16 0.02
Matches are distributed among these distances:
158 1 0.01
159 178 0.98
160 2 0.01
ACGTcount: A:0.23, C:0.30, G:0.28, T:0.19
Consensus pattern (159 bp):
CTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
CGGCCAGAGGGGCGAGATGCACAAGCCGGAGATCGACCGGGTCCACCGCTGCGCGCTGCCGATCC
TACTACCGCAACCCTCGGTCCAGTCCAAT
Found at i:18749417 original size:26 final size:26
Alignment explanation
Indices: 18749388--18749440 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18749378 CCGGTCCAAT
18749388 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
*
18749414 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
18749440 C
1 C
18749441 CTACGAAACG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:18749946 original size:891 final size:882
Alignment explanation
Indices: 18747665--18751033 Score: 4123
Period size: 853 Copynumber: 3.8 Consensus size: 882
18747655 TCAACCCACC
* * * * *
18747665 AAACGAGCGTGCGGGCGTTCAACCGGCCAGAGGGGCGAGATGCACAA-CTCGGGGATCGACCGGG
1 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACACAAGC-CGGGGATCGATCGGG
* ** * * * * *
18747729 TCCCCCGCTGCGCGCTGTCGATCCTACTGCCGCAACCCTTG-GTCTAGTCCAATCTTAGATTGGG
65 TCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGATTC-GGTCCAATCTTAGACTGGG
* * * * *
18747793 AATCAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGTGGGCACTACGTCGG
129 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAG
* *
18747858 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACCTCTTCA
194 CCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* * * * *
18747923 TATTCCTGCATGCTAATGCCATTGTTATGG-TGTGTAAATTCATACAGTGGTCCCTTAGGCCTTC
259 TATTTCTGCATGCCAATGCCATTTTTATGGCT-TGTAAATTCATACAATGGTCCCTTAAGCCTTC
*
18747987 GCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGT
323 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGT
* * * *
18748052 TCGAGATTTTTTAAAATTTTTTCGAAAGGATTTTTGGCCCCAAACATGGTAGACATGATCCTTGT
388 TCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* *
18748117 ATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACATGATTTTGTGACCAT
453 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
* * * *
18748182 TTGAAAAACGTGTCACCATGTCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAA
518 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
18748247 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
583 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * *
18748312 AGTACCAGCACCCATCGCACATCATGTGCCCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCA
648 AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-ACCCCCGATCGTCGGAACCCCA
* ** ** * *
18748377 ATGCTGCCGGTCAGGTTCTCCGGTAATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATGCGGCA
712 ATGCTGCCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGT-CCCCGACGAAGAAAAATGTGGTA
* * *
18748442 CCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAAACCTCT-GTCCGGTCTGATCTTACACTGG
776 CCAGCACATGCTCGAGCCCAGCATGTGCTG-CG-CAACCT-TGGTCCGGTC--ATCTTAGACTGG
* *
18748506 GAATGAACTCCGTTTGCTTAGACTGGGAATGATCCCCGTATGCCTAAGTCAACCCACG
836 GAATGAACTCCGTATGCTTAGACTGGGAATGA-CTCCGTATGCC----T------ACG
* * * *
18748564 AAACGAACGTGCGGGCGCTCAGCCGGGCAGAGGGACGGGATACACAAG-CGAGGGTTCGATCGGG
1 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACACAAGCCG-GGGATCGATCGGG
* * *
18748628 CCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAATCCTCGA-TC--T--AATCTTAGACTAGGA
65 TCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGATTCGGTCCAATCTTAGACTGGGA
* * * *
18748688 ATGAACACCGTATGCCTAAGCCAACCGAC-AGAACAAACGGGTGGGCGGGCGGGCACTACGCC-G
130 ATGAACTCCGTATGCCTAAGCCAACCGACGA-AACGAGCGGGCGGGCGGGCGGGCACTACGCCAG
* * * * *
18748751 ACCAGAGAGACGAGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCCTC
194 -CCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
** ** * *
18748816 ATATTTCTGTGTGCCAATGTGATTTTTATGGTTTGTAAATTAATACAATGGTCCCTTAAGCCTTC
258 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* *
18748881 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAGTTTTTGCGGT
323 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGT
* * *
18748946 TCGGGATTTTTTAAAGTTTTTTTC-GAAGG-GTTTAGGCCCCAAACTTGGTAGACGTGATCCTTG
388 TCGAGATTTTTTAAA-ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
18749009 TATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACACGAAGTGTACAAGATTTTGTGACCA
452 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
18749074 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCA
517 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
18749139 AATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCC
582 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * *
18749204 AAGTGCCAGCACCCATCGCAAATCGTGGGCGCACACCCCCCGGACCCCCGATCGTCGGAACCCCA
647 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCCCCGATCGTCGGAACCCCA
18749269 ATGCTG-CGAGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTTCCCCGACGAAGAAAAATGTGGT
712 ATGCTGCCG-GTCAGGTTCTCTGGCGATGCTCCGGCGATGG-TCCCCGACGAAGAAAAATGTGGT
18749333 ACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCCAATCTTAGACTGG
775 ACCAGCACATGCTCGAGCCCAGCATGTGCTG-CGCAA-CCTTGGTCCGGT-C-ATCTTAGACTGG
*
18749398 CAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTACG
836 GAATGAACTCCGTATGCTTAGACTGGGAATG-ACTCCGTATGCCTACG
* * * * * *
18749446 AAACGAGCGTGCGGACGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGT
1 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACACAAGCCGGGGATCGATCGGGT
* *** **
18749511 CCCCCTCTGCATGCTGTCGATCTTGCTATTGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAA
66 CCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGATTCGGTCCAATCTTAGACTGGGAA
* *
18749576 TAAACTCCGTATGCCTAAGCCAACCGACGAAA-GAAGCAGGCTGGCGGGCGGGCGGGCATTACGC
131 TGAACTCCGTATGCCTAAGCCAACCGACGAAACG-AGC--G--GGCGGGCGGGCGGGCACTACGC
* *
18749640 CAGCCAGAGAGACGGGATGCGAAAGCTGTGGATCGATACGGTGGTAGGTGGGTTTAGGCACATCT
191 CAGCCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
18749705 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
256 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * ** *
18749770 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAGTTTTCAAGATTTTTGAAACTTTTTGTG
321 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCG
* **
18749835 GTTCGAGATTTTTTAAAATATTTTCGGAAGGAGTTTTGGAACCAAACTTGGTAGACGTGATCCTT
386 GTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* *
18749900 GTATTTTT-TTGGCAAGCACAAAAAAATTCAGCGAAAAACTCGAAGTGTACAAGATTTTGTGACC
451 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
*
18749964 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTC
516 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
18750029 AAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATATGGGGCCAATATAAGGGC
581 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
*
18750094 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGACCACCCCGATCGTCGG--T
646 CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGA-C-CCCCGATCGTCGGAAC
* ** * ***** ** * * * ** *
18750157 GCC----CTG-AAG--AAGAAAAAT-GCG--GCAACAGCAAAT-G--CCTGAGCCCAG---CATG
708 CCCAATGCTGCCGGTCAGGTTCTCTGGCGATGCTCCGGC-GATGGTCCCCGA-CGAAGAAAAATG
* *
18750206 TGCTACC-GCA-A--C-C---CTC-G---GT-CTG-G------T--T-C-G--ATCTTAGACTGG
771 TGGTACCAGCACATGCTCGAGCCCAGCATGTGCTGCGCAACCTTGGTCCGGTCATCTTAGACTGG
*
18750245 GAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTACG
836 GAATGAACTCCGTATGCTTAGACTGGGAATG-ACTCCGTA----T--G----CCTACG
* * * ** * * * *
18750303 AAACGACCGTGCGGGTGCTCAGCCGGCCAAAGGGGCGGGATATGCAAGTCGAGGATCTATTGGGT
1 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACACAAGCCGGGGATCGATCGGGT
* * * * * * * * *
18750368 CCCACTCTACGTGCTGGT-GATACTGTTGTCGTAACCCTCGATCCGATCCAATCTTAGACTGGGA
66 CCCCCTCTGCATGCT-GTCGATCCTGCTGCCGCAACCCTCGATTCGGTCCAATCTTAGACTGGGA
* * * *
18750432 ATGAACTCCGTATGCCTTAGCCAACTGACGAAACGAGCGGGCGGGTGGGCGGGCACTACGTCAGC
130 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGC
*
18750497 CAGAGAGACGGGATGC-ACAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCA
195 CAGAGAGACGGGATGCGA-AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* * *
18750561 TATTTCTCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTAA
259 TATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * * *
18750626 CGTGAAGTTTCATGGAAAAACGACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTACGGTT
324 CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTT
* * * *
18750691 TGGGATTTTTTAAAATTTTTTTGGAAGGAATTTTGGCCCCAAA-TTGGTAGACGTGATCCTTGTA
389 CGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* *
18750755 TTTTTGTTGGCATGCACAAAAAAGTTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATT
454 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * *
18750820 TGAAAAAAGTGTCCCCATTTCAGATACTTTAATGGCTATTGGCAACAAACCTGTAAAATCTCAAA
519 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
*
18750885 TGCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
584 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAA
* * *
18750950 GTACCAGCACCCATCGCACATCATGTGTGCACACCCCCTGGCCCCCCTGATCG-CTGGAACCCCA
649 GTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCCCC-GATCGTC-GGAACCCCA
*
18751014 ATGCTGCCGCTCAGGTTCTC
712 ATGCTGCCGGTCAGGTTCTC
18751034 CGACGATGGT
Statistics
Matches: 2163, Mismatches: 249, Indels: 155
0.84 0.10 0.06
Matches are distributed among these distances:
847 50 0.02
850 5 0.00
851 10 0.00
852 35 0.02
853 449 0.21
855 2 0.00
857 142 0.07
858 3 0.00
860 2 0.00
862 1 0.00
864 3 0.00
865 2 0.00
868 1 0.00
869 2 0.00
872 1 0.00
873 1 0.00
875 1 0.00
876 3 0.00
877 9 0.00
879 4 0.00
880 3 0.00
882 96 0.04
883 6 0.00
884 3 0.00
885 4 0.00
887 45 0.02
888 5 0.00
889 1 0.00
890 6 0.00
891 428 0.20
892 214 0.10
893 258 0.12
894 270 0.12
895 8 0.00
896 1 0.00
898 2 0.00
899 87 0.04
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (882 bp):
AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACACAAGCCGGGGATCGATCGGGT
CCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTCGATTCGGTCCAATCTTAGACTGGGAA
TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCC
AGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCG
AGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGACCCCCGATCGTCGGAACCCCAATGC
TGCCGGTCAGGTTCTCTGGCGATGCTCCGGCGATGGTCCCCGACGAAGAAAAATGTGGTACCAGC
ACATGCTCGAGCCCAGCATGTGCTGCGCAACCTTGGTCCGGTCATCTTAGACTGGGAATGAACTC
CGTATGCTTAGACTGGGAATGACTCCGTATGCCTACG
Found at i:18750264 original size:26 final size:26
Alignment explanation
Indices: 18750235--18750287 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18750225 CTGGTTCGAT
*
18750235 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18750261 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18750287 C
1 C
18750288 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18751883 original size:26 final size:26
Alignment explanation
Indices: 18751847--18751899 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18751837 CTTGTCCGAT
*
18751847 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18751873 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18751899 C
1 C
18751900 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18753253 original size:898 final size:894
Alignment explanation
Indices: 18751132--18757242 Score: 7001
Period size: 898 Copynumber: 6.9 Consensus size: 894
18751122 GTTCGGTCCA
* *
18751132 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGATGAAAC--GAGCGGGCAGACGGG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGAGCGGGCGGACGGG
* *
18751195 CAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACG-CCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
18751260 TTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGG
130 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
*
18751325 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCA
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
* * * *
18751390 AAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAATTTTGGCCCCAAA-TTGGTA
260 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
18751454 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAGTTCAGCTAAAAATTCGAAGTGTACAA
325 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
18751519 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* *
18751584 TTGTAAAATCTC-AATGCTCTTTAAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
455 CTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* *
18751648 CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCCG
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA------CAGCCCCCCG
* * * * * *
18751713 ATCGCCGGAACCCCAATGCCGTTGGCCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGCG
578 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCTCGGCG
* * * * *
18751778 AAGAAAAATGTGGCACCAGCACATGCCCGAGCCAAGCATGTGCTGCCACAACCCTC-GGTCTTGT
643 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTC-GGT
* *
18751842 CCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
707 CCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * *
18751907 AACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGGCAGAGGGGCGGGATGCGCAA-CCTAGGGAT
772 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC-GGGGAT
* * * * ** *
18751971 CGATCGGGTCCCTCTCTGCTTGCTACCGATCCTACTACCGTAATGCTCGGTCTGGTCTG
836 CGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTGTCTGGTCTG
* *
18752030 ATCTTAGACTGGGACTGAACTCCATATGCCTAAGCCAACCGATGAAAC--GA-------G-CGGG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGAGCGGGCGGACGGG
* *
18752085 CGGGCACTATGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGTT
66 CGGGCACTACGCC-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * * * * *
18752150 TTAGTCACATCTTCATATTTCTACGTACCAATGCCATTTTTATGGCTTGTTAACTCATATAATGG
130 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
18752215 TGCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTCA
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
* * *
18752280 AAACTTTTTACGGTTCGAGATTTTTCAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTA
260 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * * *
18752345 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATACAACTAAAACCTTGAAGAGTACAA
325 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
18752410 GATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
18752475 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
*
18752540 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACAGCCCCCCGATCGTCG
520 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACAGCCCCCCGATCGCCG
* *
18752605 GAACCCCAATGCCATCGGTCAGGTTCTCCAGCGATGCTCCGGCGATAGTGCCTCGGCGAAGAAAA
585 GAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCTCGGCGAAGAAAA
* * * *
18752670 ATGTGGCACCAGCACATGCCCGAGCCCAGGATGTGCTGCCGTAACCCTCAGTTCGGTCCGATCTG
650 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTCGGTCCGATCTT
* * * * *
18752735 ACACTGGGGAATGAACTCCATATGCTTAGATTAGGAATGAACTCCGTATGCGTAAGTCAACCGAC
715 AGACT-GGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * *
18752800 GAAACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGTGGGATGTGCAAGCCGGGGATCGGTCGGG
779 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG
* * * * *
18752865 TCCCCCTCTACGTGTTGCCGATCCTGCTGCCGTAACCCTCTATCTGGTCTG
844 TCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTGTCTGGTCTG
* * * *
18752916 ATCTTATACTAGGAATGAACTCCGTATGCTTAAGCCAACCGATGAAACGAGCAAGCGGGCGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAG--AGCGGGCGGACG
* * *
18752981 GGCGGGCACTATGCCGCCCAGAGAGACGGGATGCGCAATCTGTGGATCGATAGGGTGGTAGGTGG
64 GGCGGGCACTACGCCG-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * * *
18753046 GTTTAGCCACATCTCCATATTTCTACGTGCCAATGCCAATTTTATGGCTTGTAAATTCATACAAT
128 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
18753111 GGTCCCTTACGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * * *
18753176 TGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTAGG
258 CAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * *
18753241 TAGACTTGATCCTTGTATTTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTAC
323 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
18753306 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCGGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
18753371 ACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGACGTTTGATGAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
18753436 GCCAATATAAGGGCCAAGTACCA-CACCCATCACACATCATGTGTGCACACCCCCCCGGCCCCTC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA------CAGCCCC-C
* * * * *
18753500 CGATCACC-GAACCCTAATGCCGCCGGTCAGGTTCTCC-GACGATGCTCCGGTGATGGTGCCCCG
576 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAG-CGATGCTCCGGCGATGGTGCCTCG
* * * *
18753563 GCAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCG
640 GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTCG
* * * *
18753628 GTCTGATCTTAGATTTGGAATGAACT-CAGTATGCTTTGACTGGGAATGAACTCCGTATGCCTAA
705 GTCCGATCTTAGACTGGGAATGAACTCCA-TATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * * *
18753692 GCCAACCCATGAAACGAGTGTGCGGGCGCTCAGTCGGCCAGAGTGGCGAGATGCGTAACCCGGGG
769 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * * * * * *
18753757 ATCAGTTGGGTCCCCCTCTACGTGCTACTGATCCTGCTGCCGCAACCCTCTATCCGGTCCG
834 ATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTGTCTGGTCTG
* * * * *
18753818 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAATGAGTGGGCGAGCAGACG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA--GAGCGGGCGGACG
* * * * * ** *
18753883 GGCGGGCGCTACGTCGGCAAAGAGACGGGATGCTCAAGCCGCAGATCGATAGGCTGGTAGGTGGG
64 GGCGGGCACTACGCCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * *
18753948 TTTAGGCACATCTTCATATTTATGCATGCCAACGCCATTTTCATGGCTTGTAAATTCATACAATG
129 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
*
18754013 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * * *
18754078 AAAACTTTTTGCAGTTCCG-GATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCGAAACTTGG
259 AAAACTTTTTACGGTT-CGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
18754142 TAGACATGATCCTTGTATTTTTATTGGCATGCATAAAAAAATTCATCTAAAAACTCGAAGTGTAC
323 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
18754207 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGCCAACAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
18754272 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGT
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
18754337 GCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCAGGTGTGCACACACCCCCCTCGGCTC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA--TGTGCGCACA-------CAGC-C
* * * *
18754402 CCTCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGTGATGCTCCGACGATGGTGCCT
573 CCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCT
* * * * * * *
18754467 CGACGAAGAAAAATGCGGCACCAGCACTTGCTCGAGCCCAGCATGTGTTGTCGCAACCCTCGGTC
638 CGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTT
* * * * * *
18754532 CGGTCTGATATTAGACTAGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTA
703 CGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
18754597 AGTCAACCGACAAAACGAGCGTACGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
768 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * ** * *
18754662 GATC-GACTGGGTCCCCCTCTGTGTGCTACAGATCCTGCTACAATAACCCTCGGTCGGGTCTG
833 GATCGGTC-GGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTGTCTGGTCTG
* * *
18754724 ATCTTATAATGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAAAGGGCGGGC-G-CG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACG--AGAGCGGGCGGACG
* * * * *
18754787 AGCGGGCACTATGCTGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGTGTGGTAGGTGG
64 GGCGGGCACTACGC-CGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * * *
18754852 GTTTAGGTACATCCTCATATTTCTGCATGCCAATACCATTTTTATGGGTTGTAAATTCAAACAAT
128 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
18754917 GGTCCCTTTAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTCTCTATTTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * ** * * *
18754982 TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAATAAGTTTTGGTCCCAAAATAGG
258 CAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
18755047 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAGGTCTAC
323 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
18755112 AAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
18755177 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATTAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
18755242 GCCAATATAAGGACCAAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCCCAGGCCCCCC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CA---CACA-GCCCCCC
* * * * * * *
18755307 AGATTGCCGGAACCCTAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCTGGCAATGGTGCCTCGG
577 -GATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCTCGG
* * *
18755372 CGAAGAAAAATGCGACACCAGCATATGCCCGAGCCCAGCATGTGCTGCCGCAA----CACTT--G
641 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTCGG
*
18755431 ---G----T---CT--G---G---TCC-GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
706 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * ** ** * * *
18755476 CAACCCACGAAACAAGCGTACGGGAACTCAGCCGATCAGAGGGGTGGGATTCGCAAGCCGAGGAT
771 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * * * *
18755541 CGGCCAGGTCCCCCTCTGCATGCTGCCAATCCTGCTACCGCAATCCTCTGTCTGGT-TCA
836 CGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTGTCTGGTCT-G
* *** * * * *
18755600 ATCTTGGACAATGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGTGGATG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAG-AG-CGGGCGGACG
** *
18755665 GGCGGGCACTACGTCAACTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
64 GGCGGGCACTACG-CCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
18755730 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGGTTGTAAATTCATACAAT
128 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
18755795 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCTAGACGACTCGTTTTCTATTTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * *
18755860 TGAAAGTTTTTACGGTTC-AGGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
258 CAAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* **
18755924 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-TAAAAAATTCAATTAAAAACTCGAAGTGTA
322 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
*
18755988 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCA
387 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
18756053 AACCTGTAAAGTCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GG
452 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
18756116 GGCCAATATAAGGGCCCGAAAGTAAGTACCAGCAGCCATTGCACATCATGTGCGCACAC--CCCC
517 GGCCAATATAAGGG-CC------AAGTACCAGCACCCATCGCACATCATGTGCGCACACAGCCCC
* * ** * * * * * *
18756179 CC---CG--GG-GCCCC---CCCGATC-GT-A-G--AACC-GCAATCCACTGATC-A-GGTTCC-
575 CCGATCGCCGGAACCCCAATGCCG-TCGGTCAGGTTCTCCAGCGATGCTCCG-GCGATGGTGCCT
** * ** * * * * * * * *
18756226 C-GCCCAG-TATGTGCTGC-CGCAAC-CCTCGATCC-AGTCCGATCATAG-ACTG-AG-AA---T
638 CGGCGAAGAAAAATGCGGCAC-CAGCACAT-G-CCCGAG-CCCAGCAT-GTGCTGCCGCAACCCT
** * * * * * ***** * *
18756280 --GAAC--TCCATATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAACCCACGAA--ACG
698 CAGTTCGGTCC-GAT-CTTAGACTGGGAATGAACTCCATATG-CTTAGACTGGGAATGAACTCCG
* * * * ** * * * **
18756339 -A-GCGTACGGGC-ACTCACCTG-GCCAGAG-GGGC-GG-GAT--G-C-GCAAGCCG---GGGAT
760 TATGCCTA-AGTCAACCCA-C-GAAAC-GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
18756390 --------C--GG--C--T-AGGTCCCCCTCTGCGTGCTGCTGATCCTACTACCGCAACCCTCGG
821 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTG
18756440 T-TCGGTCTG
886 TCT-GGTCTG
* * *
18756449 ATCTTAGACTAGGAATGAACTCCGTATGCCAAAGCCAACCGACGAAAC--GAGC--G-GG-CGGG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGAGCGGGCGGACGGG
* * * *
18756508 CAGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAGTCGTGGATCGATAAGGTGGTAGGTGGGT
66 CGGGCACTACGCC-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
18756573 TTAGGCACATCTTCATATGTT-TTCATTCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
** * * *
18756637 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATTACTCGTTTTCTGTTTTTCATGATTTTT
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * * * * * * *
18756702 GAAACTTTTTGCAGTTTGGGATTTTTTAAAAATTTTTCGGATGGATTTTTGGCCCCAAACTTGGT
259 AAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * *
18756767 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAATTGTACA
324 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
18756832 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTATTGGCCACTGCCAGCAAA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
18756897 CCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
18756962 CCAATATAAGGGCCAAGTACCAGCACCCATTGTACATCATGTGCGCACACCCCCCGGCCCCCCGA
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-----CAGCCCCCCGA
* * * * * **
18757027 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTTCGACGATGGTGCCCCGATGA
579 TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCTCGGCGA
* * * ** * *
18757092 AGAAAAATACGGCACCAGCACATGCCCGAACCCAGGATGTGCTGTTGCAACCCTCCG-TCTGGTT
644 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTC-GGTC
* * *
18757156 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCG
708 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
*
18757221 ACCCACGAAACGAGCGTACGGG
773 ACCCACGAAACGAGCGTGCGGG
18757243 TGTGAGTGTA
Statistics
Matches: 4472, Mismatches: 582, Indels: 345
0.83 0.11 0.06
Matches are distributed among these distances:
837 33 0.01
840 1 0.00
841 262 0.06
842 116 0.03
843 35 0.01
844 22 0.00
845 1 0.00
846 1 0.00
847 3 0.00
848 1 0.00
849 89 0.02
850 5 0.00
852 2 0.00
853 5 0.00
854 7 0.00
855 13 0.00
856 16 0.00
857 5 0.00
858 12 0.00
859 14 0.00
860 5 0.00
861 12 0.00
862 13 0.00
863 6 0.00
864 10 0.00
865 3 0.00
866 1 0.00
867 17 0.00
868 29 0.01
869 9 0.00
870 11 0.00
871 11 0.00
872 10 0.00
873 10 0.00
874 15 0.00
875 18 0.00
876 217 0.05
877 122 0.03
878 270 0.06
879 1 0.00
880 2 0.00
881 1 0.00
882 29 0.01
884 1 0.00
885 130 0.03
886 196 0.04
887 2 0.00
888 1 0.00
889 2 0.00
890 234 0.05
891 225 0.05
892 10 0.00
893 1 0.00
896 1 0.00
897 26 0.01
898 490 0.11
901 429 0.10
902 332 0.07
903 127 0.03
904 30 0.01
905 451 0.10
906 315 0.07
907 2 0.00
908 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGAGCGGGCGGACGGG
CGGGCACTACGCCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAA
AACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACAGCCCCCCGATCGCCGG
AACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCCTCGGCGAAGAAAAA
TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTTCGGTCCGATCTTA
GACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC
CCCCTCTGCGTGCTACCGATCCTGCTACCGTAACCCTCTGTCTGGTCTG
Found at i:18754579 original size:26 final size:26
Alignment explanation
Indices: 18754542--18754593 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18754532 CGGTCTGATA
18754542 TTAGACTAGGAATGAACT-TCGTATGC
1 TTAGACTAGGAATGAACTCT-GTATGC
*
18754568 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTAGGAATGAACTCTGTATGC
18754594 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.29, C:0.15, G:0.25, T:0.31
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCTGTATGC
Found at i:18756297 original size:26 final size:26
Alignment explanation
Indices: 18756268--18756318 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
18756258 AGTCCGATCA
18756268 TAGACTGAG-AATGAACTCCATATGCT
1 TAGACTG-GCAATGAACTCCATATGCT
*
18756294 TAGACTGGCAATGAACTCCGTATGC
1 TAGACTGGCAATGAACTCCATATGC
18756319 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
25 1 0.04
26 22 0.96
ACGTcount: A:0.31, C:0.22, G:0.22, T:0.25
Consensus pattern (26 bp):
TAGACTGGCAATGAACTCCATATGCT
Found at i:18757198 original size:26 final size:26
Alignment explanation
Indices: 18757160--18757212 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18757150 CTGGTTCGAT
*
18757160 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
18757186 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
18757212 C
1 C
18757213 CTAAGTCGAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:18757601 original size:26 final size:26
Alignment explanation
Indices: 18757572--18757627 Score: 112
Period size: 26 Copynumber: 2.2 Consensus size: 26
18757562 CAGGTCCGAT
18757572 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18757598 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18757624 CTTA
1 CTTA
18757628 AGTCAACCCA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 30 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18759374 original size:26 final size:26
Alignment explanation
Indices: 18759345--18759397 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18759335 CCAGTCCGAT
18759345 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* * *
18759371 CTTAGACTGGGAATGATCTCCTTATG
1 CTTAGACTAGGAATGAACTCCGTATG
18759397 C
1 C
18759398 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:18760275 original size:26 final size:26
Alignment explanation
Indices: 18760239--18760291 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18760229 CTGGTCTGAT
*
18760239 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
18760265 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
18760291 C
1 C
18760292 CTAAGCCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:18761019 original size:741 final size:737
Alignment explanation
Indices: 18759530--18761051 Score: 2296
Period size: 741 Copynumber: 2.1 Consensus size: 737
18759520 TGATCCATTA
* *
18759530 TTAGACTGGGAATGAACGCCGTATGCCTAAGCCAACCGACG-AAACGAGCGGGCGAGTAGCACTA
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAACGAGCGGGCGAGGAGCACTA
** * *
18759594 CGCCGACCAGAGAGACGGGATGCGCGAGCCATGGATCGATAGGGTGGTAGCTGGGTTTAGGCACA
66 CGCCGACCAGAGAGACGGGATGCGAAAGCCATGGATCGAGAGGGTAGTAGCTGGGTTTAGGCACA
** * *
18759659 TCTTCATATTTTTCTGTGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAG
131 TCTTCATATTTTTCAATGCCAATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * *
18759724 CCTTCACGTGAAGTTTAATGGCAATACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTCT
196 CCTTCACGTGAAGTTTAACGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAACTTTCT
* *
18759789 TTGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTACCCCCAAACTTGGTAGACGTGATC
261 TTGCTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTACCCCCAAACTTGATAGACGTGATC
* * * *
18759854 CTTGTATTTTTGTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAATTGTACAAGATTTTGTG
326 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTA
*
18759919 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT
391 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTCTAATGGCTACTGGCAGCAAACCTATAAAAT
* * *
18759984 CTCAAATGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAGGAAGCCAATATAAG
456 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAAGCCAATATAAA
* * *
18760049 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCATAGCACCCCGGCCCCCTCGATCATCGGA
521 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCGGCCCCCTCGATCACCGGA
* * * * * *
18760114 ACCCCAATGCCGACAGTTAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCTCGGTGAAGAAAAAT
586 ACCCCAATGCCGACAGTCAAGTTCTCCGGTGATACTCCGACGATGGTGCCCCGGCGAAGAAAAAT
* * * * * * *
18760179 GCAGCACCAGCACATGCCCAAGCCCAGCATCTGTTGCCGCATCCCTCAGTCTGGTCTGATCTTAG
651 ACAGCACCAACACATGCCCAAGCCCAGCATCTGCTGCCACAACCCTCAGTCTGATCTGATCCTAG
18760244 ACTGGGAATGAACTCCGTATGC
716 ACTGGGAATGAACTCCGTATGC
* * * *
18760266 TTACACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--A-CGAGCGGGCGAG-GAGC
* * *
18760331 ACTACGCCGGCCAGAGAGACGGGATGCGAAAGCCGTGGATCGAGAGGGTAGTAGGTGGGTTTAGG
62 ACTACGCCGACCAGAGAGACGGGATGCGAAAGCCATGGATCGAGAGGGTAGTAGCTGGGTTTAGG
* *
18760396 CATATCTTCATATTTCTT-AATGCCAATGCAATTTTTATGGCTTGTAAATTCGTACAATGGTCCC
127 CACATCTTCATATTT-TTCAATGCCAATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * *
18760460 TTAAGCCTTCACGTGAAGTTTCACGGCAAGATGACTCGTTTTCTATTTTTCACGATTGTGAAAAC
191 TTAAGCCTTCACGTGAAGTTTAACGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAAC
**
18760525 TTT-TTATGCTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGATAGAC
256 TTTCTT-TGCTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTACCCCCAAACTTGATAGAC
18760589 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
320 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
18760654 TTTCTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTCTAATGGCTACTGGCAGCAAACCTG
385 TTTCTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTCTAATGGCTACTGGCAGCAAACCTA
* * **
18760719 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCGGGGTTTGATGAGGGATAGGGGGCCAA
450 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAAGCCAA
* *
18760784 TATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGGACACCCCCCCGG-CCCCTCCGAT
515 TATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCGGCCCCCT-CGAT
* *
18760848 CACCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGGTGATACTCCGACGATGGTGCCCCGGCGAA
579 CACCGGAACCCCAATGCCGACAGTCAAGTTCTCCGGTGATACTCCGACGATGGTGCCCCGGCGAA
* * * **
18760913 GAAAAATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTTGGTCTGATCTG
644 GAAAAATACAGCACCAACACATGCCCAAGCCCAGCATCTGCTGCCACAACCCTCAGTCTGATCTG
18760978 ATCCTAGACTGGGAATGAACTCCGTATGC
709 ATCCTAGACTGGGAATGAACTCCGTATGC
* ** * *
18761007 TTAGATTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAAA
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAA
18761052 GAGTGTGCGG
Statistics
Matches: 704, Mismatches: 74, Indels: 13
0.89 0.09 0.02
Matches are distributed among these distances:
736 39 0.06
737 2 0.00
739 2 0.00
740 17 0.02
741 642 0.91
742 2 0.00
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.27
Consensus pattern (737 bp):
TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAACGAGCGGGCGAGGAGCACTA
CGCCGACCAGAGAGACGGGATGCGAAAGCCATGGATCGAGAGGGTAGTAGCTGGGTTTAGGCACA
TCTTCATATTTTTCAATGCCAATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
CCTTCACGTGAAGTTTAACGGCAAGACGACTCATTTTCTATTTTTCACGATTGTCAAAACTTTCT
TTGCTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTACCCCCAAACTTGATAGACGTGATC
CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTA
ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTCTAATGGCTACTGGCAGCAAACCTATAAAAT
CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAAGCCAATATAAA
GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCGGCCCCCTCGATCACCGGA
ACCCCAATGCCGACAGTCAAGTTCTCCGGTGATACTCCGACGATGGTGCCCCGGCGAAGAAAAAT
ACAGCACCAACACATGCCCAAGCCCAGCATCTGCTGCCACAACCCTCAGTCTGATCTGATCCTAG
ACTGGGAATGAACTCCGTATGC
Found at i:18761031 original size:26 final size:26
Alignment explanation
Indices: 18760982--18761032 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
18760972 GATCTGATCC
*
18760982 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCATATGCT
* *
18761008 TAGATTGGGAATGAACTCTATATGC
1 TAGACTGGGAATGAACTCCATATGC
18761033 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.16, G:0.25, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCATATGCT
Found at i:18762474 original size:877 final size:873
Alignment explanation
Indices: 18760272--18762848 Score: 3411
Period size: 891 Copynumber: 2.9 Consensus size: 873
18760262 ATGCTTACAC
* *
18760272 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGC--G-GGCGGGCGGGCACT
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGTGGCGGGC-GGCACT
* * * * * *
18760334 ACGCCGGCCAGAGAGACGGGATGCGAAAGCCGTGGATCGAGAGGGTAGTAGGTGGGTTTAGGCAT
65 ACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
** * *
18760399 ATCTTCATATTTCTTAATGCCAATGCAATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAA
130 ATCTTCATATTT-TTTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * *
18760464 GCCTTCACGTGAAGTTTCACGGCAAGATGACTCGTTTTCTATTTTTCACGATTGTGAAAACTTTT
194 GCCTTCACATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATT-TCAAAACTTTT
* *
18760529 TATGCTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGATAGACGTGAT
258 TATGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
** * *
18760594 CCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTC
323 CCTTGTATTTTT-TTCGGCATGCACAAAAAAATTCAATTAAAAACTTGAAGTGTACAAGATTTTG
* *
18760658 TAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTCTAATGGCTACTGGCAGCAAACCTGTAAA
387 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
18760723 ATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCGGGGTTTGATGAGGGATAGGGGGCCAATATA
452 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * **
18760788 AAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGGACACCCCCCCGGCCCCTCCGATCACCG
517 AAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCG
* * *
18760853 GAACCCCAATGCCGTCGGTCAAGTTCTCCGGTGATACTCCGACGATGGTGCCCCGGCGAAGAAAA
582 GAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAA
* * * *
18760918 ATACGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTTGGTCTGATCTGATCCT
647 ATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTG-CGCAACCC----TC-G----G-T-C-
* **
18760983 AGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCTATATGCCTAAGTCAACCCACG
699 ---C--GG--T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * * * *
18761048 AAAAGAGTGTGCGGGAGCTCAACCGGCCAGAGGGTTGGGATGCGCAAGCCGGGGGTC-ATCGGGT
750 AAAAGAGCGTGCGGGAGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGTCGAGGATCGAACGGGT
* * * * * * *
18761112 CCCCCGTTGCGTGCTGTCGATCTTGCTATCACAACCTTCGGTCTGGTCCAATCTTAGAC
815 CCCCCGTTACGTGCTATCAATCCTGCTACCACAACCTTCGGTCCGGTCCAATCTTAGAA
* * *
18761171 TGGGAATGAATTCCGTATGCCTAAGCCAACCGATGAAAC---C-AGCGGGT------TGGCACTA
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGTGGCGGGCGGCACTA
* *
18761226 CGCCGACCAGAGAGAGGGGATGCGCAAGCCATCGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
66 CGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* * *
18761291 TCTTCATATTTCTATGTGCCAATGCCATTCTTATCGCTTGTAAATTCATACAATGGTCCCTTAAG
131 TCTTCATATTT-TTTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * **
18761356 CCTTCACATGAAGTTTCATCGCAAGATGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTT
195 CCTTCACATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGA-TTTCAAAACTTTTT
* ** *
18761421 GTGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
259 ATGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
18761486 CTTTTA-TTTTTGCTGGCATGCACAAAAAAATTC-ATCTAAAAACTTGAGGTGTACAAGATTTTG
324 CTTGTATTTTTTTC-GGCATGCACAAAAAAATTCAAT-TAAAAACTTGAAGTGTACAAGATTTTG
*
18761549 TGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
387 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
18761614 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
452 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* *
18761679 ACGGCCAAGCACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCG
517 AAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCG
* * * * *
18761744 GAACCCCAATGCCGTCAGTCAGGTTCTCCAGCGATGCTCCGGCTATGGTGCCCCGACGAAGAAAA
582 GAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAA
* *
18761809 ATGTGGCTCCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTT
647 ATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTG-CGCAACCCTCGGTCCGGTCTGATCTT
* * *
18761874 AGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCATGAAATGAGCGT-CTGGGAGCTCAGCCG
711 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAAGAGCGTGC-GGGAGCTCAGCCG
*
18761938 GCCAGAGGGGTGAGATGCGCAAGTCGAGGATCGAACGGGTCCCCC-TCTACGTGCTATCAATCCT
775 GCCAGAGGGGTGGGATGCGCAAGTCGAGGATCGAACGGGTCCCCCGT-TACGTGCTATCAATCCT
*
18762002 GCTACCACAAGCC-TCGGTCCGGTTCAATCTTAGAA
839 GCTACCACAA-CCTTCGGTCCGGTCCAATCTTAGAA
*
18762037 TGGGAATGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCGGGCGGGCTGGCGGGCGGTCAC
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGG-TGGCGGGCGG-CAC
* * *
18762102 TACGTCGACCAGAGAGA-AGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
64 TACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*
18762166 CGTCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
129 CATCTTCATATTTTT-TGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * * *
18762231 AGCCTTCACATGAAGTTTCTTGGCAAGACGACTAGTTTTCTATTTTTCATGATTTACAAAACCTT
193 AGCCTTCACATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTT-CAAAACTTT
* * *
18762296 TTATGGTTTGGGATTTTTTAAAATTTTTTTGGAAAGAGTATTGGCCCCAAACTTGGTAGATGTGA
257 TTATGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
*
18762361 TCCTTGTATTTTTTTCGGCATGCACAAAAAAAATCAATTAAAAACTTGAAGTGTACAAGATTTTG
322 TCCTTGTATTTTTTTCGGCATGCACAAAAAAATTCAATTAAAAACTTGAAGTGTACAAGATTTTG
* * * *
18762426 TGACCTTTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTGCTACTGGCAACAAACCTGTAAA
387 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
18762491 ATCTCAAATGCTCTTTAATGGGGTGTGAGTTCTCGAGGTTTGATGACGGATAGGGGGCCAATATA
452 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* ** *
18762556 AGGGCCAAGTACCAGCACCCATCATACATCATGTGTGCACAACCCCCCCGGCCCCCCCGATCGTC
517 AAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCCGGCCCCCCCGATCGTC
* * * * * *
18762621 GGAACCCCGATGCCGCCGGTTAGGTTCTCCGGTGATGCTCCGGCGATGGTGCACTGGTGAAGAAA
581 GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGCGAAGAAA
* * ** *
18762686 AATGCGGCACCAGCACATGCTCGAGGTCT-GCATGTGCTGCTGCAACCCTCGGTTAGGTCCGATC
646 AATGCGGCACCAGCACATGCCCGA-GCCTAGCATGTGCTGC-GCAACCCTCGGTCCGGTCTGATC
* *
18762750 TTAGACTGGGAATGAACTCCGTGTGCCTAAGTCAACCCAC-AAAACGAGCGTGCGGGCGCTCAGC
709 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAA-GAGCGTGCGGGAGCTCAGC
* * *
18762814 CAGCCAGAGGGGCGGGATGCGAAAGTC-AGGGATCG
773 CGGCCAGAGGGGTGGGATGCGCAAGTCGA-GGATCG
18762849 TCCCCCTTTG
Statistics
Matches: 1487, Mismatches: 158, Indels: 87
0.86 0.09 0.05
Matches are distributed among these distances:
864 1 0.00
865 85 0.06
866 91 0.06
867 3 0.00
869 3 0.00
870 5 0.00
871 1 0.00
872 1 0.00
874 2 0.00
876 5 0.00
877 430 0.29
878 238 0.16
879 4 0.00
880 1 0.00
881 1 0.00
882 1 0.00
886 1 0.00
887 2 0.00
889 1 0.00
890 4 0.00
891 565 0.38
892 2 0.00
895 2 0.00
896 1 0.00
897 1 0.00
899 36 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (873 bp):
TGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGTGGCGGGCGGCACTA
CGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
TCTTCATATTTTTTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
CTTCACATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTCAAAACTTTTTAT
GGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
TGTATTTTTTTCGGCATGCACAAAAAAATTCAATTAAAAACTTGAAGTGTACAAGATTTTGTGAC
CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGG
CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAAC
CCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGC
GGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCGCAACCCTCGGTCCGGTCTGATCTTAGACT
GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAAGAGCGTGCGGGAGCTCAGCCGGCCAGA
GGGGTGGGATGCGCAAGTCGAGGATCGAACGGGTCCCCCGTTACGTGCTATCAATCCTGCTACCA
CAACCTTCGGTCCGGTCCAATCTTAGAA
Found at i:18763520 original size:26 final size:26
Alignment explanation
Indices: 18763491--18763543 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
18763481 CCGGTCCAAT
18763491 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
**
18763517 CTTATTCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18763543 C
1 C
18763544 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.21, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18764481 original size:185 final size:190
Alignment explanation
Indices: 18764142--18764512 Score: 495
Period size: 185 Copynumber: 2.0 Consensus size: 190
18764132 TGTAAAATCC
* * * *
18764142 CAAATGCTCTTTAAGGGGGGTGTGAGCTGTTGAGGTTTGATGAGGGATAGGGGGCTAATATAAGG
1 CAAATGCTCTTTAAGGGGGGTGTGAGCTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGG
* ** *
18764207 GCCAAGTACCAGCACCAATTGTGCATCATGTGTGCACACTCCCCCTTCAGACCCCCCGATCGTCG
66 GCCAAGTACCAGCACCAATCGCACATCATGTGCGCACAC-CCCCCTT-AGACCCCCCGATCGTCG
18764272 GAACCCCAATGCTACTGGTCAGGTTCTCCGACGATGCTCCAACGATGGTGCCCCGGTCTGGT
129 GAACCCCAATGCTACTGGTCAGGTTCTCCGACGATGCTCCAACGATGGTGCCCCGGTCTGGT
* * * * *
18764334 CAAATTCTCTTTAA-GGGGTTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCAGTATGAGG
1 CAAATGCTCTTTAAGGGGGGTGTGAGCTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGG
* * *
18764398 GCCAAGTACTAGCACCCATCGCACA-CATGTGCGCACA-CCCCC-T-GGCCCCCCGATCGTCGGA
66 GCCAAGTACCAGCACCAATCGCACATCATGTGCGCACACCCCCCTTAGACCCCCCGATCGTCGGA
* *
18764459 ACCCCAATGC--CGTCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGCCCCGG
131 ACCCCAATGCTAC-T-GGTCAGGTTCTCCGACGATGCTCCAACGATGGTGCCCCGG
18764513 CCAAGAAAAA
Statistics
Matches: 159, Mismatches: 18, Indels: 11
0.85 0.10 0.06
Matches are distributed among these distances:
183 1 0.01
184 1 0.01
185 65 0.41
187 1 0.01
188 5 0.03
190 11 0.07
191 62 0.39
192 13 0.08
ACGTcount: A:0.20, C:0.28, G:0.29, T:0.22
Consensus pattern (190 bp):
CAAATGCTCTTTAAGGGGGGTGTGAGCTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCAATCGCACATCATGTGCGCACACCCCCCTTAGACCCCCCGATCGTCGGA
ACCCCAATGCTACTGGTCAGGTTCTCCGACGATGCTCCAACGATGGTGCCCCGGTCTGGT
Found at i:18765517 original size:26 final size:26
Alignment explanation
Indices: 18765478--18765530 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18765468 CAGGTCAAAT
*
18765478 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACACCGTATG
* *
18765504 CTTAGACTGGGAATGAACACTGTATG
1 CTTAGACTGAGAATGAACACCGTATG
18765530 C
1 C
18765531 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACACCGTATG
Found at i:18767280 original size:26 final size:26
Alignment explanation
Indices: 18767251--18767303 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18767241 TCCGGTCGAT
*
18767251 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18767277 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18767303 C
1 C
18767304 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18768181 original size:26 final size:26
Alignment explanation
Indices: 18768152--18768202 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
18768142 GAGTCCGATC
18768152 TTAGACTGGGAATGAACTCCGTATGT
1 TTAGACTGGGAATGAACTCCGTATGT
18768178 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
18768203 CCTAAGTCAA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGT
Found at i:18769288 original size:4 final size:4
Alignment explanation
Indices: 18769271--18769300 Score: 51
Period size: 4 Copynumber: 7.5 Consensus size: 4
18769261 GACGAAACGA
*
18769271 GCGG GCGG GTGG GCGG GCGG GCGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GC
18769301 ACAATGTCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
4 24 1.00
ACGTcount: A:0.00, C:0.23, G:0.73, T:0.03
Consensus pattern (4 bp):
GCGG
Found at i:18770448 original size:901 final size:901
Alignment explanation
Indices: 18764333--18771819 Score: 9160
Period size: 901 Copynumber: 8.4 Consensus size: 901
18764323 CCCGGTCTGG
* * * * *
18764333 TCAAATTCTCTTTAAGGGGTTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCAGTATGAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
18764398 GCCAAGTACTAGCACCCATCGCACA-CATGTGCGCACACCCCCTGG-CCCCCCGATCGTCGGAAC
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* * * * *
18764461 CCCAATGCCGTCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGCCCCGGCCAAGAAAAACGC
131 CCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* * * ** * *
18764526 GGCACTAGCACATGCCCGAGCCCAACATGTGCTGCCACAACCCTCGGTCTTGTCCAATCTTACAC
196 GGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * ** *
18764591 TAGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTTTGTATGCCTAAGCCAACCCACGAAAC
260 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* *
18764656 GAGCGTACGAGCGCTCAGCC-GACCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCC
325 GAGCGTGCGGGCGCTCAGCCAG-CCAGAGGGGCGGGATGCGCAAGCCGGGGATCAG-TCGGGTCC
* * * * *
18764719 CCCTCTGCATGCTGCCAATCTTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGTAATG
388 CCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGG-AATG
* * ** * ** * *
18764784 CACTCTGTATGCCTAAGCCAACCGATAAAATGAGCAT--GCGGGCGGATGGGCGAGCACAACGTC
452 AACTCCGTATGCCTAAGCCAACCGACGAAACGA--ATGGGCGGGCGGGCGGGCGGGCACTACGTC
* * * * * * *
18764847 GGCCAAAGAGACGAGATGCACAAGCCGTGGATCGATAGGATGGTTGGTTGGTTTAGGCACATCTT
515 GACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
18764912 CATATTTCTACATGCCAGTGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
580 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
18764977 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT--C-A------AAACTTTCTGCGG
645 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGG
* * * *
18765033 TTCAGGATTTTTTAAAAATTTTTTGGAAGGAGTTTTGTCCCCAAACTTGGTAGACGTGATCTTTG
710 TTCAGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
18765098 TACTTTTGTTGGCGTGCAC-AAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
775 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
18765162 TTTGAAAATAGTGTCCCCATTTCAGACACTTTAATGGCTCCTGGCAGCAAACCTGTAAAATC
840 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * *
18765224 TCAAATGCTCTTTAAAGGGTTATGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * *
18765289 GCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCCTCCGACCCCCCCGATTGTCGGAA
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGGCCCCCCCGATCGTCGGAA
* * * **
18765354 ACCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATG
130 CCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG
* * * * **
18765419 CAGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCAGGTCAAATCTTAGA
195 CGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* * * *
18765484 CTGAGAATGAACTCCGTATGCTTAGACTGGGAATGAACACTGTATGCCTAAGTCAACCCACAAAA
259 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * ** * *
18765549 CGAGCGTTCAGGCCCTCAG-CAGGCCAGAGGGGCAGGATGTACAAGCCAGGGATC-GATTGGG-C
324 CGAGCGTGCGGGCGCTCAGCCA-GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAG-TCGGGTC
* **
18765611 CCCACTCTGTGTGCTGCCGATCCTGCTATCGCAACCCTCAGTCTGGTCCAATCTTAGACTAGGAA
387 CCC-CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACT-GGAA
* * *
18765676 TGAACTCCGTATGCCAAAGCCAACCGACGAAATG-A--GG-GGACGGGCGGGCGGGCACTACG-C
450 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCGGGCGGGCGGGCACTACGTC
* *
18765736 CAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTAGGCACATCT
515 GA-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
*
18765801 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAGGCCT
579 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * * *
18765866 TCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCATGATTTTTGACACTTTTTGTG
644 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCG
* * ** *** *
18765931 GTTC-GAGAATTTTTAAAATTTTTTCGGGAGGAGTTCTT-GTATCAAACATGGTAGACGTGATCC
709 GTTCAG-GATTTTTTAAAATTTTTTTGAAAGGAGTT-TTGGCCCCAAACTTGGTAGACGTGATCC
* * **
18765994 TTGTATTTTTATTAGCATGCACAAAAAAATTCATTTAAAAACTCGAAGTGTACAAGATTTTGTGA
772 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * *
18766059 CCATTTCAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACTGGCAGCAAACCTGCAAAATC
837 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * *
18766124 TAAAATGCTCTTTAAGGGGGTGTGAGTTC-CTGAGGTTTGATGAGGAATAGAGGGCCAATATAAG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* ** *
18766188 GGCCAAGTATCAGCACCCATCGCACATCATGCACGCACACCCCCCGGCACCCCCGATCGTCGGAA
65 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAA
* *
18766253 CCCCAATGCCGTCGGTCAGGTTCTCCTGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
130 CCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG
*
18766318 CGGCACCAGCA-ATGCTCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-C-G---G----T---
195 CGGCACCAGCACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* *
18766366 CT--G---G---TCCG-AT-CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAA
259 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * *
18766421 CGAGCGTGCGGGTGCTCAGCCGGCCGGATGGGCGGGATGCGTAAGTCGGGGATCAGTCGGGTCCC
324 CGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCC
* * * * * * * *
18766486 CCTCTACGTCCTGTCGATCCTACTGTCGCAACCCTCAGTCTGGTGCTATCTTAGAATGGGAATGA
389 CCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACT-GGAATGA
* * ** * * *
18766551 ACTCTGTATGCCTTAGCCAACCGACGAAACGAGCGGGCGGGTGGGCGGACGGGCACTACGTCGGC
453 ACTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCGGGCGGGCGGGCACTACGTCGAC
*
18766616 CAGAG-GACGGGATGCGCAAGCGGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
518 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * * *
18766680 ATTTTTACATGCCAATGCCATTTTTATGGCTTGTAAATTTATAAAATGGTCCCTTAAGCCTTCAC
583 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
*
18766745 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC
648 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC
* * * *
18766810 AAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAACCTTAGTAGACATGATCCTTGTAT
713 AGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * * *
18766875 TTTTTTTGGCATGCATATAAAAATTAAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
778 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
*
18766940 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAATTC
843 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
*
18766999 TCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
18767064 GCCAAGTACGAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* * * * * * ** *
18767129 CCCATTACCATCGATTAGGTTCTCCGACGATGCTCCGGTGATGGTGCCCCGACAAAGAAAAATGC
131 CCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* * * *
18767194 GACACCAGCACATGCTCGAGCCCAGCATGTGCTACCGCAACCCTCGATCCGGT-CGATCTTAGAT
196 GGCACCAGCACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
* *
18767258 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACACACAAAAC
260 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
*
18767323 GAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCAGTCGGGTCCCC
325 GAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCC
* * * ** * ** *
18767388 CTCTGCGAGCTGCCAATCCTGCTACCGCAACCCTTGGTCCGGTCTGATCTTGGACTGGAAGTGAA
390 CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGAA-TGAA
* * * * *
18767453 CTCCGTATGCTTAAGCCACCCGATGAAACG-A---GAGGGCGGGCGGGCGGGCACTATGTC-AGC
454 CTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCGGGCGGGCGGGCACTACGTCGA-C
** * * *
18767513 CAGAGAGACGGGATTTGCAAGTCGTGGCTCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCAT
518 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
18767578 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
583 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * *
18767643 ATGAAGTTTCATGGCAAGACGACTTGTTTT-TCATTTTTCACTATTTTTGAAACTTTTTACGGTT
648 GTGAAGTTTCATGGCAAGACGACTCGTTTTCT-ATTTTTCACGATTTTTGAAACTTTTTGCGGTT
*
18767707 CGGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
712 CAGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
* * * * *
18767772 TTTTTTTTGGCATGCCCAAAAAAATTCAGCGAAAAACTCGAAGTGTACAAGATTTCGTGATCATT
777 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* * * * *
18767837 CGAAAAAAGTGTCCCCATTTCAGACACATTAAAGGCTATTGGCAGCAAAACTGTAAAATC
842 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
*
18767897 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
18767962 GCCAAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCTCCGGCCCCCCCGATCGCCGGAA
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGGCCCCCCCGATCGTCGGAA
* ** * * * * *
18768027 CCCCAACGTTGCCAGTCAGGTTCTTCGGCGATGCTTCGACGATGGTGCCCCGACGAAGAAAAATT
130 CCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG
* * * * **
18768092 CAGAACCGGCACATGCCCGAGCCCAACATGTGCTATCGCAACCCTCGGT-CGAGTCCGATCTTAG
195 CGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG-GTCCGATCTTAG
*
18768156 ACTGGGAATGAACTCCGTATGTTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
258 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * * * * **
18768221 ATGAACGTGCAGGCGCTCAGTCGGCCA-AGGGCCGGGATGCGCAAGATGGGGATCAGTCGGGTCC
323 ACGAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCC
* * * *
18768285 CCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCC-CCGTTCTGGTCTAATCTTAGATTGGGAAT
388 CCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCTGGTCCAATCTTAGACT-GGAAT
* *
18768349 GAACTTCGTATGCCTAAGCCAATCGACGAAACGAACGGGTGGGCGGGCGGGCGGGCGGGCGGGCA
451 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAA----T----GGGCGGGCGGGCGGGCGGGCA
* * *
18768414 CTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCA-G
508 CTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-AGG
* *
18768478 CACATCTTCATATTTTTTCATGCCAATGCCATTTTTTATGGCTTGTAAATTCATACAATGGTCCC
572 CACATCTTCATATTTCTGCATGCCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * **
18768543 TTAAGCCTTCACATGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTCAAAAC
636 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
* * * * * * * **
18768608 TATTTACGGTTCAGGATTTTTTAAAATTTTTTCGGATGGATTTTTGGCCCTAAACGTTTTTAGAC
701 TTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAAC-TTGGTAGAC
* *
18768673 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCAAAAAACTTGAAGTGTACAAGAT
765 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
18768738 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAAACCTG
830 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
18768803 TAAAATC
895 TAAAATC
* *
18768810 TCAAATGCTCTTTAAGGGGTTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* ** * *
18768875 GCCAAGTACCAGCACCCGTCATACATCATGTGCGCACACCCCCCCGGCGCCCCCGATTGTCGGAA
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAA
* ** * *
18768940 CCCCAATACCGTCGGTCAGGTTCAACGGCGATGCTTCGACGATGGTGCCCCGACGAAGAAAAATA
130 CCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG
*
18769005 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCT---T---G---G-TC-----
195 CGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
*
18769055 C-----A-G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCCCGAAA
259 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * *
18769109 TGAGCGTGCGGGTGCTCAGCC-GACCAGAGGGGCAGGATGCGCACGCCGGCGATCGGTAGGGTCC
324 CGAGCGTGCGGGCGCTCAGCCAG-CCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCC
* * * * * * * *
18769173 CTCTCTACGTGTTGCCAATCCTGCTACCACAACCCTCGGTCTGGTCCAATCTTTGACTGGAAATG
388 CCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGG-AATG
* *
18769238 AACTCCGTACGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTGGGCGGGCGGGCGGGCGGGCAC
452 AACTCCGTATGCCTAAGCCAACCGACGAAACGA--------ATGGGCGGGCGGGCGGGCGGGCAC
* * * * * * * **
18769303 AATGTCGGCCAGAGTGATGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGATTCCGCA
509 TACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
18769368 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
574 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* *
18769433 AGCCTTCACGTGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTT
639 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
** *
18769498 TTGCGGTTTGGGATTTTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
704 TTGCGGTTCAGGATTTTTTAAAATTTTTTTGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
*
18769562 ATCCTTGTGTTTTTGTTGGCATGCACAAAAAAATTC-GACTAAAAACTCGAAGTGTACAAGATTT
768 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG-CTAAAAACTCGAAGTGTACAAGATTT
** ** *
18769626 TACGACCATTTGAAAAAAGTGTCTACATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTA
832 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
18769691 AAATC
897 AAATC
* * *
18769696 TCGAATGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGAATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
*
18769761 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTCGGCCCCCCCGATCGTCGGAAC
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* ** * * * *
18769826 CCTAATGCCACCAGTCCGGTTTTCCGGCGATGCTTCGACGATGGTGCCCCGACGAAGAAAAATGC
131 CCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* *
18769891 GGCACCAGCACATG-CGAGCCCAACATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTATACT
196 GGCACCAGCACATGCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
* * * * * * * *
18769955 GGGAATGAGCTTCGTATGCTAACATTGGGAATGAACTCCGTATGCCTAGGTCAACCCATGAAATG
261 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * *
18770020 AGCGTGCGGGTGCTCAGCCAGCCAGAGGGGTGAGATGCGCAAGTCGGGTATC-GATCGGGTCCAC
326 AGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAG-TCGGGTCCCC
* ** * * *
18770084 TTCTATGTGCTGTCGATCCTGCTGCTGCAACCCTCAGTCCGGTCCAATCTTAGACTAGGAATGAA
390 CTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACT-GGAATGAA
** * * * * *
18770149 CTCTATATGCCTAAGACAACCGACGAAACGAATGGGTGGGCGGGCAGACGGGCATTACGTCGACC
454 CTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCGGGCGGGCGGGCACTACGTCGACC
18770214 AGAGAGACGGGATGCGCAAG-CGATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
519 AGAGAGACGGGATGCGCAAGCCG-TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * *
18770278 ATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGGTCCCTCAAGCCTTCAC
583 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
18770343 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC
648 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC
* *
18770408 AAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTAGTAGACGTGATCCTTGTAT
713 AGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT
* * * * *
18770473 TTTTTTTGGCATGCATATAAAAATTAAGCTAAAAACTCGAAGTGTAAAAGATTTTGTGACCATTT
778 TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
*
18770538 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAATTC
843 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * *
18770597 TCAAAAGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * *
18770662 GCGAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACCCTCCCGA-CTGTCGGAA
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC-GTCGGAA
* * ** * * *
18770726 CCCCATTGCCGTCGGTTAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCTGGCGAAGAAAAATA
130 CCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG
* * *
18770791 CGGCACCAGCACATGCCCAAGCCCAGTATGTGCTGCCGCAA--CAC--T-CGGTCCGATC-----
195 CGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
*
18770846 C--------AA-T-C----G--TAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
259 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * ** * * * *
18770895 CGACCGTGCGGGCGCTCAACC-GACCAG-GTTCGCGTGAT-CTGTAAGTCGGGGATCAGCCGGGT
324 CGAGCGTGCGGGCGCTCAGCCAG-CCAGAG-GGGCGGGATGC-GCAAGCCGGGGATCAGTCGGGT
* * * **
18770957 CCGCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTTAGT-TCGGTCTGATCTTAGACTGGGA
386 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCT-GGTCCAATCTTAGACT-GGA
* * * * *
18771021 ATGAACTCCATATGCCTAAGCAAACCGACG--A--AATGAGCGGACGGACGGGCGGGCACTACGT
449 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCGGGCGGGCGGGCACTACGT
*
18771082 C-AGCCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
514 CGA-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * * **
18771146 TTCATATTTCTACGTGCCAATGCCATTTTAATGGCTTGTAAATTCATACAACAGTCCCTTAAGCC
578 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
18771211 TTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTGC
643 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
* * * ** *
18771276 GGTTTAGGATTTTTTAAAATTTTTTCGGAAA-GTGTTTTGAACCCAAA-TTGGTAGATGTGATCC
708 GGTTCAGGATTTTTTAAAATTTTTT-TGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * *
18771339 TTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAGAAACTCAAAGTGTACAAGATTTTGTGA
772 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * *
18771404 CCATTTGAAAAAAGTTTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAACATC
837 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * **
18771469 TCAAATGCTTTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAAAGATAGGGGGCCAATATAAGG
1 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
18771534 GCCAAGTACCAGCACCCATCGCACATCATGTGTGTACA-----------CCCC---C--CGG---
66 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
* * * *
18771580 --C--TG-C--CGGTCAGGTTCTCCGACGATGATCCGATGATGGTGCCCCGACGAAGAAAAATAC
131 CCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* * *
18771638 GGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCTGCAACCCTCAGTCCAGTCCGATCTTAGAC
196 GGCACCAGCACATGCC-GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * *
18771703 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACAAAAT
260 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * *
18771768 GAGCGTCCGAGCGCTCAGTCAGCCAGAGGGGCGGGATCCGTAAGCCAGGGAT
325 GAGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
18771820 TGACTGCGTC
Statistics
Matches: 5714, Mismatches: 706, Indels: 371
0.84 0.10 0.05
Matches are distributed among these distances:
845 2 0.00
846 82 0.01
848 3 0.00
849 2 0.00
850 1 0.00
851 10 0.00
856 4 0.00
859 1 0.00
861 3 0.00
864 2 0.00
865 1 0.00
866 1 0.00
870 1 0.00
872 467 0.08
873 248 0.04
874 12 0.00
875 524 0.09
876 56 0.01
877 162 0.03
878 2 0.00
879 1 0.00
880 2 0.00
881 1 0.00
882 3 0.00
883 27 0.00
884 2 0.00
885 96 0.02
886 235 0.04
887 197 0.03
888 214 0.04
889 8 0.00
890 177 0.03
891 85 0.01
892 19 0.00
893 13 0.00
894 314 0.05
895 3 0.00
896 2 0.00
897 32 0.01
898 487 0.09
899 387 0.07
900 301 0.05
901 724 0.13
902 8 0.00
903 24 0.00
904 2 0.00
907 4 0.00
908 3 0.00
909 169 0.03
910 4 0.00
911 99 0.02
912 139 0.02
913 344 0.06
914 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (901 bp):
TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAAC
CCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
GGCACCAGCACATGCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT
GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
AGCGTGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCC
TCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGAATGAACT
CCGTATGCCTAAGCCAACCGACGAAACGAATGGGCGGGCGGGCGGGCGGGCACTACGTCGACCAG
AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCAGG
ATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
Found at i:18771725 original size:26 final size:26
Alignment explanation
Indices: 18771696--18771748 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18771686 CCAGTCCGAT
18771696 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
18771722 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18771748 C
1 C
18771749 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18773430 original size:26 final size:26
Alignment explanation
Indices: 18773401--18773479 Score: 142
Period size: 26 Copynumber: 3.0 Consensus size: 26
18773391 CCGGTCGGAT
18773401 CTTAGACTAGG-AATGAACTCCGTATG
1 CTTAGACT-GGCAATGAACTCCGTATG
18773427 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
18773453 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
18773479 C
1 C
18773480 CTAAGTCAAC
Statistics
Matches: 52, Mismatches: 0, Indels: 2
0.96 0.00 0.04
Matches are distributed among these distances:
25 2 0.04
26 50 0.96
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:18774337 original size:933 final size:901
Alignment explanation
Indices: 18772531--18775567 Score: 3621
Period size: 933 Copynumber: 3.4 Consensus size: 901
18772521 ATCCGATCTG
* * * * * *
18772531 AGACTGGGAATGAGCTCTGCATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCCGG
1 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGG
* * * *
18772596 CTAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGACCCCCTCTACGTGCTG-TCGATCCTA
66 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATCCTA
*
18772660 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACC
130 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACC
* ** *
18772725 GACGAAACGAGCA--GGTG-GGTAGGCGGGCACTACGCTGACCAGAAAGACGGGATGCGCAAGCC
195 GACGAAACGAGCAGGGGCGAGGCGGGCGGGCACTACGC-GACCAGAGAGACGGGATGCGCAAGCC
* * * * *
18772787 GTGGATCGATAGTGTGGTAGGTTGGTTTAGGTACATCTTCATATTTCTAT-GTGCCAATGCCATT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TTTCATGCCAATGCCATT
* * * * *
18772851 TTTATGGCTTGTAAATTCATACAGTGCTCCCCTAAGCCTTCGCATGAAGTTTCATGGCAAGATGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGA
* * *
18772916 CTCGTTTTCTATTTTTCACGATTTTTGAAACTCTTTGC-AGTTCTGGATTGTTTAAAATTTTTTC
388 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGA-TTCGGGATT-TTTAAAATTTTTTC
** * *
18772980 GGAAGGAGTTTTGGCCATAAACTTGGTAGATGTGATCCTTGTATTTTTGCTGGCATGCACAAAAA
451 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
18773045 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
516 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
18773110 GACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGACT
581 GACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGT
**
18773175 TCTCGAGGTTTGATGAGGGATAGATGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATC
646 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATC
* **
18773240 ATGTGCGCACACCCCCCAGG-CCCCCCGATCGCCGGAACCCTAATGTCGTCCATCAGGTTCTCCG
711 ATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTCCG
* * *
18773304 GCGATGCTCCTGTGATAGTGCCCCGACGAAGAAAAATGCAGCACCAGCATATGCCCGAGTCCAGC
776 GCGATGCTCCTGCGATAGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGACCAGC
18773369 ATGTGCTGCCGCAACCCTCGGTCCGGTCGGATCTTAGACTAGGAATGAACTCCGTATGCTTAGAC
841 ATGTGCTGCCGCAA----C---CC--TCGG-TC-----C-----A-G---TCCG-AT-CTTAGAC
* *
18773434 TGGCAATGAACTCCGTATGCTT
880 TGGGAATGAACTCTGTATGCTT
* * * * * *
18773456 AGACTGGCAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTACGGGCGCTTACCCGG
1 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGG
* * * *
18773521 CCAGAGGGGCAGGATGCGCATGTCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCTGATCCTAC
66 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTAC
* * ** * *
18773586 TGCCACAACCCTCGGTCCGATCCAATCTTAGACTAGGAATGAACTCCGTACGCCAAAGCCAACCG
131 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
18773651 ATGAAACGAGCAGGCGAGCGAGCGGGCGGGCGGGCACTACGTCGGCTAGAGAGACGGGATGCACA
196 ACGAAACGAGCAGG-G-GCGA---GGCGGGCGGGCACTACG-CGACCAGAGAGACGGGATGCGCA
*
18773716 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTTTTCATGCCAATGCC
255 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCATGCCAATGCC
*
18773781 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGA
320 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
18773846 TGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGATTCGGGATTTTTCAAACTTTTT
385 TGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGATTTTT-AAAATTTTT
* * * * * *
18773911 TCGGAAGGATTTTTGCCCCCAAACTTAGTATACATGATCCTTGTATTTTTGTTGGCATGCATAAA
449 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
18773976 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
514 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
18774041 TAGACACTTTAATGGCCACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGCGTGA
579 CAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGAGTGA
* *
18774106 GTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCGATTGCACA
644 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACA
* * *
18774171 TCATGGGCGCACACCCCCC-GGCCCCCCCGGTCGCCGGAACCCTAATGTAGTCGGTCAGGTTCTC
709 TCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTC
* * * ** *
18774235 CGGTGATGCT-CTGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCTGA-ACC
774 CGGCGATGCTCCTG-CGATAGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGACC
* *
18774298 TAGGATGTGCTGCTGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTT
838 -AGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTT
* * *
18774363 AGACTGGGAATGAACTCCGTATGCCTAAGTCGACCCACGAAACGAGCGTGCGAGCGCTCAATCGG
1 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGG
* * * * * * * **
18774428 GCAGAAGGGCGGGATGCGCAAGCCGGGGATCGACTGCGTCCCCCTCTGCATGCTGCCGATCTTGT
66 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTAC
* * * * * *
18774493 TGTCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGCATACCTAAGCCAACCG
131 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
18774558 ACGAAATGAGC--GGGC-AGGCGGGCGGGCACTACACCGACCAGGGAAACGGGATGCGCAAGCCA
196 ACGAAACGAGCAGGGGCGAGGCGGGCGGGCACTAC-GCGACCAGAGAGACGGGATGCGCAAGCCG
* * * *
18774620 TGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTGCATTCCAATGCCATTTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCATGCCAATGCCATTTT
* *
18774685 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGACGACT
325 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
* * * *
18774750 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGAA
390 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGA-TTTTTAAAATTTTTTCGGA
*
18774815 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAAT
454 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
18774880 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
519 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
18774945 ACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
584 ACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCT
* *
18775010 CGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGACCAAGTACCAGCACCCATCT-CACATCAT
649 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT-TGCACATCAT
* * * * *
18775074 GTGCACACACCCCCCCTTGGCCCCCCCGATCGTCGAAACCCCAATG-C--C-GTC-GG---T-CA
713 GTGCGCACA-CCCCCC-TGGCCCCCCCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTCCG
* * * * ** * *
18775130 G-G-TGCTCCAGCGATGGTGCCCCGACGAAGCAAAATAC-GACACCAGCACATGCTTGAGCCCAA
776 GCGATGCTCCTGCGATAGTGCCCCGACGAAGAAAAATGCAG-CACCAGCACATGCCCGAGACCAG
* * * *
18775192 CATGTGCTGTCGCAACCTTTGGTCC-GATCCGATCTTAGTCTGGGAATG-A--C------C-T
840 CATGTGCTGCCGCAACCCTCGGTCCAG-TCCGATCTTAGACTGGGAATGAACTCTGTATGCTT
** * ** *
18775244 ---C------T--A-----TATGCCTAAGTCAACCCGTGAAACGAGCGTGCGGGCGTTCAGTCGA
1 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGG
* * * * * * * *
18775293 CCACAGGGGCAGGATGCACAAGCCAGGGATCGGCCGGGTCCCCCTCTGTGTGCTGCCGATCCTGC
66 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTAC
* ** * * ** * * *
18775358 TGTCGCAACCCTCAATTCGATCCAATCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCG
131 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCG
** *** * **
18775423 ACGAAACGA--ATAGGCG-GGCGGGCGGGCACTACGTCGGGTAGAGAGACGGGATGCGCGAGTTG
196 ACGAAACGAGCAGGGGCGAGGCGGGCGGGCACTACG-CGACCAGAGAGACGGGATGCGCAAGCCG
* * * *
18775485 TGGATAGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTT
260 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCATGCCAATGCCATTTT
18775550 TATGGCTTGTAAATTCAT
325 TATGGCTTGTAAATTCAT
18775568 GCCTAAGCCC
Statistics
Matches: 1854, Mismatches: 228, Indels: 120
0.84 0.10 0.05
Matches are distributed among these distances:
865 271 0.15
870 1 0.00
872 1 0.00
878 1 0.00
881 1 0.00
882 1 0.00
888 1 0.00
890 3 0.00
891 84 0.05
892 5 0.00
893 2 0.00
894 1 0.00
897 2 0.00
898 3 0.00
899 464 0.25
900 12 0.01
902 25 0.01
903 2 0.00
904 1 0.00
905 1 0.00
907 197 0.11
908 2 0.00
909 4 0.00
912 1 0.00
913 1 0.00
918 1 0.00
923 2 0.00
924 4 0.00
925 178 0.10
926 3 0.00
928 1 0.00
929 3 0.00
932 12 0.01
933 561 0.30
934 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (901 bp):
AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGG
CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTAC
TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAACGAGCAGGGGCGAGGCGGGCGGGCACTACGCGACCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTTCATGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC
GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGATTCGGGATTTTTAAAATTTTTTCGGAAG
GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGAGTGAGTTCTCG
AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTG
CGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTCCGGCGAT
GCTCCTGCGATAGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGACCAGCATGTG
CTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTT
Found at i:18774370 original size:26 final size:26
Alignment explanation
Indices: 18774334--18774386 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18774324 CCAGTCCGAT
*
18774334 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18774360 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
18774386 C
1 C
18774387 CTAAGTCGAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:18775649 original size:26 final size:26
Alignment explanation
Indices: 18775613--18775665 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
18775603 CTGGTCTGAT
18775613 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
18775639 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
18775665 C
1 C
18775666 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:18776988 original size:25 final size:26
Alignment explanation
Indices: 18776940--18776994 Score: 69
Period size: 27 Copynumber: 2.2 Consensus size: 26
18776930 TTTTTCACGA
* *
18776940 TTTTTGAAACTTTTTGTGGCTAGGGAT
1 TTTTTGAAACTTTTTGTCGATA-GGAT
18776967 TTTTTGAAA-TTTTT-TCGATAGGAT
1 TTTTTGAAACTTTTTGTCGATAGGAT
18776991 TTTT
1 TTTT
18776995 GGACCCAAAC
Statistics
Matches: 26, Mismatches: 2, Indels: 3
0.84 0.06 0.10
Matches are distributed among these distances:
24 8 0.31
25 4 0.15
26 5 0.19
27 9 0.35
ACGTcount: A:0.20, C:0.05, G:0.20, T:0.55
Consensus pattern (26 bp):
TTTTTGAAACTTTTTGTCGATAGGAT
Found at i:18777432 original size:26 final size:26
Alignment explanation
Indices: 18777403--18777453 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
18777393 TCCGGTCCGA
18777403 TCTTAGACTGGGAATGAACTCCGTAT
1 TCTTAGACTGGGAATGAACTCCGTAT
18777429 TCTTAGACTGGGAATGAACTCCGTA
1 TCTTAGACTGGGAATGAACTCCGTA
18777454 CGCCTAAGTC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.24, T:0.29
Consensus pattern (26 bp):
TCTTAGACTGGGAATGAACTCCGTAT
Found at i:18778324 original size:26 final size:26
Alignment explanation
Indices: 18778295--18778347 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
18778285 CCAGTCCGAT
18778295 CTTAGACTAGG-AATGAACTCCGTATG
1 CTTAGACT-GGCAATGAACTCCGTATG
18778321 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
18778347 C
1 C
18778348 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 2 0.08
26 24 0.92
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:18780121 original size:26 final size:26
Alignment explanation
Indices: 18780083--18780134 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
18780073 CGGTCCAATG
*
18780083 TTAGACTAGGAATGAACTCCGTATGC
1 TTAGACTACGAATGAACTCCGTATGC
*
18780109 TTAGACTACGAATGAACTCTGTATGC
1 TTAGACTACGAATGAACTCCGTATGC
18780135 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.19, G:0.21, T:0.29
Consensus pattern (26 bp):
TTAGACTACGAATGAACTCCGTATGC
Found at i:18780551 original size:898 final size:899
Alignment explanation
Indices: 18775573--18786677 Score: 12187
Period size: 891 Copynumber: 12.4 Consensus size: 899
18775563 TTCATGCCTA
* * * *
18775573 AGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * *
18775638 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACAAGCGTGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * * *
18775703 CCAGCCAGAGGG-GCAGGATGCGTAAGCCGAGGATCGACCTGGTCCCCCTCTACATGCTGTCGAT
131 CCGGCCAGAGGGCG-A-GATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGAT
* * * * * * *
18775767 CATGCTG-T-CATAACCCTCACTCCAGTCTGATCTTAGACTAGGAATGAACTCTGCATGCCTAAG
194 CCTGCTGCTGC--AACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * ** * *
18775830 CCAATCGATGAAACGAGCGGGTGGGCGGACGGGCCGGCACTACATCGGCCAGAGAGACAGGATGT
257 CCAACCGACGAAACGAGC----GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
*
18775895 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA-ATTCTTCATATTTCTACATGCCAA
318 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA-TCTTCATATTTCTGCATGCCAA
*
18775959 TGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
382 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * *
18776024 AAGACAACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTGCGGTTTGGAATTTTTTAAAAT
447 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAAT
* ** * * *
18776089 TTTTTCGGAAGGAGTTTTGAACCCAAACTTAGTAGATGTGATCCTTGTATTTTTGTTGACATGCA
512 TTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
18776154 CAAAAAGATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
577 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
18776219 ATTTTC-GCCACTTTAATGGCTATTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
642 A-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
18776283 GGTGAGTTCTCGAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
706 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * * * * * *
18776348 GCAAATTATGTACGCACAGCCCCCCTGACCCCCCCGATCGTCAGAACCCTAATACCGTCGGTCAG
771 GCACATCATGTGCGCACA-CCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAG
** * * * * *
18776413 GTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCCGTACCAGCACATGCGCG
835 GTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
** * * *
18776478 AGCCCAGCATGTGCTGTTGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTTCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * *
18776543 GCTTAGACT--G---G------G--TGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGATCAA
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * ** * * *
18776595 CCGACCAGAGGGGCGGGATGCGCAAGCCGGGCATCGGTCGGGTCCCATTCTACGTGTTGTCAATC
131 CCGGCCAGA-GGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATC
* * * * ** * * *
18776660 TTCCTGCCGCAACCCTC-GATCCGGTCCAATCTTAGTCTGGGAATGAACTCTGTACGCCTAAGCC
195 CTGCTGCTGCAACCCTCAG-TTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
18776724 AACCGACGAAACGGGCGGGCGGGCGGGCAGGCACTACGTCGACCAGAGAGACGGGATGCACAAGC
259 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
*
18776789 CGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * *
18776854 TTTATGGCATGTAAATTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTTCAAGGCAAGACGA
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * *
18776919 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGCTAGGGATTTTTTGAAA-TTTTTTC
454 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTG
* *
18776983 GATAGGATTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
519 GA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
18777048 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
583 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
18777113 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
648 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
18777178 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACATC
713 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
18777243 ATGTGCGCACA-CCCCCCAGCCCCCCCGATCACCGGAACCCCAATGCCGTTGGTCAGGTTCTTCG
778 ATGTGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * *** *
18777307 GCGACGCTCCGGTGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAGCACATGCCCG
843 ACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* *
18777364 AGCCCAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * *
18777429 TCTTAGACTGGGAATGAACTCCGTACGCCTAAGTCAACCCACGAAACGAGCGTGCGAGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * ** * ** *
18777494 -CGGCCAGAGGGGGGGAT--G-AAG-CGGGGATCGG-TTGGTCCCGCTCTGTGTGCTGCAGAT-C
131 CCGGCCAGAGGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCC
* * *
18777552 TGTTGC-GCAACCCTCAG-TCGGTCTGATC-TAGACT-GGAA-GAACTCTGTATGCCCTAAGCTA
196 TGCTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG-CCTAAGCCA
* *
18777612 A-CG-CGAAACGGGCGGGCGGGCAGGCGGACGGGTGGGCA-TACG-CGCCCAGAG-GA-GGGATG
260 ACCGACGAAACGAGCGGGCGGGC--G-GG-C----GGGCACTACGCCGGCCAGAGAGACGGGAT-
18777671 GCGCAAGCCGTGGATCGATAGGGTGGGTAGGTGGG-TTAGGCACATCTTCATATTTCTGCATGCC
316 GCGCAAGCCGTGGATCGATAGGGT-GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* ** * * *
18777735 AATGCCCTTTTTTATTTCTTGTAAATTCATACAATGGTCCTTTAAGCTTTCACGTCAAGTTTCAT
380 AATG-CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
** *
18777800 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC-TTTTGCGGTTCGAGATTTTTT-A
444 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAA
* * **
18777863 AA-TTTTTTGAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTTTCC
509 AATTTTTTTG-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTTGTTGG
* * *
18777927 CTTGCATAAAAAAATTCAGCTAAAAACTCGAAGTGGACAAGATTTTGTGACCATTTGAAAAAAGT
571 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
18777992 GTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTATAAAATCTGAAATGCTCTTTAA
636 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
18778057 GAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATACGGGGCCAATATATGGGCCAAGTACCAGCAC
701 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * ** * * ** *
18778122 CCATCGTACATCATGTGTGCACA-CCCCCCGGCCCCCCCGATCATCAGAAACCCAATGCCACCAG
766 CCATCGCACATCATGTGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGG
** * * * * *
18778186 TCAGGTTCTCCGGTGATGCTCCGACGATGGTACCCCGGTGAAGAAAAATGCGACACCAGCACATT
831 TCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATG
*
18778251 CTCG
896 CCCG
* * * ** * *
18778255 AGCCCAGTATGTGTTGCCCCAACCCTCCATCCAGTCCGATCTTAGACTAGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
18778320 GCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGGGCGGGTGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * *
18778385 CCAGCCAGAGGGGCAAGATGCACAAGCC---GA---------TCCCCCTTTACATGCTGCCGATC
131 CCGGCCAGA-GGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATC
* * **
18778438 CTGCTG-TCGCAACCCT-TGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCTATATGCCTAAG
195 CTGCTGCT-GCAACCCTCAGTTC-GGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
18778500 CCAACCGACGAAACAAGCGGGCGGGCGGGCGGGCAGGCGGGCACTACGCCGACCAGAGAGACGGG
257 CCAACCGACG--A-AA-CGAGCGGGCGGGC--G--GGCGGGCACTACGCCGGCCAGAGAGACGGG
**
18778565 ATGCGCAAGCAATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
314 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* * * *
18778630 TAATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTCAGCCTTTACGTGAAGTTTCAT
379 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * *
18778695 GGCAAGACAACTTGTTTTCTATTTTTCATGACTTTTGAAACCTTTTGCGG-TCTGGGATTTTTTA
444 GGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC-GGGATTTTTTA
* * * * *
18778759 ATATTTTTTCGGAAGGTGTTTTGGCCCTAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
508 AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
* *
18778824 TGCACAAAAAAATTCAGCTAAAAACCCGAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTGT
573 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* *
18778889 CCCCATTTAAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGG
638 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
18778954 GGGTGTGAGTTATCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
703 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * *
18779019 ATTGCACATCATGTGCGCACACCCCCTCGACCGCTCCGATCGCCGGAACCCCAATGTCGTCGGTC
768 ATCGCACATCATGTGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTC
* * * * * *
18779084 AGGTTCTCTGGCGATGCTCCGGTGATGGTGCCCCGATGGAGAAAAATGCAGCACCAGCAAATGCC
833 AGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCC
18779149 CG
898 CG
** * * * * *
18779151 AGGTCGGCATGTGCTGCCGTAACCCTCGTTCTGGTCTGATCTTAGA-TGGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGGAATGAACTCCGTA
* * * * * *
18779215 TGCTTAGGCTGGGAATGAACTTCGTATCCCTAAGTCAACCCATGAAACAAGCGTCCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * ** * * *
18779280 GCCGGCCAGATGGGCG-GCATGCGCAAGTCGGGGATCAGTTGGGTCCCCCTTTATGTGCTGTCGA
130 GCCGGCCAGA-GGGCGAG-ATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGA
* *
18779344 TCCTGTTGCTGCAACCCTCAG-TCTGGT-TCGATCTGAGACTGGGAATGAACTCCGTATGCCTAA
193 TCCTGCTGCTGCAACCCTCAGTTC-GGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * *
18779407 GCCAAACGACGAAA-TA-------AGCAGACAGGCACTACGCCGGCCAAAGAGACGGGATGCGCA
256 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * **
18779464 AGCCGTGGATCGATAGGGTGGTAGATGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGCC
321 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
18779529 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGA
386 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
18779594 CAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTT
451 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
* * * * ** *
18779659 TTGGAATGAGTTTTGGACCCAAACCTAGTAGACAAGATCCTTGTATTTTTTTTGGCATGCACAAA
516 TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
18779724 AAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
581 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
18779789 CAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTTAAGTGTTTTTTAAGGGGGTGTGA
646 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
18779854 GTTCTCGAGATTTAATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
711 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
18779918 TCATGTGCTCACACCCCCCCGGCCCCTCCGATCACCGGAACCACAATGCCGTCGGTTAGGTTCTC
776 TCATGTGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * *
18779983 CGATGATGCTCTGGCGATGGTGCCCTGATGAAGAAATATGCGGCACCAGCACATGCCTG
841 CGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * *
18780042 AGCCCAGCATGTGCTGCCACAACCCTCGGACCGGTCCAATGTTAGACTAGGAATGAACTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
** * * * * *
18780107 GCTTAGACTACGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGAGCGCGGGCACTCTG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * ** *
18780172 CCGACCAGAGGGACGAGATGCGTAAGACGGGGATCGGCCCGGTCCCCCTCTGTGTGCTCCCGATC
131 CCGGCCAGAGGG-CGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATC
* * * * *
18780237 CTGCTACTACAACTCTCAGTTCGGTCAGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCA
195 CTGCTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
18780302 ACCGACGAATCGAGCGGACGGGCGGGCGGGAACTACGTCGGCCAGAGAGAC-GGATGTGCAAGCC
260 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
**
18780366 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA-ATTCTTCATATTTCTGTGTGCCAATGCCATT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA-TCTTCATATTTCTGCATGCCAATGCCATT
18780430 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * *
18780495 CTCGTTTTCTATTGTTCACGATTTTTTAAACTTTTTGTGGTTTGGGATTTTTTAAAATTTTTTCG
454 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTG
** * * *
18780560 GAAGGAGTTTTGAACCCAAACTTGGTAGATGTGATCTTTGTATTTTTGTTGACATGCACAAAAAA
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* **
18780625 ATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTTG
584 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * * * *
18780690 CCACTTTAATTGCTATTGGCAACAAACCTATAACATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
649 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
18780755 CTCAAGGTTTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
714 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
*
18780820 TGTGCGCACACCCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATACCGTCGGTCAGGTTCTCCG
779 TGTGCGCACA-CCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
** * *
18780885 ACGATGCTCCAACGATGGTGCCCCGACGGAGAAAAATGCGGCACCAGCACATGCCCG
843 ACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* ** * * * * *
18780942 AGGCTGGCATGTGCTACCGCAACCTTTGTTTCGGTCCGATCTTAGA-TGGGGAATGAACTCCGTA
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGGAATGAACTCCGTA
** * * * * *
18781006 TGCTTAGGTTGGGAATGAACTCTGTATCCCTAAGTCAACCCATGAAACAAGCGTCCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * *
18781071 GCCGGCCAGATGGGTGGGATGCGCAAGTCAGAGATCGGCCGGGTCCCCCTCTGCATGCTGCCAAT
130 GCCGGCCAGA-GGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGAT
* * *
18781136 -CT--TGTTG----CCGCA--AC---C----C-T---C---G---G---TCCGTATGCCTAAGCC
194 CCTGCTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * * * * *
18781172 AAATGATGAAA-TA-------AGCGAGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGC
259 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
18781229 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCTAATGCCA-T
324 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* *
18781293 TTTA----TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGATGA
389 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
18781354 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGTGATTTTTTAAAA-TCTTTTG
454 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTG
* * *
18781418 GAAGGAGCTCTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAA
519 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
18781483 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTAAG
584 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
18781548 ACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
649 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
18781613 CTCGATGTTTGATGAGGGATA-GGGGCCAATATAAGGGCTAAGTACCAGAACCCATCGCACATCA
714 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * **
18781677 TGTGTGCACACCCCTCCGGGCCAC-CCGATCTCTGGAACCCCAATGCCACCGGTCAGGTTCTCCG
779 TGTGCGCACACCCC-CCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
** * * * *
18781741 GTGATGCTCCGGTGATGGTGCCCTGGTGAAGAAAAATGCGGCACCAGCACATGCCTG
843 ACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* *
18781798 AGCCCAACATGTGCTGCCACAA-CC-C--T-C-G---G-TC-----C---G---G---TCCG-AT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
*
18781838 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * *
18781902 TCGGCCAGAAGGGCGAGATGCACAAGCCGGGGATCGGCTGGGTCCCCCTCTACGTGCTGGCGATC
131 CCGGCCAG-AGGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATC
** * * * * *
18781967 CTGCTGCCACAACCCTCAGTCCAGTCTAACCTTAGACTGGGAATGAACTCCGTATGCCTCAGCCA
195 CTGCTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
18782032 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGACGAGAGAGACGGGATGCGCAAGCC
260 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * **
18782097 GTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCTTATTTCTGTGTGCC-ATGCCATTT
325 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
18782161 TTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGAC
390 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * ** * * *
18782226 TCGTTTTGTATATTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG
455 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG
* * *
18782291 AAGGCGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCA-TAAAAAA
520 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * **
18782355 TTCAGCTAAAAACTCAAAGTGTTCAAGATTTTGCGACCATTTGAATTAAGTGTCCCCATTTCAGA
585 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
18782420 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAGTGCTCTTTAAGGGGGTGTGAGTTC
650 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * * *
18782485 TTGAGGTTTGATAAGGGATACGGGGCCAATATGAA-GGCCAAGTGCCAGCACCCATCGCTCATCA
715 TCGAGGTTTGATGAGGGATAGGGGGCCAATAT-AAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * *
18782549 TGTGCGCGCACCCCCCCGACCCCT-CGATCACCAGATCCCTAATGCCGCCGGTCAGGTTCTCCGA
779 TGTGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * * *
18782613 CGATGCTCTGGCGATGGTGCCTCGACGAAGAAAAATGTGGCACCAG----T--CCG
844 CGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* ** * ***
18782663 ATCTTAG-A----CTG--GGAACGAAC--TCC-G---GATGCTTAGA-T-----TG------G--
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT-CTTAGACTGGGAATGAACTCCGTA
**
18782701 -G---A-A-T--G-A---ACTCCGTATGCCTAAGTCAACCCACGAAATAAGCGTGCGGGCGCTCA
65 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * * *
18782754 GTCGACCAAAAGGGCGGGATACGCAAGCCGGGGATCGACCGGGTCCCCCTTTACATGCTGTCGAT
130 GCCGGCC-AGAGGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGAT
* * * * * * *
18782819 CCTACTGGC-GTAACCCT-TGGTCTGGTCTGATCTTAGACTGGGAATGAATTTCGTATGCTTAAG
194 CCTGCT-GCTGCAACCCTCAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * ** * * *
18782882 CCAATCGATGAAATGA--------GCAAGCGGGCACTACGCCAGCCAAAGAGATGGGATGCGCAA
257 CCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
18782939 GTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
322 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
18783004 TTCTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGAC
387 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
** *** *
18783069 GACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTATAGTTCGGGATTTTTTAAAATTTCTT
452 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * *
18783134 TGAAAGGAGTTTTAGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
517 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
18783199 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
582 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
18783264 AGGCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAATGCTCTTTAAAGGGGTGTGA
647 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC-AAATGCTCTTTAAGGGGGTGTGA
* * * * *
18783329 GTTGTCAAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACTAGCACCCATCACACA
711 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * ** *
18783394 TCATGTGCGCACATCCCCCCTGGCCCC-CCGATCGTCGGAACCCCATTGCCGCCCATCAAGTTCT
776 TCATGTGCGCACA-CCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * *
18783458 CTGGCGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACTTGCCCG
840 CCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * *
18783518 AGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCCATCTTTGACTGGGAATGTACTCCATAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* ** * *
18783583 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTAG-GAAGGCACTAA
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG-CGTGCGGGCGCTCA
* * * ** *
18783647 GCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATTGATCGGGTCCCCC-CATGCGTGCTGCCGA
130 GCCGGCCAGA-GGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTC-TACGTGCTGCCGA
* * * * * * *
18783711 TCCTGCTACCGAAACCCTC-GGTCTGTTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTCAG
193 TCCTGCTGCTGCAACCCTCAGTTCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
*
18783775 CCAACCGACGAAACGAGCGGGCGGACGTGTGGGCCGACAGGCGGGCACTACGTCGGCCAGAGAGA
257 CCAACCGACGAAACGAGC--G-GG-C----GGG-CG---GGCGGGCACTACGCCGGCCAGAGAGA
18783840 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
310 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * *
18783905 GTACCAATGCCATTTTTTATGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCAAGTGAAGT
375 ATGCCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* *
18783970 TTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTTCGGGATTT
439 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTT
* * *
18784035 TTTAAAATTTTTTTGGAAGGATTTTTGGCCACAAACTTGGTAGATGTGATCCTTGTATTTTTGTT
504 TTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
18784100 GGCATGCACAAAAAACTCGACATAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
569 GGCATG-----------C-ACA-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
*
18784165 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAGAATC
621 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
** *
18784230 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATACAGGGACAATATAAGG
686 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
18784295 GCCAAGCACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCTTATATTGTCCCTGT
751 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC-------CT-CC-G-
*** * ** * * * ** *
18784359 ATC-CCTGGCCAA-TATAATGGCCAAGT-AGT-AGCATCAATCGCACATCAGGTGCGCACACCCC
806 ATCGCC-GG--AACCCCAAT-GCC--GTCGGTCAGGTTC--TC-C-GA-C-GATGCTC-C-GGCG
** ** * * * *
18784420 CCGGCCCCCCCGATCGTCAA-AACCCTAATGTCGTCGGTAAGGTTCTCCAGTGATACT-CCAACG
857 ATGG-TGCCCCGAT-G--AAGAA----AA-AT-G-C-----GG--CACCAG-CACA-TGCC--CG
* * * * * * * * *
18784483 ATGGTGCCCCG-GTGAAGAAAAATGCAGC-ACCAGCTCATGCCCGAG-CCTAGCATGT-G-CTGC
1 A----GCCCAGCATG-TG----CTGCCGCAACC--CTC-GGTCCG-GTCCGATC-T-TAGACTG-
* ** *
18784543 CGCAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTAAGCTTAGACTGGGAATGA
50 -GGAA---T-GAAC---TCCG-T-AT-G-C--------------------TTAGACTGGGAATGA
* * * * *
18784608 AGTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAACTGGACAGAGGG-GCAG
83 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGCG-A-
* * ** *
18784672 GATGCGCAAGCCGGGGATTGACCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCT
146 GATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTGCTGCAACCCT
* * *
18784737 -TGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTACGCCTAAGCCAACCGACGAAACGA--
211 CAGTTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
* * * *
18784799 --ACTGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGT
275 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
*
18784862 GGTAGGTGGGTTTAGGCACATCTTCATATTTCAGCATGCCAATGCCATTTTTATGGCTTGTAAAT
340 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
18784927 TGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
405 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * *
18784992 CACAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCT-GAAGTG-GTTTTGGC
470 CACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-TGGAAG-GAGTTTTGGC
*
18785055 CCCAAACTT-GTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
533 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * * * *
18785119 TCAAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTTAGATACTTTAATGGCT
598 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* *
18785184 ACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTGAGTTCTCGAGGTTTGATG
663 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
18785249 AGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTGTGCA-AACCC
728 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
** * * * * * *
18785313 CCCGGCCCCTTTGATCGTCGAAACCCCAATACCGTCGG-CTTGGTTCTCCGACGATGCTACGACG
793 CCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTC-AGGTTCTCCGACGATGCTCCGGCG
* * *
18785377 ATGGTGCCCCGACGAAG-AAAATACGACACCAGCACATGCCCG
857 ATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * * ** * *
18785419 AGCCCAGCACGTGCTGCCACAACCTTTGGTCCAGTCTAATCTTAGACTGGGAAAGAACTCTGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
* * *
18785484 GCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCAGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
*** * *
18785549 CCGGCCAGAGGG-GCAGGATGCGCTAA-CCGGGGATCAATCGGGTCCCCCTCTACGTGTTGCTGA
131 CCGGCCAGAGGGCG-A-GATGCGC-AAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGA
* * * * * *
18785612 TCCTGCTACCGCAACACTCAATCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGC
193 TCCTGCTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * *
18785677 CAACCGATGAAACGAGCGGGCAGGCAGGCGGGCACTACACCGGCCAAAGAGACGGGCTGCGCAAG
258 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
18785742 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
323 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* * *
18785807 TTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGCCG
388 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * ** *
18785872 ACTCGTTTTCTATTTCTCACGATTTTTGAAACTTTTTACAGTTCAAGATTTTTTAAAATTTTTTC
453 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTT
* * *
18785937 GGAAGGAGTTTTGGCGCCAAACTTGGTAGACGGGATCCTTGTATTTTTGTTGGCATGCACAAAAC
518 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
18786002 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-
583 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
18786066 GAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGCGAG
648 G-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
18786131 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCCAGCACCCATCGCACAT
712 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
18786196 CATGTGCGCACACCCGCCCGGCCCCCCCGATCGTCGGAACCCTAATGCCGTCGGTCAGGATCTCC
777 CATGTGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * *
18786261 GACGCTGCTCCGGTGATGGTGCCCCGATGAAGAAAAAAGTGGCACCAGCACATGCCCG
842 GACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * *
18786319 AGCCCAGCATGTGCTGGCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATCAATTCCGTAT
1 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
*
18786384 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
66 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * ** * * * *
18786449 TCGGCCAGAAGGGCGGGATGCACAAGCTGGGGATCAACCAGGTCCTCCTC--CGTATGTTGCTGA
131 CCGGCCAG-AGGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACG--TGCTGCCGA
* *
18786512 TCCTGCTGCTGCAACACTC-GATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
193 TCCTGCTGCTGCAACCCTCAG-TTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
18786576 CCAACCGACGAAACGAGCGGGCGGACGGGCGGGCACTACGCCGGCCAAAGAGACGGGCTGCGCAA
257 CCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
18786641 GCCATGGATCGATAGGGCGGTAGGTGGGTTTAGGCAC
322 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
18786678 TATAGATACT
Statistics
Matches: 8639, Mismatches: 1164, Indels: 799
0.81 0.11 0.08
Matches are distributed among these distances:
830 106 0.01
831 5 0.00
832 4 0.00
833 2 0.00
835 1 0.00
837 4 0.00
838 1 0.00
839 1 0.00
842 1 0.00
845 86 0.01
846 178 0.02
847 107 0.01
848 85 0.01
849 81 0.01
850 2 0.00
851 1 0.00
852 3 0.00
853 156 0.02
854 3 0.00
855 8 0.00
856 105 0.01
857 58 0.01
858 200 0.02
859 129 0.01
860 10 0.00
861 4 0.00
862 6 0.00
863 32 0.00
864 71 0.01
865 8 0.00
866 6 0.00
867 98 0.01
868 4 0.00
870 1 0.00
871 351 0.04
872 107 0.01
873 4 0.00
874 1 0.00
877 1 0.00
880 1 0.00
882 1 0.00
883 1 0.00
884 1 0.00
885 19 0.00
886 186 0.02
887 32 0.00
888 481 0.06
889 69 0.01
890 95 0.01
891 901 0.10
892 595 0.07
893 359 0.04
894 16 0.00
895 316 0.04
896 295 0.03
897 320 0.04
898 626 0.07
899 187 0.02
900 582 0.07
901 7 0.00
902 1 0.00
903 1 0.00
905 71 0.01
906 1 0.00
908 82 0.01
909 3 0.00
910 1 0.00
913 96 0.01
914 172 0.02
915 1 0.00
916 1 0.00
917 3 0.00
920 2 0.00
924 14 0.00
925 4 0.00
926 103 0.01
927 108 0.01
928 4 0.00
929 3 0.00
932 6 0.00
933 3 0.00
934 2 0.00
935 5 0.00
936 5 0.00
937 9 0.00
938 5 0.00
939 8 0.00
941 1 0.00
942 1 0.00
943 5 0.00
944 1 0.00
945 3 0.00
946 7 0.00
947 1 0.00
948 3 0.00
949 4 0.00
952 2 0.00
953 4 0.00
954 1 0.00
955 2 0.00
956 6 0.00
957 3 0.00
958 1 0.00
959 4 0.00
960 3 0.00
961 1 0.00
962 6 0.00
963 7 0.00
964 2 0.00
965 10 0.00
966 3 0.00
967 4 0.00
968 4 0.00
969 6 0.00
970 1 0.00
972 3 0.00
973 4 0.00
974 3 0.00
975 11 0.00
976 4 0.00
977 209 0.02
978 3 0.00
979 1 0.00
980 1 0.00
981 2 0.00
984 3 0.00
985 1 0.00
986 1 0.00
987 1 0.00
988 1 0.00
990 32 0.00
991 141 0.02
992 101 0.01
995 2 0.00
996 2 0.00
1000 1 0.00
1006 1 0.00
1007 4 0.00
1008 172 0.02
1009 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
CCGGCCAGAGGGCGAGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACGTGCTGCCGATCC
TGCTGCTGCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
ATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCG
Found at i:18781011 original size:26 final size:26
Alignment explanation
Indices: 18780982--18781032 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
18780972 TCGGTCCGAT
18780982 CTTAGATGGGGAATGAACTCCGTATG
1 CTTAGATGGGGAATGAACTCCGTATG
* * *
18781008 CTTAGGTTGGGAATGAACTCTGTAT
1 CTTAGATGGGGAATGAACTCCGTAT
18781033 CCCTAAGTCA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.14, G:0.29, T:0.31
Consensus pattern (26 bp):
CTTAGATGGGGAATGAACTCCGTATG
Found at i:18782694 original size:26 final size:26
Alignment explanation
Indices: 18782665--18782717 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18782655 CCAGTCCGAT
18782665 CTTAGACTGGGAACGAACTCCGGATG
1 CTTAGACTGGGAACGAACTCCGGATG
* * *
18782691 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGGATG
18782717 C
1 C
18782718 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.21, G:0.28, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGGATG
Found at i:18784595 original size:26 final size:26
Alignment explanation
Indices: 18784566--18784615 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
18784556 CTGGTCCGAT
18784566 CTTAGACTAGGAATGAACTCCGTAAG
1 CTTAGACTAGGAATGAACTCCGTAAG
* *
18784592 CTTAGACTGGGAATGAAGTCCGTA
1 CTTAGACTAGGAATGAACTCCGTA
18784616 TGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.18, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTAAG
Found at i:18785497 original size:26 final size:26
Alignment explanation
Indices: 18785459--18785511 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18785449 CCAGTCTAAT
* *
18785459 CTTAGACTGGGAAAGAACTCTGTATG
1 CTTAGACTAGGAAAGAACTCCGTATG
*
18785485 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAAAGAACTCCGTATG
18785511 C
1 C
18785512 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAAAGAACTCCGTATG
Found at i:18786388 original size:26 final size:26
Alignment explanation
Indices: 18786359--18786411 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
18786349 CCGGTCTGAT
*
18786359 CTTAGACTAGGAATCAATTCCGTATG
1 CTTAGACTAGGAATCAACTCCGTATG
* *
18786385 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATCAACTCCGTATG
18786411 C
1 C
18786412 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATCAACTCCGTATG
Found at i:18786611 original size:900 final size:897
Alignment explanation
Indices: 18784365--18786677 Score: 3399
Period size: 900 Copynumber: 2.6 Consensus size: 897
18784355 CTGTATCCCT
* ** * * *
18784365 GGCCAATATAATGGCCAAGTAGTAGCATCAATCGCACATCAGGTGCGCACACCCCCCGGCCCCCC
1 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* * * * * *
18784430 CGATCGTCAAAACCCTAATGTCGTCGGTAAGGTTCTCC-AGTGATACTCCAACGATGGTGCCCCG
66 CGATCGTCGAAACCCTAATGCCGTCGGTCAGGTTCTCCGA-CGATGCTCCGACGATGGTGCCCCG
* * * * * *
18784494 GTGAAGAAAAATGCAGCACCAGCTCATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTG
130 ATGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* * *
18784559 GTCCGATCTTAGACTAGGAATGAACTCCGTAAGCTTAGACTGGGAATGAAGTCCGTATGCCTAAG
195 GTCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
18784624 TCAACCCACGAAACGAGCGTACGGGCGCTCA-ACTGGACAGAGGGGCAGGATGCGCAAGCCGGGG
260 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGAC-GGCCAGAGGGGCAGGATGCGCAAGCCGGGG
** * * * * * * * *
18784688 ATTGACCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCT
324 ATCAACCGGGTCCCCCTCCGTATGTTGCTGATCCTGCTGCCGCAACACTCGATCCGGTCTGATCT
* * *
18784753 TAGACTGGGAATGAACTCCGTACGCCTAAGCCAACCGACGAAACGAAC---TGGCGGGCGGGCAC
389 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGCGGGCGGGCAC
* * * *
18784815 TACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
454 TACGCCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
18784880 CATCTTCATATTTCAGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTA
519 CATCTTCATATTTCAGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTA
* *
18784945 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTT
584 AGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTCTCACAATTTTTGAAACTTT
* * * * *
18785010 TTACGGTTCAGGATTTTTTAAAATTTTTTCTGAAGTGGTTTTGGCCCCAAACTTGTAGATGTGAT
649 TTACAGTTCAAGATTTTTTAAAATTTTTTCGGAAGTGGTTTTGGCCCCAAACTTGTAGACGGGAT
*
18785075 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTGCAAGATTTTGT
714 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGT
* * *
18785140 GACCATTTGAAAAAAGTGCCCCCATTTTAGATACTTTAATGGCTACTGGTAGCAAACCTGTAAAA
779 GACCATTTGAAAAAAGTGCCCCCATTTGAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
18785205 TCTCAAATGCTCTTTAAGGTGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
844 TCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * **
18785259 GGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTGTGCAAACCCCCCGGCCCCTT
1 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* * * * *
18785324 TGATCGTCGAAACCCCAATACCGTCGG-CTTGGTTCTCCGACGATGCTACGACGATGGTGCCCCG
66 CGATCGTCGAAACCCTAATGCCGTCGGTC-AGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
* * * * * * * *
18785388 ACGAAGAAAATA-CGACACCAGCACATGCCCGAGCCCAGCACGTGCTGCCACAACCTTTGGTCCA
130 ATGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* * * * *
18785452 GTCTAATCTTAGACTGGGAAAGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAG
195 GTCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
18785517 TCAACCCACGAAACGAGTGTGCAGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCTAA-CCGGGG
260 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGACGGCCAGAGGGGCAGGATGCGC-AAGCCGGGG
* * *
18785581 ATCAATCGGGTCCCCCT-C-TACGTGTTGCTGATCCTGCTACCGCAACACTCAATCCGGTCTGAT
324 ATCAACCGGGTCCCCCTCCGTA--TGTTGCTGATCCTGCTGCCGCAACACTCGATCCGGTCTGAT
* * *
18785644 CTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCAGGCAGGCGGG
387 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GGCGGGCGGG
*
18785709 CACTACACCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
451 CACTACGCCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
*
18785774 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCC
516 GCACATCTTCATATTTCAGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCC
* *
18785839 TTAAGCCTTCACGTGAAGTTTCATGCCAAGCCGACTCGTTTTCTATTTCTCACGATTTTTGAAAC
581 TTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTCTCACAATTTTTGAAAC
*
18785904 TTTTTACAGTTCAAGATTTTTTAAAATTTTTTCGGAAG-GAGTTTTGGCGCCAAACTTGGTAGAC
646 TTTTTACAGTTCAAGATTTTTTAAAATTTTTTCGGAAGTG-GTTTTGGCCCCAAACTT-GTAGAC
* *
18785968 GGGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGAT
709 GGGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGAT
*
18786033 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGA-ACACTTTAATGGCTACTGGCAGCAAACCT
774 TTTGTGACCATTTGAAAAAAGTGCCCCCATTT-GAGACACTTTAATGGCTACTGGCAGCAAACCT
*
18786097 GTAAAATCTCAAATGCTTTTTAAGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGGG
838 GTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGGG
*
18786157 GGCCAATATAAGGGCCAAGTTCCAGCACCCATCGCACATCATGTGCGCACACCCGCCCGGCCCCC
1 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCC
* * * **
18786222 CCGATCGTCGGAACCCTAATGCCGTCGGTCAGGATCTCCGACGCTGCTCCGGTGATGGTGCCCCG
65 CCGATCGTCGAAACCCTAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCG
* *
18786287 ATGAAGAAAAAAGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGGCGCAACCCTCGGTCCG
130 ATGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
* *
18786352 GTCTGATCTTAGACTAGGAATCAATTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
195 GTCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * *
18786417 TCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAAGGGCGGGATGCACAAGCTGGGGA
260 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGACGGCCAGAGGGGCAGGATGCGCAAGCCGGGGA
* * *
18786482 TCAACCAGGTCCTCCTCCGTATGTTGCTGATCCTGCTGCTGCAACACTCGATCCGGTCTGATCTT
325 TCAACCGGGTCCCCCTCCGTATGTTGCTGATCCTGCTGCCGCAACACTCGATCCGGTCTGATCTT
18786547 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGGGCAC
390 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG-CGGGCGGGCAC
* *
18786612 TACGCCGGCCAAAGAGACGGGCTGCGCAAGCCATGGATCGATAGGGCGGTAGGTGGGTTTAGGCA
454 TACGCCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
18786677 C
519 C
18786678 TATAGATACT
Statistics
Matches: 1252, Mismatches: 147, Indels: 34
0.87 0.10 0.02
Matches are distributed among these distances:
891 1 0.00
893 246 0.20
894 115 0.09
895 1 0.00
896 1 0.00
897 245 0.20
898 231 0.18
899 76 0.06
900 333 0.27
901 1 0.00
902 2 0.00
ACGTcount: A:0.25, C:0.26, G:0.26, T:0.24
Consensus pattern (897 bp):
GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
CGATCGTCGAAACCCTAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA
TGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
TCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
CAACCCACGAAACGAGCGTGCGGGCGCTCAGACGGCCAGAGGGGCAGGATGCGCAAGCCGGGGAT
CAACCGGGTCCCCCTCCGTATGTTGCTGATCCTGCTGCCGCAACACTCGATCCGGTCTGATCTTA
GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGCGGGCGGGCACTA
CGCCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
TCTTCATATTTCAGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAG
CCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTCTCACAATTTTTGAAACTTTTT
ACAGTTCAAGATTTTTTAAAATTTTTTCGGAAGTGGTTTTGGCCCCAAACTTGTAGACGGGATCC
TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGA
CCATTTGAAAAAAGTGCCCCCATTTGAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
TCAAATGCTCTTTAAGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGGG
Found at i:18786775 original size:20 final size:19
Alignment explanation
Indices: 18786746--18786794 Score: 62
Period size: 20 Copynumber: 2.5 Consensus size: 19
18786736 CCCAATGCAA
*
18786746 TTTTTACTTTGTATTATTT
1 TTTTTTCTTTGTATTATTT
* *
18786765 TTTTTCTCTTTTTTTTATTT
1 TTTTT-TCTTTGTATTATTT
18786785 TTTTTTCTTT
1 TTTTTTCTTT
18786795 CTTTTTTTTC
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
19 10 0.38
20 16 0.62
ACGTcount: A:0.08, C:0.08, G:0.02, T:0.82
Consensus pattern (19 bp):
TTTTTTCTTTGTATTATTT
Found at i:18786778 original size:10 final size:9
Alignment explanation
Indices: 18786762--18786808 Score: 53
Period size: 9 Copynumber: 5.4 Consensus size: 9
18786752 CTTTGTATTA
18786762 TTTTTTTTC
1 TTTTTTTTC
*
18786771 TCTTTTTT-
1 TTTTTTTTC
*
18786779 TTATTTTT-
1 TTTTTTTTC
*
18786787 TTTTCTTTC
1 TTTTTTTTC
18786796 TTTTTTTTC
1 TTTTTTTTC
18786805 TTTT
1 TTTT
18786809 GTATTTTATG
Statistics
Matches: 31, Mismatches: 6, Indels: 2
0.79 0.15 0.05
Matches are distributed among these distances:
8 12 0.39
9 19 0.61
ACGTcount: A:0.02, C:0.11, G:0.00, T:0.87
Consensus pattern (9 bp):
TTTTTTTTC
Found at i:18786785 original size:19 final size:20
Alignment explanation
Indices: 18786763--18786800 Score: 60
Period size: 19 Copynumber: 1.9 Consensus size: 20
18786753 TTTGTATTAT
18786763 TTTTTTTCTCTTT-TTTTTA
1 TTTTTTTCTCTTTCTTTTTA
*
18786782 TTTTTTTTTCTTTCTTTTT
1 TTTTTTTCTCTTTCTTTTT
18786801 TTTCTTTTGT
Statistics
Matches: 17, Mismatches: 1, Indels: 1
0.89 0.05 0.05
Matches are distributed among these distances:
19 12 0.71
20 5 0.29
ACGTcount: A:0.03, C:0.11, G:0.00, T:0.87
Consensus pattern (20 bp):
TTTTTTTCTCTTTCTTTTTA
Found at i:18786788 original size:23 final size:23
Alignment explanation
Indices: 18786762--18786808 Score: 71
Period size: 23 Copynumber: 2.1 Consensus size: 23
18786752 CTTTGTATTA
18786762 TTTTTTTTC--TCTTTTTTTTAT
1 TTTTTTTTCTTTCTTTTTTTTAT
*
18786783 TTTTTTTTCTTTCTTTTTTTTCT
1 TTTTTTTTCTTTCTTTTTTTTAT
18786806 TTT
1 TTT
18786809 GTATTTTATG
Statistics
Matches: 23, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
21 9 0.39
23 14 0.61
ACGTcount: A:0.02, C:0.11, G:0.00, T:0.87
Consensus pattern (23 bp):
TTTTTTTTCTTTCTTTTTTTTAT
Found at i:18786799 original size:20 final size:20
Alignment explanation
Indices: 18786759--18786800 Score: 68
Period size: 20 Copynumber: 2.1 Consensus size: 20
18786749 TTACTTTGTA
18786759 TTATTTTTTTTCTCTTTTTT
1 TTATTTTTTTTCTCTTTTTT
18786779 TTATTTTTTTT-TCTTTCTTT
1 TTATTTTTTTTCTCTTT-TTT
18786799 TT
1 TT
18786801 TTTCTTTTGT
Statistics
Matches: 21, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
19 5 0.24
20 16 0.76
ACGTcount: A:0.05, C:0.10, G:0.00, T:0.86
Consensus pattern (20 bp):
TTATTTTTTTTCTCTTTTTT
Done.