Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35885061
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Warning! 165000 characters in sequence are not A, C, G, or T
File 125 of 195
Found at i:21391392 original size:18 final size:18
Alignment explanation
Indices: 21391343--21391399 Score: 80
Period size: 18 Copynumber: 3.2 Consensus size: 18
21391333 TTTATCTTAA
*
21391343 TTTTATTTTTATTT-TTG
1 TTTTATTTTTATTTATTT
* *
21391360 TTTTACTTTTCTTTATTT
1 TTTTATTTTTATTTATTT
21391378 TTTTATTTTTATTTATTT
1 TTTTATTTTTATTTATTT
21391396 TTTT
1 TTTT
21391400 TATTATTCTA
Statistics
Matches: 34, Mismatches: 5, Indels: 1
0.85 0.12 0.03
Matches are distributed among these distances:
17 12 0.35
18 22 0.65
ACGTcount: A:0.12, C:0.04, G:0.02, T:0.82
Consensus pattern (18 bp):
TTTTATTTTTATTTATTT
Found at i:21391477 original size:27 final size:27
Alignment explanation
Indices: 21391447--21391535 Score: 65
Period size: 27 Copynumber: 3.2 Consensus size: 27
21391437 CAAAAAAAAT
21391447 ATTTTTGAGGAAAAGTTGAAAGTATCA
1 ATTTTTGAGGAAAAGTTGAAAGTATCA
* ** * **
21391474 ATTTTCCTTAAAAATAAGTTTCAAA--AAAA
1 ATTTT--TGAGGAA-AAG-TTGAAAGTATCA
21391503 TATTTTTGAGGAAAAGTTGAAAGTATCA
1 -ATTTTTGAGGAAAAGTTGAAAGTATCA
21391531 ATTTT
1 ATTTT
21391536 CCTTGGAAAT
Statistics
Matches: 43, Mismatches: 12, Indels: 14
0.62 0.17 0.20
Matches are distributed among these distances:
26 5 0.12
27 13 0.30
28 6 0.14
29 6 0.14
30 8 0.19
31 5 0.12
ACGTcount: A:0.43, C:0.06, G:0.15, T:0.37
Consensus pattern (27 bp):
ATTTTTGAGGAAAAGTTGAAAGTATCA
Found at i:21391507 original size:57 final size:58
Alignment explanation
Indices: 21391421--21391943 Score: 676
Period size: 57 Copynumber: 9.0 Consensus size: 58
21391411 TTTCTCTAAA
21391421 TAAAAATCAAAATTTCCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT-AAAATTT-C-AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
*
21391482 TAAAAAT-AAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
** *
21391539 TGGAAATCAAAGTTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTGT-CT
1 TAAAAAT-AAAATTTC-AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTT-TCCT
* *
21391599 TAAAAAT-AAATTTCCAAAAAATATTTTTGAGG-AAAGTTGAAAGTATCAATTTTTCT
1 TAAAAATAAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
21391655 TAAAAATAAAATTTCAAAAAAA-AGGGTTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAAATTTCAAAAAAATA---TTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
* *
21391715 T-GAAATCAAAATTTTC-AAAAAATATTTTT-AGGGAAAAGATGAAAGTATCAATTTTCCT
1 TAAAAAT-AAAA-TTTCAAAAAAATATTTTTGA-GGAAAAGTTGAAAGTATCAATTTTCCT
** * *
21391773 T-GGAATCAAAGTTTCAAAAAAAATATTTTTTAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT-AAAATTTC-AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
*
21391832 T-AAAAT-AAATTT-ACAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAAATTTCA-AAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
* * *
21391888 TAAAAATAAATTTTC-AAAAAATATTTTTGGGGAAAAGTTGAAAGTACCAATTTTCC
1 TAAAAATAAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCC
21391944 CACACAAGAA
Statistics
Matches: 420, Mismatches: 21, Indels: 46
0.86 0.04 0.09
Matches are distributed among these distances:
55 2 0.00
56 71 0.17
57 133 0.32
58 52 0.12
59 68 0.16
60 81 0.19
61 13 0.03
ACGTcount: A:0.45, C:0.08, G:0.13, T:0.34
Consensus pattern (58 bp):
TAAAAATAAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:21391561 original size:117 final size:117
Alignment explanation
Indices: 21391421--21391943 Score: 728
Period size: 117 Copynumber: 4.5 Consensus size: 117
21391411 TTTCTCTAAA
21391421 TAAAAATCAAAATTTCCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAA
1 TAAAAATCAAAATTT-CAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAA
*
21391486 AATAAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
65 AATAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
** *
21391539 TGGAAATCAAAGTTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTGT-CTTAAA
1 TAAAAATCAAAATTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTT-TCCTTAAA
* *
21391603 AATAAATTTCCAAAAAATATTTTTGAGG-AAAGTTGAAAGTATCAATTTTTCT
65 AATAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
**
21391655 TAAAAAT-AAAATTTCAAAAAAAAGGGTTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTGAA
1 TAAAAATCAAAATTTCAAAAAAAA-TATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTT-AA
* *
21391719 ATCAA-AATTTTC-AAAAAATATTTTT-AGGGAAAAGATGAAAGTATCAATTTTCCT
64 A--AATAAATTTCAAAAAAATATTTTTGA-GGAAAAGTTGAAAGTATCAATTTTCCT
** * *
21391773 T-GGAATCAAAGTTTCAAAAAAAATATTTTTTAGGAAAAGTTGAAAGTATCAATTTTCCTT-AAA
1 TAAAAATCAAAATTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAA
*
21391836 ATAAATTT-ACAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCT
66 ATAAATTTCA-AAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
* * *
21391888 TAAAAAT-AAATTTTC--AAAAAATATTTTTGGGGAAAAGTTGAAAGTACCAATTTTCC
1 TAAAAATCAAAATTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCC
21391944 CACACAAGAA
Statistics
Matches: 362, Mismatches: 29, Indels: 33
0.85 0.07 0.08
Matches are distributed among these distances:
113 40 0.11
114 5 0.01
115 65 0.18
116 65 0.18
117 128 0.35
118 57 0.16
119 2 0.01
ACGTcount: A:0.45, C:0.08, G:0.13, T:0.34
Consensus pattern (117 bp):
TAAAAATCAAAATTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAA
ATAAATTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:21391836 original size:233 final size:230
Alignment explanation
Indices: 21391421--21391943 Score: 797
Period size: 233 Copynumber: 2.2 Consensus size: 230
21391411 TTTCTCTAAA
21391421 TAAAAATCAAAATTTCCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAA
1 TAAAAAT-AAAATTT-C-AAAAAAA-ATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAA
*
21391486 AATAAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTGGAAATCAAAG
62 AATAAGTTTCAAAAAAATATTTTTGAGGAAAAGATGAAAGTATCAATTTTCCTTGGAAATCAAAG
*
21391551 TTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTGTCTTAAAAATAAATTTCCAA
127 TTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTGTCTT-AAAATAAATTTACAA
*
21391616 AAAATATTTTTGAGG-AAAGTTGAAAGTATCAATTTTTCT
191 AAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
21391655 TAAAAATAAAATTTCAAAAAAAAGGGTTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTGAAA
1 TAAAAATAAAATTTCAAAAAAAA---TTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTT-AAA
*
21391720 TCAA-AATTTTC-AAAAAATATTTTT-AGGGAAAAGATGAAAGTATCAATTTTCCTTGG-AATCA
62 --AATAAGTTTCAAAAAAATATTTTTGA-GGAAAAGATGAAAGTATCAATTTTCCTTGGAAATCA
*
21391781 AAGTTTCAAAAAAAATATTTTTTAGGAAAAGTTGAAAGTATCAATTT-TCCTTAAAATAAATTTA
124 AAGTTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTGT-CTTAAAATAAATTTA
*
21391845 CAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCCT
188 CAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
* * * *
21391888 TAAAAATAAATTTTCAAAAAATATTTTTGGGGAAAAGTTGAAAGTACCAATTTTCC
1 TAAAAATAAAATTTCAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCC
21391944 CACACAAGAA
Statistics
Matches: 270, Mismatches: 10, Indels: 22
0.89 0.03 0.07
Matches are distributed among these distances:
230 32 0.12
231 7 0.03
232 30 0.11
233 141 0.52
234 52 0.19
235 6 0.02
236 2 0.01
ACGTcount: A:0.45, C:0.08, G:0.13, T:0.34
Consensus pattern (230 bp):
TAAAAATAAAATTTCAAAAAAAATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCTTAAAAATA
AGTTTCAAAAAAATATTTTTGAGGAAAAGATGAAAGTATCAATTTTCCTTGGAAATCAAAGTTTC
AAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTGTCTTAAAATAAATTTACAAAAAAT
ATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:21391988 original size:6 final size:6
Alignment explanation
Indices: 21391977--21392005 Score: 58
Period size: 6 Copynumber: 4.8 Consensus size: 6
21391967 ATTCCTTTCT
21391977 ATTTTG ATTTTG ATTTTG ATTTTG ATTTT
1 ATTTTG ATTTTG ATTTTG ATTTTG ATTTT
21392006 TCTTTAACCA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
6 23 1.00
ACGTcount: A:0.17, C:0.00, G:0.14, T:0.69
Consensus pattern (6 bp):
ATTTTG
Found at i:21392813 original size:23 final size:23
Alignment explanation
Indices: 21392755--21392816 Score: 106
Period size: 23 Copynumber: 2.7 Consensus size: 23
21392745 TCTTTTGTCA
*
21392755 TGTTAGGATTTCGTTTCGAGTGAT
1 TGTT-GGATTTCTTTTCGAGTGAT
21392779 TGTTGGATTTCTTTTCGAGTGAT
1 TGTTGGATTTCTTTTCGAGTGAT
21392802 TGTTGGATTTCTTTT
1 TGTTGGATTTCTTTT
21392817 TGCAATGTGA
Statistics
Matches: 37, Mismatches: 1, Indels: 1
0.95 0.03 0.03
Matches are distributed among these distances:
23 33 0.89
24 4 0.11
ACGTcount: A:0.13, C:0.08, G:0.26, T:0.53
Consensus pattern (23 bp):
TGTTGGATTTCTTTTCGAGTGAT
Found at i:21393314 original size:11 final size:11
Alignment explanation
Indices: 21393300--21393324 Score: 50
Period size: 11 Copynumber: 2.3 Consensus size: 11
21393290 AAAAGGTCTC
21393300 AAAAATAAAAA
1 AAAAATAAAAA
21393311 AAAAATAAAAA
1 AAAAATAAAAA
21393322 AAA
1 AAA
21393325 TGCCACACAT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 14 1.00
ACGTcount: A:0.92, C:0.00, G:0.00, T:0.08
Consensus pattern (11 bp):
AAAAATAAAAA
Found at i:21393683 original size:20 final size:18
Alignment explanation
Indices: 21393646--21393688 Score: 59
Period size: 20 Copynumber: 2.3 Consensus size: 18
21393636 ACAATGGATG
*
21393646 AAAAATGAGAAAAGAGAA
1 AAAAATGAGAAAAAAGAA
21393664 AAAAGATGATGAAAAAAGAA
1 AAAA-ATGA-GAAAAAAGAA
21393684 AAAAA
1 AAAAA
21393689 AAAGAAAATG
Statistics
Matches: 22, Mismatches: 1, Indels: 3
0.85 0.04 0.12
Matches are distributed among these distances:
18 4 0.18
19 5 0.23
20 13 0.59
ACGTcount: A:0.74, C:0.00, G:0.19, T:0.07
Consensus pattern (18 bp):
AAAAATGAGAAAAAAGAA
Found at i:21393699 original size:24 final size:25
Alignment explanation
Indices: 21393662--21393712 Score: 77
Period size: 24 Copynumber: 2.1 Consensus size: 25
21393652 GAGAAAAGAG
**
21393662 AAAAAAGATGATGAAAAAA-GAAAA
1 AAAAAAGAAAATGAAAAAATGAAAA
21393686 AAAAAAGAAAATGAAAAAATGAAAA
1 AAAAAAGAAAATGAAAAAATGAAAA
21393711 AA
1 AA
21393713 GGAGATTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
24 17 0.71
25 7 0.29
ACGTcount: A:0.78, C:0.00, G:0.14, T:0.08
Consensus pattern (25 bp):
AAAAAAGAAAATGAAAAAATGAAAA
Found at i:21395074 original size:41 final size:42
Alignment explanation
Indices: 21394961--21395096 Score: 247
Period size: 42 Copynumber: 3.3 Consensus size: 42
21394951 ATGATTGTCA
21394961 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
21395003 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
* *
21395045 ATGAGCAATTTAC-TTTCCAAAGTCGTGGTGCCTCTATTTAG
1 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
21395086 AGGAGCAATTT
1 AGGAGCAATTT
21395097 CTCTATTTAG
Statistics
Matches: 91, Mismatches: 3, Indels: 1
0.96 0.03 0.01
Matches are distributed among these distances:
41 37 0.41
42 54 0.59
ACGTcount: A:0.24, C:0.18, G:0.23, T:0.35
Consensus pattern (42 bp):
AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
Found at i:21395102 original size:21 final size:21
Alignment explanation
Indices: 21395076--21395117 Score: 84
Period size: 21 Copynumber: 2.0 Consensus size: 21
21395066 GTCGTGGTGC
21395076 CTCTATTTAGAGGAGCAATTT
1 CTCTATTTAGAGGAGCAATTT
21395097 CTCTATTTAGAGGAGCAATTT
1 CTCTATTTAGAGGAGCAATTT
21395118 ACTTTCCAAA
Statistics
Matches: 21, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
21 21 1.00
ACGTcount: A:0.29, C:0.14, G:0.19, T:0.38
Consensus pattern (21 bp):
CTCTATTTAGAGGAGCAATTT
Found at i:21395137 original size:62 final size:62
Alignment explanation
Indices: 21395035--21395158 Score: 203
Period size: 62 Copynumber: 2.0 Consensus size: 62
21395025 GTCGTGGTGC
* * **
21395035 CTCTGTTTAGATGAGCAATTTACTTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTT
1 CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGCCTCTATTTAGAGGAGCAATTT
*
21395097 CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGCCTCTGTTTAGAGGAGCAATTT
1 CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGCCTCTATTTAGAGGAGCAATTT
21395159 ATTTTCCAAA
Statistics
Matches: 57, Mismatches: 5, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
62 57 1.00
ACGTcount: A:0.26, C:0.18, G:0.21, T:0.35
Consensus pattern (62 bp):
CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGCCTCTATTTAGAGGAGCAATTT
Found at i:21395159 original size:41 final size:41
Alignment explanation
Indices: 21395097--21395194 Score: 160
Period size: 41 Copynumber: 2.4 Consensus size: 41
21395087 GGAGCAATTT
21395097 CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGC
1 CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGC
* * **
21395138 CTCTGTTTAGAGGAGCAATTTATTTTCCAAAGTCGTGGTGC
1 CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGC
21395179 CTCTATTTAGAGGAGC
1 CTCTATTTAGAGGAGC
21395195 TTTAAAAAAA
Statistics
Matches: 52, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
41 52 1.00
ACGTcount: A:0.26, C:0.18, G:0.22, T:0.34
Consensus pattern (41 bp):
CTCTATTTAGAGGAGCAATTTACTTTCCAAAGTCAAGGTGC
Found at i:21395178 original size:103 final size:104
Alignment explanation
Indices: 21394993--21395194 Score: 352
Period size: 103 Copynumber: 2.0 Consensus size: 104
21394983 GTCGTGGTGC
* ** *
21394993 CTCTGTTTAGAGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAGATGAGCAATTTAC
1 CTCTATTTAGAGGAGCAATTTACTTTTCCAAAGTCAAGGTGCCTCTGTTTAGAGGAGCAATTTAC
21395058 TTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTT
66 TTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTT
*
21395097 CTCTATTTAGAGGAGCAATTTAC-TTTCCAAAGTCAAGGTGCCTCTGTTTAGAGGAGCAATTTAT
1 CTCTATTTAGAGGAGCAATTTACTTTTCCAAAGTCAAGGTGCCTCTGTTTAGAGGAGCAATTTAC
21395161 TTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGC
66 TTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGC
21395195 TTTAAAAAAA
Statistics
Matches: 93, Mismatches: 5, Indels: 1
0.94 0.05 0.01
Matches are distributed among these distances:
103 71 0.76
104 22 0.24
ACGTcount: A:0.24, C:0.18, G:0.22, T:0.35
Consensus pattern (104 bp):
CTCTATTTAGAGGAGCAATTTACTTTTCCAAAGTCAAGGTGCCTCTGTTTAGAGGAGCAATTTAC
TTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTT
Found at i:21395215 original size:12 final size:12
Alignment explanation
Indices: 21395198--21395227 Score: 60
Period size: 12 Copynumber: 2.5 Consensus size: 12
21395188 GAGGAGCTTT
21395198 AAAAAAAAACAA
1 AAAAAAAAACAA
21395210 AAAAAAAAACAA
1 AAAAAAAAACAA
21395222 AAAAAA
1 AAAAAA
21395228 GGGTTGCCTC
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.93, C:0.07, G:0.00, T:0.00
Consensus pattern (12 bp):
AAAAAAAAACAA
Found at i:21395330 original size:13 final size:13
Alignment explanation
Indices: 21395314--21395348 Score: 54
Period size: 13 Copynumber: 2.7 Consensus size: 13
21395304 AAATTTTTTA
21395314 AAAAAAAAAGAGG-
1 AAAAAAAAAG-GGC
21395327 AAAAAAAAAGGGC
1 AAAAAAAAAGGGC
21395340 AAAAAAAAA
1 AAAAAAAAA
21395349 TAAAAAAATA
Statistics
Matches: 21, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
12 2 0.10
13 19 0.90
ACGTcount: A:0.80, C:0.03, G:0.17, T:0.00
Consensus pattern (13 bp):
AAAAAAAAAGGGC
Found at i:21395353 original size:9 final size:9
Alignment explanation
Indices: 21395341--21395371 Score: 55
Period size: 9 Copynumber: 3.6 Consensus size: 9
21395331 AAAAAGGGCA
21395341 AAAAAAAAT
1 AAAAAAAAT
21395350 -AAAAAAAT
1 AAAAAAAAT
21395358 AAAAAAAAT
1 AAAAAAAAT
21395367 AAAAA
1 AAAAA
21395372 TGTTAAGTTG
Statistics
Matches: 21, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
8 8 0.38
9 13 0.62
ACGTcount: A:0.90, C:0.00, G:0.00, T:0.10
Consensus pattern (9 bp):
AAAAAAAAT
Found at i:21395355 original size:7 final size:8
Alignment explanation
Indices: 21395342--21395371 Score: 51
Period size: 8 Copynumber: 3.6 Consensus size: 8
21395332 AAAAGGGCAA
21395342 AAAAAAAT
1 AAAAAAAT
21395350 AAAAAAAT
1 AAAAAAAT
21395358 AAAAAAAAT
1 -AAAAAAAT
21395367 AAAAA
1 AAAAA
21395372 TGTTAAGTTG
Statistics
Matches: 21, Mismatches: 0, Indels: 2
0.91 0.00 0.09
Matches are distributed among these distances:
8 13 0.62
9 8 0.38
ACGTcount: A:0.90, C:0.00, G:0.00, T:0.10
Consensus pattern (8 bp):
AAAAAAAT
Found at i:21395528 original size:6 final size:6
Alignment explanation
Indices: 21395514--21395650 Score: 165
Period size: 6 Copynumber: 22.7 Consensus size: 6
21395504 TAAGTATATG
* *
21395514 TTTTT- TTTTTA -TTTTA TTTTTG TTTTTA TTTTCA TTTTTA TTTTTA
1 TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA
21395560 TTTTTA -TTTTA TTTTTA TTTTTA -TTTTA TTTTTA TTTTTA TTTTTA
1 TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA
* *
21395606 TTTTATTA TTATTA TTTTATA TTTTTTT TCTTTTA TTTTTA TTTT
1 -TTT-TTA TTTTTA TTTT-TA -TTTTTA T-TTTTA TTTTTA TTTT
21395651 AGCTATTTAC
Statistics
Matches: 115, Mismatches: 8, Indels: 17
0.82 0.06 0.12
Matches are distributed among these distances:
5 20 0.17
6 75 0.65
7 13 0.11
8 7 0.06
ACGTcount: A:0.16, C:0.01, G:0.01, T:0.82
Consensus pattern (6 bp):
TTTTTA
Found at i:21395533 original size:11 final size:11
Alignment explanation
Indices: 21395514--21395651 Score: 142
Period size: 11 Copynumber: 12.5 Consensus size: 11
21395504 TAAGTATATG
*
21395514 TTTTTTTTTTA
1 TTTTATTTTTA
*
21395525 TTTTATTTTTGT
1 TTTTATTTTT-A
*
21395537 TTTTATTTTCA
1 TTTTATTTTTA
21395548 TTTTTATTTTTA
1 -TTTTATTTTTA
21395560 TTTT-TATTTTA
1 TTTTAT-TTTTA
21395571 TTTTTATTTTTA
1 -TTTTATTTTTA
21395583 TTTTATTTTTA
1 TTTTATTTTTA
21395594 TTTTTATTTTTA
1 -TTTTATTTTTA
*
21395606 TTTTATTATTA
1 TTTTATTTTTA
21395617 --TTA-TTTTA
1 TTTTATTTTTA
*
21395625 TATTT-TTTTTC
1 T-TTTATTTTTA
21395636 TTTTATTTTTA
1 TTTTATTTTTA
21395647 TTTTA
1 TTTTA
21395652 GCTATTTACT
Statistics
Matches: 107, Mismatches: 9, Indels: 22
0.78 0.07 0.16
Matches are distributed among these distances:
8 4 0.04
9 3 0.03
10 4 0.04
11 56 0.52
12 39 0.36
13 1 0.01
ACGTcount: A:0.17, C:0.01, G:0.01, T:0.81
Consensus pattern (11 bp):
TTTTATTTTTA
Found at i:21395539 original size:17 final size:17
Alignment explanation
Indices: 21395514--21395650 Score: 161
Period size: 17 Copynumber: 7.9 Consensus size: 17
21395504 TAAGTATATG
*
21395514 TTTTTTTTTTA-TTTTA
1 TTTTATTTTTATTTTTA
* *
21395530 TTTTTGTTTTTATTTTCA
1 -TTTTATTTTTATTTTTA
21395548 TTTTTATTTTTATTTTTA
1 -TTTTATTTTTATTTTTA
21395566 TTTTATTTTTATTTTTA
1 TTTTATTTTTATTTTTA
21395583 TTTTATTTTTATTTTTA
1 TTTTATTTTTATTTTTA
*
21395600 TTTTTATTTTATTATTATTA
1 -TTTTA-TTT-TTATTTTTA
* *
21395620 TTTTATATTT-TTTTTC
1 TTTTATTTTTATTTTTA
21395636 TTTTATTTTTATTTT
1 TTTTATTTTTATTTT
21395651 AGCTATTTAC
Statistics
Matches: 106, Mismatches: 9, Indels: 10
0.85 0.07 0.08
Matches are distributed among these distances:
16 13 0.12
17 50 0.47
18 27 0.25
19 8 0.08
20 8 0.08
ACGTcount: A:0.16, C:0.01, G:0.01, T:0.82
Consensus pattern (17 bp):
TTTTATTTTTATTTTTA
Found at i:21396372 original size:16 final size:17
Alignment explanation
Indices: 21396344--21396380 Score: 58
Period size: 16 Copynumber: 2.2 Consensus size: 17
21396334 CAGTTTTTAG
21396344 AGAGAAGGAAGAGAAAA
1 AGAGAAGGAAGAGAAAA
*
21396361 AGAGAA-GAAGAGAAAG
1 AGAGAAGGAAGAGAAAA
21396377 AGAG
1 AGAG
21396381 GAGAGGAGCT
Statistics
Matches: 19, Mismatches: 1, Indels: 1
0.90 0.05 0.05
Matches are distributed among these distances:
16 13 0.68
17 6 0.32
ACGTcount: A:0.62, C:0.00, G:0.38, T:0.00
Consensus pattern (17 bp):
AGAGAAGGAAGAGAAAA
Found at i:21396737 original size:17 final size:16
Alignment explanation
Indices: 21396703--21396742 Score: 53
Period size: 17 Copynumber: 2.4 Consensus size: 16
21396693 TTAGATTAGG
*
21396703 TTTATTTAATATTCTT
1 TTTATTTAATATTATT
*
21396719 TTTATCTTAATTTTATT
1 TTTAT-TTAATATTATT
21396736 TTTATTT
1 TTTATTT
21396743 TTGTTTTACT
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
16 7 0.33
17 14 0.67
ACGTcount: A:0.23, C:0.05, G:0.00, T:0.72
Consensus pattern (16 bp):
TTTATTTAATATTATT
Found at i:21396760 original size:27 final size:25
Alignment explanation
Indices: 21396730--21396798 Score: 75
Period size: 27 Copynumber: 2.6 Consensus size: 25
21396720 TTATCTTAAT
*
21396730 TTTATTTTTATTTTTGTTTTACTTTTC
1 TTTATTTTTATTTTT-ATTTA-TTTTC
*
21396757 TTTATTTTTTATTTTTATTTATTTTT
1 TTTA-TTTTTATTTTTATTTATTTTC
21396783 TTTATTATTCTATTTT
1 TTTATT-TT-TATTTT
21396799 CTTTAAATAA
Statistics
Matches: 37, Mismatches: 2, Indels: 6
0.82 0.04 0.13
Matches are distributed among these distances:
25 2 0.05
26 10 0.27
27 14 0.38
28 11 0.30
ACGTcount: A:0.14, C:0.04, G:0.01, T:0.80
Consensus pattern (25 bp):
TTTATTTTTATTTTTATTTATTTTC
Found at i:21396777 original size:17 final size:17
Alignment explanation
Indices: 21396729--21396798 Score: 81
Period size: 17 Copynumber: 4.1 Consensus size: 17
21396719 TTTATCTTAA
21396729 TTTTATTTTTATTT-TT
1 TTTTATTTTTATTTATT
* *
21396745 GTTTTACTTTTCTTTATT
1 -TTTTATTTTTATTTATT
21396763 TTTTATTTTTATTTATT
1 TTTTATTTTTATTTATT
*
21396780 TTTT-TTATTATTCTATT
1 TTTTATTTTTATT-TATT
21396797 TT
1 TT
21396799 CTTTAAATAA
Statistics
Matches: 46, Mismatches: 5, Indels: 4
0.84 0.09 0.07
Matches are distributed among these distances:
16 7 0.15
17 37 0.80
18 2 0.04
ACGTcount: A:0.14, C:0.04, G:0.01, T:0.80
Consensus pattern (17 bp):
TTTTATTTTTATTTATT
Found at i:21396861 original size:27 final size:27
Alignment explanation
Indices: 21396831--21396919 Score: 65
Period size: 27 Copynumber: 3.2 Consensus size: 27
21396821 CCAAAAAACT
21396831 ATTTTTGAGGAAAAGTTGAAAGTATCA
1 ATTTTTGAGGAAAAGTTGAAAGTATCA
* ** * **
21396858 ATTTTCCTTAAAAATAAGTTTCAAA--AAAA
1 ATTTT--TGAGGAA-AAG-TTGAAAGTATCA
21396887 TATTTTTGAGGAAAAGTTGAAAGTATCA
1 -ATTTTTGAGGAAAAGTTGAAAGTATCA
21396915 ATTTT
1 ATTTT
21396920 CCTTAAAAAT
Statistics
Matches: 43, Mismatches: 12, Indels: 14
0.62 0.17 0.20
Matches are distributed among these distances:
26 5 0.12
27 13 0.30
28 6 0.14
29 6 0.14
30 8 0.19
31 5 0.12
ACGTcount: A:0.43, C:0.06, G:0.15, T:0.37
Consensus pattern (27 bp):
ATTTTTGAGGAAAAGTTGAAAGTATCA
Found at i:21396891 original size:57 final size:58
Alignment explanation
Indices: 21396806--21397158 Score: 432
Period size: 57 Copynumber: 6.0 Consensus size: 58
21396796 TTTCTTTAAA
* *
21396806 TAAAAATCAAAATTTCCAAAAAACTATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT-AAAGTTT-CAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
21396866 TAAAAAT-AAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
* **
21396923 TAAAAATAAAATTTCAAAAAAAGGGTTTTTGAGGAAAAGTTGAAAAGTATC-ATTTTCCCT
1 TAAAAATAAAGTTTCAAAAAAA-TATTTTTGAGGAAAAGTTG-AAAGTATCAATTTT-CCT
* *
21396983 TGAAATCAA-AAATTTTC-AAAAAATATTTTT-AGGGAAAAGATGAAAAGTATCAATTTTCCT
1 T-AAA--AATAAAGTTTCAAAAAAATATTTTTGA-GGAAAAGTTG-AAAGTATCAATTTTCCT
**
21397043 TGGAAATCAAAGTTTTCAAAAAAAATATTTTT-AGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT-AAAG-TTTC-AAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
* * *
21397103 TAAAAATAAATTTTC-AAAAAATATTTTTGGGGAAAAGTTGAAAGTACCAATTTTCC
1 TAAAAATAAAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCC
21397159 CTACACAAGA
Statistics
Matches: 260, Mismatches: 18, Indels: 33
0.84 0.06 0.11
Matches are distributed among these distances:
56 13 0.05
57 77 0.30
58 22 0.08
59 30 0.12
60 72 0.28
61 23 0.09
62 21 0.08
63 2 0.01
ACGTcount: A:0.45, C:0.09, G:0.12, T:0.34
Consensus pattern (58 bp):
TAAAAATAAAGTTTCAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:21401055 original size:20 final size:18
Alignment explanation
Indices: 21401018--21401060 Score: 59
Period size: 20 Copynumber: 2.3 Consensus size: 18
21401008 ACAATGGATG
*
21401018 AAAAATGAGAAAAGAGAA
1 AAAAATGAGAAAAAAGAA
21401036 AAAAGATGATGAAAAAAGAA
1 AAAA-ATGA-GAAAAAAGAA
21401056 AAAAA
1 AAAAA
21401061 AAGAAAGAAA
Statistics
Matches: 22, Mismatches: 1, Indels: 3
0.85 0.04 0.12
Matches are distributed among these distances:
18 4 0.18
19 5 0.23
20 13 0.59
ACGTcount: A:0.74, C:0.00, G:0.19, T:0.07
Consensus pattern (18 bp):
AAAAATGAGAAAAAAGAA
Found at i:21401067 original size:27 final size:25
Alignment explanation
Indices: 21401014--21401086 Score: 65
Period size: 27 Copynumber: 2.7 Consensus size: 25
21401004 ATCAACAATG
*
21401014 GATGAAAAATGAGAAAAGAGAAAAAAGA
1 GATGAAAAA--AGAAAA-AAAAAAAAGA
21401042 TGATGAAAAAAGAAAAAAAAAGAAAGA
1 -GATGAAAAAAGAAAAAAAAA-AAAGA
* *
21401069 AATGAGAAAATGAAAAAA
1 GATGA-AAAAAGAAAAAA
21401087 GGAGATTCAA
Statistics
Matches: 39, Mismatches: 3, Indels: 6
0.81 0.06 0.12
Matches are distributed among these distances:
26 8 0.21
27 22 0.56
29 9 0.23
ACGTcount: A:0.71, C:0.00, G:0.21, T:0.08
Consensus pattern (25 bp):
GATGAAAAAAGAAAAAAAAAAAAGA
Found at i:21402445 original size:41 final size:41
Alignment explanation
Indices: 21402325--21402594 Score: 378
Period size: 41 Copynumber: 6.5 Consensus size: 41
21402315 ATGATTGTCA
*
21402325 AGGAGCAATTTATTTTTTCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTA-TTTTCCAAAGTCGTGGTGCCTCTGTTTAG
*
21402367 AGGAGCAATTTACTTTTCCAAAGTCGTGGTACCTCTGTTTAG
1 AGGAGCAATTTA-TTTTCCAAAGTCGTGGTGCCTCTGTTTAG
* ** * * *
21402409 AGGAGCAATTTATTTTTCAAAGTTATTGTACTTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
* * *
21402450 AGGAGCAATTTACTTTCCTAAGTGGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
* ** *
21402491 AGGAGCAATTTATTTTTCAAAGTTATGGTGCCTCTGCTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
*
21402532 AGGAGCAATTTACTTTCCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
21402573 AGGAGCAATTTATTTTCCAAAG
1 AGGAGCAATTTATTTTCCAAAG
21402595 GAGCAATTTA
Statistics
Matches: 200, Mismatches: 28, Indels: 1
0.87 0.12 0.00
Matches are distributed among these distances:
41 149 0.75
42 51 0.25
ACGTcount: A:0.24, C:0.16, G:0.22, T:0.38
Consensus pattern (41 bp):
AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
Found at i:21402505 original size:82 final size:82
Alignment explanation
Indices: 21402325--21402594 Score: 432
Period size: 82 Copynumber: 3.3 Consensus size: 82
21402315 ATGATTGTCA
**
21402325 AGGAGCAATTTATTTTTTCAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTACTTTTCCAAAG
1 AGGAGCAATTTA-TTTTTCAAAGTTATGGTGCCTCTGTTTAGAGGAGCAATTTAC-TTTCCAAAG
*
21402390 TCGTGGTACCTCTGTTTAG
64 TCGTGGTGCCTCTGTTTAG
* * * * *
21402409 AGGAGCAATTTATTTTTCAAAGTTATTGTACTTCTGTTTAGAGGAGCAATTTACTTTCCTAAGTG
1 AGGAGCAATTTATTTTTCAAAGTTATGGTGCCTCTGTTTAGAGGAGCAATTTACTTTCCAAAGTC
21402474 GTGGTGCCTCTGTTTAG
66 GTGGTGCCTCTGTTTAG
*
21402491 AGGAGCAATTTATTTTTCAAAGTTATGGTGCCTCTGCTTAGAGGAGCAATTTACTTTCCAAAGTC
1 AGGAGCAATTTATTTTTCAAAGTTATGGTGCCTCTGTTTAGAGGAGCAATTTACTTTCCAAAGTC
21402556 GTGGTGCCTCTGTTTAG
66 GTGGTGCCTCTGTTTAG
*
21402573 AGGAGCAATTTATTTTCCAAAG
1 AGGAGCAATTTATTTTTCAAAG
21402595 GAGCAATTTA
Statistics
Matches: 171, Mismatches: 15, Indels: 2
0.91 0.08 0.01
Matches are distributed among these distances:
82 122 0.71
83 37 0.22
84 12 0.07
ACGTcount: A:0.24, C:0.16, G:0.22, T:0.38
Consensus pattern (82 bp):
AGGAGCAATTTATTTTTCAAAGTTATGGTGCCTCTGTTTAGAGGAGCAATTTACTTTCCAAAGTC
GTGGTGCCTCTGTTTAG
Found at i:21402598 original size:20 final size:20
Alignment explanation
Indices: 21402573--21402614 Score: 84
Period size: 20 Copynumber: 2.1 Consensus size: 20
21402563 CTCTGTTTAG
21402573 AGGAGCAATTTATTTTCCAA
1 AGGAGCAATTTATTTTCCAA
21402593 AGGAGCAATTTATTTTCCAA
1 AGGAGCAATTTATTTTCCAA
21402613 AG
1 AG
21402615 TCGTGGTGCC
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
20 22 1.00
ACGTcount: A:0.36, C:0.14, G:0.17, T:0.33
Consensus pattern (20 bp):
AGGAGCAATTTATTTTCCAA
Found at i:21402627 original size:61 final size:62
Alignment explanation
Indices: 21402532--21402656 Score: 225
Period size: 61 Copynumber: 2.0 Consensus size: 62
21402522 CTCTGCTTAG
*
21402532 AGGAGCAATTTACTTTCCAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTA-TTTTCCAA
1 AGGAGCAATTTACTTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTTACTTTTCCAA
*
21402593 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTTACTTTTCCAA
1 AGGAGCAATTTACTTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTTACTTTTCCAA
21402655 AG
1 AG
21402657 TCGTGGTGCC
Statistics
Matches: 61, Mismatches: 2, Indels: 1
0.95 0.03 0.02
Matches are distributed among these distances:
61 51 0.84
62 10 0.16
ACGTcount: A:0.27, C:0.18, G:0.21, T:0.34
Consensus pattern (62 bp):
AGGAGCAATTTACTTTCCAAAGTCGTGGTGCCTCTATTTAGAGGAGCAATTTACTTTTCCAA
Found at i:21402643 original size:41 final size:42
Alignment explanation
Indices: 21402593--21402681 Score: 162
Period size: 42 Copynumber: 2.1 Consensus size: 42
21402583 TATTTTCCAA
21402593 AGGAGCAATTTA-TTTTCCAAAGTCGTGGTGCCTCTATTTAG
1 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTATTTAG
*
21402634 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTATTTAG
21402676 AGGAGC
1 AGGAGC
21402682 TTTAAAAAAA
Statistics
Matches: 46, Mismatches: 1, Indels: 1
0.96 0.02 0.02
Matches are distributed among these distances:
41 12 0.26
42 34 0.74
ACGTcount: A:0.24, C:0.18, G:0.25, T:0.34
Consensus pattern (42 bp):
AGGAGCAATTTACTTTTCCAAAGTCGTGGTGCCTCTATTTAG
Found at i:21402804 original size:13 final size:14
Alignment explanation
Indices: 21402788--21402823 Score: 56
Period size: 13 Copynumber: 2.6 Consensus size: 14
21402778 AAATTTTTTT
21402788 AAAAAAAAAAAGG-
1 AAAAAAAAAAAGGC
*
21402801 AAAAAAAAAAGGGC
1 AAAAAAAAAAAGGC
21402815 AAAAAAAAA
1 AAAAAAAAA
21402824 CAATAAAATA
Statistics
Matches: 21, Mismatches: 1, Indels: 1
0.91 0.04 0.04
Matches are distributed among these distances:
13 12 0.57
14 9 0.43
ACGTcount: A:0.83, C:0.03, G:0.14, T:0.00
Consensus pattern (14 bp):
AAAAAAAAAAAGGC
Found at i:21403002 original size:6 final size:6
Alignment explanation
Indices: 21402991--21403122 Score: 83
Period size: 6 Copynumber: 22.2 Consensus size: 6
21402981 AAGTATATGG
** * *
21402991 TTATTT TTATTT TTA-TT TTATTT TCGTTT TTATTT TCATTT TTAATT
1 TTATTT TTATTT TTATTT TTATTT TTATTT TTATTT TTATTT TTATTT
* * * * * *
21403038 TTAATT TTAATT TTAATT TTAATT TTATTT TAATTTT ATTATTA TTATTT
1 TTATTT TTATTT TTATTT TTATTT TTATTT TTA-TTT -TTATTT TTATTT
* * * *
21403088 TATATAT ATATAT TT-TTT TT-CTT TTATTT TT-TTT T
1 T-TATTT TTATTT TTATTT TTATTT TTATTT TTATTT T
21403123 AGCTATTTAC
Statistics
Matches: 103, Mismatches: 18, Indels: 11
0.78 0.14 0.08
Matches are distributed among these distances:
5 17 0.17
6 75 0.73
7 9 0.09
8 2 0.02
ACGTcount: A:0.23, C:0.02, G:0.01, T:0.74
Consensus pattern (6 bp):
TTATTT
Found at i:21403039 original size:18 final size:17
Alignment explanation
Indices: 21402991--21403083 Score: 98
Period size: 17 Copynumber: 5.3 Consensus size: 17
21402981 AAGTATATGG
*
21402991 TTATTTTTATTTTTATT
1 TTATTTTTAATTTTATT
***
21403008 TTATTTTCGTTTTTATT
1 TTATTTTTAATTTTATT
21403025 TTCATTTTTAATTTTAATT
1 TT-ATTTTTAATTTT-ATT
*
21403044 TTAATTTTAATTTTAATT
1 TTATTTTTAATTTT-ATT
21403062 TTA-TTTTAATTTTATT
1 TTATTTTTAATTTTATT
21403078 ATTATT
1 -TTATT
21403084 ATTTTATATA
Statistics
Matches: 66, Mismatches: 6, Indels: 7
0.84 0.08 0.09
Matches are distributed among these distances:
16 3 0.05
17 30 0.45
18 28 0.42
19 5 0.08
ACGTcount: A:0.24, C:0.02, G:0.01, T:0.73
Consensus pattern (17 bp):
TTATTTTTAATTTTATT
Found at i:21403419 original size:12 final size:12
Alignment explanation
Indices: 21403404--21403470 Score: 73
Period size: 12 Copynumber: 5.7 Consensus size: 12
21403394 TATGTTTTTT
* *
21403404 TTTTTTTTTTCG
1 TTTTTATTTTCA
21403416 TTTTTATTTTCA
1 TTTTTATTTTCA
*
21403428 TTTTCATTTTCA
1 TTTTTATTTTCA
*
21403440 TTTTAATTTT-A
1 TTTTTATTTTCA
* *
21403451 ATTTTATTTTTA
1 TTTTTATTTTCA
21403463 TTTTTATT
1 TTTTTATT
21403471 ATTATTATTT
Statistics
Matches: 47, Mismatches: 7, Indels: 2
0.84 0.12 0.04
Matches are distributed among these distances:
11 9 0.19
12 38 0.81
ACGTcount: A:0.16, C:0.06, G:0.01, T:0.76
Consensus pattern (12 bp):
TTTTTATTTTCA
Found at i:21403467 original size:6 final size:6
Alignment explanation
Indices: 21403398--21403476 Score: 63
Period size: 6 Copynumber: 13.3 Consensus size: 6
21403388 TAAGTATATG
* * * * *
21403398 TTTTT- TTTTTT TTTTTCG TTTTTA TTTTCA TTTTCA TTTTCA -TTTTA
1 TTTTTA TTTTTA TTTTT-A TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA
* * *
21403445 ATTTTA ATTTTA TTTTTA TTTTTA TTATTA TT
1 TTTTTA TTTTTA TTTTTA TTTTTA TTTTTA TT
21403477 ATTTTATATA
Statistics
Matches: 65, Mismatches: 6, Indels: 5
0.86 0.08 0.07
Matches are distributed among these distances:
5 9 0.14
6 51 0.78
7 5 0.08
ACGTcount: A:0.16, C:0.05, G:0.01, T:0.77
Consensus pattern (6 bp):
TTTTTA
Found at i:21403474 original size:3 final size:3
Alignment explanation
Indices: 21403454--21403568 Score: 69
Period size: 3 Copynumber: 36.7 Consensus size: 3
21403444 AATTTTAATT
* *
21403454 TTA TTT TTA TTT TTA TTA TTA TTA TT- TTA TATA TATA TATA TT- TT-
1 TTA TTA TTA TTA TTA TTA TTA TTA TTA TTA T-TA T-TA T-TA TTA TTA
* *
21403499 TTA TT- TTA GCTA TTTA CTTA TTTA TTA ATA TGTA TATA TCT- TTA TTA
1 TTA TTA TTA -TTA -TTA -TTA -TTA TTA TTA T-TA T-TA T-TA TTA TTA
21403546 TTA TTA TTA TTA TTA TTA TTA TT
1 TTA TTA TTA TTA TTA TTA TTA TT
21403569 TTTTGTAATA
Statistics
Matches: 92, Mismatches: 13, Indels: 14
0.77 0.11 0.12
Matches are distributed among these distances:
2 9 0.10
3 55 0.60
4 28 0.30
ACGTcount: A:0.30, C:0.03, G:0.02, T:0.66
Consensus pattern (3 bp):
TTA
Found at i:21403475 original size:12 final size:12
Alignment explanation
Indices: 21403416--21403568 Score: 52
Period size: 12 Copynumber: 12.7 Consensus size: 12
21403406 TTTTTTTTCG
21403416 TTTTTATT-TTCA
1 TTTTTATTATT-A
*
21403428 TTTTCATT-TTCA
1 TTTTTATTATT-A
*
21403440 TTTTAATT-TTA
1 TTTTTATTATTA
* *
21403451 ATTTTATTTTTA
1 TTTTTATTATTA
21403463 TTTTTATTATTA
1 TTTTTATTATTA
*
21403475 TTATT-TTA-TA
1 TTTTTATTATTA
* *
21403485 TATATA-TA-TA
1 TTTTTATTATTA
21403495 TTTTTTATT-TTA
1 -TTTTTATTATTA
*
21403507 GCTATTTACTTATTTA
1 --TTTTTA-TTA-TTA
**
21403523 TTAATATGTATATA
1 TTTTTAT-TAT-TA
*
21403537 TCTTTATTATTA
1 TTTTTATTATTA
*
21403549 TTATTATTATTA
1 TTTTTATTATTA
*
21403561 TTATTATT
1 TTTTTATT
21403569 TTTTGTAATA
Statistics
Matches: 108, Mismatches: 22, Indels: 22
0.71 0.14 0.14
Matches are distributed among these distances:
10 8 0.07
11 14 0.13
12 60 0.56
13 10 0.09
14 13 0.12
16 3 0.03
ACGTcount: A:0.27, C:0.04, G:0.01, T:0.67
Consensus pattern (12 bp):
TTTTTATTATTA
Found at i:21403506 original size:44 final size:44
Alignment explanation
Indices: 21403452--21403585 Score: 127
Period size: 44 Copynumber: 3.1 Consensus size: 44
21403442 TTAATTTTAA
*
21403452 TTTTATTTTTATTTTTATTATTATTATTTTATATATATATATATT
1 TTTTA-TTTTATTTTTATTATTATTATTTTATATGTATATATATT
* * *
21403497 TTTTATTTTAGCTATTTACTTA-T-TTA-TTAATATGTATATATCTT
1 TTTTATTTTA--TTTTTA-TTATTATTATTTTATATGTATATATATT
* *
21403541 TATTATTATTATTATTATTATTATTATTTT-T-TGTA-ATATATT
1 TTTTATT-TTATTTTTATTATTATTATTTTATATGTATATATATT
21403583 TTT
1 TTT
21403586 GGGTTTATCT
Statistics
Matches: 72, Mismatches: 10, Indels: 17
0.73 0.10 0.17
Matches are distributed among these distances:
42 11 0.15
43 9 0.12
44 30 0.42
45 13 0.18
46 6 0.08
47 3 0.04
ACGTcount: A:0.28, C:0.02, G:0.02, T:0.67
Consensus pattern (44 bp):
TTTTATTTTATTTTTATTATTATTATTTTATATGTATATATATT
Found at i:21403624 original size:395 final size:401
Alignment explanation
Indices: 21402926--21403727 Score: 1236
Period size: 395 Copynumber: 2.0 Consensus size: 401
21402916 GAGGGGCAGC
21402926 TGTAGACACCCAATTTGGTCCAGGCCCGGATCAATTGGGCCTGGCCCAAATAGGTAAGTATATGG
1 TGTAGACACCCAATTTGGTCCAGGCCCGGATCAATTGGGCCTGGCCCAAATAGGTAAGTATATGG
21402991 TTATTTTTATTTTTATTTTATTTTCGTTTTTATTTTCATTTTTAATTTTAATTTTAATTTTAATT
66 ----TTTTATTTTTATTTTATTTTCGTTTTTATTTTCATTTTTAATTTTAATTTTAATTTTAATT
* * ** *
21403056 TTAATTTTATTTTAATTTTATTATTATTATTTTATATATATATATTTTTTTTCTTTTATTTTTTT
127 TTAA--TTATTTTAATTTTATTATTATTATTTTATATATATATATATTTTTTATTTTA-TGCTAT
21403121 TTAGCTATTTACTTATTTATTAATATGTATATATCTTTATTATTATTATTATTTTTTGTAATATA
189 TTAGCTATTTACTTATTTATTAATATGTATATATCTTTATTATTATTATTATTTTTTGTAATATA
* *
21403186 TTTTTGGGTTTATGTTATTTTATTTTTTATTATTTTTTTAAATTATCTGTTAATTTTATCTGATT
254 TTTTTGGGTTTATCTTATTTTATTTTTTATTATTTTTTTAAATTATCTATTAATTTTATCTGATT
* * *
21403251 TTTTTCTCGATTATCTGATTAGTATTATTATTTTTTGTTTTCTTTTTTTGATGGCTGTGATTGAA
319 TTTTTCCCGATTATCTGATTAGTATTATTATTTTTTGTTTTCTTTTTTTCATGGCTGTAATTGAA
21403316 AGTTGAAGAATCCCATTT
384 AGTTGAAGAATCCCATTT
21403334 TGTAGACACCCAATTTGGTCCAGGCCCGGATCAATTGGGCCTGGCCCAAATAGGTAAGTATAT-G
1 TGTAGACACCCAATTTGGTCCAGGCCCGGATCAATTGGGCCTGGCCCAAATAGGTAAGTATATGG
* *
21403398 -TTT-TTTTT-TTTT-TTTTCGTTTTTATTTTCA-TTTTCATTTTCATTTTAATTTTAATTTT-A
66 TTTTATTTTTATTTTATTTTCGTTTTTATTTTCATTTTTAATTTTAATTTTAATTTTAATTTTAA
*
21403457 -T-TTTTATTTTTATTATTATTATTTTATATATATATATATTTTTTATTTTA-GCTATTTA-CTT
131 TTATTTTAATTTTATTATTATTATTTTATATATATATATATTTTTTATTTTATGCTATTTAGC-T
* *
21403518 ATTTA-TTAATATGTA-TATATCTTTATTATTAT-TATTATTATTATTATTATTTTTTGTAATAT
195 ATTTACTT-AT-T-TATTA-ATATGTA-TA-TATCT-TTATTATTATTATTATTTTTTGTAATAT
21403580 ATTTTTGGGTTTATCTTATTTTATTTTTTATTATTTTTTTAAATTATCTATTAATTTTATCTGAT
253 ATTTTTGGGTTTATCTTATTTTATTTTTTATTATTTTTTTAAATTATCTATTAATTTTATCTGAT
21403645 TTTTTTCCCGATTATCTGATTAGTATTATTATTTTTTGTTTTCTTTTTTTCATGGCTGTAATTGA
318 TTTTTTCCCGATTATCTGATTAGTATTATTATTTTTTGTTTTCTTTTTTTCATGGCTGTAATTGA
21403710 AAGTTGAAGAATCCCATT
383 AAGTTGAAGAATCCCATT
21403728 GTGAATGGGA
Statistics
Matches: 371, Mismatches: 15, Indels: 29
0.89 0.04 0.07
Matches are distributed among these distances:
390 3 0.01
391 13 0.04
392 3 0.01
393 53 0.14
394 4 0.01
395 174 0.47
397 1 0.00
398 26 0.07
399 18 0.05
400 4 0.01
401 5 0.01
402 3 0.01
407 1 0.00
408 63 0.17
ACGTcount: A:0.24, C:0.08, G:0.10, T:0.58
Consensus pattern (401 bp):
TGTAGACACCCAATTTGGTCCAGGCCCGGATCAATTGGGCCTGGCCCAAATAGGTAAGTATATGG
TTTTATTTTTATTTTATTTTCGTTTTTATTTTCATTTTTAATTTTAATTTTAATTTTAATTTTAA
TTATTTTAATTTTATTATTATTATTTTATATATATATATATTTTTTATTTTATGCTATTTAGCTA
TTTACTTATTTATTAATATGTATATATCTTTATTATTATTATTATTTTTTGTAATATATTTTTGG
GTTTATCTTATTTTATTTTTTATTATTTTTTTAAATTATCTATTAATTTTATCTGATTTTTTTCC
CGATTATCTGATTAGTATTATTATTTTTTGTTTTCTTTTTTTCATGGCTGTAATTGAAAGTTGAA
GAATCCCATTT
Found at i:21405730 original size:26 final size:26
Alignment explanation
Indices: 21405701--21405753 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21405691 CCGGTCTGAT
* * *
21405701 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21405727 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21405753 C
1 C
21405754 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21409743 original size:877 final size:874
Alignment explanation
Indices: 21403902--21420903 Score: 15287
Period size: 877 Copynumber: 19.1 Consensus size: 874
21403892 GGGCCCTGAC
* * * * * **
21403902 GAAGAAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGCCGTAACCCTCAGTCCAGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* *
21403967 CTGATATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * ** * *
21404032 TCAGTCAGCCAGAGGGACGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCT
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * * *
21404097 GATCCTACT-GCTGCAACCAAT-GGTCCT-GTCCAAACTTAGACTGGGAATGAACTCTGTATGCC
196 GATCCTGCTATC-GCAACC-CTCGGT-CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * *
21404159 TAAGCCAACCAACGCAACGAGCGGGCGGGCGGGC--G-GGCACTACGTCGGCCAAAGAGACGGGA
258 TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGA
* * * *
21404221 TGCGCAAGCCATGGATCGATAGGGTGGTAGGTGAGTTTAGGTACATCTTCATATTTCTGCATGCC
323 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
* *
21404286 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACATGAAGTTTCATG
388 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * *
21404351 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTCAAA-ATTTTGCGGTTCGGGATTTTTTAAA
453 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAA
* * *
21404415 ATTTTTTC-AGATGGAGTTTTGGCCCCAAACTTGATAGACGTGATCCTTGTATTTTTTTTGGCAT
517 ATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
21404479 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGGAAAAAA-TGT
581 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGT
*
21404543 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGG
645 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
21404608 GGGTGTGAGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
710 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * * * **
21404673 ATTGCACATCATGTGCGCAAACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCAATC
775 ATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTC
**
21404738 AGG---T-------T-CTCCGATGATGGTGCCAAGG-
838 AGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * *
21404763 GAAGAAAAATGCGGCACCAGCACATGCTCGAGCCTAGCATGTGCTGCCGCAACCCTCGATCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * *
21404828 CTGATCTTAGACCGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * * *
21404893 TCAGCCGGCCAGAGGGGTGTGATGTGCAAGGCGGGGATCGATCGGGTCCCTCTCTG-GTGCTGTC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* ** * * * *
21404957 GATCCTACTGCCGCAACCCTCGGTCTGATTCAATCTTAGACTGGGAATGAACTTCGTATGCCTAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
21405022 GCCAACCAACGAAACGA----GCGGGCAGGC--G-GGCACTACGCCGGCCAGAGAGACGGGATGC
261 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGC
* * ** * * *
21405080 GCAAGCTGTGGATCGAAAATGTGGTAGGTGGGTTTAGGCTCATCTTCATATTTTTGCATGCCAAT
326 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
* *
21405145 GCCATTTTTATGGCTTCTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
391 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * *
21405210 AGACGACTTGTTTTTTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCGGGATTTTTTAAAATT
456 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAATT
* *
21405275 TTTTCGAAAGGAGTTTTGGCCCCAAACTTTGTAGACGTGACCCTTGTATTTTTGTTGGCATGCAC
520 TTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
** * * *
21405340 AAAAAAATTTGGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATGTAAAAAAAGTGTCCCCA
585 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
21405405 TTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTTG
650 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * *
21405470 TGAGTTCTCAAGGTTTGATGAGTGATAGGGGGCCAATATAAGGGCAAAGTACCAGCACCCATCGC
715 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
21405535 AAATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCAGAACCCCAATACCGCCGGTCGGGTTC
780 ACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTC
*
21405600 TCCGACGATGCTCCGGTGATGGTGCCCCGGT
844 TCCGACGATGCTCCGATGATGGTGCCCCGGT
* **
21405631 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCTACAACCCTCGATCCGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G-
*
21405696 CTGATCTTAGATTGGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTC
59 --G-TC------T-GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * *
21405761 AACCCATGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGAGGGATGCGCAAGCCGGGGATC
105 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
* * * * * * * * * *
21405826 GGCCAGGTCCCTCTCTACATGCTGCCGATCCTGCTATTGCAACCCTTGATCCGGTCTGATCTTAG
170 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAG
* * ** * *
21405891 ATTGGGAATTAACTCCGTATGCCTAAGCCAACTAACGAAACGAGCGGGCAGGCGGGGGGGCGTGC
235 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCG-GC
* *
21405956 ACTACGCCGGCAAGAGAGACGGGATGCGCAAGCCCTGGATCGATAGGGTGGTAGGTGGGTTTAGG
299 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
**
21406021 TGCATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
364 CACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * * * * * *
21406086 TAAGCCTTCACGTTAAGTTTCATGTCAAGATGACTTGTTTTATATTTTTCACGATTTTTGAAGCT
429 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
** * * *
21406151 TTTTGTGGTTCGAGATTTTTGAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGT
494 TTTTACGGTTCG-GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* * * *
21406216 GATCCTTTTATTTTTGTTGGCATGTAAAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTT
558 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
** * *
21406281 TGTGATGATTTGAAAAAAGTGTCCCCA-TTCAAACACGTTAATGGCTACTGGCAGCAAACCTGTA
623 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
21406345 AAATCTCAAATGCACTTTAA-GGGGTGTGAGTTCTCGAGGTTTAATGAGGGATAGGGGGCCAATA
688 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * *
21406409 TAAGGGCCAAGTACCGGCACCCATCGCACATTAAGTGCGCACACCCCCCGGCCCCCCGATCGCCA
753 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCA
* * *
21406474 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGATCC-ATCGATGGTGCCCCGTT
818 GAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGAT-GATGGTGCCCCGGT
* * * * * *
21406531 GAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGTATGTGCTGCCGTAACCCTTGGTCCGAT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * * *
21406596 CTGATCTTAGACTGAGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCAC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * * * ** * *
21406661 TCAACTGGCCAGAGTGGTGGGATGCACAAGCGGAGGATCAATCGGGTCCCTATCTGCGTGTTGTC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * * *
21406726 GATCCTGCTATCGTAACCCTTGGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
21406791 GCCAACTGATGAAACGAGCGGGCGGGTGGGCGGGCGAGCACTATGCCGGCCAGAGAGACGGGATG
261 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCG-GCACTACGCCGGCCAGAGAGACGGGATG
* * * * *
21406856 CGCAAGCCGTGGATCGACAGGGTGGTAGGTGGGTTTAGGCTCATCTTTATATTTTTGTGTGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
21406921 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* ** *
21406986 AAGACTACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCGAGATTTTTTAAAAC
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAAAT
* * * **
21407051 TTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGTGTGCA
519 TTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
21407116 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
584 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
21407181 ATTTCAGACCCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAAGGGGT
649 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * ** *
21407246 GTGAGTTCTGGAGGTTTGATGAGGGATAGGGAGCCAATATAAATGCCAAGTTCCAGCACCCATCG
714 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
21407311 CACATCATGTGTGCACACCCCCCAGCCCTCCCCATCGCCAGAACCCCAATGCCGTCGGTCAGGTT
779 CACATCATGTGCGCACACCCCCCGGCCC-CCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTT
* * * *
21407376 CTCCGGCGATGCTCCTACGATGGTGCCCCGGC
843 CTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * ** *
21407408 GAAGAAAAATGTGGCACCAGCACATGCCTGAGCTCAGCATGTGCTGTGGTAACCCTCAGTCCAGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G-
*
21407473 ACGATCTTAGATTAGGAATGAACTCCGTATGGTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
59 --G-TC------T--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
** * * * * * * * *
21407538 AACTGACGGAACGAGCCTGTGGGGGCTCAACCGGCCGGAGGGGCAGGATGCGCAAGCCGGGGATC
105 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
* * * * * * *
21407603 GGCCGGGTCCCCCTCTACATGCTGCCGATCTTGTTCTCGTAACCCTTC-GTCTGGTCCGATCTTA
170 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCC-TCGGTCTGGTCCGATCTTA
* * * *
21407667 GACTGGGAATCAA-TGCCGTATGCCTAAGCCAACCGACGAAACGAACGGGCAGGTGGGCGGGCGG
234 GACTGGGAATGAACT-CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC-G
*
21407731 GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
297 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * * * *
21407796 GGCACATCTTTATATTTCTACATGCCAATGCCATTTTTATGGCTTGAAAATTCATAGAATGGTCC
362 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
**
21407861 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAA
427 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* *
21407926 CTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGAC
492 CTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * *
21407991 CTGATCCTTGTATTTTTATTGGCATGCACAAAACAATTCAGCTAAAAACTCAAAGTGTAC-AGAT
556 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
21408055 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTG
621 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
21408120 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTATCGAGGTTTAATGAGGGATAGGGGGCCAA
686 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * * * * * *
21408185 TATAAAGGCCAAGTACCAGCACCCGTTGCACATCATGTGTGAACACCCCCCAGCCCCTCCAATCG
751 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCGATCG
** * **
21408250 TC-GAAACCTTAATGCCGCCGGTCAGGTTCT-C--CGA-----C---GATGGTGCCTCGAC
815 TCAG-AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * **
21408299 GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGGAACCCTCGGTCCAGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* *
21408364 CTGATCTTAGATATGCTTAAACATGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
66 CCGATCTTAG--A--C-T-----GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* ** **
21408429 GTGCGGGCGCTCAGTCGGCCAGAGGGGCGAAATGCGCAAGCC-AGCGATAAACCGGGTCCCCCTC
121 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAG-GATCGACCGGGTCCCCCTC
* ** * * ** * *
21408493 TGCATGCTGTTGATCCTACTGTCGCAACCCTCGGTCCAGTCCAATCTTTGACTGGGAATGAACTC
185 TGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTC
* * * * * *
21408558 CGTATGCCTAAGCCAACCGATC-AAATGAGCAGGTGGGCAGACAGGCGGGTGGGCGCTACGCTGG
250 CGTATGCCTAAGCCAACCGA-CGAAACGAGCGGGCGGGC-G---GGCGGG-CGGCACTACGCCGG
* * * * *
21408622 CCAGAGAGACGGGATACGCAAGCCTTGGATCAATTGGGTGGTAGGTGGGTTTAGGTACATCTTCA
309 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
*
21408687 TATTTTTGCGTGCCAATGCCAATTTTT-TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
374 TATTTCTGCGTGCCAATGCC-ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * *
21408751 ACGCGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACAGT
438 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGT
* * * * * *
21408816 GTGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAACCTTGGTAGACGTTATCCTTTT
503 -TCGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * * **
21408881 ATTTTTTTTGGCATGCACAAAAATATTCAGCTAAAAAATTTAAGTGTACAAGATTTTGTGACCAT
567 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
*
21408946 TTGAAAAAAGTGTCCCCA-TTCAGACACGTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
632 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
* * *
21409010 ATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCA
697 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * *
21409075 AGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCGCCCCCGATAGCCAGAACCCC
762 AGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGC-CCCCCGATCGTCAGAACCCC
* * *
21409140 AATGCCGTCGGTTAGGTTCTTCGACGATGCTCCGATGATGGTGCCCCGGT
825 AATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * *
21409190 GAAGAAAAATGTGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTTGGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * * * *
21409255 CCGATCTTAGATTGAGAATGAATTCCGTATGCCTAAGTCAACCCATGAAACGAGCATGCGGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * *
21409320 TCATCCGGCCAGAGGGGTGGGATGCGCAAGCCGAGGATAGGCCGGGTCCCCCTCTGCGTGCTACC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * * * * * * *
21409385 GATCTTGCTATCGTAACCCTCAGTCAGGTCCAATCTTACATTGGGATTGGACTCCGTACGCCTAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
21409450 GCCAACCGTCGAAATGAGCGGGCGGGCGGGCGGGCAGACACTATGTCGGCCAGAGAGACGAGATG
261 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATG
* *
21409515 CGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
*
21409580 TGCCAATTTTT-TTGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
390 TGCC-ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * *
21409644 CAACACAACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTTAAA
454 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAA
*
21409709 TTTTTTCGAAAGGAGTTTTGGCTCCAAACTTGGTAGACGTGATCCATT-TATTTTTGTTGGCATG
518 TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATG
** * * *
21409773 CATGAAAATATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCC
582 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
21409838 CCA-TTCAGACACGTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGG
647 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
21409902 GTGTGAGTTCTCGAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
712 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* ** *
21409967 CGCACATCATGTGTGCACACCCCCCCGGCCCCCTCGATCACCAGAACCCCAATGCCGCCAGTCAG
777 CGCACATCATGTGCGCACA-CCCCCCGGCCCCC-CGATCGTCAGAACCCCAATGCCGCCGGTCAG
21410032 GTTCT-C--CGA-----C-A--ATGGTGCCCCGGT
840 GTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * * *
21410056 GAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGTTGCCGTAACCCTCTGTCCGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * *
21410121 CCAATCTTAGACTGAGAATGAACTCCGTATGACTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * *
21410186 TCATCCGGCAAGAGGGGTGGGATACGCAAGCC-AGGGATAGGCCGGGTCCCCCTCTGCGTGCTAC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGA-GGATCGACCGGGTCCCCCTCTGCGTGCTGC
* * * * * ** *
21410250 CGTTCTTGCTATCGTAACCCTCAGTCAGGTTTGATCTTACACTGGGAATGAACTCCGTATGCCTA
195 CGATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
21410315 AGCCAATCGACGAAATGAGCGGGCGGACGGGCGGGCGGACACTATGCCGACCAGAGAGACAGGAT
260 AGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGG-CACTACGCCGGCCAGAGAGACGGGAT
* *
21410380 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGTCA
324 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
21410445 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
389 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * *
21410510 CAAGACGACTTC-TTTTTTATTTTTCATGATTTTTGAAACATTTTACGGTTCGAGATTTTTTTAA
454 CAAGACGAC-TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG-GATTTTTTAAA
* * ** *
21410574 ATTTTTTC-AGAAGGAGTTTTGGCCCCAAACGTGGTAGACATGATCCTTGTATTTTTGTTCACTT
517 ATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * * * *
21410638 CCACACAAAAATTCATCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGCAAAAAGTGTC
581 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* *
21410703 CTCATTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
646 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
21410768 GGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCA
711 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * *
21410832 TTGGCACATCATGTGCGCACA--------CCCCCCGATGGCCAGAACCCAAATGCCGTCC-GTCA
776 -TCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCAGAACCCCAATGCCG-CCGGTCA
* *
21410888 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCAGT
839 GGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * * * *
21410924 GAAGAAAAATGTGACACCAGCACATGCTCGAGTCTAGCATGTGCTGCCACAACCCTCTGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC-GG-
*
21410989 CCAATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGGACTCCGTATGCCTAAGTC
60 -------T---CT-GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * ** *
21411054 AACCCATGAAACGAGCGTGCGGGCGCTCATCCGGCCAGAGGGATGGGATGCGCAAGCCGGGGATC
105 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
** * * * *
21411119 GACCGGGTCCCCCTCTGCGTGCTATCGATCTTCCTATCGTAACCCTCGAT-TCGG-CCTGATCTT
170 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGTCT-GGTCC-GATCTT
* * * *
21411182 AGACTGGGAATGAAGTCCGTATGCCTAAGCCTACCGACGAAACGAGTGGGCGGACGGGC--G-GG
233 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGG
*
21411244 CACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
298 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
21411309 GCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
363 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
*
21411374 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTC-TTTTTTATTTTTCATGATTTTTGAAA
428 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC-TCGTTTTCTATTTTTCATGATTTTTGAAA
* * * *
21411438 CATTTTACGGTTCAAGATTTTTTTAAATTTTTTC-AGAAGGAGTTTTGGCCCCAAACGTGGTAGA
492 CTTTTTACGGTTC-GGATTTTTTAAAATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * * * * * *
21411502 CATGATCCTTGTATTTTTGTTCGCTTCCACACAAAAATTCATCTAAAACCTTGAAGTGTACAAGA
555 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
21411567 TTTTGTGACCATTTGCAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
620 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* ** *
21411632 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTAAGTTCTCGAACTTTGATAAGGGATAGGGGGCCA
685 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
21411697 ATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTACGCACACCCCCCGGCCCTTCCGATC
750 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-CCCGATC
* * * * * * *
21411762 G-CCGAAACCCTAATGCCGTCGGTCAGGTTCTCCGATGATGCTCTGACGATGGTGCCCCAGT
814 GTCAG-AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * * * * *
21411823 GAAGAAAAATACGACCCCAGCACATGCCCGAGGCCAGCATATGCTACCGCAACCCTCAGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * * *
21411888 CCGATCTTAGATTGGGAATCAACTCCGTATGCCTAAATCAACCCACGAAACGAGCGTGCAGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
*** * * *
21411953 TCATTTGGCCAGAGGGGCGGTATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTGTGTGCTGCC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
*
21412018 GATCTTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * ** * ** **
21412083 GCCAACATTTTTTGATCGGATCGTAGACTGGGAAGTGTACAAGATTTTTTGACCATGTGAAAAAA
261 GCCAAC------CGA-CGAAACG-AG-C-GGG-CG-G-GC--G-------G-GCGGGCGGCACTA
* * * ** * * ** * * * * *
21412148 GTGTCC--CCATTTTAGACACTTTAATGCTTACTGGCAGCAAACCTATAAAATCTAAAATGCTCT
303 -CG-CCGGCCA---GAGAGAC------G-GGA-T-GC-GCAAGCC-GT-GGATC-GATAGGGT-G
* * * * * * * ** * * * * * **
21412211 TTAAGG-GGGTGT--G-A-GTTTTCA-AGGTTTGATGAGGGATAAGGGGCTATTATAAGGGCCAA
349 GT-AGGTGGGTTTAGGCACATCTTCATA--TTT-CTGCGTGCCAA--TGCCATTTTTATGG-CTT
* * ** ** * ** **** * * **
21412270 GTACCAA--CA-CCCATGG-CACATCATGTGCGCACACCCCCCCGACCCCCTGATCGCCGGA--A
407 GTA--AATTCATACAATGGTC-C--C-T-TAAGC-C-TTCACGTGA-AGTTTCATGGCAAGACGA
* *** * ** *** * * * * ****
21412329 CCCCAATGCCGTCAGTCA-GGTTTCTCGACGA-TGCTTTGACGGTGGTGCCCCGG--TGAAGAAA
462 CTCGTTTTCTATTTTTCATGATTT-TTGA-AACT--TTTTACGGT--T----CGGATTTTTTAAA
* **** * * * *** * * * * * * *
21412390 AATACGGC-ACCAGCACATGCCCGAG-CCCAACATGTGCTGCCGCAGCCCTCGGTGC-GGTCCGA
517 ATTTTTTCGA-AAGGA-GT-TTTG-GCCCCAA-A-CT--TG--GTAGACGT-GATCCTTGT---A
* * * * * ***** * *** * * ** **
21412452 TCTTAGACTGGTAATGAAC-TCCGTATGGTTAGACTGGGAA-T-GAACTCCGT--ATGCCTAAGT
568 TTTTTG-TTGG-CATGCACAAAAAAAT--TCAG-CTAAAAACTCGAAGT--GTACAAGATTTTGT
* * * * * * * * *
21412512 CAACCCA--TGAAACGAACGTG-CGGGCGC-TTACCCGGC-C--AAAGGGGTGGGA-TGCGCAAG
626 -GA-CCATTTGAAA--AAAGTGTC---CCCATT-TCAGACACTTTAATGGCT---ACTG-GC-AG
* **** * * ***
21412569 CCAGAGTTCGACCGGGTCCCCCTCTGCATCCTACCGATCCTGTTGCTACAACCCTCGGT-TCG-G
678 -CA-A-----ACC-TGT-AAAATCT-CA----A---ATGCTCTT--T--AA--GGGGGTGT-GAG
** * * **** * * * ** * * **
21412632 -TC-CGATCTTAGACTG-GGAAT-GAACTCCGTATGCCTAA--GCAAACCTGTAAAATCTCAAAT
719 TTCTCGAGGTTTGA-TGAGGGATAGGGGGCC-AAT--ATAAGGGCCAA---GTACCAGCACCCAT
* * * * * *** * ** ****** ** **** *** *
21412691 -GCTCTTTAAGGGGTGTG-AGTTCTCGGGGTTTGATGAGGGAT-AGGGGGCCAATATAAG--GGC
777 CGCAC-ATCA--TGTGCGCACACCCCCCGGCCCCCCGATCG-TCAGAACCCCAAT-GCCGCCGGT
* * * * * * * **
21412751 CAAGTAC-CAGCACCCATCGC-AC-ATCATGTGCGCACACCCCT
837 CAGGTTCTCCG-A-CGAT-GCTCCGATGATG-GTGC-C-CCGGT
* * * * ** * * * * * ** *
21412792 -CAG------GC-CCCCCTATCACCGGAACCCTAATGCCGTCGGTCAAGTTCT-CCAGTGATGCT
1 GAAGAAAAATGCGGCACC-AGCACATG--CCC-GA-GCC--CAG-CATGTGCTGCC-G-CAACCC
* ** ** * * * * *
21412848 TTGG-CGATGGTGCCCCGA-CGAAGA---AAAATGCAGCACCAGGACATGCC---G-GAGCCCA-
56 TCGGTC--TGGT---CCGATCTTAGACTGGGAATG-AACTCC--G-TATGCCTAAGTCAACCCAC
* * * *** * * ** * *
21412903 G-CATGTGC-TGTCACAACCCTCGATCCGGTCC-GATCTTAGACTGGGAAT--G-AACTCCGTAT
112 GAAACGAGCGTG-C-GGGCGCTC-AGCCGG-CCAGA---GGGGC-GGG-ATGCGCAA-GCCG-A-
** * ** *** * * *** * * ** *
21412962 GCTTAGATTGGGAAT-GAACTCT--GT-ATGCCTAAATCAACCCA-CGAAACGAAT--GTGTGGT
165 GGATCGACCGGG--TCCCCCTCTGCGTGCTGCC--GATCCTGCTATCGCAAC-CCTCGGTCTGGT
* ** ** * ** * * * ** *
21413020 GCTC-AGCCGGCCAGAGGGGCGAGTTGCACAAGCCAGGGAT-CAATCAGGTCCCCCTCTACGTGC
225 -C-CGA-TC--TTAGACTGG-GA-ATG-A-ACTCC--GTATGC-CT-AAG-CCAAC-CGAC--G-
* * * ** ** *** * ** ** ** * *
21413083 TACCGATCCTGCTACCGCAACCCTTGGTCCGGTCTGATCTTA-GACTAGTAATGA-ACTCCGTAT
272 AAACGAGCGGGC--GGGC-GGGC--GG-GCGG-C--A-C-TACG-CCGGCCA-GAGAGACGGGAT
*** * *
21413146 GC-CTAAGCCAACCGA-CGAAATAAGGGGACGGGTGGGCACTAGAGATGGG-AT-GCGCA-AGCC
324 GCGC-AAGCC-GTGGATCG--AT------A-GGGT-GG---TAG-G-TGGGTTTAG-GCACA-TC
** * * * * * *** *
21413206 GTGGATCGATAGGGTGATAGGTGGGTTTAGGCACAT-CTTCATATTTCT-GCATACCAATGCCAT
370 -T---TC-ATA---T--T-TCTGCG--T-GCCA-ATGC--CATTTTTATGGCTTGTAAAT-TCA-
*** * * * * * * **
21413269 TTTTATGG--CTTGTAAATTCATACAATGGTC-CCTTAAGCCTTCATGTG-AAGTTTCACGGCAA
416 TACAATGGTCCCT-T-AA-GC---C--T--TCACGTGAAG-TTTCATG-GCAAG----ACGACTC
**** * ** * *
21413330 GACAACTCGTTTTCTATTTTTCATGATTTTCAAAAC-TTTTATGGTTTGGGATTTTTTAAAATTT
465 GTTTTCT-ATTTT-------TCATGATTTTTGAAACTTTTTACGG-TTCGGATTTTTTAAAATTT
* * *
21413394 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGAGATCCTTGTATTTTTATTGGCATGCACA
521 TTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * *
21413459 AAAAAATTTAGCTAAAAACACGAAGTGTACAATATGTTGTGACCATTTGAAAAAAGTGTCCCCAT
586 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
21413524 TTCAGACACTTTAATGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTCTTTAAGAGGGTGT
651 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
21413589 GAGTTCTCGAGGCTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAATACCAGCACCCCTCGCA
716 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * *
21413654 CATCATGTGCGAACACCCCCCGGCCCCCCCGATCATCGGAACCCCAATGCCACCGATCAGGTTCT
781 CATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCT
21413719 CCGACGATGCT-C--TGA--------C---
845 CCGACGATGCTCCGATGATGGTGCCCCGGT
* ** * *
21413735 GAAGAAAAAAGCGGCACCAGCACATGCCCGAAACTAGCATGTGCTGTCGCAACCCTCAGTCCGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G-
**
21413800 CTGATCTTATACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTATATGCCTAAGTC
59 --G------T-CT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * *
21413865 AACCCATGAAACGAGCATGCGGGCGCTCAGCCTGCCAGAGGGGCAGGATGCTCAAGCCGAGGATC
105 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
* * * ** ** * * *
21413930 GATCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTATCATAACCCTTAGTCCGATCTGATCTTAG
170 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAG
* * ** *
21413995 ACTAGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAATGGGCGGGCGGGC--G-GGAA
235 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGCA
* * * **
21414057 CTACGTCGGCCAGAGAGACGGGATGCGCAAGCCCTGGATCGATAGGGTGGCAGGTGGGTTTAGAA
300 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
21414122 ACATCTTCATATTTCTGTGTGCAAATGCCACTTTTATGGCTTGTAAATTCATACAATGG-CCCTT
365 ACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC-T
* **
21414186 TAAGCCTTCACATGAAGTTTCATGGCAAGAATACTCGTTTTCTATTTTTCATGATTTTTGAAACT
429 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * * * * *
21414251 TTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCTAAACCTCGTAGACGT
494 TTTTACGGTTCG-GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
* *
21414316 GATCCTTGTATTTTTGTTGGGATGCACAAAAAAATTCAGCTAAAAACGT-GAAGTGTACAATATT
558 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGTACAAGATT
* *
21414380 TTGTGAGCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGT
622 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
21414444 AAAATCTCAAATGCTCTTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
687 AAAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
*** *
21414509 TATAAGGGCCAAGTACCAGCATGTATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGC
751 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGT
* * * * * * *
21414574 CGGGACCCCAATGCCGCCAGTCAGGTTCTCTGGCGATGCTCCGGTGATGGTGCCCCGAT
816 CAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * *
21414633 GAAGAAAAATACGGCACAAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* *
21414698 CTGATCTTAGACTAGGAATGAACTCCGTATGCCTAGACTGGGAATGAACTTCATATGCATAAGTC
66 CCGATCTTAGACTGGGAATGAACTCCGTATG-C----CT---AA-G----TCA-A--C------C
* * * * * * * *
21414763 AACCCATTAACCGAGCGCGCGGGGGCTCAGCTGGCCAGATGGGCGGGATGTGCAAGCCGAAGATC
109 CA-CGA--AA-CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
** * * * * * * * *
21414828 CTCCAGTTCCCCCTCTGCGTGTTGTCGATCCTACT-GCTGCAACCCTCGATCTGGTCTGATCTTA
170 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATC-GCAACCCTCGGTCTGGTCCGATCTTA
* ** *
21414892 GGCTGGGAATGAACTTTGTATG-CTGAAGCCAACCGACGAAA--A--GAGCGGGCGGGCGGGC--
234 GACTGGGAATGAACTCCGTATGCCT-AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGG
* * * *
21414950 C-CTACGCCGGCCAGAAAGACGGGATGCACAAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAG
298 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
21415014 GCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
363 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * **
21415079 TTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCACAATTTTTGAAAC
428 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * *
21415144 TTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACA
493 TTTTTACGGTTCG-GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACG
*
21415209 TGATCCTTGTATTTTT-TTGTCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
557 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * *
21415273 TTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGACTACTGACAACAAACCTGT
622 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
21415338 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGATAGGGGGCCAAT
687 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * *
21415402 ATAAGGGCCATGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCTGGCCCACCCGATCA
752 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCC-CCCGATCG
* * ** * * * **
21415467 TCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTGACTCGAC
815 TCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * **
21415527 GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCATTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * * * *
21415592 CCAATCCTAGACTGGGAATGAACTCCGTATGGCTAAGTCAACCAACGAAACGAGCGTACGGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * **
21415657 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCAGGTCCCCCACTGAGTGCTATC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * * * *
21415722 GATCCTGCTACCACAACCCTCGGTTTGGTCCAATCTTAGACTGGGAATGAACTCTGTATGTCAAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * *
21415787 GCCAACCAATGAAACGAGCAGGCGGGCGGGCCTGGCGGGCACTACGCCGGACAGAGAGACGGGAT
261 GCCAACCGACGAAACGAGCGGGCGGGCGGG-CGGGC-GGCACTACGCCGGCCAGAGAGACGGGAT
*
21415852 GCGCAAGCCGTGGGTCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
324 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
** *
21415917 ACACTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA-CCTTCACGTGAAGTTTCATGG
389 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* ** * *
21415981 CAAGACGACACGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTCGGGTTTTTTTAAAA
454 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAA
* * * *
21416046 TTTTTTCGGAAGGAGTTTTGGCTCCAAACTTGGTAGACGTGAACCTTGTATTTTTTTTGGCATGC
518 TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * * * *
21416111 ACAAAAAAATTGAGCTAAGAACCCAAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTGTCCC
583 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
21416176 CATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGG
648 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
*
21416241 TGTGACTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
713 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
21416306 GCACATCATGTGCGCAAACCCCCCCTCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCA
778 GCACATCATGTGCGC--ACACCCCC-CGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCA
* *
21416371 AGTTCTCCGGCGATGCTCC----A----G---C---
839 GGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
** *
21416393 GAAGAAAAATGCGGCACCAGCACATGCCCGAAACCAACATGTGCTGCCGCAACCCTCGATCCGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G-
*
21416458 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTC
59 --G----T---CT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* ** * * *
21416523 AACCCACGAAACGAGCGTGCAGGCGCTCAGCCTACCAGAGGGGTGGGATGCGTAAACCGAGGATC
105 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
* * * ** * *
21416588 GACTGGGTCCCCCTCTGCGTGCTACCGATCCTACTGCCGCAACCCTTGGTCTGGTCTGATCTTAG
170 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAG
* * * *
21416653 ATTGGGAATGAACTCCGTATGTCTAAGCCAACCGATGAAACGAGCAGGCGGGCGGGCGGGCGGGC
235 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC-GGC
* * * * * *
21416718 ACTACGCCTGCTAGAGAGACGAGATGCGCAA-CCCTGGATCGATAGGATGGTAGGTGGGTTTAGA
299 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* * *
21416782 AACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATTGTCCCT
364 CACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
** * **
21416847 TAAGCCTTCACGTGAAGTTTCATGGCAAGAATACTGGTTTTCTATTTTTCACAATTTTTGAAACT
429 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * * * * *
21416912 TTTTACGGTCCAGGATTTTTTAAAATATTTTT-GAAAGGA-TTTTCGGCCCCAAAATTTGCAAAA
494 TTTTACGGTTC-GGATTTTTTAAAAT-TTTTTCGAAAGGAGTTTT-GGCCCCAAACTTGGTAGAC
* * * *
21416975 GTGATCCTTGTATTTTTGTTGGCTTGCACAGAAAATTTTAGCTAAAAACTCGAAGTGTACAAGAT
556 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
*
21417040 TTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
621 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
*
21417105 TAAAATCTCAACTGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
686 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
21417170 TATAAGGGCCAAGTACCAGTACCCATCGCACATCATGTGTGCACACCCCCTGGCCCCCCGATCGT
751 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGT
* * * ** * **
21417235 C-GAAACCCCAAAGCCGTCGGTCAGGGTCTCCGACGATGCTCCGACAATGGTGACCCGAC
816 CAG-AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * *
21417294 GAAGAAAAATGTGGCACCAGCACATGGCCGAGCCCAGCATGTGCTGCCACAACCCGCGGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA--C-C---C---T
*
21417359 CCGATCTTAGTCTAGGAATGAATTCCGTATGCTTAGACTGGGAAGGAACTCCGTAT-CGCTAAGT
57 -CG------GTCT--G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGC-CTAAGT
* ** * * ** *
21417423 CAACCAACGAAACGAGCGTGCGGATGCTCAGCCGGCCAAAGGGGCGGGATGCGTAAGTTGGGGAT
104 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
* * ** * * ** ** **
21417488 CAACCAGGTCCCCCTCTATGTGCTGTCGATCCTACTGCCGCAACCCTCAAT-TCGGTTTGATCTT
169 CGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTATCGCAACCCTCGGTCT-GGTCCGATCTT
** * * *
21417552 AGACTGGGAATGAACTTTGTATGCCGAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCCTGGCT
233 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG-CGGGC-
* * *
21417617 TGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTT
296 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
21417682 AGGCACATCTTCATACTTCTGCGTGCCAACGCCATTTTTATGGCTTGTAAATTCATACAATGGGC
361 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
21417747 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTAAA
426 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * *
21417812 ACTTTTTACGGTTCGAGATTTTTTAAAATCTTTTC-AGATGCAGTTTTGGCCCCAATCTTGGTAG
491 ACTTTTTACGGTTCG-GATTTTTTAAAATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAG
* *
21417876 ACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAAGTCGAAGTGTACAGG
554 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * * * * *
21417940 ATTTTGTTACCATTTGCAAAAAGTGTCCCTATTTCAGACACATTAATTGCTGCTGGCAGCAAACC
619 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
21418005 TATAAAATCTCAAGTGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
684 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
21418070 AATATAAGGGCCAAGTACCAGCACCCATCCCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
749 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
* * * * * **
21418135 ATCAGAACCCCAATGTCGTCGGTCAGGTTCTCCGACGATGCTCC-AGCGAAGGTGCCCCGAC
814 GTCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGA-TGATGGTGCCCCGGT
* * * *
21418196 GAACAAAAATGTGGCACCAGCACTTGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * * *
21418261 CCGATCTTAGACTGGGAATGAATTCCTTATGCCTAAGTCAACGCACGAAACGAGCGTGCGGGTGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * *
21418326 TCAACTGGCCAGAGGGGTGGAATGCGCAAGCCGGGGATCGATCGGGTCCCCC-CTGCGTGCTGCC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * ** * *
21418390 GATCCTACTACCACAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * **
21418455 GCTAACCGACGAAATGAACGGGCAGGCGGGCGGGCAGGCATTACACCAACCAGAGAGACGGGATG
261 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATG
* * * *
21418520 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAAATCGTCATATTTCTACATGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
* * * *
21418585 TGCCATTTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTCCACGTTAAGTTTAATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* **
21418650 AAGACGACTTGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAAT
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAAT
* * ** * *
21418715 TTTTTTGGAAGGAGTTTTGATCCCAAACTCGGTAGACATGATCCTTGTATTTTTGTTGGCATGCA
519 TTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
*
21418780 CAAAAAAATTCAGCTAAAAACTCGAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
584 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
21418845 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
649 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
*
21418910 GTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
714 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* *
21418975 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTT
779 CACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTT
* * ** *
21419040 CTTCGACGATGCTCC-ATCAATGGTTACCCGGC
843 CTCCGACGATGCTCCGAT-GATGGTGCCCCGGT
* * **
21419072 GAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTTCTGCCATAACCCTCGGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * *
21419137 CCGATCTTAGACTAGGAATGAACTCTGTATACCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * * * * * * *
21419202 TCAACTGGTCAGAGGGGCAGGATGCGTAAGTCG-GGAAACGGCCGGGTCCCCCTCTGCGTGCTGT
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGG-ATCGACCGGGTCCCCCTCTGCGTGCTGC
* ** ** * * *
21419266 CGATCTTGCTGCCGCAACCCGT-GGTCTGGTATGATCTTAGACTGGGAATGGATTCTGTATGCCT
195 CGATCCTGCTATCGCAACCC-TCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
21419330 AAGCCAACCGAC-AAA--A-CGAGCGGGCGGGC--G-GGCACTACGCCAGCCAGAGAGACGAGAT
259 AAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGAT
* * * * *
21419388 GCACAAGCCGGGGATCGATAGGGTGGAAGGTTGGTTTAGGCACATCTTCATATTTCTGCATGCCA
324 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
21419453 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
389 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * *
21419518 CAAGATGACTTGTTTTCTATTTTTCATGATTTTTCAAACTTTTTACGGTTCGGGATTTTTTAAAA
454 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAA
* **
21419583 TTTTTTCGAAAGGAGTTTTCGTACCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
518 TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
21419648 ACGAAACAATTCAGC-AAATAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGACC
583 ACAAAAAAATTCAGCTAAA-AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
21419712 TCATTTTCAAACACTTTAATGGCTACTGGCGGCAAATCTGTAAAATCTCAAATGCTCTTTAAGGG
647 CCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
21419777 GGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
711 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* ** * *
21419842 TCGCACATCATGT--GCATACCTCCCCGGCCCCCCCGATCACCAGAACCCCAATACTGCCGGTCA
776 TCGCACATCATGTGCGCACACC-CCCCGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCA
* ** * *
21419905 AGTTCTCCGTTGATGCTCCAACGATGGTGCCCCGGT
839 GGTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* ** * ***
21419941 GAAGAAAAATGTGGCACCAGCACATGCTTGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCAAT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* * * * * *
21420006 CCTATTTTATACTGGGAATGAACTCCGTATGCCTATGTCAAACCACGAAACGAGCGTGCGAGCGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * ** * *
21420071 TCAGCCGGCCAGAGGGGCGAGATGCGCAAGGCGAGGATCGGTCGAGTCACCCTCTGCGTGCTGCC
131 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
* * * * *
21420136 GATCCTGCTACCACAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAA
196 GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
21420201 GCCAACCGACAAAACGAGCCGGCGGGCGGGCGGGCAGGCACTACGCTGGCCAGAGAGACGAGATG
261 GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATG
* * *
21420266 CGCAAGCCGTGGATCGATAGGGTGGAAGGTGGGCTTAGGCACATCTTCATATTTCTGCATGCCAA
325 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
*
21420331 TGCCATTTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
390 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* **
21420396 AAAACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCAGGATTTTTTAAAAT
455 AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTAAAAT
* * ** * *
21420461 TTTTTTGGAAGGAGTTTTGGTACCAAACTTGGTAGACATGATCCTTTTATTTTTGTTGGCATGCA
519 TTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
*
21420526 CAAAAAAATTCAGC-AAACAACTCGGAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGACC
584 CAAAAAAATTCAGCTAAA-AACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
21420589 CCATTTTCGGACACTTTAATGGCTACTGGCGGCAAACCTATAAAATCTCAAATGCTCTTTAAGGG
647 CCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
21420654 GGGGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCA-CCA
711 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* ** ** *
21420718 TCGCACATCATGTGCGCCCACCCCCCGGCCCCCCCGATCGTTGGAACCCCAATGCCGTTGATCAG
776 TCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAG
*
21420783 GTTCT-C--CGA-----C---GATGGTGCCCCGAT
840 GTTCTCCGACGATGCTCCGATGATGGTGCCCCGGT
* * * * * *
21420807 GAAGAAAAATGCGACACCAGCACATGCCCGGGCCTAGCATGTGCTGCTGTAACCCTCGGTCCGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
*
21420872 CCGATCTTAGACTGGGAATGAACTTCGTATGC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGC
21420904 TTATATTGGG
Statistics
Matches: 13335, Mismatches: 2059, Indels: 1489
0.79 0.12 0.09
Matches are distributed among these distances:
856 234 0.02
857 302 0.02
858 9 0.00
859 4 0.00
860 75 0.01
861 166 0.01
865 17 0.00
866 736 0.06
867 159 0.01
868 243 0.02
869 619 0.05
870 146 0.01
871 4 0.00
872 40 0.00
873 201 0.02
874 796 0.06
875 515 0.04
876 553 0.04
877 1444 0.11
878 77 0.01
879 426 0.03
880 139 0.01
881 192 0.01
882 9 0.00
883 11 0.00
884 132 0.01
885 227 0.02
886 14 0.00
887 56 0.00
888 5 0.00
889 12 0.00
890 583 0.04
891 498 0.04
892 261 0.02
893 102 0.01
894 763 0.06
895 84 0.01
896 17 0.00
897 13 0.00
898 180 0.01
899 119 0.01
900 115 0.01
901 345 0.03
902 618 0.05
903 1008 0.08
904 14 0.00
905 13 0.00
906 13 0.00
907 3 0.00
908 4 0.00
909 1 0.00
910 4 0.00
911 4 0.00
912 11 0.00
913 6 0.00
914 8 0.00
915 5 0.00
916 24 0.00
917 11 0.00
918 1 0.00
919 3 0.00
920 13 0.00
921 15 0.00
922 9 0.00
923 15 0.00
925 3 0.00
926 14 0.00
927 2 0.00
928 7 0.00
929 3 0.00
932 2 0.00
933 2 0.00
934 11 0.00
935 21 0.00
936 3 0.00
937 6 0.00
938 4 0.00
939 16 0.00
940 12 0.00
941 13 0.00
942 6 0.00
943 16 0.00
944 6 0.00
945 2 0.00
946 5 0.00
947 3 0.00
948 4 0.00
949 6 0.00
950 8 0.00
951 7 0.00
952 4 0.00
953 6 0.00
954 4 0.00
955 4 0.00
956 1 0.00
957 10 0.00
958 11 0.00
959 27 0.00
960 17 0.00
961 23 0.00
962 31 0.00
963 28 0.00
964 42 0.00
965 33 0.00
966 25 0.00
967 35 0.00
968 37 0.00
969 26 0.00
970 25 0.00
971 12 0.00
972 7 0.00
973 26 0.00
974 27 0.00
975 28 0.00
976 5 0.00
977 10 0.00
978 3 0.00
979 5 0.00
980 5 0.00
981 7 0.00
982 8 0.00
983 12 0.00
984 8 0.00
985 20 0.00
986 16 0.00
987 21 0.00
988 9 0.00
989 8 0.00
990 7 0.00
991 9 0.00
992 14 0.00
993 2 0.00
994 2 0.00
996 2 0.00
997 2 0.00
998 11 0.00
999 3 0.00
1000 10 0.00
1002 1 0.00
1003 6 0.00
1004 1 0.00
1005 1 0.00
1006 6 0.00
1007 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (874 bp):
GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCC
GATCCTGCTATCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
GCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGC
GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT
GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGATTTTTTAAAATTT
TTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
CATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCAGAACCCCAATGCCGCCGGTCAGGTTCTC
CGACGATGCTCCGATGATGGTGCCCCGGT
Found at i:21411023 original size:26 final size:26
Alignment explanation
Indices: 21410994--21411046 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21410984 CTGGTCCAAT
*
21410994 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21411020 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21411046 C
1 C
21411047 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21412483 original size:26 final size:26
Alignment explanation
Indices: 21412454--21412504 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
21412444 CGGTCCGATC
*
21412454 TTAGACTGGTAATGAACTCCGTATGG
1 TTAGACTGGGAATGAACTCCGTATGG
21412480 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
21412505 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGG
Found at i:21412966 original size:26 final size:26
Alignment explanation
Indices: 21412937--21412989 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21412927 CCGGTCCGAT
21412937 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
21412963 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21412989 C
1 C
21412990 CTAAATCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21413856 original size:26 final size:26
Alignment explanation
Indices: 21413805--21413857 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21413795 CCGGTCTGAT
* *
21413805 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21413831 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
21413857 C
1 C
21413858 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21414754 original size:26 final size:26
Alignment explanation
Indices: 21414705--21414755 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
21414695 GGTCTGATCT
*
21414705 TAGACTAGGAATGAACTCCGTATGCC
1 TAGACTAGGAATGAACTCCATATGCC
* *
21414731 TAGACTGGGAATGAACTTCATATGC
1 TAGACTAGGAATGAACTCCATATGC
21414756 ATAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.20, G:0.24, T:0.25
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCATATGCC
Found at i:21416492 original size:26 final size:26
Alignment explanation
Indices: 21416463--21416515 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21416453 CCGGTCTGAT
21416463 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21416489 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21416515 C
1 C
21416516 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21417393 original size:26 final size:27
Alignment explanation
Indices: 21417364--21417423 Score: 68
Period size: 26 Copynumber: 2.3 Consensus size: 27
21417354 CTGGTCCGAT
* *
21417364 CTTAGTCTAGGAATGAATTCCGTAT-G
1 CTTAGTCTAGGAAGGAACTCCGTATCG
* *
21417390 CTTAGACTGGGAAGGAACTCCGTATCG
1 CTTAGTCTAGGAAGGAACTCCGTATCG
*
21417417 CTAAGTC
1 CTTAGTC
21417424 AACCAACGAA
Statistics
Matches: 27, Mismatches: 6, Indels: 1
0.79 0.18 0.03
Matches are distributed among these distances:
26 21 0.78
27 6 0.22
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.28
Consensus pattern (27 bp):
CTTAGTCTAGGAAGGAACTCCGTATCG
Found at i:21423412 original size:26 final size:26
Alignment explanation
Indices: 21423376--21423425 Score: 66
Period size: 26 Copynumber: 1.9 Consensus size: 26
21423366 GTCCGATCTT
*
21423376 AGACTGGGAATGAACT-TCGTATGCTC
1 AGACTAGGAATGAACTCT-GTATGCTC
*
21423402 AGACTAGGAATTAACTCTGTATGC
1 AGACTAGGAATGAACTCTGTATGC
21423426 CAAAGTCATC
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
26 20 0.95
27 1 0.05
ACGTcount: A:0.30, C:0.18, G:0.24, T:0.28
Consensus pattern (26 bp):
AGACTAGGAATGAACTCTGTATGCTC
Found at i:21423524 original size:26 final size:26
Alignment explanation
Indices: 21423495--21423553 Score: 118
Period size: 26 Copynumber: 2.3 Consensus size: 26
21423485 CAAGCTGGGG
21423495 ATCGATCGGGTCCCTCTCTGCGTGCT
1 ATCGATCGGGTCCCTCTCTGCGTGCT
21423521 ATCGATCGGGTCCCTCTCTGCGTGCT
1 ATCGATCGGGTCCCTCTCTGCGTGCT
21423547 ATCGATC
1 ATCGATC
21423554 CTGCTGTCGC
Statistics
Matches: 33, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 33 1.00
ACGTcount: A:0.10, C:0.34, G:0.25, T:0.31
Consensus pattern (26 bp):
ATCGATCGGGTCCCTCTCTGCGTGCT
Found at i:21425198 original size:26 final size:26
Alignment explanation
Indices: 21425156--21425208 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21425146 TCGATCCGAT
* *
21425156 CTTAGACTGCGAGTGAACTCTGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
*
21425182 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
21425208 C
1 C
21425209 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.21, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:21425498 original size:887 final size:889
Alignment explanation
Indices: 21420910--21426080 Score: 6328
Period size: 870 Copynumber: 5.8 Consensus size: 889
21420900 ATGCTTATAT
* * * *
21420910 TGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCAGGAGGGC--G-A-GAC-
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * *
21420970 CTA-CCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATC
66 CCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* *
21421034 TTCATATTTCTATGTGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCC
131 TTCATATTTCTACGTGCCAATGCCA-TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
21421099 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCACGATTTTTGAAACTTTTTAC
195 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC
*
21421164 GGTTCGGGA-TTTTCAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
260 GGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * *
21421228 TGTACTTTTGTTGGCATGCACAAAAAAGTTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGAC
325 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
*
21421293 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCT
390 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
21421358 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
455 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
21421423 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCAT-CGGAACC
520 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC-TCCGGAACC
* * * ** * * *
21421487 CCAATGCCGTTGATCAGGTTCTCCAACGATGCTTCGGCGATGGCACCCCGATGAACAAAAATGCG
584 CCAATGCCGTCGGTCAGGTTCT-C--C-ATGC-GC-GCGATGGTGCCTCGATGAAGAAAAATTCG
* * * *
21421552 ACACCAGCACATGACCGAGCCCAGCATGTGCTACCATAA-C-C---C--T-CGA---T---CT--
643 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCTCGGTCTGTCCGATCTTAGACTGG
* *
21421601 G---G---TCTG-AT-CTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCAATGAAACGAG
708 GAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAG
*
21421658 CATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCTG-GGATCGGTCGGGTCCGCCT
773 CATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC-GCGGATCGGTCGGGTCCCCCT
* * * * * * * *
21421722 TTGTGTGCTGCCGATCCTACTGCCACAACCCTCTGTCTGGTCTGATCATAGAC
837 CTATGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
**
21421775 TGGGAATGAACTCCGTATGCCTAAGCCAACCGTTGAATTGA-GCAGGCGGGCGGGCGGGCGAGCG
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA---ACG-A-GCGGGCGGGC--G-G-GCG
** * * *
21421839 GGCACTACGCCAGCCAGAGAGACGGGATGCATAAGCCGTGGATCGATAGAGTGGCAGGTGTGTTT
57 GGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
21421904 AGGCACATCTTCATATTTCT-CTGTACCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
122 AGGCACATCTTCATATTTCTAC-GTGCCAATGCCA-TTTTATGGCTTGTAAATTCATACAATGGT
* *
21421968 CCCTCAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTCTGA
185 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * * *
21422033 AACTTTTTACGGTTCGGGATTTTCTAAAATTTTTTCAGAAGGTGTTTTGGCCCCAAATTTGGTGG
250 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * *
21422098 ATGTGATCCTTGTATTTTTGTTGGCAT-AAGCAAAAAAATTCAGCTAAAAACTGGAAGTTTACAA
315 ACGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
21422162 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAAC
379 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
21422227 CTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
444 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * *
21422291 CAATATAAAGGCCAAGTGCCAGTACCCATCGCACAACATGTGCGCACACCCCCCCGGCCCCCCCG
509 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCG
* * * * * *
21422356 ATCACCGGATCCCCAATGCTGTCGGTCAGGTTCTTCGGCAATGCTCCGACGATGGTGCCACGGTG
572 ATCTCCGGAACCCCAATGCCGTCGGTCAGGTTC-TC--C-ATGC-GCG-CGATGGTGCCTCGATG
* * * ** *
21422421 AAGAAAAATTTGGCACCAGCACATGCCCGAGCCCAGCTTGTGGTAACATAAGCCTCGGTCTGATC
631 AAGAAAAATTCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CCTCGGTCTG-TC
* * *
21422486 CGATCTTAAACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCA
694 CGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * *
21422551 ACCCACGAAATGAGCAAGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCGGGGATCG
759 ACCAACGAAACGAGCATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGCGGATCG
* * * * * *
21422616 GTCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGTAACCCTCAGTCCAGTCTGATTTTAGA
824 GTCGGGTCCCCCTCTATGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGA
21422681 C
889 C
* * ** * * *
21422682 TAGGAATGAATTTTGTATGCTTAAGCAAACCGACGAAACGA--------GCGAGCGGGCACTACG
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
*
21422739 CCAGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
66 CCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* *
21422804 TTCATA-TT-T-C-TG-C-ATGCCATTCTTGTGGCTTGTAAATTCATACAATGGTCACTTAAGCC
131 TTCATATTTCTACGTGCCAATGCCATT-TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
21422863 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC
195 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC
* * * *
21422928 GGTTTGGGATTTTTTAAAATTTCTTCGGAAGGAGTTTTGGCCCCAAACTTGGAAGACGTGATCCT
260 GGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * *
21422993 TGTATTTTTTTTTGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
325 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* * *
21423058 CATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAACAAATCTGTAAAATCT
390 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
21423123 CAAATGCTCTTTAAGGGGGCGTGAGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
455 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * * *
21423188 CCAAGTACCAGCACCCATCGCACATCAAGTGCGCATACCCCCCGG-CCCCCGATCACTGGAACTC
520 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCTCCGGAACCC
* * *
21423252 CAATGCCGCCGGTTAGGTTCTCCTGCGATGCTCCGGCGATGGTGCC-CTGATGAAGAAAAATGT-
585 CAATGCCGTCGGTCAGGTTCT-C--C-ATGC-GC-GCGATGGTGCCTC-GATGAAGAAAAAT-TC
* * ** *
21423315 GTCACGAGCACATGCTAGAGCCCAGCATGTGCTGCCACAATGCTCGGTCTGGTCCGATCTTAGAC
642 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CCTCGGTCT-GTCCGATCTTAGAC
* * * * * * * *
21423380 TGGGAATGAACT-TCGTATGCTCAGACTAGGAATTAACTCTGTATGCCAAAGTCATCCCACGGAA
705 TGGGAATGAACTCT-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAA
* * * * * *
21423444 CGAGCGTGCGAGTGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCTGGGGATCGATCGGGTCCC
769 CGAGCATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGCGGATCGGTCGGGT-CC
**
21423509 TCTCTGCGTGCTATCGATCGGGTCCCTCTCTGCGTGCTATCGATCCTGCTGTCGCAACCCTCAGT
833 -C-C--C-T-C--T--AT---G--------TGC-TGC---CGATCCTGCTACCGCAACCCTCAGT
* * *
21423574 CTGGTCTGATCCTAGAG
873 CCGGTCTGATCTTAGAC
*
21423591 TGGGAATGAACTCCGTATGCCTAAGCCAATCC-ACGAAACGAGCGGGCGAGCGGGCGGGCACTAC
1 TGGGAATGAACTCCGTATGCCTAAGCCAA-CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTAC
*
21423655 GCCAGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
65 GCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
21423720 CTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTCAAGC
130 CTTCATATTTCTACGTGCCAATGCCA-TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* *
21423785 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTCTTTG
194 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
* * ** *
21423850 CAGTTCAGGA-TTTTTAAAATTTTTTCAG-AGGACATTTGGCCCCAAACTCGGTAGACGTGATCC
259 CGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
21423913 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
324 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
*
21423978 CCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
389 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* *
21424043 TCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGCTTGATGAGGGAT-GGAGGGCCAATATAAG
454 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG-GGGCCAATATAAG
* * * * *
21424107 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCAGCCCCCCCGATCGCCTGAAC
518 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCTCCGGAAC
* * * * *
21424172 CCCAATGTCGTCGGTCGGGTTCTCCGGTGATGCTCCGACGATGGTGCCTCGGTGAAGAAAAATGC
583 CCCAATGCCGTCGGTCAGGTTCTCC----ATGC-GCG-CGATGGTGCCTCGATGAAGAAAAATTC
* *
21424237 GGCACCAGCACATGCTCGAGACCAGCATGTGCTGCCACAA-C-C---C--T-CGATC-----C--
642 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCTCGGTCTGTCCGATCTTAGACTG
* *
21424287 -G-AT---C-C-G-AT-CTTAGACTGGTAATGAACTCTGTATGCCTAAGTCAACTC-ACGAAACG
707 GGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC-CAACGAAACG
* * * * * *
21424342 AGCGTGCGGGTGCTCAGTCGACCAGAGGGGAGGGATGCACAAGCCGAC-GATCGGCCGGGTCCCC
771 AGCATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG-CGGATCGGTCGGGTCCCC
* ** * * *
21424406 TTCTGCGTGCTGCCAATCTTGCTACCGTAACCCT-AGGTCCGGTCTGATCTTAGAC
835 CTCTATGTGCTGCCGATCCTGCTACCGCAACCCTCA-GTCCGGTCTGATCTTAGAC
* * * *
21424461 TGGGAATGAACTCCGTATGCCTAAGCAAACTGATGAAACGAGCGGGCAGGCGGGCGGGCACTACG
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * *
21424526 CCGGCCAGAGAGACGGGATACGCAAGCCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
66 CCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * *
21424591 TTCATCTTTCTATGTGCCAATGCCA-TTTATGGCTTGTAAATTCATACAATGGTCCCTTAACCCT
131 TTCATATTTCTACGTGCCAATGCCATTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * *
21424655 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCCATTTTTCATGA-TTTTCAAAGCTTTTTGC
196 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA-CTTTTTAC
* ** * **
21424719 GGTTCGGGATTTTTTGAAATTTTTTTGGAAGGATTTTTTACCCCAAACTTGGTAGACGTGATCCT
260 GGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * * * *
21424784 TGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAACTGTAGAAGATTTTGTAAC
325 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* * *
21424849 CAATTGAAAAAAGTGTCCCAATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
390 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * * *
21424914 CAAATGCTCTTTAAGGGGGTTTGAGTTCTCAAGGTTTGATGAGGGACAGAGGGCCAATATAAGGG
455 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
*
21424979 CCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCTCCCTGGCCCCCCGATCTCCGGAAC
520 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCC-GGCCCCCCGATCTCCGGAAC
* *
21425044 CCCAATGTCGTCGGTCAGGTTCT-C-TG-G-G-GATGGTGCCTCGACGAAGAAAAATTCGGCACC
583 CCCAATGCCGTCGGTCAGGTTCTCCATGCGCGCGATGGTGCCTCGATGAAGAAAAATTCGGCACC
** ** *
21425104 AGCACATGCCCGAGTGCAGCATGTGCTGCCGTAACCCTCGGT-TCGATCCGATCTTAGACTGCGA
648 AGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CCTCGGTCT-G-TCCGATCTTAGACTGGGA
* * *
21425168 GTGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAATGAAACTAGCA
710 ATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCA
* ** * * * *
21425233 TGCAGACGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGCGGATCAGCCAGGTCCCCCTCTA
775 TGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGCGGATCGGTCGGGTCCCCCTCTA
* *
21425298 TGTGCTGCCGATCTTGCTACTGCAACCCTCAGTCCGGTCTGATCTTAGAC
840 TGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
* *
21425348 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCTGACGGGCGGGCGGGCACTACG
1 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * * *
21425413 TCGGCCAGAGAAACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
66 CCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* *
21425478 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
131 TTCATATTTCTACGTGCCAATGCCA-TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * ** *
21425543 TTCACATGAAGTTTCATGGCAAGACGACTCATTTTCTATTTCTCACAATTTTGGAAACTTTTTAC
195 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC
** *
21425608 GGTTCGAAATTTTTTAAAATTTTTTC-GAAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCC
260 GGTTCGGGATTTTTTAAAATTTTTTCAG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* *
21425672 TTGAATTTTTGTTGGCATGCACAAAAAACA-TCAGCTAAAAACTCGAAGTGTACAAGATTTTTTG
324 TTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
21425736 ACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAAT
388 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* *
21425801 CTCAAATGCGCTTTAAGGGGGTGTGAGTTCTTGAGGTTT-ATGAGGGATAGGGGGCCAATATAAG
453 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
21425865 GGCCAAGTACCGGCACCCATCGCACATCATGCGTGCACACCCCCCGGCCCCCCCGATCGT-CGGA
518 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATC-TCCGGA
* * *
21425929 ACCCCAATGCCGTCGATCAGGTTCTCTGACAATGCTCCGACGATGGTGCCTCGACGAAGAAAAAT
581 ACCCCAATGCCGTCGGTCAGGTTCTC---C-ATGC-GCG-CGATGGTGCCTCGATGAAGAAAAAT
** *
21425994 GT-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAATCCTCGGTCTGGTCTGATCTTA
640 -TCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CCTCGGTCT-GTCCGATCTTA
*
21426058 GACTGGGAATGAACTCCGTATGC
702 GACTGGGAATGAACTCTGTATGC
21426081 CTAAGCCAAC
Statistics
Matches: 3731, Mismatches: 404, Indels: 309
0.84 0.09 0.07
Matches are distributed among these distances:
861 58 0.02
863 2 0.00
864 1 0.00
865 36 0.01
866 2 0.00
867 8 0.00
868 99 0.03
869 25 0.01
870 423 0.11
871 10 0.00
872 40 0.01
873 5 0.00
874 3 0.00
875 1 0.00
876 2 0.00
877 2 0.00
878 2 0.00
879 270 0.07
880 194 0.05
881 97 0.03
882 4 0.00
883 224 0.06
884 9 0.00
885 302 0.08
886 88 0.02
887 322 0.09
888 65 0.02
889 294 0.08
890 12 0.00
891 81 0.02
892 1 0.00
893 4 0.00
894 3 0.00
895 4 0.00
896 88 0.02
897 6 0.00
898 97 0.03
899 4 0.00
900 1 0.00
902 1 0.00
903 2 0.00
904 3 0.00
905 7 0.00
906 5 0.00
907 172 0.05
909 67 0.02
910 2 0.00
912 5 0.00
913 1 0.00
916 1 0.00
917 84 0.02
918 2 0.00
919 3 0.00
920 3 0.00
921 257 0.07
922 115 0.03
923 110 0.03
924 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (889 bp):
TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
CCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
TTCATATTTCTACGTGCCAATGCCATTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACG
GTTCGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCTCCGGAACCCC
AATGCCGTCGGTCAGGTTCTCCATGCGCGCGATGGTGCCTCGATGAAGAAAAATTCGGCACCAGC
ACATGCCCGAGCCCAGCATGTGCTGCCACAACCTCGGTCTGTCCGATCTTAGACTGGGAATGAAC
TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCATGCGGG
TGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGCGGATCGGTCGGGTCCCCCTCTATGTGCT
GCCGATCCTGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGAC
Found at i:21426789 original size:26 final size:26
Alignment explanation
Indices: 21426760--21426812 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21426750 CCGATCTAAT
*
21426760 CTTAGACTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21426786 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21426812 C
1 C
21426813 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21427691 original size:26 final size:26
Alignment explanation
Indices: 21427662--21427714 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21427652 CCGGTCTGAT
* *
21427662 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCAGTATG
21427688 CTTAGACTAGGAATGAACTCAGTATG
1 CTTAGACTAGGAATGAACTCAGTATG
21427714 C
1 C
21427715 CTAAGTGAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCAGTATG
Found at i:21428593 original size:26 final size:26
Alignment explanation
Indices: 21428564--21428616 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21428554 CCGGTCCGAT
21428564 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21428590 CTTAGACTGGGAATGAACTGCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21428616 C
1 C
21428617 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21429488 original size:26 final size:26
Alignment explanation
Indices: 21429459--21429511 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21429449 CCGGTCCGAT
*
21429459 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21429485 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21429511 C
1 C
21429512 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21431280 original size:26 final size:26
Alignment explanation
Indices: 21431229--21431281 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21431219 CTGGTTCGAT
*
21431229 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21431255 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
21431281 C
1 C
21431282 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21431746 original size:894 final size:895
Alignment explanation
Indices: 21426032--21443524 Score: 20645
Period size: 895 Copynumber: 19.7 Consensus size: 895
21426022 ATGTGCTGCT
* *
21426032 GCAATCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-
** * *
21426097 AATGAGCGAGTGGGCAGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
65 AA--A-C-A---AACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * * *
21426162 ATCGATTGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTATGTGCCAATGTCATTTTTAT
123 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTAT
** * * *
21426227 GGCTTGTAAATTTGTACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAGATGACTCAT
188 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* *
21426292 TTTCTATTTTTCACGATTTTGGAAACTTTTTACGGCTCGAGATTTTTTAAAATTTTTTCGAAAGG
253 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* * * * * * *
21426357 AGTTTTGGCCACAAACCTAGTAGACATGATCCTTGTATTTTTTTTCGCATGCACAAAAAAATTAA
318 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* * * *
21426422 GCGAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCATACGCT
383 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
21426487 TTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTTTCGA
448 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
21426552 GGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
513 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * * *
21426616 GCACACCCCCCGGCCCCTCCGATCGCCGTAACCCTAATGCCACCAGTAAGGTTCTCC----A--A
578 GCACCCCCCCCGGCCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGC
* * * *
21426675 T----GATGGTGCCCCAGCGAAGAAAAATAT-GGCACCAGCACATGCCAGAGCCTAGCATGTGCT
642 TCCGCGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * * *
21426735 GTCGCAACCCTCAGTCC-GATCTAATCTTAGACTGGGAGTGAACTCCGTATGCTTAGACTGGGAA
707 GCCGCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* ** * *
21426799 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCAAGCGCTCAGCCGACCAGAAGGGC
771 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* * * * * * *
21426864 GAGATGCGCAAGCCGGGGATCGG-TTGGGT-GCCCTTTCCATGCTGTCGATCCTGCTACC
836 GGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * **
21426922 GCAACCCTCTGTCCGGTCTGACCTTAAACTGGGAATGAACGCCGTATGCCTAAGCCAACAAACGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
21426987 AACGAGCGGGTAGGCGGGCAGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCG-AG
66 AAC-A------A-ACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
21427051 ATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTAT
123 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTAT
* *
21427116 GGCTTGTGAATTCATACGATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
188 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
21427181 TTTCTATTTTTCAAGATTTTTGAAACTTTTTACTGTTCGGGATTTTTTAAAATTTTTTTGAAAGG
253 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* * * * *
21427246 ATTTTTGGGCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAATTTA
318 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
21427311 GCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACT
383 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
21427376 TTAATGGCTACTGGCGGCAAATCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
448 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
21427441 GGTTTGATGAGGGATACGGGGCCAATATAAGGGCCCAGTACCAGCATCCATCGCACATCATGTGC
513 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * *
21427506 GCACACCCCCCCGGCACCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGTGATG
578 GCAC-CCCCCCCGGC-CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATG
* * *
21427571 CTCCAACGATGGTGCCCCGACGAAGAAAAATCT-GGCACCAGCACATGCCCGAGCCCAGCATGTG
641 CTCC-GCGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
21427635 CTGTCGTAACCCTCGGTCCGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGG
705 CTGCCGCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * *
21427699 AATGAACTCAGTATGCCTAAGTGAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGCCAGAAGG
769 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * ** * * *
21427764 GCAGGATGCGCAAGCTGGGGATCGG-TCGGGTCCCCCTCTGCGTTTTGCCAATCCTACTGCC
834 GCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * * * * *
21427825 GTAACCCTGGGTCCAGTCCGATCTTAGATTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGT
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * *
21427890 AACGAACGGGCGGGCGGGTGGGCAGGTGCTACGCCAGCCAGAGAGACGGGATGCACAAGCCGTGG
66 AACAAACGGGCGGGC----GGGCA----CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
21427955 ATGGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATA-TGCCAATGCCATTTTTA
123 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-AGTGCCAATGCCATTTTTA
* *
21428019 TGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACACG
187 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * ** * * * *
21428084 TTTTCTATTTTTCA-AAATTTTGAAACTATTTGTGCTTTGAGATTTTTTAAAATTTTTTCAAAAA
252 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAG
* * * *
21428148 GAGTTTTGGCCCCAAACTTGGTTGACGTGATCCTTGTATTTTTTTTGGCACGCACAAAAAAATTT
317 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * *
21428213 AGCTAAAAAGTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACAC
382 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * * *
21428278 TTTAATGGCTATTGGCAGCAAACATGTAAAATCTCAAATGCTCTTTAATGGGGTGTGAGTTCTTG
447 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* ** *
21428343 AGGTTTCACCAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTG
512 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * *
21428408 CGTAGACCCCCCAGG-CCCCCGATCGCCGGAACCCCAATGTCGCCGGTCAGGTTCTCCGGCGATG
577 CGCA-CCCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATG
* * *
21428472 CTCCGGCGATGGTGCTCCGACGAAGAAAAA--TACGGCACCAGGACATGCCCTGAGCCCAGCATG
641 CTCC-GCGATGGTGCCCCGGCGAAGAAAAATGTA-GGCACCAGCACATGCCC-GAGCCCAGCATG
* * * *
21428535 TGCTACTGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
703 TGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * ** *
21428600 GAATGAACTGCGTATGCCTAAGTCAACCCACGAAACGAGCGGGCGGGTGCTCAGCATGCTAGAGG
768 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * * *
21428665 GGCAGGG-TGCGCAAGCCGGGGATC-GATCGGGTCCCTCTCAGTGTGCTACCGATCCTACTACC
833 GGC-GGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * *
21428727 ACAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * *
21428792 AACGAACGGGTGGCCGGGCAGGCGGGCACTATGCCGACCAGAGAGACGGGATGCACAAACCTTGG
66 AACAAAC--G-GG-C--G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
21428857 ATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA-TGCCAATGCCATTTTTA
123 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-AAGTGCCAATGCCATTTTTA
*
21428921 TGGCTTGTAAATTCATACAATGG-CCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACAC
187 TGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * *
21428985 GTTTTTTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC-AGGATTTTTTAAAATTATTTT-GG
251 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATT-TTTTCGA
* * *
21429048 AAGGAGTTTTGGCCCCAAACTTGGAAGACGTGATCCTTGTATTTTTTTTGGAATGCACAAAAAAA
314 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
21429113 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAAA
379 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21429178 CACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG-T-
444 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
21429241 TC------T--TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
509 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
21429298 GTGCGCACAGCCCCCCCGACCCCCCGATCACCGAAACCCCAATGCCGTCGGTCAGGTTCTCC-GT
574 GTGCGCAC--CCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
* * * * * *
21429362 CGATGCTCTGACGATGGTGACCCGACGAAGAAAAATG-CGGCACCAGCACATG-CTGAAGCCTAG
637 -GATGCTCCG-CGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCG-AGCCCAG
* * *
21429425 CATGTGCTGCCACAAACCCTCGGTCCGGTCCGATCTTAGGCTGGGAATGAACTCCGTATGCTTAG
699 CATGTGCTGCCGC-AACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* *
21429490 ATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCC
763 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* ** * * *
21429555 AAAAAGGCGGGATGCGCAAGCCGGGGATCGG-TCGGGTCCCCCTCTACGTGCTGCCAATTCTGCT
828 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
21429619 ACC
893 ACC
* * *
21429622 GCAACCCTTGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACTA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
21429687 AACAAGCGGACTGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
66 AACAA----A----CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * * ** *
21429752 ATCGATTGGGTGGAAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGTCATTTTTAT
123 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTAT
*
21429817 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGT
188 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * ** * * * *
21429882 TTTCCATTTTTTACGCTTTTCAAAAC-TTTTCCAGTTC-ATGATTTTTTAAAATTTTTTAGGAAG
253 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGAAAG
* * *
21429945 TAGTTTTGCCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
317 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * * * *
21430010 GGCTAAAAATTTGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTGAAACAC
382 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
21430075 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTGAGTTCTCA
447 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * *
21430140 AGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTA
512 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * **
21430205 CGCACACCACCCCGGCCCCCTGATCGCCGGAACCCCAATACCGCCAGTCAGGTTCTCCGACGATG
577 CGCAC-CCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATG
** * * *
21430270 CTCCAGCGATGGTGCCCCGATGAAGAAAAATG-CGGAACCAGCACATGCCCGAACCCAGCATGTG
641 CTCC-GCGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * *
21430334 CTGTCGTAACCCTCAGTCCAG-TCTGATCTTAGACTGGGAATGAA---C-T-T-C---G--T---
705 CTGCCGCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * *
21430384 -AT--A------A---CTAAGTCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGGCCAAAGTG
769 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * * *
21430437 GCGGGATGCGCAAGCCGGGGATC-GATCGGTTCCCCCTCTGCGTGCTACCGATCCTGCTGCC
834 GCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* ** *
21430498 ACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACCGATGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * *
21430563 AACGAGCGGCCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCCTGGATCGATAG
66 AACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
*
21430628 GGTGGTAGGTGGGTTTAGGCACATCTTCACATTTCTAAGTGCCAATGCCATTTTTATGGCTTGTA
131 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGTA
* *
21430693 AATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATT
196 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * *
21430758 TTTCACGATTTTTGAAACTTTTTGCGATTCGAGATTTTTTACAATTTTTTCGAAAGGAGTTTTTG
261 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
*
21430823 CCCCAAACTTGGTAGACATGATCCTTGTA-TTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAA
326 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
21430886 CCCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCTATTTCAGACACTTTAATGGC
391 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
** *
21430951 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTTTGTTCTGGAGGTTTGAT
456 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
21431016 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACGCCC
521 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-CCC
* * * *
21431081 CCCCGGGCCCCCTGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGATGCTCCAGCG
585 CCCC-GGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCC-GCG
* *
21431146 ATGGTGCCCCGGTGAAGAAAAATGTAGG-ACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCA
648 ATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * *
21431210 ACCTTTGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
713 ACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
** * *
21431275 TATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCGGAGGGGCGGGATGC
778 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * **
21431340 GCAAGCCAGGGATCGGCT-GGTTCCCCCTCTGCGTGCTACCGAT-TTGGCTGTC
843 GCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCT-GCTACC
* * * * *
21431392 GCAACCCTCGATCTGGTTTGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCATCC-AGCG
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-CG
*
21431456 AAACAAACGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
65 AAACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
*
21431521 GGGTGGTAGGTGGGTTTAGGCACATCTTCACATTTCTAAGTGCCAATGCCATTTTTATGGCTTGT
130 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGT
* *
21431586 AAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTAT
195 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* *
21431651 TTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGAAAGAAGTTTTG
260 TTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTG
21431716 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
325 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * * *
21431781 ATTTCGAAGTGTACAAGATTTTCTGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTGATG
390 A-CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
21431846 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCAAGGTTTG
454 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
** * *
21431911 ATGAGGGATAGGGGGCCAATATAAGGGTGAAGTACCAGCACCCATCGCACATCATGTGCGTACAC
519 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCC
* * * * * **
21431976 CCCCTGACCCCCCCAATCGCC-GAACCCCAATGCCGTCGGTCAGGTTCTCTGACGATGCTCCGGC
584 CCCCCG-GCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCC-GC
* * * * * ** * *
21432040 GATGGTTCCCCTGTGACGATAAAA-G-CGGTGCCAGCACATGCTCGAGCCTAGCATGTGCTGCCG
647 GATGGTGCCCCGGCGAAGA-AAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * * * *
21432103 TAACCCTCGGTTCGATCCCATCTTAGACTGGGAATGAACTCCGTGTGCTTAGACTGGGAATGAAC
711 CAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21432168 TCCATATGCCTAAGTCAACCTACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGAT
776 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * *
21432233 GCGCAAGCCGGGGATCGAC-CGGGTCCCCCTTTGCATGCTGCCGATCCTGCTACC
841 GCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
** * * *
21432287 ATAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* *
21432352 AACGAACGGGCGGGCGGACGGGTGGGCACTACGCCGGCCAGAGAGACGGGGATGCGGAAGCCGTG
66 AACAAACGGGC--G-GG-C----GGGCACTACGCCGGCCAGAGAGAC-GGGATGCGCAAGCCGTG
21432417 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA-TGCCAATGCCATTTTT
122 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA-AGTGCCAATGCCATTTTT
* * *
21432481 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCGTGGCAAGACGACCC
186 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * *
21432546 GTTTTCTATTTTTCACAATTTTTGAAACTTTTTAAGGTTTGAGATTTTTTAAAATTTTTTCAAAA
251 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAA
*
21432611 GGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
316 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
21432676 CAGCTTAAAAGTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACA
381 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
** *
21432741 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTTTGTTCTT
446 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
21432806 GAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGT
511 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * *
21432870 GCGCACACCCCCCGGCCCCCCGATCGTCGGAA-CCCAATGCTGTCGGTCAGGTTCTCCGATGATG
576 GCGCACCCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATG
* * *
21432934 CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCA-GCACCAGCACATGCCGGAGCCCAGCATGTG
641 CTCCG-CGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * **
21432998 CTGCTGCAACCCTTGGTCTTG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
705 CTGCCGCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * *
21433062 AATGAACTCCGTATACCCAAGTCAACCCACGAAACGAGCGTGCGAGCGGTCAGTCGGCCAGAGGG
769 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
* * ** * * * * * *
21433127 GCGGGATCCGCAAGCTGGGGATCAAC-CAGGTCCCCCTCTACATGCTACCGATCCTGCTGCT
834 GCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* *
21433188 GCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGGACTCCGTATGCCTAAGCCAACCGACGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
** * * *
21433253 AATGAGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATA-
66 AACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* * * * * *
21433317 GGTGCTAGGTGGGTTTAGGCACATCTTCTTATTTCTGCA-TGCCAATACCATTTTTAGGGCTTGC
131 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-AAGTGCCAATGCCATTTTTATGGCTTGT
* *
21433381 AAATTCATACAATGGTCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTAT
195 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
21433446 TTTTCACGATTTTTGAAATTTTTTACGGTTCGAGATTTTTTAAAAATTTTTTTGGAAGGAGTTTT
260 TTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTCGAAAGGAGTTTT
* * * *
21433511 GGCCCTAAACTTGGTAGACGTGATCCTTGTATTTGTATTGGCATGCTA-AAAAAAATTCAGCTGA
324 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCAGCTAA
*
21433575 AAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
388 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* *
21433640 TGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
453 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
** * *
21433705 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTGCCCGTCGCACATCATGTGCGCACA
518 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACC
* ** * * *
21433770 CCCCCTGAATCCCCTGATCGCCGGAACCCTAATGCCGCCGATCAGGTTCTCCGGTGATGCTCCGA
583 CCCCCCG-GCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCG-
* * *
21433835 CGATGGTGCCCCGACGAAGAAAAA--TACGACACCAGCACATGCCCGAGCCCAGCATATGCTGCC
646 CGATGGTGCCCCGGCGAAGAAAAATGTA-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* *
21433898 GCAA----C---CC---TCG------GAC--GG--T----T-TG-AT-CTTAGACTGGGAATCAA
710 GCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * *
21433936 CTCCGTATGCCTAAGTCAACCCATGGAACAAGCGTACAGGCGCTCAGCCGGCCAAAGGGGCGGGA
775 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * **
21434001 TGCGCAAGCCGGGGTTC-GATCGGGTCCCCCTCTGCATTCTGCCGATCCTGCTGTC
840 TGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * * *
21434056 ACAACCCTTGGTCCGAT-TCAATCTTAGACTAGGAGTGAACTCCGTATGCCTAAGCCAACCGACG
1 GCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
21434120 AAAC-AA---GCGGGCGGGCACTATGCCGG-CAGAGAGACTGGATGCGCAAACCGTGGATTGATA
65 AAACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * * * *
21434180 GGGAGGTAGGTGGGTTTAGGCACATCTTCTTCTTTCTATGTTCCAATGCCATTTTTATGGCTTGT
130 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGT
21434245 AAATTCATACAATAGG-CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
195 AAATTCATACAAT-GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * *
21434309 TTTTTCACGATTTTTAAAACTTTTTGCGGTTTGAGATTTTTTAAATTTTTTTCGGAAGGAGTTTT
259 TTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTT
* * * * *
21434374 GGCCCCAAGCTTGGTAGACATGATCCTTGTGTTTTTTTTGGCATGCACAAAAAATTTCAGCTAAA
324 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
21434439 AACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
389 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * *
21434504 GCTACTGGCAGCAAACCTGTAAAATCTCAAGTGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTA
454 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * * * * * * *
21434569 ATGAGGGATAGGGGGCCAACATAAGGGTCGAGTGCCAGTACCCATCGCACATCATATGTGCACAC
519 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCC
* * * * **
21434634 CCCCCGGCCCCCCCGATTGGCAGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCT-CGAC
584 CCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCG-C
* * *
21434698 GATGGTGCCCCGGTGAAGAAAAATGCA-GCACCAACACATGCCCGAGCCCA-CATGTGCTGCCGC
647 GATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * * *
21434761 AACCCTCGGTCCGATCCGATCTTAAACTGGGAATGAACTCTGTATACTTAGACTGGGAATGAACT
712 AACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * **
21434826 TCGTATGCCTAAGTCAAGCCATGAAACGA--G-GCGGGCGCTCAGTCGGCCAGAGGGGTAGGATG
777 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * *
21434888 CGCAAGCCGGGGATCAG-TCGGGTCCCCTTCTACGTGCTACCAATCTTGCTACC
842 CGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * *
21434941 ACAACCCTTGGTCCGGTCTAATCTTAGGC-GGGTAATGAACTCTGTATGCCTAAGCCAACCGACG
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGG-AATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
21435005 AAACGAGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCGATA
65 AAACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* *
21435070 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GGATGCCAATGCCATTTTTACGGCTTG
130 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAG-TGCCAATGCCATTTTTATGGCTTG
* * * * * *
21435134 TAAATTCATACAATGGTCCCCTAAGCTTTCACGTGAAGTTTCATGGCCAGACGTCTCATTTTCCA
194 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* ** * * *
21435199 TTTTTCACAATTTTCAAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTC-AGAAGGAATTT
259 TTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGA-AAGGAGTTT
* * * * *
21435263 TAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATCCACAAAACAATTCAACTAA
323 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
21435328 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
388 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
21435393 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
453 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
21435458 GATGAGGGGTAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATTGCACATCATGTGCGCACA
518 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-
* * ** * * *
21435523 CTACGCCCTGGCCCCCCGATCATC-GAAACCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCC
582 C--CCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCC
* * * * *
21435587 GATGATGGTGCCCCGACGAAGAAAAATGT-GGCACCAGCACATGCTCGATCCCAGCATGTGCTGT
645 G-CGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * *
21435651 CGCAACCCTCAGTCCAG-TCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGATTGGGAACT
709 CGCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA-T
* * * * *
21435715 GAACTCCGTATGCTTAAGT-AACACGCGAAACGAGCGTGC-GGTGCTCAGCTGGCCAGA-GGGCG
772 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * * * *
21435777 GGATGCGTAAGTCGAGGATCGGC-CGGGT---CCTCT--GT-CTG-CAATCTTGCT---
837 GGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
** * * *
21435825 GCAACCCTCAAT-CGAGT-TAGATCTTAGACTGAGAATG---TCTGTAAGCCTAAG-CAACCGGA
1 GCAACCCTCGGTCCG-GTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC-GA
** * * *
21435884 CGAAACAGCCGGGCGAGACGGG-A-TATGCCGGCCAGAGA-AC-GGAT-----AGCCGCGGATCG
63 CGAAACAAACGGGCG-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* **
21435940 -T--GGTGGT-GGTGAGTTT-GGCACATCTTCATATTTCGCA-TGCCAATGCCATTTTTATGGCT
127 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCT
* *
21435999 TGTAAATTCATACAATGGTCCCTTAAACCTTCACGTGAGGTTTCATGGCAAGACG-CTTCGTTTT
192 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC-TCGTTTT
* * ** * * *
21436063 C-ATTTTTCATGA-TGTTG-AAC-CATTAC-GTT--TGATTTTTT-AAATTTTTTTGGAA-G-G-
256 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGT
21436117 --T---CCCAAACTT-GTAGACGTGATCCTTGTATTTTTGTTGGCATG--CAAAAAAATTCAG-T
321 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* *
21436173 -AAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACATTA
386 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * *
21436237 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAAGT
451 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
21436302 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATCACACATCATGTGCGCA
516 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--
* * **
21436367 CACCCACCCCCGGCCCCCTCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGATGC
579 CACCC-CCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGC
* * ** ** *
21436432 TCCGACAATAGTGCCCCGATGAAGAAAAATGT-GGTGCCAGCACATGCCCGACCCCAGCATGTGC
642 TCCG-CGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGC
*
21436496 TGTCGCAA-CC-C--T-C-G---G-T-TT--A----G--T---CT--G-AT-CTTAGACTGGGAA
706 TGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
* * * * *
21436535 TGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGTCGGCCAAAAGGGC
771 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC
* ** * *
21436600 GGG-TGCGTAAGCCGGGGATC-AATCGGGTCCCCCTCTGCATGCTGCCGATCCAGCTACC
836 GGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* ** * * * *
21436658 GCAACCCACGGTCCAATC-CATACTTAGACTGGGAATGAACTCAGTATGCCTAAGCCAACAGATG
1 GCAACCCTCGGTCCGGTCTGAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* *
21436722 AAACAAGCGGGCGGACGGGCGGGCGGGCACTATGCCAGCCAGAGAGACGGGATGCGCAAGCCGTG
65 AAACAA--------ACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
21436787 GATCGAAAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA-TGCCAATGCCATTTTT
122 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-AAGTGCCAATGCCATTTTT
* * *
21436851 ATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGACGTTTCAGGGCAAGACGACTC
186 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * ** ** * * *
21436916 ATTTTCTATTTTTCATGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTTGGAA
251 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAA
* * * *
21436981 GGAGTTTTGCCCCCAAACTAGGTGGCCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
316 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * * *
21437046 CAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCAATTTTAGACA
381 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* ** *
21437111 TTTTAATTTCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
446 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * ** * * * *
21437176 AAGGTTTTATGAGGGATAGGGGGCCAATATAAAAGCCAGGTACCAGCACCCATTGTACAACATGT
511 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* *
21437241 GCGCACACCCCCCCGG-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGAT
576 GCGCAC-CCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGAT
** **** * * * * *
21437305 GCTCCGACGATGGCACCCTAAAGAAGAAAAATG-CGACACCAGCACATGCCTGAGCCCTGAATGT
640 GCTCCG-CGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * *
21437369 -CTTGTCGCAACCCTCGGTCCAGTCCTATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGG
704 GC-TGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
21437433 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCCGACCAGAGG
768 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * **
21437498 GGCGGG-TGCGCAAGCCGGGGATCGG-TCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTGTC
833 GGCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * *
21437559 GCAACCCTCAGTCTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGATG
1 GCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
21437623 ----AAACGAGCGGG-GGGCACTATGCCGGCCAGAGAGACGGTATGCGCAAGCCATGGATCGATA
65 AAACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* * * * *
21437683 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCACTACCATTTTTGTGGCTTAT
130 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGT
* * ** * *
21437748 AAATTCATTCGATGGTCCCTTAAGCCTTCACGCAAAGTTTCATGGCAGGATGACTCGTTTTCTAT
195 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
** * * *
21437813 TTTTCACGATTTTCAAAACCTTTTT-TGGTTCGGGATTTTTTAAAATTTTTTC-AGAAGGTGTTT
260 TTTTCACGATTTTTGAAA-CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGA-AAGGAGTTT
***
21437876 TGGTTTCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATTCAGCTA
323 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTA
*
21437941 AAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
387 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
21438006 TGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTT
452 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
21438071 TGATGAGGGATAAGGGGCAAATATAAGGGCCAAGTGCCATCACCCATCGCACATCATGTGCGCA-
517 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* ** *
21438135 CACCCCCGGCCCCCCTGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGGTGACGCTCCG
582 CCCCCCCGGCCCCCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCC-
*
21438200 GCGATGGTGCCCCGACGAAGAAAAATGT-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
645 GCGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * *
21438264 GCAACCCTCGATCAGG-TCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGATTGGGAATGA
710 GCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * * * * *
21438328 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGTGTGCGGGCACTCAACCGACCAGAGGGGTGAG
774 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * * * *
21438393 ATGCGTAAGCCGAGGATCAG-TCGAGTCCCCCTCTGCGTGTTGCCGATCGTACTACC
839 ATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * * * *
21438449 GTAACCCTTGGTCTGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCTAATCGATGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * ** * *
21438514 AACGAGCGGGCGTACGGGCGGGCACTACATCGGCCAAAGAGACGGGCTGCGCAAGCCGTGGATCG
66 AACAAAC-GG-G--CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
*
21438579 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GGATGCCAATGCCATTTTTATGGC
127 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAG-TGCCAATGCCATTTTTATGGC
* *
21438643 TTGTAAATTCATACAATGGTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGACGACTC-ATTT
191 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* ** * *
21438707 CCA-TTTTCACGATTTTCAAAAACTTTTTGCGGTTCAAGA-TTTTTAAAATTTTTTCAGAAAGGA
256 CTATTTTTCACGATTTT-TGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC-GAAAGGA
* * * *
21438770 GTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCAATGCACAAAACAATTCA
319 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC-ATGCACAAAAAAATTCA
* * *
21438835 ACTAAAAACT-GTCAGTGTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
383 GCTAAAAACTCG-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
*
21438899 TTTAATGGCTACTGGCAGTAAACCTGT-AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
447 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
** *
21438963 A-GTTTGATGAGGGATAGGGGGCTTATATAAGGGCC-AGTACCAGCACCCATCGCTCCATTCATG
512 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC-ACA-TCATG
* * *
21439026 TTCGCACACCCCCCCCGG-CCCCCGATCGCCGGAAACCCCAATGCCGTCGTTCAGGTTTCTCC--
575 -T-GCGCACCCCCCCCGGCCCCCCGATCGCCGG-AACCCCAATGCCGCCGGTCAGG-TTCTCCGG
* ** * * * *
21439088 CGATG--CCGACGA---TGCTTCGGCGATG------GT--GC-CC--C-GATG---AAG---A-A
636 TGATGCTCCG-CGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGC
** ** * * * * * *
21439129 AAATGCTGCCATAACCCTCGGTCCAGTCCGATCTTAGACTAGGAATGAATTGCATATGCTTAGAC
700 ATGTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * * *
21439194 TGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAAAGAGTGTTCGGGCGCTCAGCCGGCTAG
765 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * *
21439259 AGGGGCGGGATGCGCAAGTCGGGGATCAGC-CGAGTCCCCCTCTGCATGCTGTCAATCCTGCTAC
830 AGGGGCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAC
21439323 C
895 C
* * *
21439324 GCAACCCTTGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
21439389 AACAAGAGAGCAGGCGGGCGGGCGGGCGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
66 AAC---A-A--A--CGGGCGGGC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * **
21439454 ATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTT
119 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTT
* * * *
21439519 TTATGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCCAGACAAC
184 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
21439584 TCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGATTCTG-GATTTTTTAAAATTTTTTCG
249 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTC-
* *
21439648 GAAA-GAGTTTTGGCCCCAAACTTGTTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
312 GAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
21439712 AATTTAGC-AAAAACTCAAAGTGTACGAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
377 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
21439776 GACACTTTAACGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
442 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
21439841 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCTCCCATCGCACATC
507 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * ** * * *
21439906 ATGTGTGCACACCCCCCGGCCCCCCGATCATCGAAACCCCAATGCCGCCGATCAAGTTCTCC---
572 ATGTGCGCACCCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
* * * * * * *
21439968 ---G----GCGATGGTGACCTGGTGAAGAAAAATGCA-ACACCAGGA-ATGCCCGAGCCCCGCAT
637 GATGCTCCGCGATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * *
21440024 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAAGTTCGTACGCTCAGACTG
702 GTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * *
21440089 GGAATGAACTCCGTATGCCTAAG-CGAACCCAGGAAACGAGCGTGCGGGCACACAACCGGCCAAA
767 GGAATGAACTCCGTATGCCTAAGTC-AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * * * * *
21440153 GGGGCGAGATGCACAAGCCGGGGATTGGC-CGGGTCCCCCTTTGCATGCTGTCGATCCTGCTACC
831 GGGGCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * * * *
21440217 GTAACCCTCGGTCTGGTATGATCTTAGACTGGCAATGAACTTCGTATGCCTAAGCTAACCGATGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
** * ** *
21440282 AACGAGCGGGCGGGCGGACGGGCAGGTGGGCACTACGTCGTTCAGAGAGACGGGATACGCAAGCC
66 AAC-A---AAC--G-GG-CGGGC----GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
21440347 GTGGATCGATAGGGTGGTCGATGGGTTTAGGTACATCTTCATATTTCTGCA-TGCCAATGCCATT
119 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-AAGTGCCAATGCCATT
21440411 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
183 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
21440476 CTCATTTTCTATTTTTCATGATTTTGGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCG
248 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCG
* *
21440541 AAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGAATTTTTGTTGGCATGCACGAAAAA
313 AAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAA
* * *
21440606 CATT-AGCTAAAAACTCGAAGTGTACAAGATTTTCTGACCATTTAAAAAAAGTGTCCCCATTTCA
377 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
21440670 GACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAA-GGGGTGTGAGT
442 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
21440734 TCTTGAGGTTTGATGGGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATC
507 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * * *
21440799 ATGTGCGCACACCCCCTGGCCCCGCCGATCGTC-GAAACCTAGAAGTCACCGGTCAGGTTCTCCG
572 ATGTGCGCACCCCCCCCGGCCCC-CCGATCGCCGGAACCCCA-ATGCCGCCGGTCAGGTTCTCCG
* * * * *
21440863 GTGATGCTCCGGCGATGGTGCCCCAGTGAAGACAAATG-CGGCACCTA-CACATGCTCGAGCCCA
635 GTGATGCTCC-GCGATGGTGCCCCGGCGAAGAAAAATGTAGGCACC-AGCACATGCCCGAGCCCA
* * * *
21440926 GCATATGCTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAG
698 GCATGTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * *
21440991 ACTGGGAATGAACTCCGTATGCCTAATTCAACCCACGAAACGAGCATGCGGGCGCTCAACCGGCC
763 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * * * * *
21441056 AGAGGGGAGGGATGCTCAAGCCGAGGATCGGC-CAGGTCGCCCTCTACGTGCTGCTGATCTTGCT
828 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT
21441120 ACC
893 ACC
** ** *
21441123 ATAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * **
21441188 AACAGCAA-GGCCGATAGTTCGACGGGCA-TA--CCAGCCAGAGAGACGGGATGCGCAAAGTTTG
66 AACA--AACGGGCG---G---G-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGC-AAG-CCG
** * * * *
21441249 TTCATCGATAGGGTGGTA-GTGTGTTTAGGCACATC-TCATATTCCTGCATTGCCAATGCCATTT
120 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-AAGTGCCAATGCCATTT
*
21441312 TTATGGCTTGTAAATTCATACAATGGT--CTTAAGCCTTC-CGGTGAAGTTTAAT-GCAAGAC--
184 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAAGACGA
* * * * **
21441371 CTCGTTTTTTTATTTTTCATGA-TTTTGAAACTTTTTGCTGTTTTAAGATTTTTTTAAAATTTTT
248 CTCG-TTTTCTATTTTTCACGATTTTTGAAACTTTTTAC-GGTTCGAGA-TTTTTTAAAA-TTTT
* * *
21441435 TTCGAAAGGATTTTTGG-CCAAAAC-TGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC-A
309 TTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
21441497 AAAAATTCAAC-ACAAAACTCCACGTGTACAAGATTATTTGTGACCATTTGAAAAAAAGTG-CCC
374 AAAAATTCAGCTA-AAAACTCGAAGTGTACAAGA-T-TTTGTGACCATTTG-AAAAAAGTGTCCC
21441560 CATTTTCAGACACTTTAAT-GCTACTGGCA-C-AACCTGT-AAATCTGCAAAAATGCT-TTT-AG
435 CA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT-C--AAATGCTCTTTAAG
*
21441619 GGGGTGTGAGTTCTCGA-G-TTGATG-GGGA-AGGGGGCCAATACAAGGGCCAAGTACCAGCACC
496 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * * *
21441680 CATCGCACATCATGCGTGCACACCCCCCGGCCCCCCGATCGCCGGAACTCTAATGCCACCGGTCA
561 CATCGCACATCATGTGCGCACCCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCA
* * *
21441745 GGTTCT-C-----TG----GCGATAGTGCCCCGGTGAAGAAAAA--TACGGTACCAGCACATGCC
626 GGTTCTCCGGTGATGCTCCGCGATGGTGCCCCGGCGAAGAAAAATGTA-GGCACCAGCACATGCC
* *
21441798 CGAGCCCAGCATGTGCTGTCG-AAACC-C--T-C-G---G-TC-----C---G---G---TCCG-
690 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGT
* * *
21441838 AT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCCATGAAACGAGCGTGCGGGCGCTC
755 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * * *
21441902 AACCGGCCAGAGGGGCGGAATGCGTAAGCCGGGGATCGGC-CAGGTCCCCCTCTGTGTGCTGCCG
820 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCG
*
21441966 ATCCTGCTGCC
885 ATCCTGCTACC
* * * *
21441977 GCAACCCTCAGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
21442042 AAC-AA---GCGGGCGGGCACTACGTCGGTCAGAGAGACGGGATGCACAAGCCATGGATCGATAG
66 AACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* *
21442103 GGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTA
131 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGTA
* *
21442168 AATTCATATAATGGTCCCTGAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
196 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * *
21442233 TTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTAAAAATTTTTT-GGAAGGATTTTTGG
261 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
* *
21442297 CCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAA
326 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
21442362 CTCAAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
391 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
21442427 TACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAT
456 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* ** *
21442492 GAGAGATAGGGGGAAAATATAAGGGCCAAGTACCAGCACCCATCGCACATTATGTGCGCACCCCC
521 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCC
* * * * * *
21442557 GCCTCGGCCCCCCCGATCGTCGGAACCCCAATGCTGTCAGTCTGTTTCTCCGGTGA---T----G
586 -CC-CGG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGCG
* *
21442615 --GG-GCCCCAGCGAAGAAAAAT-AAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
648 ATGGTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* ** * *
21442676 ACCCTCGATCCAATCCGATCTTAGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
713 ACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* *
21442741 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCGGAGGGGCGGGATGC
778 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * **
21442806 GCAGGCTGGGGATCGG-TCGGGTCCCCCTCTGCGTGCTACTGATTGTGCTACC
843 GCAAGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
* * * * ** * **
21442858 GTAACCCTCAGTTCGATCCAATCTTAGACTGGGAATGAACTCCGTGTGCCTAAGCCAAATGACGA
1 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
** * * * *
21442923 AATGAGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGTCATGGATCGATAG
66 AACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
**
21442988 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTA
131 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGTA
*
21443053 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATT
196 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * *
21443118 TTTCATGATTTTTGTAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
261 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
* *
21443183 CCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAA
326 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * * *
21443248 CTCGAAGTGTACAAGATTTTGTGACCAATTGAAAAAATTGTCCCCACTTCAGATACTTTAATGGC
391 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
21443313 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGAT
456 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* ** *
21443378 GAGGGATAGGGGGCCAATATAAGGGCCAAGTTCCAGCACCCATCGCACATCATGTGTACACACCC
521 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCC
** * * * *
21443443 CCCGGCCCCCCGATCGCCCGG-ACCCCAAAACCGCTGGTCAAGTTCTCTGATGATGCTCCGACGA
586 CCCGGCCCCCCGATCG-CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCG-CGA
*
21443507 TGGTGCCCCGACGAAGAA
649 TGGTGCCCCGGCGAAGAA
21443525 CCCCCTCTAC
Statistics
Matches: 14361, Mismatches: 1696, Indels: 1088
0.84 0.10 0.06
Matches are distributed among these distances:
821 20 0.00
822 30 0.00
823 37 0.00
824 8 0.00
826 7 0.00
828 1 0.00
829 4 0.00
830 7 0.00
831 1 0.00
832 2 0.00
833 24 0.00
834 1 0.00
835 1 0.00
836 20 0.00
837 6 0.00
838 1 0.00
839 1 0.00
842 7 0.00
843 25 0.00
844 68 0.00
845 81 0.01
846 265 0.02
847 72 0.01
848 184 0.01
849 29 0.00
850 36 0.00
851 14 0.00
852 62 0.00
853 2 0.00
854 186 0.01
855 90 0.01
856 19 0.00
857 19 0.00
858 84 0.01
859 25 0.00
860 11 0.00
861 17 0.00
862 53 0.00
863 339 0.02
864 176 0.01
865 16 0.00
866 24 0.00
867 291 0.02
868 520 0.04
869 76 0.01
870 11 0.00
871 5 0.00
872 2 0.00
873 15 0.00
874 11 0.00
875 356 0.02
876 178 0.01
877 29 0.00
878 7 0.00
879 196 0.01
880 80 0.01
881 240 0.02
882 104 0.01
883 252 0.02
884 134 0.01
885 407 0.03
886 272 0.02
887 25 0.00
888 304 0.02
889 804 0.06
890 689 0.05
891 264 0.02
892 371 0.03
893 827 0.06
894 885 0.06
895 973 0.07
896 178 0.01
897 319 0.02
898 245 0.02
899 228 0.02
900 84 0.01
901 597 0.04
902 691 0.05
903 856 0.06
904 474 0.03
905 33 0.00
906 248 0.02
907 1 0.00
908 1 0.00
910 3 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
AACAAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAAGTGCCAATGCCATTTTTATGGCTTGTA
AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACCCCC
CCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGCGATG
GTGCCCCGGCGAAGAAAAATGTAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
CTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
AGCCGGGGATCGGCTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
Found at i:21433061 original size:26 final size:26
Alignment explanation
Indices: 21433025--21433075 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
21433015 CTTGTCTGAT
21433025 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21433051 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
21433076 ACCCAAGTCA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21435710 original size:26 final size:27
Alignment explanation
Indices: 21435674--21435730 Score: 107
Period size: 27 Copynumber: 2.1 Consensus size: 27
21435664 CCAGTCTGAT
21435674 CTTAGATTGGGAA-TGAACTCCGTATG
1 CTTAGATTGGGAACTGAACTCCGTATG
21435700 CTTAGATTGGGAACTGAACTCCGTATG
1 CTTAGATTGGGAACTGAACTCCGTATG
21435727 CTTA
1 CTTA
21435731 AGTAACACGC
Statistics
Matches: 30, Mismatches: 0, Indels: 1
0.97 0.00 0.03
Matches are distributed among these distances:
26 13 0.43
27 17 0.57
ACGTcount: A:0.26, C:0.18, G:0.25, T:0.32
Consensus pattern (27 bp):
CTTAGATTGGGAACTGAACTCCGTATG
Found at i:21437426 original size:26 final size:26
Alignment explanation
Indices: 21437397--21437449 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21437387 CCAGTCCTAT
21437397 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21437423 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
21437449 C
1 C
21437450 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21438324 original size:26 final size:26
Alignment explanation
Indices: 21438286--21438338 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21438276 CAGGTCTGAT
21438286 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
21438312 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21438338 C
1 C
21438339 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21439212 original size:26 final size:26
Alignment explanation
Indices: 21439161--21439213 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
21439151 CCAGTCCGAT
* *
21439161 CTTAGACTAGGAATGAATTGCATATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
21439187 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
21439213 C
1 C
21439214 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:21440989 original size:26 final size:26
Alignment explanation
Indices: 21440960--21441012 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21440950 CCGATCCAAT
21440960 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21440986 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21441012 C
1 C
21441013 CTAATTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21442724 original size:26 final size:26
Alignment explanation
Indices: 21442695--21442747 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21442685 CCAATCCGAT
21442695 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
21442721 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
21442747 C
1 C
21442748 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:21444331 original size:26 final size:26
Alignment explanation
Indices: 21444295--21444347 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21444285 TTGGTCTGAT
*
21444295 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21444321 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21444347 C
1 C
21444348 CCAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21447021 original size:26 final size:26
Alignment explanation
Indices: 21446985--21447037 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
21446975 CTGGTCCGAT
21446985 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGGGAATGAACTCT-GTATG
21447011 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
21447037 C
1 C
21447038 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:21447186 original size:902 final size:901
Alignment explanation
Indices: 21443525--21468890 Score: 14918
Period size: 895 Copynumber: 28.1 Consensus size: 901
21443515 CGACGAAGAA
* * * *
21443525 CCCCCTCT-ACGTCCTGTCGATCCTACTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGA
1 CCCCCTCTGA-GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * * * *
21443589 ATTAACTCCGTATGCCTAAGCCAACCGATGAAACAAGC-AGGCGGATGGTTC-GACGGGCACTAC
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGG-GG-CGG-GCGGGCGGGCACTAC
* ** ** *
21443652 GCCAGCCAGAGAGACGGGATGCGCAAGTTGTTCATCGATAGGGTGGTAGGTGTGTTTAGGCACAT
127 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
21443717 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
192 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* *
21443782 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTGTTTTTCATGATTTTTGAAACTTTTTG
257 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
* * * * * *
21443847 CTGTTCGAGG-TCTTTTAAAATTTTTTCGAAAGGATTTTTGGCCCAAAACTTGGTAGACATGATC
322 CGGTTCG-GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
21443911 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAACAAAAAACTCCAAGTGTACAAGATTTTGTG
386 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* * *
21443976 ACCATTTGAAAAAATTGGCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAAT
451 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
*
21444041 CTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
516 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
21444106 GGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGTCCCGCCGATCGCCGGA
581 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGTCGGA
* * * *
21444171 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTACCCCGATGAAGAAAAAT
644 ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT
* * * * * * * *
21444236 ACGACACCAGCACTTGCCC-AGCCCAGCATGTGCTACTGCAACCATCGGTTTGGTCTGATCTTAG
709 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAG
* * *
21444300 ACTGGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCATGAA
774 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * ** * ** *
21444365 ATGAACGTATGGGTGCTCAGCCGGCCAGAGGGGTTGGATGCGTAAG-CTGGGGATCGGCCGGGT
839 ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATCGGCCGGGT
* * * * * * *
21444428 CCCCCTCT-ATGTGCTATCCATCCCGCTGCCGCAACCTTCAGTCTGGTCTGATCTTAGACTGGGA
1 CCCCCTCTGA-GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * *
21444492 ATGAACTCCGTATGCCTAAGCCAACCGAC-AAA--A-C-A--AGCGGGTGGGCAGGCATTACGCC
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCC
* * * **
21444550 GGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGCTAGGTGGGTTTAGGGTCATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
21444615 CATATATT-TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTGAAGCCT
195 CATAT-TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* *
21444679 TCACGTGAAGTTTCATCGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* * ** *
21444744 GTTAGGGATTTTTTAAAATTTTTTCGGAGGGAGTTTTGGCAACAAACTTGGTAGACATGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* *
21444809 GTATTATTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
21444874 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * * * *
21444939 AAATGCTCTTGAAGGGGGTGTGAGTTTTCAAGGTTTGATGAGGGATAGGGGGCCATTAAAAGGGC
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* *
21445004 CAAGTACCAGTACCCATCACACATCATGTGCGCACACCCCTCCGGCCCCCCGATCGTCGGAACCC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGGCCCCCCGATCGTCGGAACCC
* * * * * * *
21445069 CAATGCCGCCGGTCAGGTTCTCCAGTGATTCTTCGGCGACGGTGCCTCGACGAAGAAAAATGCGG
648 CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
* * ** **
21445134 CACCAGCACATGCCTGAACCCAGCATGTGCTGCCGCAACCCTCAATCCAGTCCGATCTTAGACTG
713 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTG
* * * * * *
21445199 GTAAGGAACTCCGTATGATTTGACTGGGAATGAACGCCGTATGCCTAAGTCAACCCATGAAACGA
778 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * *
21445264 GTGTGCGGGCACTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
843 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * * * * * * * *
21445323 CCCCCTCTGCA-TGCTATCGGTCATGCTACCACAACCCTCGATCCGGTTTGATCTTAGACTAGGA
1 CCCCCTCTG-AGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * **
21445387 ATGAACTTCGTATGCCTAAGCCAACTGACGAAAC-A---A---GCGGGCGGGTAGGCACTACGCC
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCC
** **
21445445 GGCCAGAGAGACAAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGGTCATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
21445510 CATATATT-TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
195 CATAT-TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * *
21445574 TCACGTGAAGTTTCATTGTAAGACGACACGTTTTCTATTTTTCATGATTTTTGAAAATTTTTGCG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* ** * *
21445639 GTTCGGGATTTTTTAAAATTTTTT-TGAAGGGAGTTTTGGCAACAAACTTGGTAGACATGATCCC
324 GTTCGGGATTTTTTAAAATTTTTTCGGAA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* *
21445703 CGTATTTTTGTTGGCATGCACACAAAAATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGAC
388 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
21445767 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
453 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
21445832 CAAATGCTCTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGG
518 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* *
21445897 CCAAGTACCAGCACCCATCACACATCATGTGCGCACA-CCCCCGGCCCCCCTATCGTCGGAACCC
583 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCC
* * * * * *
21445961 CAATGCTGTCGGTCAAGTTCTTCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGG
648 CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
* * *
21446026 CACCAGCATATGCCCAAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTG
713 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTG
** * ** *
21446091 ATAATGAGCTCTATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGA
778 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* *
21446156 GCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGT
843 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * * * * *
21446215 CCCCCTCTGCGTGCTGCCCATCCTGCTGCTGCAACCCTCGGTTCAGT-TAGATCTTAGACTGGGA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTA-ATCTTAGACTGGGA
* *
21446279 ATGAACTACGTATGTCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGC
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAG-GGGCGGGCGGGCGGGCACTACGC
* *
21446344 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTCAAGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* *
21446409 TCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * * *
21446474 TCACGTGAAGTTTGATGGCAAGAGGATTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* **
21446539 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTGTTATCCCCAAACTTGGTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-T
* * * *
21446604 TTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGTACTGTATAAGATTTTGTGAC
388 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
21446669 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTATAAAATCT
453 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * *
21446734 CAAATGCTCTTTAAGGTGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAAGG
518 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
*
21446799 CCAAGTACCAGCACCCATCGGACATCATGTGCGCACACCCCCCGGCCCCCACGATCGTCGGAACC
583 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC-CGATCGTCGGAACC
* * * * * *
21446864 CTAATGCCGCCGGTCAGGTTCTTCGGTGATGCTCCGACGATGATGCCCAG-CGAAGAAAAATACG
647 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCG
* * *
21446928 GCACCAGCACATGCCCGATCCCAGCACGTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACT
712 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACT
* * *
21446993 GGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCAAGAAACG
777 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
** * * *
21447058 AGCGTGCGGTTGCTCAG-CGGACCAGAGGGGCGGGATGCACAAGTCGGGGATCAGTCGGGT
842 AGCGTGCGGGCGCTCAGCCGG-CCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * * ** * *
21447118 CCCCCTCT-AGTGCTGTCGATCTTTCTGTCGCAACCCTCGGTTTGGACCAATCTTAGACTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* ** *
21447182 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTAGGCGGGCGGGCACTACGTC
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAG-GGGCGGGCGGGCGGGCACTACGCC
* * **
21447247 GGCCAGAGAGACGGGATGCACAAG-CGTGGATCGATAAGGTGGTAGGTGGAATTAGGCACATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
21447311 CATATTTCTGCATGCCAATGCCATATTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTT
195 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
21447376 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG
260 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
* * * *
21447441 TTCGGGATTTTTTAAAATTTTTTCGAAAGAATTTTTGGCCCCAAACTTGGTAGACGTGATACTTG
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * * * * * * * *
21447506 TATTTTTTTTGACATGCCCGAAAAAATTCAGCTAAAAACTCAAAATGTAAAAAAATTTGTGGCCA
390 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
21447571 TTTGAAAAAAGTGTCCCCATTTCAAACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
455 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
21447636 AATGCTCTATAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
520 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * *
21447700 AAGTATCAACACCCATCGCACATCATGTGGGCACA-CCCCCTGCCCCCCGATCGTTGGAACCCCA
585 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCA
* * * * * * *
21447764 ATGCTGCCAGTCAGGTTCTTCGACGATGCTCTGATGATGGTGCCCCGACGAAGAAAAATGCAGCA
650 ATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCA
* * * *** *
21447829 CCAGCACATGCCCGAGCCCAGTATGTGCTACCGTAACCCTCGGTCCAATCCGATCTTAGACTGTG
715 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGG
*
21447894 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAAC
780 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * **
21447959 GTGCGGGCGCTCAGCCGGCCAAAGGGGCAGGATGAGCATGTCGGGGATCGGTTGGGT
845 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * ** * * * * *
21448016 CCCCCTCTGCGAGCTACCAATCCTGCTGCCACAACCCTCGGTCTGATCTGATCTTAGACTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * * *
21448081 TGAACTCCGTATGCCTAAGCTAATCGAC-AAA--A-CGA---GCGGGCGGGCAGGCACTACGCTG
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
* * * *
21448139 GCCAAAGGAGAAGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTCGGCACAACTT
131 GCCAGA-GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * ** * *
21448204 CATATTTCTACGTGCCAATAACATTTTTATGGCTTGTAAATTCATACAGTGGTACCTTAAGCCTT
195 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
21448269 CACGTGAAGTGTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG
260 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
* * *
21448334 TTCGGGATTTTCTAAAATTTTTTCAGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * *
21448399 TATTTTTATTGGCATGCATAAAAAAATTCAGCTAAAAACTGGAAGTGTACAAGATTTTGTGACCA
390 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
21448464 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCA
455 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * * *
21448529 AATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGGTGAGGGATAGGGGCCCAATATAAGGGCC
520 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
21448594 AAGTACCAGCACCCATCGCACATCATGTGCGCACA--------CCCCCCGACCGTCGGAACCCCA
585 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCA
* * * * * * **
21448651 ATGCCGTCGGTCAGGTTCTCCGACGATGCTCC-AGCGATGGTGCCCTGGCAAAGAAATATGCATC
650 ATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGC
* * *
21448715 ACTAGCACATGCCTGAGCCCAGCATGTGCTACCGCAACCCTCAGTCCGGTCCGATCTTAGACTGG
714 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G---G----T---CT-G
*
21448780 GAATGAACTCTGTATTCTTAGACTTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
762 G--T---C-C-G-A-TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * *
21448845 ATGCCTAAGTCAACCCGCGGAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATACGCA
818 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * *
21448910 AG-CTGGGAATCGGTCGAGT
883 AGTC-GGGGATCGGCCGGGT
* * * * * *
21448929 CCCCTTCTGCGTGCTGTTGATCCTGCTGTCGCAACCCTCAGTCCGGTCTGATCTTAGACT-GGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * * * * * * *
21448993 -AAACTCTGTACGCCTAAGCCAACCGACAAAACGAAC-AGGCAGACGGACGGGCGGGCACTACAC
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGG--GGCGGGCGGGCGGGCACTACGC
** * * *
21449056 CAACCAGAGAGACGGGATGCGCAAGCCGGGGATCGATAGGGTGGGAGGTTGGTTTAGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
*
21449121 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAGACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* *
21449186 CCACGTGAAGTTTCATGGCAAAACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* * * * * **
21449251 GTTCGGGATTTTTTCAAATTTTTTTGAAAGGATTTTTTGCCCCAAACTTTTTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
21449316 GTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
21449381 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
21449446 AAATGCTCTTTATA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAGGGG
519 AAATGCTCTTTA-AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * * **
21449510 CCAAGTACCAGCACCCATCGCATATCATGAGCACACACCCCCTGGCCCCCCTGATCGTCAAAACC
583 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGTCGGAACC
* * *
21449575 CCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGAAGATGGTGCCCCGACGAAGAAAAATGTG
647 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCG
* * *
21449640 ACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACT
712 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACT
*
21449705 --G---GAA------ATG---A-AC------T---CT--GTATGCCTAAGTCAACCCACGAAATG
777 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * * * **
21449744 AGCATGCGGGCGATTAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCTTGT
842 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * ** * * * * * *
21449804 CACCCTCTGCGTGCTACCGATCCTGCTGCTGTAACCCTTGGTCTGGTCTGATCTGAGACTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * * *
21449869 TGAACTCCATATGCCTAAGCGAACCGATGAAACGAGC-A--GGCGGGCGGGCAGGCACTACGCCG
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
*
21449931 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTC
131 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*** * *
21449996 ATATTTCTATGTGCCAATCCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTC
196 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * *
21450061 ATGTGAAGTTTCATGGTC-AGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGG
261 ACGTGAAGTTTCATGG-CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
** ** * *
21450125 TTCGGGATTTTTTAAAATTTTTTCCAAAGGAGTTTTCACCCCAAATTTGGTAGACGTGATCCTTT
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * *
21450190 TATTTTTTTTGGCATGCACAAAAAAATGCAGCCAAAAACTCGAAGTGTACAGGATTTTGTGACCA
390 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* * *
21450255 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTAGCAGCAAACCTATAAAATCTCA
455 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
21450320 AATGCTCTTTAAGGGGGTGTTAGTTCT-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
520 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * * * *
21450384 AAGTTCCAGCACCCATCGCACATCATGAGCACACA-CTCCC--CCCTCCGATTGCCGGAACCCCA
585 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCA
* * * * * * * **
21450446 TTACTGCCGGTCAGGCTT-TCCGACGATGCTCTGGCGATGGTGCCTCGACGAAGAAAAATATGGC
650 ATGCCGCCGGTCAGG-TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * ** * * * * *
21450510 ACTAGTACATGCTCGAGCCTGGCATGTGCTGTCGCAAACCTCGGACCGGTCCGATCTTAGACTAG
714 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGG
** * *
21450575 GAATGAACTCTATATGCTTAGACTGGGAATGAACTCCGTACGCCTAAGTCAACCCACGAAATGAG
779 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * * ** * *
21450640 CGTGCGGGCGCTCAGCCGGCCAAAGGGGCGGGAAGTGTAACCCGAGGATCGGTCGGGT
844 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * ** ** * ** * *
21450698 CCCCCTTTGTGTGCTACCGATCCTGCTGCCATAACCCTTGGTTTGGTCTGATCTTAGATTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * *
21450763 TGAACTCCGTATGCCTAAGCCAACCGAAG-AA--A-CGA---GCGGACGGGCGGGCACTATGCCG
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
* * *
21450821 CCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATATGGTGGTAGGTGGGTTTAGGCACATCTTT
131 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * *
21450886 ATATTTCTGCATGCCAATGCCATTTTTATGGCCTCTAAATTCGTACAATGGTCCCTTAAGCCTTC
196 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * *
21450951 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTTATGATTTTTGAAACATTTTGTGGT
261 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGT
* * ** *
21451016 TCAGGATTTTTTAAAATTTTTTGGGAAGGAGTTTTGGCCAAAAACTTGGTAGTCGTGATCCTTGT
326 TCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
*
21451081 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGA-TTTGTGACCAT
391 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
** * * ** * * *** * * *
21451145 TTGAAAAAAGTGTCATCATATTTC-TAC-GTGCCAAT-GCCATTTTTATG---GCTTGTAAATTC
456 TTGAAAAAAGTGTC--CCCATTTCAGACACT-TTAATGGCTACTGGCA-GCAAACCTGTAAAATC
* * *** *** *** ***
21451204 AT-ACAATGGTCCCTTAA-GCCTTCACGTGAAGTT-TC-ATGGCAAGATGACTCGTTTTCTATTT
517 -TCA-AATGCT-CTTTAAGGGGGT---GTG-AGTTCTCGA-GGTTTGATGA---G--GGATAGGG
** * * ******* * * ** *** * * * * * *****
21451265 TTCACGATTTTCGAAACTTTTTTTGGTTCGAG-A-CTTTTTAAAAT-TTTTTCGGA-AGGAGTTT
569 GGC-C-AATAT---AA--GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCC
* ** * * ** **** ** *
21451326 TGG-CCCCAAATTGGTAGACGTGATCCTTGAATTTTTGTTGCCATGCACAAAAAAATTCAGCTAA
625 CGGCCCCCCGA-TCGT---CG-GAACC-CCAA-------TGCC--GC-CGGTCAGGTT---CT-C
*** * * * * **** *** *
21451390 AAACTAGAAGTG-TAC-AAGATTTTGTGACCATTTGAA-AAAAATGTC--C-CCATTTCA-G-AC
670 CGGC--G-A-TGCTCCGACGA--TGGTGCCCCGACGAAGAAAAATG-CGGCACCAGCACATGCCC
** * * * * **** * ** **
21451447 -A-CTTTA--ATGGCTACTAGCAGCAA-ACT-TGTAAAATCTCAAATGCTCTTTA-AGGGGGTGT
728 GAGC-CCAGCAT-G-TGCT-GCCGCAACCCTCGGTCTGGTC-C----GATC-TTAGACTGGGAAT
* * * * * * **** * *
21451505 G-AGTTCTTGA-GGTTTGA-TGAGGGATAGGGGGCCAATATAAGAGCC-AAGTACCAGCAACCAT
783 GAACTCCGT-ATGCTTAGACTG-GGAAT-GAACTCC-GTAT----GCCTAAGT--CA--ACCCA-
* *** * * * * * ** * *
21451566 CGCACATCATGTGCGCACACCCCCCGGCCCCTCGATCTTCGAAACCCCAATACCGTCGGTCAAGT
835 CG-A-A--A----CG---AGCGTGCGGGCGCTC-AGC--CG----GCC-AGAGGGGCGG--GA-T
* * * ** * * *
21451631 TCTC-CGTCGATGCTCCGACGATGGT
878 GCGCAAGTCGGGGATCGGCCG--GGT
* **** * * * * * * * * *
21451656 GCCCCGAC-CAAGAAAAATGT-GACACCAGCATATGCTCG-AGCCCAGCATGTGCTGCCACAACC
1 -CCCC--CTC-TGAGTGCTGTCGA-TCCTGC---TGC-CGCAACCC-TC-GGTCCGGTC-TAA--
** * * * * * *
21451718 CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTACGCCTAAGTCAACCGACGAAAGGAG
52 -TC--T-TAGACTG-----------GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * * *
21451783 CAGACGGACGGGC-GACGGGAACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
102 C-GAGGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
*
21451847 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTG
166 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
**
21451912 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATAACTCGTTTTCTA
231 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
21451977 TTTTTTATGATTTTTGAAACATTTT-CTGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTT
296 TTTTTCATGATTTTTGAAACTTTTTGC-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTT
* *
21452041 TGG-CCAAAACCTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
360 TGGCCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
* *
21452105 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAG
424 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
21452170 TGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
489 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* *
21452235 TGATGAGGGTTAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
554 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * * *
21452300 ACCCCCCGACCCCCCGATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGTGATGCTTCGA
619 ACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGA
* * *
21452365 CGATGGTGCCCCGACGAAGAAAAATG-GGTCACCAGCACATGTCCGAGCCTAGCATGTGCTGTCG
684 CGATGGTGCCCCGACGAAGAAAAATGCGG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
*
21452429 CAACCCTCGGGCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
748 CAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21452494 TTCATATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGCGGGAT
813 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * **
21452559 GCGCAAGCCAGGGATCGGCCAAGT
878 GCGCAAGTCGGGGATCGGCCGGGT
** * * * ** ** * * *
21452583 CCCATTCTGCGTGTTGCCGATCCTGCTGCCGCAACCCTCACTCCAATCCAATCTTATATTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * * * * * *
21452648 TGAACTCCGTATGCCTATGCCAACCGATGAAACAAGCGGGCGGGCGAGCGGGTGGGCACTACGCT
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAG-GGGCGGGCGGGCGGGCACTACGCC
* * * *
21452713 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGGTAGGGTGGTAGGTGGATTTAGGTACATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* *
21452778 CATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTT
195 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
*
21452843 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGG
260 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
* * * ***
21452908 TTCGGGATTTTTTTAAATTTTTTCGGAAGGATTTTTGG-CCAAAAGCTACTTAGACGTGATCCTT
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTT
** * *
21452972 GTATTTTT-TTGGCATGTGCAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGATC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
21453036 ATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* *
21453101 AACTGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * *
21453166 CAAGTACCAGTACCCATCGTACATCATGTGCGCACACCCCTCGGCCCCCCTGATCGTCGGAACCC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGTCGGAACCC
* * ** *
21453231 CAATGCCACCGGTCAGGTTCTCTGATGATGCTCCGACGATGGTGCCGCGACGAAGAAAAATGCGG
648 CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
*
21453296 CACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC--G---G----T---CT-
713 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTG
*
21453344 -G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGA
778 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * *** * * *
21453400 GCGTGCGGGCGCTTAGCCGACCAGAGGGGCGAGATGCGCAAGTCATAGACCGACCGAGT
843 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* ** * ** * *
21453459 CCCCCTCTGTGTGCTGTCGATCCTGCTATCGGAACCCTCCATCCGGTCCAATCTTAGACTGGGAT
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
*
21453524 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG-GGAGGTCGGGCGGGCGGGCACTACGT
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGG-GG-CGGGCGGGCGGGCACTACGC
* * * **
21453588 CGACTAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGCCTTTAGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
*
21453653 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * ** *
21453718 TCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
*** * *
21453783 GTTCAAAATTTTTTTAAATTTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
21453848 GTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* * *
21453913 ATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTAGCAGCAAACCTGAAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
*
21453978 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT-GAAGGGC
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * * * * * *
21454042 CAAGTACTAGCACCCTTCGCACATCATGTGTGCAGACCCCCCCGACCCCCTGATCAT-TGAATCC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGGAA-CC
* * * ** *
21454106 CCAATGCCGCCAGTCAAG-T-T----C----C-CCGACGATGGTGCCCTGGTGAAGAAAAATGTG
647 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCG
* * * * * * *
21454160 ACACCAGCACATGACCAAGCCCAGCATGTGCTGCCACAACCCTTGGTCCGG-CCTGATCTTATAC
712 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCC-GATCTTAGAC
* * * *
21454224 TGGGAATGAACTCCATATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAAT
776 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * *
21454289 GAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCACAAG-CAGGGGATCGACCGGGT
841 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATCGGCCGGGT
* * * * * *
21454350 CCCCCTCT-ACGTACTGTCGATCCTACTACCGCAA-CCTCAGTCCGGTCCAATCTCAGACTGGGA
1 CCCCCTCTGA-GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * ** * *
21454413 ATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGAGGGCGGGCGATCGGGCGGGCACTTCAC
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAG-GGGCGGGCGGGCGGGCACTACGC
* * * *
21454478 CGACCAGAGAGACGGGATACGCAAGCCATGGACCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * * *
21454543 TCATATTTCTGCACGCCAATGCCATTTTTATGGCATGTAAATTCATACAGTGGTGCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * * ** *
21454608 TCACGTGAAGTTTCACGGCAACACGACTTGTTTTCTCTTTTTCATGATTTTCAAAACTTTTTGGG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* * * *
21454673 GTTCGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTAGCCCCAAACCTGGTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* *
21454738 GTATTTTTTTTGGCTTGCACAAAACAAA-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
389 GTATTTTTGTTGGCATGCACAAAA-AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
*
21454802 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTAAATGGCTACTGGCAGCAAACCTGTAAAATCT
453 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
*
21454867 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
518 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * * *
21454932 CCAAATACCAGCAACCATCGCACATCATGTGCGTACACCCCCTGGCCCCCCGATCGTCGGAACAC
583 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCC
* * ** *
21454997 CGATGCCGCTGGTCAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGG
648 CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
* * * * * ** *
21455062 CACTAGCACATGCCCGACCCCAGCATGTGCTGCCGTAACCCTCAGTCTGATTTGATCTTAGATTG
713 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTG
* *
21455127 GGAATGAACTCCGTATGCTTCGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGA
778 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * *
21455192 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAG-CTAGGGATCGGCTGGG-
843 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATCGGCCGGGT
* * * * *
21455250 CCCTTCTCTGCA-TG--GTACGGATCCTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTATACTG
1 CCC-CCTCTG-AGTGCTGT-C-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTG
*
21455312 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-A----------GGCAGGCACTAC
62 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTAC
* *
21455366 GCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGCAGGTGGGTTTAGGCACAT
127 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
21455431 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
192 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * ** *
21455496 CTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTA
257 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
* * * * * ** * ** *** ** *
21455561 CGATTTGGGA----ATGAACTCCGTAT-GCCTA--AG---TCAACCCAAGAAATGAGCATGCAGG
322 CGGTTCGGGATTTTTTAAAAT-TTTTTCG-GAAGGAGTTTTGGCCCCAA-ACTTG-G--T--AGA
* * *** * ** * **** * * * * * *
21455616 CGCTCAGCC--G-A--CCAG-AGGGGTG-AGATGCGTAAGTCA--T--AGAC-CGATCGGGTCCC
379 CG-TGATCCTTGTATTTTTGTTGGCATGCACA-AAAAAATTCAGCTAAAAACTCGA-AGTGTACA
*** * * * ** *** *** *
21455669 CCCTCTGTGTGCTGTCGATCCTGCTACCGGAACCCTCCA--TCCGATC-CGATCTTAGACTGGGA
441 AGAT-T-T-TG-TGACCAT-TTGAAAAAAGTGTCC-CCATTTCAGA-CAC--T-TTA-A-T-GG-
* * * ** * * * ** *** *
21455731 TTGAACT--CCGTATGCC--TAAGCCAACCGACGAAACGAGC-GGGAGGCCGGGTGGGCAGGCAC
492 CT--ACTGGCAGCAAACCTGTAA---AATC-TC-AAATGCTCTTTAAGG--GGGTGTG-A-G---
* ***** ** * * ** * *
21455791 TACGTCGACCAGAGA-GACGGGAT-GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGCCTTTAGG
543 TTC-TCGAGGTTTGATGA-GGGATAG-G-GGGCC---AAT--ATAAGG-GCCAAGTACC---A-G
* * ***** ****** *
21455854 CA--CATCTTCATATTTC-TGCATGC-CA-ATGCCATTTTTAATGCTTGTAAATTCATACAATGG
594 CACCCATC-GCACA--TCATG--TGCGCACA--CC----CCCCGGCCCCCCGA-TCGT-C---GG
* * ** * * * * * * * * ** ** *
21455914 -TCCCTTAA-GCCTTCGCGTGAAGTT-TCATGGCAAGACGACT-TGTTTTCTAT-TTTTCATGAT
643 AACCC-CAATGCCGCCG-GTCAGGTTCTC-CGGC--GATG-CTCCG---ACGATGGTGCCCCGAC
**** * ** *** * ** ***** *** ** * ** * *
21455974 TTTCAAAACTTTTTAAGTTTCAAG-ATTTTTTAAAATTTTTTCAAAAGGATTTTGGCCCCAA-AC
699 GAAGAAAA----ATGCGGCACCAGCA-CATGCCCGA---GCCCAGCATG-TGCT-GCCGCAACCC
* * * ** * * * ***** * ***
21456037 TTGGTGAACGTGATCATTGTAT-TT-GTGTTGGCATGCACAAAAAAAT--TCAG-CTAAAAACTC
754 TCGGT---C-TGGTC--CG-ATCTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTGGGAA-T-
* * ** ** * * ** * ** ** * * *** *
21456097 GAA--GCGTACAAGATTTTGT-GA-CCATTTGAAAAAAGTGT-C-CCCATTTCAGAC-ACTTTAA
809 GAACTCCGT--ATGCCTAAGTCAACCCA--CGAAACGAGCGTGCGGGC-GCTCAGCCGGCCAGAG
* * ** *** *****
21456155 TGGC--TACTGGCAGCAAACCTGTAAAATC--TAAAAT
869 GGGCGGGA-T-GC-GCAAGTC-G-GGGATCGGCCGGGT
* * * * * * * ** ** **** ** * * * *
21456189 -GCTCTTTAAGGGGGTGT-GAGTTCT-C-GAGGTTTGA-TGAGGGATAAGGGGCCAATATAAGA-
1 CCCCCTCTGA-GTGCTGTCGA-TCCTGCTGCCG--CAACCCTCGG-T-CCGGTCTAATCTTAGAC
** * * * * * * * * * ** ** ** *** **
21456248 -GCCAA-GTAC-CAGCA--CCCATCGCACATCATGTGCGGACAC-CCCCTGGCCCCCCCGATCGT
60 TGGGAATGAACTCCGTATGCCTA-AGC-CAAC-CG-AC-GAAACGAGCGAGGGGCGGGCGGGCG-
* * * ** * * ** *
21456307 CGGAACCTTAATGCC-GTCAGTCAGATTCTCCGGCAATGTTCCGGCGATG--GTGCCTCGA-CGA
119 -GGCA-C-T-ACGCCGGCCAG--AGA---GACGG-GATG---C-GC-AAGCCGTGGATCGATAG-
* **** * **** * * *** * *
21456368 AGAAAAATGTGGCACCA-GCACAAGC-CCA-AGCCCAGCAAGTGCTGCCACAAT-CC-TCTGTT-
168 GGTGGTAGGTGGGTTTAGGCAC-ATCTTCATATTTCTGC-A----TG-C-CAATGCCAT-TTTTA
** * ** * * * * * * *
21456427 TGG-TCTG-ATCTT-AGACTGGGAATGAACTCCATATG-CTTAGATTGGGAATGAACTCCATATG
224 TGGCT-TGTAAATTCATAC----AATGGTC-CCTTAAGCCTT-CA-CGTGAA-G--TTTC--ATG
* * ** ** ***** ** * *
21456488 CCTACACTGGGAATGAACTCTGTATGCCTA--AGTCA--ACCCACGAAAC---GAGC-GTGCAGG
276 GC-A-A----G-ACG-ACTC-GT-TTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGG
*** * ****** *** * *** * * ** *
21456545 --CGCTGAGCCGGCTAGAGG--GGCGGGAT-G-CACAATCCAGG--GATCGGTCGGGTCCCCCTC
331 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA-C-GT--GAT---CCT-
* * * **** * * * *
21456602 TGTGTGCTTTCGATCCT-GC-TGC-CACATCCCTCGGTCTGGTCTGATCTTAAACTGGGAA-TGA
388 TGTAT--TTTTG-T--TGGCATGCACAAAAAAAT---TC-AG-CT-A---AAAACT-CGAAGTGT
** * * ** * * * ** *** * * *** *
21456663 ACTCCG--TATGCCTAAGCCAACTGACGAAACGAG-CGAGCGGGT-GGGC-GGGT--GGGCATGA
438 AC-AAGATTTTG--TGA-CCATTTGA-AAAAAGTGTC-CCCATTTCAGACACTTTAATGGC-T-A
* ** * * * * ** *
21456721 C-GTCAGCCAAA-GAGATGAGATGCGCAAGCCATGGATCGATAGAGTGGTAGGTG-G-GTT-TAG
495 CTGGCAG-CAAACCTG-TAAAAT-CTCAA---AT-GCTCTTTA-AG-GG--GGTGTGAGTTCT-C
** * * * *** ** * * * ** **
21456781 GCACATCTTCAT-ATTTCTGCAT-GCCAATGCCGTTTTTATGG-CTTGTA--A--ATTCAT---A
548 G-AGGT-TTGATGA----GGGATAG--GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** ** ** * ***** * * ** * * *** *
21456836 CA--ATG-GTCCCTTAAGCTTC-ACATGAAGTTTCAT-GGCAAGACGACT--CG-TTTTCTA-TT
605 CATCATGTG-CGCACACCCCCCGGCCCCCCG-ATCGTCGG-AACCCCAATGCCGCCGGTC-AGGT
* ** ** ** * ** * *** * * *
21456892 TTTCACGATTTGTAAAATTTTTTGAAAGAAGTTTTAGCCCCAAACTTGAAGGACGTTATCCTTGT
666 TCTC-CG----G--CGATGCTCCG-ACG-A-TGGT-GCCCC-GAC--GAA-GA-AAAATGC-GGC
*** ** **** ** * ** ** *** * *
21456957 ATTTTTGTTGGCATG---GATAAAAAAAT-T-CAG-CTAAAAACTCGAAGT-GTACAAGATTTTG
714 A--CCAG--CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT-C-CGATCTT-
* ** ** * ** * ** * ** * * * **
21457015 TGACCATTTGAAAAAAGTGTCCCCATTTCACACACT-TTAATGGCTACTGGCAGCAAACCTGTAA
772 AGA-C-TGGGAATGAA--CTCCGTA-TGCTTAGACTGGGAAT-G-AACT--CCGTATGCC--T--
* ** * *** * * * * ** * *** * * *
21457079 AATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTC-G-AGGTTTGA--TGAGGGATAGGGGGCCA
824 AA-GTC-AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT---GCG-CA
** ** **
21457140 A-T---ATAAGGGCCAAG-
883 AGTCGGGGATCGGCCGGGT
* ** *** * * * * ** * ***
21457154 CACCAGCTCCCA-T-CCCAC-ATCATG-TG-CGCACACCCCCACGACCCCTC-GATCACCGGAAC
1 C-CC-CCTCTGAGTGCTGTCGATCCTGCTGCCGCA-ACCCTC-GGTCCGGTCTAATC-TTAG-AC
*** * * * * *** * *** * ** * ** *
21457213 -CCCAATG-CCGCCGGTTAGGTTCT---CC-GGTGATGCTCCGA-CGATGGTGTCCCGAGGAAGA
60 TGGGAATGAACTCC-G-TATG-CCTAAGCCAACCGACGAAACGAGCGA-GG-GGCGGGCGGGCGG
** * * * * * * * * * * ** *
21457271 AAAATACGGC-ACCA-ACACATGCTGGA-GC-CCAG-CAT-G-T-GCT--GCTGCG-ACCCTTGG
120 GCACTACGCCGGCCAGAGAGA--CGGGATGCGCAAGCCGTGGATCGATAGGGTG-GTA-GGTGGG
** * * * * ** * * * **
21457325 TCCAGTC-CGATCTT-AGA---CTG---G-GAATG-AACTTCGTATGCCTAAGTCAACCCATGA-
181 TTTAGGCAC-ATCTTCATATTTCTGCATGCCAATGCCA-TTTTTATGGCT-TGTAAATTCAT-AC
* * * ** * ** **** * *
21457379 AACGAGCGTGCGGGCGTTCAGCCGGC-CAGAGGGGCGGGATGCGCAAGCCGGGGATTAGTCAGGT
242 AA--TG-GT-C---CCTTAAGCCTTCAC-GTGAAGTTTCATG-GCAAGAC---G---ACTC--GT
* * ** * * * * ** *
21457443 CCCCTTCTGCGTGCTGC-CGATCCTGCTGTCACAAC--CCT-CGGTCCGGTCTGATCTTAGATTG
290 ---TTTCT--ATTTTTCATGAT--T--TTTGA-AACTTTTTGCGGTTCGG---GAT-TT---TT-
* * * * ** * **** *** * * * **
21457504 GGAATGAACTCCGTATGCCTAAGCCAACCGAT-GAAGCAAAC--GGGAG-GGTGAGCGGGCGGGT
337 -TAA--AA-T--TTTTTCGGAAG--GAGTTTTGGCCCCAAACTTGGTAGACGTGATC---CTTGT
**** * ** ***** ** * * ** * ***
21457565 GGGCTGGCGGGCGA-GCACTGCGCAAGCCAG--AGAGACGGGATA-CG--CAAG-CCGTG-GATC
391 ATTTTTGTTGGC-ATGCACAAAAAAATTCAGCTAAAAACTCGA-AGTGTACAAGATTTTGTGA-C
* ** ***** *** * * ** * * *
21457622 GATAGGGTGGTAG-GT--GGGTTT-AGGCACATCTTCAT-ATTTCT-GCATGCCAATGCCAT-TT
453 CATTTGAAAAAAGTGTCCCCATTTCAGACAC-T-TTAATGGCTACTGGCA-G-CAA-ACC-TGTA
** * * * * * * * * ** *
21457680 TTATGGCTTGTAAA--CTC-ATACA-GTGGTCCCTTAAGCCTTCACGTGAAGTTTCATG-GCAAG
512 AAAT--C-T-CAAATGCTCTTTA-AGGGGGT---GTGAG--TTCTC--GAGGTTTGATGAGGGAT
*** ** ****** * * ** ** *** * *** *
21457740 AGGACTCCTTTTCTATTTTTTACGATTTTCAAAACTTTTTTCGGTTCGAGAT--TGT-TTAAAAT
565 AGGGGGCC---AATATAAGGGCCAAGTACCAGCAC--CCATC-G--C-ACATCATGTGCGCACA-
****** *** ** * * * ** * ** ** *
21457802 TTTTTTGG---AAGGATTTTTGGCA-CCAAACTTGGTAGACGTGATCCTTGTAT-TTTGGTTGGC
620 CCCCCCGGCCCCCCGATCGTCGGAACCCCAA--T-GCCGCCG-G-T-CAGGT-TCTCCGG--CG-
*** ** *** **** * ** * *
21457862 ATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG-ACCATTTGAAAAAAG
675 ATGC-T-CCGACGATGGTGC-CCCGA--CGAA--G-A-AA-AATGCG-GCACCA---G--CACA-
* *** * * * * **** *
21457926 TGTCCCTATTTCAGACTCTTTAATGGCTACTGGCAGCAAACCT--ATAAAATCTCAAATGCCCTT
723 TG-CCCGAGCCCAG---C----AT-G-TGCT-GCCGCAACCCTCGGTCTGGTC-C-GAT---C-T
** ** ** * * * **** *
21457989 TA-AGGGGGTGTGAGTTCTCG-A-GGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCC-AAGT
771 TAGACTGGGAATGAACTC-CGTATGCTTAGACTG-GGAAT-GAACTCC-GTAT----GCCTAAGT
* * ** * * * * ** ** * *
21458049 ACCAGCACCCATC-ACAC-ATCATGTGCGCACACCCTCCGGCC-CCCCGA-TCGCTAGA-ACCCT
828 --CA--ACCCA-CGAAACGAGC--GTGCG--GGCGCT-CAGCCGGCCAGAGGGGCGGGATGCGC-
** * **
21458109 AA-T--GCCA-CTGGTCAAGT
882 AAGTCGGGGATC-GGCCGGGT
* * ** * ** * *** * *
21458126 TCTCCGGTGA-TGCTCCGACGATGGTGC-CCCGACGAAGAAAAAT-GTGAACCAG-C-ACATGC-
1 CCCCCTCTGAGTGCT--GTCGATCCTGCTGCCG-C----AACCCTCG-G-TCCGGTCTA-AT-CT
* *** * ** ** ** ** * * * * ** * ** *
21458185 TCGATCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTAGAAATGAAC--TC
55 TAGA-CTGGGAATGAACT-CCGTATGCCTAAG-CC-AACCGA-C-GAAACGAGCGAGGGGCGGGC
***** * * ** ** * * ***** ** *
21458248 -CATATGC-TTA-GACTGGGAATGA-ACTCCGTATGC-CTAAGTCAACCCATAAAATGAGCGT-G
114 GGGCGGGCACTACG-CCGGCCA-GAGAGACGGGATGCGC-AAG-CCGTGGAT-CGAT-AGGGTGG
* * * ** * *** * * **** * ** *
21458307 -CGG-GGGCTCA-GC-CGGC--CAGAGGGGCGGGATGCGCAA-GCC--GGGGATCGACCGAGTCC
173 TAGGTGGGTTTAGGCACATCTTCATA-TTTCTGCATGC-CAATGCCATTTTTAT-G-GCTTGT-A
*** ** * * * *
21458363 CCCTC-TACGTGGTGTTGATCCTTCTGCTACAACCCTCGATCCGATCTAA-TCTT-A-GACTAGA
233 AATTCATAC--AATG--G-TCC--CT--TA-AGCCTTC-A--CG-T-GAAGT-TTCATGGC-A-A
* * ** *** ***** ** * ******* *
21458424 AATGAACTTCGTATGCCTA--AGCCA--ACCGACGAAAC---GAGCGG-GCGAGCGGGCGGGCAG
280 GACG-AC-TCGT-TTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCG-G-GATTTTTTAA
** **** *** * * * * **
21458481 GCTATACGCCGGCCAGAGAGACGGGATGTG---CAAGCCATGG-ATGATAG-GGT-C--GTAGGT
340 AAT-TTTTTCGG--A-AG-GA-GTTTTG-GCCCCAA-ACTTGGTA-GA-CGTGATCCTTGTATTT
** * * ** *** * * * *
21458538 GGGTT--TAGGCAC----ATCTTCA--T-ATTTCT-G-TGTG-CCAATGCCATTTTTATG-GC-T
395 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA-G--A-TTTTGTGACCAT
* * * * * * *
21458589 TGGAAATGCATACAATGGT--CC-TTTAAG-C-CTTCACATGAAGTTTCATGGCAAG-ACGACTC
456 TTGAAA---A-A-AGT-GTCCCCATTTCAGACACTTTA-ATG--GCTAC-TGGC-AGCA-AAC-C
* * ** * * * * ** * * * ** ** * **
21458648 GTTTTCTATTTTTCACGATTTTTGAAACT-TTTTATGGTTTGGGATTTTTTAAAATTT-TTTTGG
508 --TGT-AAAATCTCA--A---ATG---CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* ** ** *** ** *** * * * ** ** * **
21458711 AACTAGTTTTGGCC-CCA-AACTTCTTAG-ATGTG-ATCC-TTGTATTTTTTTTG-GCATGCAAA
562 GA-TAG--GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA--CACC
***** ** * *** **** * ** * * * ** * * **
21458770 AAAAAG---TTC-AGC-TAAAAAGTTGAA--CTG--TATAAGATTTTGAGACCAT--T-CGAAAA
622 CCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGA
** * ** * * *** * *
21458823 AAGTGTCCCC-ATTTC-ATACACTTTAAT--GGCTACTGGTAGCAAACCTGCAAAATCTCA--A-
687 TGGTG-CCCCGA---CGA-AGA--AAAATGCGGC-AC---CAGC--ACATGCCCGAGCCCAGCAT
** *** *** * ** * * **** * *
21458881 AAGCT-CTTTAA--GGGGGTGTGAGTTCTCGAGGTTTGA-TGAGGGATAGGGGGCCAATACAAGG
739 GTGCTGCCGCAACCCTCGGTCTG-G-TC-CGATCTTAGACTG-GGAAT-GAACTCC-GT---A-T
** ** * * * * ** * **** * *
21458942 GCCAAGGACCAGCACCCATCGCACATCATGTGTG-C-ACA-TCCCCCCGGCCCCCCCGATCAT-C
794 GCTTA-GACTGGGA---AT-GAAC-TC-CGTATGCCTA-AGTCAACCC--ACGAAACGAGCGTGC
* * * *** * * * ** * *
21459003 GGAAC-CCCAATGCC-GCCGATCAAGTTCTCTGGTGATGCTCCGATAAT-GGTGCCCCGACGAAG
849 GG-GCGCTC-A-GCCGGCC-A--GAG-GGGC-GG-GATGC-GC-A-AGTCGGGGATCGGCCG--G
*
21459065 AAAAAT
900 ----GT
* * * * * * * * * *
21459071 GCAGCACCAGCACATGCCCGAGCCAAG-C-AT-GTGCTGTCACAACCCTCGGTCCTGTTTGATCT
1 -C--C-CC--CTC-TG--AGTG-C-TGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCT
* *
21459133 TAGACTGGGAATGAACTCCGTATGTCTAAGCCAACCGACGAAACGA--GA-----GGGAGGGCGG
55 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGG
21459191 GCACTAC-CTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
120 GCACTACGC-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * *
21459255 AAGCACATCTTCTTATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAGTTCATACAATGGCC
184 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
21459320 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTTGAA
249 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* *
21459385 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGTCCCAAACTTGGTAGA
314 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
21459450 TGTGATCCTTGTACTTTTT-TTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAG
379 CGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
21459514 ATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACT
443 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
21459579 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
508 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * * * * *
21459644 AATGTAAGGGTCAAGTACGAGTACCCATTGCACATCATGCGCGCACACCCCCCGCCCCCCCGATC
573 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
* * *** * * * * **
21459709 GCCTGAACCCCAATGCCATTGGT-AGGTTCTCCGACGATGCTCTGGCGATGGTTCCCCGGTGAAG
638 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAG
* * * *
21459773 AAAAATGTGGCACCAGCGCATGCCTGAGCCCAGCATGTGCTGCTGCAA-CC-C--T-T-G---G-
703 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGA
*
21459828 -C-----C------TG-A-TCCG-AT-CTTAGACTGGGAAAGAACTCCGTATGCCTAAGTCAACC
768 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
** ** * * * *
21459877 CACGAAATAAGCGTGCGGTTGCTCAACCGGCCAGAGGGGCGGAATGCGCAAGCCGGGGATCGGTC
833 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCC
21459942 GGGT
898 GGGT
* * ** * * * * *
21459946 CCCCCTCT-ACGTGGTGTCGATCCTTCTGTTGCAACCCTCGATCCGATCTGATCTTAGACTAGCA
1 CCCCCTCTGA-GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * * * * *
21460010 ATGAACTCCTTATGCCTAAGCCAACCGATGAAA-TAACGGGCGGGCGGGCGGGCGGGAACTACGT
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAG-GGGCGGGCGGGCGGGCACTACGC
* * * *
21460074 CGGCTAGAGAGACGGGATGCGTAAGACGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
*
21460139 TCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * *
21460204 ACACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTGAG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* * **
21460269 GTTCGAGATTTTTTAAAAGTTTTTCGGAAGGAGTTTTGGCCCCAAACTTTTTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
*
21460334 GTATTTTTGTTGGCATGCACAAAAAAATTCAAG-TAAAAACTCGAAGTGTACAAGAATTTGTGAC
389 GTATTTTTGTTGGCATGCACAAAAAAATTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
*
21460398 CATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
453 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * *
21460463 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGATTTGAAGAGGGATAGGGGGCCAATATAAGGG
518 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
*
21460528 CCAAGTACCAGCACCCATTGCACAT-ATGTGCGCACACCGCCCCCGGCCCCCCCGATCGTCGGAA
583 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCCGG-CCCCCCGATCGTCGGAA
* ** *
21460592 CCCCAATGCCGTCGGTCAGGTTCT-C--CGA---T-----GATGGTGCCCTAACAAAGAAAAATG
645 CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATG
* * * *
21460646 CGGCACCAGCACATGCCCGAGCCCAACATGTGCTACTGCAA--C-C---C---TCAG-TC-----
710 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGA
*
21460696 C---G-AT---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAA
775 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * ** * ** * * * **
21460750 -GTAGCGTGTGGACGC-CAGTTGGCCAGAGGGACGGGATTTGCAAGCCGGTGATCAGTTGGGT
840 CG-AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * * * ** **
21460811 CCCCCT-TTACGTGCTGCCGATCCTGCTACCGCAACCCTTGGTCCAATCCGA-CTTAGACTGGGA
1 CCCCCTCTGA-GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * * * * *
21460874 ATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGCGGATGGACGGGCGGACGGGAACTACGT
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GAGGGGCGGGCGGGCGGGCACTACGC
* * *
21460939 TGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGTGTGGTAGGTGGGTTTAGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
***
21461004 TCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * ** **
21461069 ACACTTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTATG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* ** * **
21461134 GTTCGAGATTTTTTAAAGGTTTTTCAGAAGGAGTTTTGGCCCCAAACTTTTTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * *
21461199 GTATTTTTATTGGCATGCACAAAAAAATTCAGGTAAAAACTTGAAGTGTACAAGATTTTGTGACC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
21461264 ATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * * *
21461329 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTCGATGAGGGATAAGGGGCTAATATAAGGGT
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
*
21461394 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATC-ACTGGAAC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGTC-GGAAC
* * * * * * * ** *
21461458 CTCGATGCCGCCGATCAAGTTCTCCAGTGATGCTTCGACGATGGTGCCCCGGTGAAGAAAAATGT
646 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* ** * * * *
21461523 AGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTTGCAACCCTCGATCCGATCTGATCTTAGAC
711 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGAC
* * *
21461588 TGGCAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAAC
776 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * * **
21461653 GAGCGTGCCGGCGTTCCA-CCGGCAAGAGGTGCGGGATGCGCAAGCCAGGGATCGGCCATGT
841 GAGCGTGCGGGCGCT-CAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * *
21461714 -CCCC-C----T-CTG-C-A---TGCTGCCGTAACCCTCGATCGGGT-TCAATCTTAGACTGGGA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCT-AATCTTAGACTGGGA
* * *
21461766 ATGAACTCCATATGCCTAAGCCAACCGAGGAAACTAGC---GGGCGGGCGGGCGGGCACTACAG-
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTAC-GC
* * ** *
21461827 CGGCCAGAGAGACGGGATGCGCAAGCTGTGAATCGATAGGGTGGTAGGTGATTTTAGGCACATCC
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
*** * *
21461892 TCATATTTCTATGTGCCAATACCAATTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* **
21461957 TCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAAG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* *
21462022 GTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * * * *
21462087 CTACTTTTATTGGCATGCACAAAAAACTTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* * *
21462152 ATTTGAAAAAACTGTCCTCATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * * * *
21462217 AAATGCTCTTTAAGAGGGCGTGAGTTCTTGAGGTTTGATGAGGGACAAGGGGCCAATATAAGGGC
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
*
21462282 CAAGTACCAGCACCCATTGCACATCATGTGCGCACACCTCCCCGGCCCCCCCGATCGTCGGAACC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCGG-CCCCCCGATCGTCGGAACC
* * * * * * *
21462347 CCAATGCCGTCGGTCAGGTTGTCCGACGATGCTCCGGCCATGGTGCCTCGACGAAGAAAATTGCG
647 CCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCG
* * * * * * * *
21462412 GCACCAGCACATACCCAAACCCAGTATGTGCTGTCACAACCCTCAGTCTGGTCCAATCTTAGACT
712 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACT
* * * *
21462477 GGGAATAAACTTCGTATGCTTAGACTGGGAATGAACCCCGTATGCCTAAATCAACCCACGAAACG
777 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * ** *
21462542 AGCGTGCGGGCGCTCAGCCGTCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAACTGGGT
842 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* ** * * * * *
21462602 CCCCCTCTGATTGCTACCGATCCTGCTGCCACAACCCTTGGTCTGATCTGATCTTAGACTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * *
21462667 TGAACT-CGTATGCCTAATCCAACCGACGAAACGAGCG-GGCGAGCGGGCGGGCAGGCACTACGT
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGG-G-GCGGGCGGGCGGGCACTACGC
* * * *
21462730 CGGCCAGAGAAACGGGATGTGCAAGCCGTTGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
*
21462795 TCATATTTCTGCATGCCAATGCCATTTCTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * *
21462860 TCACATGAAGTTTAATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* * *
21462925 GTTCGGGATTTTTTAAAAGTTTTTT-GAAAGGAGTTTTGGTCCCAAACTTGGTAGAAGTGATCCA
324 GTTCGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-
*
21462989 TT-TATTTTTGTTGGCACGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
387 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
*
21463053 CCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
452 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
21463118 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
517 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
21463183 GCCAAGTA-CAGCACCCATCGCACATCATGTGCGCACACCCCCCTCGGCCCCCCCGATTGCCGGA
582 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGG-CCCCCCGATCGTCGGA
* * ** * *
21463247 ACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGTTTTTGCCCTGACAAAGAAAAAT
644 ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT
* * * ** * ** **
21463312 GCGGCACCAGCATATGCTCGAGCCCAGTATGTGCTGTGGGAACCCTTAGTCCAGTCCGATCTTAG
709 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAG
* * **
21463377 ACTGGGAATGAACTCCGTATGCTTAGACTGGGGATGAAATCTATATGCCTAAGTCAACCCACGAA
774 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* *
21463442 ACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAG-CGGGGGATCGGCCGGGT
839 ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATCGGCCGGGT
* * * *
21463505 CCCCCTCT-ACGTGCTGCCGATCCTGCTGCCACAACCCTTGGTCCGGTCCAATCTTAGACTGGGA
1 CCCCCTCTGA-GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * * ** * *
21463569 ATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGAGCGGGCGAACACTTCGT
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAG-GGGCGGGCGGGCGGGCACTACGC
* * * * *
21463634 CGGCCAGAGAGACGGGATGCGCACGCCGTGGATAGATAGGGTTGTTGGTGGGTTTAGGTACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* *
21463699 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAAACCATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * * *
21463764 TCACGTTAAGTTTCAAGGCAAGACGACTCATTTTCTATTTTTCAGGATTTTCGAAACTTTTTGCG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
** ** *
21463829 GTTCAAGATTTTTTAAAATTATTTT-GGAAGGAGTTTTGAACCCAAACTTGGTATACGTGATCCT
324 GTTCGGGATTTTTTAAAATT-TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* *
21463893 TGTATTTTT-TTTGCTATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
388 TGTATTTTTGTTGGC-ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
21463957 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
452 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * *
21464022 TCAAATGCTATTTAAGGGGGTGTGAGTTCTCGAGGTTTGATTAGGGATA-AGGGCCAATATAAGG
517 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * *
21464086 GCCAAGTACCAACACCCATCACACATCATGTGCGCACACCCCCCGGCTCCCCCGATCGTCGGACC
582 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC-CCCCCGATCGTCGGAAC
* ** ** * *
21464151 CCCAATGCCGTCGGTCAGGTTCTCTAGCGATGCTCCGGTGATGGCGCCCCGACGAAGAAAAATGT
646 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* * ***
21464216 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCATTCCGATCTTAGAC
711 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGAC
* * * *
21464281 TGGGAACGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCAATGAAAC
776 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * *
21464346 GAGCATGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCCTGGT
841 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * ** * * * *
21464407 CCCCCTCTGCGTGCTG-CTGATCCTGCTACTACAACCCTCAGTTCGGTCCAATCTTATACT-GGA
1 CCCCCTCTGAGTGCTGTC-GATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGA
* * * * * *
21464470 ATTAACTCCGTATACCTAAGCTAACTGATG-AA--A-CGA-------GCGGGCGGGCATTACGCC
65 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCC
* *
21464524 GGCCAGAGAGACGGGATGCGCAAGCCTTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
130 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* ** * * *
21464589 CATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGCCCCATAAGCCTT
195 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * * *
21464654 CACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCATAATTTTTTAAACTTTTTACGG
260 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
* * *
21464719 TTTGGGATTTTTTAAAA-TTTTTCGGAAGTAGTTTTGGCCCCGAACTTGGTAGACGTGATCCTTG
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
*
21464783 TATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
390 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
21464848 TTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACT-GCAGCAAACCTGTAAAATCTTA
455 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
21464912 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCC
520 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
21464977 AAGTACCAGCAGCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCTGATCG-CTGGAACCT
585 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGTC-GGAACCC
** * * * *
21465041 CAAT---G-CGGTC-GG---T-C-AAG-TTCTCCGACGATGGAGCCTC-AGCGAAGAAAAATACG
648 CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCG
* *
21465094 GCACCAGCACCTGCCCGAGCCCAGCATGTG-TGGCTGCAA--C-C---C---T-CGATC-----C
712 GCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCCGCAACCCTCGGTCTGGTCCGATCTTAGAC
* ** *
21465143 --GG--T----T-CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTTAGTCAACCCAAAAAAT
776 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * * * **
21465197 GAGCGTGCGGGTGCTCAGCCGACCAAAGTGGTGGGATGCGTAACTCGGGGATCGATC-GGT
841 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * * ** * * * *
21465257 CCCCCTCTGCGTGCTGCCGATCCTACTATCGCAACCCTCGGTCTGGTCTGATATTAGATTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * * *
21465322 TGAACTCCGTATACCTAAGCCAACCGAAG-AA--A-CGA---GCGGGCGGGCAGGCACTACGCCT
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
* * * * *
21465380 GCCAGAGAGACGTGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGCTTTAGGCTCGTCTTC
131 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
21465445 ATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
196 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * *
21465510 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG-CTTTTAAAACTTTTTACGGC
261 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGT
* *
21465574 TCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGT
326 TCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * * * * *
21465639 ATTTTTGTTGGCATTCAAAAAAAAATTCAGCTAAAACCTCAAAGTATACAATATTTTGTGACCAT
391 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
** *
21465704 TTGAAAAAAGTGTTTCCATTTCAGACACTTTAATGGCAACTGGCAGCAAACCTGTAAAATCTCAA
456 TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
* ** **
21465769 ATGCTCTTTAAGGGGGTCTGAGTTCTCGAGGTTTGACAAATGATAGGGGGCCAATATAAGGGCCA
521 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * *
21465834 AGTACCAGCACCCATCGCACATCAAGTGCACACACCCCCCCGGCCCCCTCGATCGTCGAAACCCC
586 AGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCC-CGATCGTCGGAACCCC
* * * *
21465899 AACGCCGTCGGTCAGGTTCT-C--CG--G-T-----GATGGTGCCCCGATGAAGAAAACTGCGGC
649 AATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * * *
21465953 ACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGAT-CGAATCTTTGACTG
714 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCG-ATCTTAGACTG
* * * *
21466017 GGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCATATGCCTATGTCAACCCACGAAATGA
778 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * *
21466082 GCG-GCGGGCGCTCAACCGGCCAGAGGGGCGAGATGCGCAAGTAGGGGATCGGTCGGGT
843 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
* * * * * *
21466140 CCCCCTCT-ACGTGCTGTCGATCCT-CTTGCCACAACCCTCAGTCTGATCTGATCTAAGACTGGG
1 CCCCCTCTGA-GTGCTGTCGATCCTGC-TGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGG
* * * * *
21466203 AATAAACTCCATATGCCTAAGCCCACCGACGAAACGAGC-A--GGCGGGCGGGCGGGCACTATGT
64 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGC
* * *
21466265 CGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTGGGCACATCT
129 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
**
21466330 TCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
194 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * *
21466395 TCACGTGAAGTTTCATGGAAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTATGCG
259 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* * * *
21466460 GTTTGAGATTTTTTAAAATTTTTT-GGAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTT
324 GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
* * *
21466524 GTATTTTAGTTGTCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACC
389 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
*
21466589 ATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
* * *
21466654 AAATGCTCTTTAAGGGGGTGCGAGTTCTCGAGGTTTGGTGAGGGATAGGTGGCCAATATAAGGGC
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * *
21466719 CAAGTACCAGCACCCATCGTACATCATGTGTGCACACCCCCATCGGCCCCCCCGATCGCCGAAAC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC--CGG-CCCCCCGATCGTCGGAAC
* * * *
21466784 CCCAATGCCGCCGATCAGGTTCTCCAGAGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGC
646 CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGC
* * * * * * *
21466849 GGCACCAGCACATGCCCGAGCCCAGCATGTACTGCTGAAACCCTCGATCCGGTCTGATCTTAGAG
711 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGAC
* * *
21466914 TGGGAATGAACTCCGTATGCTTAGAGTGGGAATGAACTCTGTATGCCTAGGTCAACCCACGAAAC
776 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * *
21466979 GAGCGTGCGGGCGTTCAACCGGCCAGAGGGGCAGGATGCGCAAG-CTTGGGATCGGCCGAGT
841 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATCGGCCGGGT
* * * * * * * *
21467040 -CCCCTCTGTGTGCTGCCGATCTTGCTACCCCAACCCTCGATCTGGTCTGATCTTAGACT-GGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * *
21467103 TGAGCTCCGTATGCCTAAGCCAACCAACGAAACGAGC-A------GGCGGGAGGGCACTACGCCG
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
* * *
21467161 GCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGTTGGCAGGTGGGTTTAGGCACATCTTC
131 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * *
21467226 ATATTTCTGCGTGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTC
196 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * * ** *
21467291 ACGTGAAGTTTCATGGCAAGATGACTCGTTGTCTATTTTTCACGATTTTCAAAACTTTTTTGCAG
261 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC-TTTTTGCGG
* * * * *
21467356 TTTGGGATTTTTAAAAATTTTTTCAGAAGGAGTTTTAGCCCCAAACTT-GTAGATGTGATCCTTG
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* *
21467420 TATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCA
390 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
21467485 TTTGAAAAAAATGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCA
455 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
21467550 AATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCC
520 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
*
21467615 AGGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCC
585 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCC
* ** * * * *
21467680 ATTGCCGTTGGTCAGGTTCTCCGGGGATGCTCCGACGATGGTGCCACAATGAAGAAAAATGCGGC
649 AATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * *
21467745 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGATCCGGTCTGATCTTAGACTGG
714 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGG
* *
21467810 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTTAACCCACGAAACGAG
779 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* *
21467875 CGTGCGGGCTCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CTGGGGATCGGTCGGGT
844 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTC-GGGGATCGGCCGGGT
* * * ** * * ** *
21467933 CCCCCTCTGCGTGCTGCCGATCCTGCTGGCATAACCCTTGGTCTGGTCCGATCTTAGACTAGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * *
21467998 TGAACTCCGTATGCCTAACCCAACCGACGAAACGA--G-TGGGCGGGCGGGC--G--CTACGCCA
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
* * *
21468056 GCCAAAGAGACGGGATGCGCAAGCCGTGGATCTATAGGGTGGTAGGTAGGTTTAGGCACATCTTC
131 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
*
21468121 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTC
196 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* **
21468186 ACGTGAAGTTTCATGGCAAGACGGC-CTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGG
261 ACGTGAAGTTTCATGGCAAGACGACTC-GTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGG
* * *
21468250 TTCGAGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGGTCCTTG
325 TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
*
21468314 TATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTC-AATGTGTACAAGATTTTGTGACC
390 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACC
* *
21468378 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACTTGTAAAATCTC
454 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
21468443 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
519 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC
* * * * * * *
21468508 CATGTATCAGCACCCATCGCATATCATGTGCACACACTCCCCGACCCCCCCGATCGCCGGAACCC
584 CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCCCGATCGTCGGAACCC
* * * * *
21468573 CAATACCGGCAGTCAGGTTGT-C--CG--G-T-----GATGGTGCCCCGACGAAG-AAAATGTGG
648 CAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
*
21468626 CACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAA--------C----CC--TC---GA-T-
713 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTG
* *
21468672 ---ATG-A-TCC-TAT-CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGGAACGA
778 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * * *
21468730 GCGTGCGGGTGCCCAACCGGCTAGAGGGACGGGATGCGTAAGT-GAGGGATCGGTCGGGT
843 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCG-GGGATCGGCCGGGT
* * * * * * * **
21468789 CCCCCTCTGCGTGCTGCCGATCCTACTACCACAACCCTTGGTCCGATCCGATCTTAGACTGGGAA
1 CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
* * *
21468854 TAAACCCCGTATGCCTAAGCCAACCGATGAAACGAGC
66 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC
21468891 AGGTGGGCAC
Statistics
Matches: 19144, Mismatches: 3870, Indels: 2943
0.74 0.15 0.11
Matches are distributed among these distances:
850 49 0.00
851 120 0.01
852 2 0.00
853 2 0.00
854 33 0.00
855 316 0.02
856 294 0.02
857 81 0.00
858 7 0.00
859 2 0.00
860 7 0.00
861 5 0.00
862 4 0.00
863 1 0.00
864 47 0.00
865 654 0.03
866 138 0.01
867 72 0.00
868 124 0.01
869 12 0.00
870 2 0.00
871 9 0.00
872 71 0.00
873 415 0.02
874 466 0.02
875 135 0.01
876 584 0.03
877 283 0.01
878 10 0.00
879 13 0.00
880 5 0.00
881 15 0.00
882 103 0.01
883 168 0.01
884 18 0.00
885 10 0.00
886 26 0.00
887 621 0.03
888 996 0.05
889 277 0.01
890 1041 0.05
891 236 0.01
892 405 0.02
893 629 0.03
894 1065 0.06
895 1458 0.08
896 44 0.00
897 64 0.00
898 242 0.01
899 387 0.02
900 486 0.03
901 765 0.04
902 1122 0.06
903 1090 0.06
904 541 0.03
905 6 0.00
906 8 0.00
907 5 0.00
908 3 0.00
909 9 0.00
910 8 0.00
911 30 0.00
912 13 0.00
913 173 0.01
914 3 0.00
915 3 0.00
917 5 0.00
918 449 0.02
919 35 0.00
920 9 0.00
921 45 0.00
922 28 0.00
923 16 0.00
924 35 0.00
925 54 0.00
926 53 0.00
927 142 0.01
928 47 0.00
929 35 0.00
930 27 0.00
931 40 0.00
932 36 0.00
933 30 0.00
934 38 0.00
935 23 0.00
936 39 0.00
937 55 0.00
938 65 0.00
939 82 0.00
940 27 0.00
941 31 0.00
942 36 0.00
943 14 0.00
944 25 0.00
945 15 0.00
946 25 0.00
947 27 0.00
948 16 0.00
949 8 0.00
950 10 0.00
951 11 0.00
952 23 0.00
953 27 0.00
954 27 0.00
955 23 0.00
956 25 0.00
957 29 0.00
958 38 0.00
959 35 0.00
960 45 0.00
961 43 0.00
962 38 0.00
963 32 0.00
964 41 0.00
965 35 0.00
966 39 0.00
967 26 0.00
968 23 0.00
969 35 0.00
970 29 0.00
971 40 0.00
972 22 0.00
973 26 0.00
974 24 0.00
975 17 0.00
976 18 0.00
977 12 0.00
978 13 0.00
979 21 0.00
980 20 0.00
981 36 0.00
982 13 0.00
983 14 0.00
984 36 0.00
985 20 0.00
986 17 0.00
987 11 0.00
988 7 0.00
989 23 0.00
990 27 0.00
991 321 0.02
992 54 0.00
993 20 0.00
994 22 0.00
995 13 0.00
996 2 0.00
997 6 0.00
998 5 0.00
999 5 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (901 bp):
CCCCCTCTGAGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTAATCTTAGACTGGGAA
TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGAGGGGCGGGCGGGCGGGCACTACGCCG
GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGT
TCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAA
TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGA
ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGCCGGGT
Found at i:21447912 original size:26 final size:26
Alignment explanation
Indices: 21447883--21447935 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21447873 CCAATCCGAT
*
21447883 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21447909 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21447935 C
1 C
21447936 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21448847 original size:26 final size:26
Alignment explanation
Indices: 21448770--21448848 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 26
21448760 CCGGTCCGAT
* *
21448770 CTTAGACTGGGAATGAACTCTGTATT
1 CTTAGACTGGGAATGAACTCCGTATG
*
21448796 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21448822 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21448848 C
1 C
21448849 CTAAGTCAAC
Statistics
Matches: 49, Mismatches: 4, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 49 1.00
ACGTcount: A:0.27, C:0.19, G:0.24, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21451025 original size:890 final size:890
Alignment explanation
Indices: 21443542--21455559 Score: 12434
Period size: 890 Copynumber: 13.3 Consensus size: 890
21443532 TACGTCCTGT
* * ** *
21443542 CGATCCTACTACCGCAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATTAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
21443607 AGCCAACCGATGAAACAAGCAGGCGGATGGTTCGACGGGCACTACGCCAGCCAGAGAGACGGGAT
66 AGCCAACCGAAGAAAC--G-A-GCGGACGG---G-CGGGCACTACGCCGGCCAGAGAGACGGGAT
** ** *
21443672 GCGCAAGTTGTTCATCGATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCTGCATGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
21443737 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * *
21443802 CAAGACGACTCGTTTTTTGTTTTTCATGATTTTTGAAACTTTTTGCTGTTCGAGG-TCTTTTAAA
253 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCG-GGATTTTTTAAA
* * * *
21443866 ATTTTTTCGAAAGGATTTTTGGCCCAAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATG
317 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * * * *
21443931 CACAAAAAAATTCAACAAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGGCC
382 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
21443996 CCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAAAGCTCTTTAAGGGG
447 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
21444061 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
512 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
21444126 CGCACATCATGTACGCACACCCCCCCGGTCCCGCCGATCGCCGGAACCCCAATGCCGCCGGTCAG
577 CGCACATCATGTGCGCACA--CCCCC-G-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * * * * * *
21444191 GTTCTCCGACGATGCTCCGATGATGGTACCCCGATGAAGAAAAATACGACACCAGCACTTGCCCA
638 GTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCGA
* * * ** * *
21444256 GCCCAGCATGTGCTACTGCAACCATCGGTTTGGTCTGATCTTAGACTGGGAATGAACTCCTTATG
703 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTATG
* * * * ** *
21444321 CTTAGACTGGGAATGAACTCCGTATGCCCAAGTCAACCCATGAAATGAACGTATGGGTGCTCAGC
767 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * **
21444386 CGGCCAGAGGGGTTGGATGCGTAAGCTGGGGATCGGCCGGGTCCCCCTCTATGTGCTATC
832 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTA-C
* * * *
21444446 C-ATCCCGCTGCCGCAACCTTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* ** * * * *
21444510 AGCCAACCGACA-AAACAAGCGGGTGGGCAGGCATTACGCCGGCCAAAGAGACAGGATGCGCAAG
66 AGCCAACCGA-AGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* **
21444574 CCGTGGATCGATAGGGTGCTAGGTGGGTTTAGGGTCATCTTCATATATT-TGCATGCCAATGCCA
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCA
* *
21444638 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTGAAGCCTTCACGTGAAGTTTCATCGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
21444703 AACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTAGGGATTTTTTAAAATTTTTT
259 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* ** * *
21444768 CGGAGGGAGTTTTGGCAACAAACTTGGTAGACATGATCCTTGTATTATTGTTGGCATGCACAAAA
324 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
21444833 AAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
389 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
21444898 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAG
454 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * * * *
21444963 TTTTCAAGGTTTGATGAGGGATAGGGGGCCATTAAAAGGGCCAAGTACCAGTACCCATCACACAT
519 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
21445028 CATGTGCGCACACCCCTCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-
584 CATGTGCGCACA-CCC-CC-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * * * *
21445092 AGTGATTCTTCGGCGACGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAACCCAG
646 A-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-GAGCCCAG
** * * * *
21445157 CATGTGCTGCCGCAACCCTCAATCCAGTCCGATCTTAGACTGGTAAGGAACTCCGTATGATTTGA
709 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG-AATGAACTCCGTATGCTTAGA
* * * * *
21445222 CTGGGAATGAACGCCGTATGCCTAAGTCAACCCATGAAACGAGTGTGCGGGCACTCAACCGGCCA
773 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * *
21445287 GAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTAT
838 GAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
* * * * * * * *
21445340 CGGTCATGCTACCACAACCCTCGATCCGGTTTGATCTTAGACTAGGAATGAACTTCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * ** **
21445405 AGCCAACTGACGAAACAAGCGGGCGGGTAGGCACTACGCCGGCCAGAGAGACAAGATGCGCAAGC
66 AGCCAACCGAAGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
**
21445470 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGGTCATCTTCATATATT-TGCATGCCAATGCCAT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCAT
* *
21445534 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGTAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
21445599 ACACGTTTTCTATTTTTCATGATTTTTGAAAATTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-
260 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
* ** * ** *
21445663 TGAAGGGAGTTTTGGCAACAAACTTGGTAGACATGATCCCCGTATTTTTGTTGGCATGCACACAA
325 GGAA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
21445728 AAATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
389 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
21445792 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
454 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
21445857 TTTTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCACACAT
519 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
21445922 CATGTGCGCACACCCCCGGCCCCCCTATCGTCGGAACCCCAATGCTGTCGGTCAAGTTCTTCGGC
584 CATGTGCGCACACCCCC-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * *
21445987 GATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCATATGCCCAAGCCCAGCAT
648 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCGAGCCCAGCAT
* * * * **
21446052 GTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGATAATGAGCTCTATATGCTTAGACTG
712 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG-GAATGAACTCCGTATGCTTAGACTG
* *
21446117 GGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGCTCAACCGGCCAGAG
776 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAG
* * *
21446182 GGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGC
841 GGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
* * * * * *
21446232 CCATCCTGCTGCTGCAACCCTCGGTTCAGT-TAGATCTTAGACTGGGAATGAACTACGTATGTCT
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCT
* *
21446296 AAGCCAACCGACGAAACGAGCGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
65 AAGCCAACCGAAG-AA--A-CGA----GCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* * * *
21446361 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTCAAGCACATCTTCATATTTCTACGTGCC
122 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
*
21446426 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTGATG
187 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * * *
21446491 GCAAGAGGATTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
252 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAA
* ** *
21446556 ATTTTTTCGGAAGGAGTGTTATCCCCAAACTTGGTAGACGTGATCCTTTTTATTTTTGTTGGCAT
317 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCAT
* * *
21446621 GCACAAAAAAATTCAGCTAAAAACTCGTACTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTC
381 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
21446686 CCCATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTATAAAATCTCAAATGCTCTTTAAGGT
446 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* *
21446751 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAAGGCCAAGTACCAGCACCCA
511 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* *
21446816 TCGGACATCATGTGCGCACACCCCCCGGCCCCCACGATCGTCGGAACCCTAATGCCGCCGGTCAG
576 TCGCACATCATGTGCGCACA-CCCCC-GCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAG
* ** * * *
21446881 GTTCTTCGGTGATGCTCCGACGATGATGCCCAG-CGAAGAAAAATACGGCACCAGCACATGCCCG
638 GTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCG
* * * * *
21446945 ATCCCAGCACGTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTCGTAT
702 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTAT
* * **
21447010 GCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCAAGAAACGAGCGTGCGGTTGCTCAG
766 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * **
21447075 -CGGACCAGAGGGGCGGGATGCACAAGTCGGGGATCAGTCGGGTCCCCCTCT-AGTGCTGT
831 CCGG-CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
* * * ** * **
21447134 CGATCTTTCTGTCGCAACCCTCGGTTTGGACCAATCTTAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* *
21447199 AGCCAACCGACGAAACGAGCGGGCGGGTAGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGAT
66 AGCCAACCGAAGAAACGA----GC-GG-A--CGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * **
21447264 GCACAAG-CGTGGATCGATAAGGTGGTAGGTGGAATTAGGCACATCTTCATATTTCTGCATGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* *
21447328 ATGCCATATTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *
21447393 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
253 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * * * * *
21447458 TTTTTTCGAAAGAATTTTTGGCCCCAAACTTGGTAGACGTGATACTTGTATTTTTTTTGACATGC
318 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * * * * * * *
21447523 CCGAAAAAATTCAGCTAAAAACTCAAAATGTAAAAAAATTTGTGGCCATTTGAAAAAAGTGTCCC
383 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
21447588 CATTTCAAACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTATAA-GGGG
448 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* *
21447652 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATCAACACCCATC
513 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * *
21447717 GCACATCATGTGGGCACACCCCCTGCCCCCCGATCGTTGGAACCCCAATGCTGCCAGTCAGGTTC
578 GCACATCATGTGCGCACACCCCC-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
* * * *
21447782 TTCGACGATGCTCTGATGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCC
642 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCGAGCC
* * * **
21447847 CAGTATGTGCTACCGTAACCCTCGGTCCAATCCGATCTTAGACTGTGAATGAACTCCGTATGCTT
706 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG-GAATGAACTCCGTATGCTT
*
21447912 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCGG
770 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * * * ** *
21447977 CCAAAGGGGCAGGATGAGCATGTCGGGGATCGGTTGGGTCCCCCTCTGCGAGCTAC
835 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
* * * *
21448033 CAATCCTGCTGCCACAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * * *
21448098 AGCTAATCGACA-AAACGAGCGGGCGGGCAGGCACTACGCTGGCCAAAGGAGAAGGGATGCGCAA
66 AGCCAACCGA-AGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGA-GAGACGGGATGCGCAA
* * * * **
21448162 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTCGGCACAACTTCATATTTCTACGTGCCAATAACA
129 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
21448227 TTTTTATGGCTTGTAAATTCATACAGTGGTACCTTAAGCCTTCACGTGAAGTGTCATGGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
21448292 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTCTAAAATTTTTT
259 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * *
21448357 CAGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCATAAAA
324 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
21448422 AAATTCAGCTAAAAACTGGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
389 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
21448487 AGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAG
454 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
21448552 TTCTCAAGGTTTGGTGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
519 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
21448617 CATGTGCGCACA------CCCCCCGACCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
584 CATGTGCGCACACCCCCGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
* * * * ** *
21448676 ATGCTCC-AGCGATGGTGCCCTGGCAAAGAAATATGCATCACTAGCACATGCCTGAGCCCAGCAT
649 ATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-GAGCCCAGCAT
*
21448740 GTGCTACCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATTCTTAGACTT
712 GTGCTGCCGCAA-CC-C--T-C-G---G-TC-----C--GG--T---C-C-G-A-TCTTAGAC-T
* *
21448805 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCGCGGAACGA
750 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * * *
21448870 GCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATACGCAAGCTGGGAATCGGTCGAGTCCCCTT
815 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCT
**
21448935 CTGCGTGCTGT
880 CTGCGTGCTAC
* * * * * *
21448946 TGATCCTGCTGTCGCAACCCTCAGTCCGGTCTGATCTTAGACT-GGAA-AAACTCTGTACGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * **
21449009 AGCCAACCGACAAAACGAACAGGCAGACGGACGGGCGGGCACTACACCAACCAGAGAGACGGGAT
66 AGCCAACCG----AA-GAA-ACG-AG-CGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * *
21449074 GCGCAAGCCGGGGATCGATAGGGTGGGAGGTTGGTTTAGGCACATCTTCATATTTCTGCATGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* *
21449139 ATGCCATTTTTATGGCTTGTAAATTCAGACAATGGTCCCTTAAGCCTCCACGTGAAGTTTCATGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *
21449204 CAAAACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTCAAA
253 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * * * ** *
21449269 TTTTTTTGAAAGGATTTTTTGCCCCAAACTTTTTAGACGTGATCCTTGTATTTTTTTTGGCATGC
318 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
21449334 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
383 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
21449399 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTATA-GGG
448 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA-AGGGG
* *
21449463 GTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAGGGGCCAAGTACCAGCACCCAT
512 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * ** *
21449528 CGCATATCATGAGCACACACCCCCTGGCCCCCCTGATCGTCAAAACCCCAATGCCGTCGGTCAGG
577 CGCACATCATGTGCGCACACCCCC--GCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * * *
21449593 TTCTCCGGCGATGCTCCGAAGATGGTGCCCCGACGAAGAAAAATGTGACACCAGCACATGCCCGA
639 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCGA
*
21449658 GCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACT-G---GAA------ATG-
703 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGAATGAACTCCGTATGC
* * * *
21449712 --A-AC------T---CT--GTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGATTAGCC
768 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * ** *
21449763 GGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACCTTGTCACCCTCTGCGTGCTAC
833 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
* * * * * *
21449821 CGATCCTGCTGCTGTAACCCTTGGTCTGGTCTGATCTGAGACTGGGAATGAACTCCATATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* *
21449886 AGCGAACCGATGAAACGAGCAGG-CGGGCGGGCAGGCACTACGCCGGCCAGAGAGACGGGATGCG
66 AGCCAACCGAAGAAACGAGC-GGACGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCG
* *** *
21449950 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTATGTGCCAATC
126 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* *
21450015 CCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGTC-
191 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG-CA
* * *
21450079 AGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
255 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATT
** ** * * *
21450144 TTTTCCAAAGGAGTTTTCACCCCAAATTTGGTAGACGTGATCCTTTTATTTTTTTTGGCATGCAC
320 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
21450209 AAAAAAATGCAGCCAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
385 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
21450274 TTTCAGACACTTTAATAGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
450 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
21450339 TTAGTTCT-GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCCAGCACCCATCGC
515 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * * * * * *
21450403 ACATCATGAGCACACACTCCC-CCCTCCGATTGCCGGAACCCCATTACTGCCGGTCAGGCTT-TC
580 ACATCATGTGCGCACACCCCCGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG-TTCTC
* * * ** * * **
21450466 CGACGATGCTCTGGCGATGGTGCCTCGACGAAGAAAAATATGGCACTAGTACATGCTCGAGCCTG
644 CGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGC-CGAGCCCA
* * * **
21450531 GCATGTGCTGTCGCAAACCTCGGACCGGTCCGATCTTAGACTAGGAATGAACTCTATATGCTTAG
708 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTATGCTTAG
* *
21450596 ACTGGGAATGAACTCCGTACGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCC
772 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * * * * * *
21450661 AAAGGGGCGGGAAGTGTAACCCGAGGATCGGTCGGGTCCCCCTTTGTGTGCTAC
837 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
** * ** *
21450715 CGATCCTGCTGCCATAACCCTTGGTTTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* *
21450780 AGCCAACCGAAGAAACGAGCGGACGGGCGGGCACTATGCCGCCCAGAGAGACGGGATGCGCAAGC
66 AGCCAACCGAAGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
21450845 CGTGGATCGATATGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * *
21450910 TTTATGGCCTCTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
196 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * * *
21450975 CTCGTTTTTTATTTTTTATGATTTTTGAAACATTTTGTGGTTCAGGATTTTTTAAAATTTTTTGG
261 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
** *
21451040 GAAGGAGTTTTGGCCAAAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
326 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* **
21451105 ATTCAGCTAAAAACTCAAAGTGTACAAGA-TTTGTGACCATTTGAAAAAAGTGTCATCATATTTC
391 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC--CCCATTTC
* * ** * * *** * * * * * ***
21451169 -TAC-GTGCCAAT-GCCATTTTTATG---GCTTGTAAATTCAT-ACAATGGTCCCTTAA-GCCTT
454 AGACACT-TTAATGGCTACTGGCA-GCAAACCTGTAAAATC-TCA-AATGCT-CTTTAAGGGGGT
*** *** ***** * * ******
21451226 CACGTGAAGTT-TC-ATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTTT
514 ---GTG-AGTTCTCGA-GGTTTGATGA---G--GGATAGGGGGC-C-AATAT---AA--GGGCCA
* * * ** *** * * * * * * ***** * ** * *
21451289 GGTTCGAG-A-CTTTTTAAAAT-TTTTTCGGAAGGAGTTTTGGCCCCAAATTGGTAGACGTGATC
562 AGTACCAGCACCCATCGCACATCATGTGC-GCA-CACCCCCGCCCCCCGA-TCGT---CG-GAAC
** **** ** *** * * *
21451351 CTTGAATTTTTGTTGCCATGCACAAAAAAATTCAGCTAAAAACTAGAAGTG-TAC-AAGATTTTG
620 C-CCAA-------TGCC--GC-CGGTCAGGTT---CT-CCGAC--G-A-TGCTCCGACGA--TGG
* **** *** * ** * *
21451414 TGACCATTTGAA-AAAAATGTC--C-CCATTTCA-GAC-A-CTTTA--ATGGCTACTAGCAGCAA
664 TGCCCCGACGAAGAAAAATG-CGGCACCAGCACATGCCGAGC-CCAGCAT-G-TGCT-GCCGCAA
* * **** * ** ** ** * * * * * * *
21451470 -ACT-TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGA-GGTTTGA-TGAGGGATA
724 CCCTCGGTCCGGTC-C-GAT-CT-TAGACTGGAATG-AACTCCGT-ATGCTTAGACTG-GGAAT-
**** * * * * ** * **
21451531 GGGGGCCAATATAAGAGCC-AAGTACCAGCAACCATCGCACATC-A-TGTGCGCACAC-CCCCCG
781 GAACTCC-GTAT----GCCTAAGT--CA--ACCCA-CG-A-AACGAGCGTGCGGGCGCTCAGCCG
* **** * ** * * ** * * * *
21451592 GCCCCTCGATCTTC-GAAACCCCAATACC---G-TCGGTCAAGTTCTCCGTC-G-ATGCT-C
834 G--CC-AGAGGGGCGGGATGCGCAA-GCCGGGGATCGG-CCGGGTCCCCCTCTGCGTGCTAC
* * *** * * * *** * *
21451646 CGA-CGATGGTGCCCCGACCAAGAAAAAT-GTGACACCAG-CAT-ATGC-TCGAGCCCAGCATGT
1 CGATC-CTGCTG--CCG--C---AACCCTCG-G--TCCGGTC-TGAT-CTTAGA-CTGGGAATGA
* ** ** ** ** * * * * * *
21451706 GCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTAC-GCCTAAGTCAA
52 ACT-CCGTATGCCTAAG-CC-AACCGA----AGA-----AACG-A-GC-GGACGGGC--GGGC-A
* ** * * * ** *
21451770 CCGACGAAAGGAGCAGACG-GACGGG-CGACGGGAA-CTACGTCGGCCAGAGAGACGGGATGCGC
99 -CTACG-CCGG-CCAGA-GAGACGGGATG-C-GCAAGC--CGT-GG--ATCGATA-GGG-TG-G-
* *
21451832 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
149 TAG--GT--------------------GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
21451897 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
192 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
** * *
21451962 ATAACTCGTTTTCTATTTTTTATGATTTTTGAAACATTTT-CTGGTTCGGGATTTTTTAAAATTT
257 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGC-GGTTCGGGATTTTTTAAAATTT
* * *
21452026 TTTTGGAAGGAGTTTTGG-CCAAAACCTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCAC
321 TTTCGGAAGGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
*
21452090 AAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
385 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
21452155 TTTCAGACACTTTAGTGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
450 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
21452220 TGAGTTCTCGAGGTTTGATGAGGGTTAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
515 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
*
21452285 ACATCATGTGCGCACACCCCCCGACCCCCCGATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCT
580 ACATCATGTGCGCACA-CCCCCG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
* *
21452350 CC-AGTGATGCTTCGACGATGGTGCCCCGACGAAGAAAAATG-GGTCACCAGCACATGTCCGAGC
643 CCGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG-CACCAGCACATG-CCGAGC
* * * *
21452413 CTAGCATGTGCTGTCGCAACCCTCGGGCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
705 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTATGCT
* * *
21452478 TAGACTGGGAATGAACTTCATATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCG
769 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* * ** ** * *
21452543 GCTAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCAAGTCCCATTCTGCGTGTTGC
834 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
** ** ** * *
21452600 CGATCCTGCTGCCGCAACCCTCACTCCAATCCAATCTTATATTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
21452665 TGCCAACCGATGAAACAAGCGGGCGGGCGAGCGGGTGGGCACTACGCTGGCCAGAGAGACGGGAT
66 AGCCAACCGA--AGA-AA-CGAGC--G-GA-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * * * *
21452730 GCGCAAGCCGTGGATTGGTAGGGTGGTAGGTGGATTTAGGTACATCTTCATATTTCTACATGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
*
21452795 ATGCCATTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* *
21452860 CAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTTAAA
253 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * ***
21452925 TTTTTTCGGAAGGATTTTTGG-CCAAAAGCTACTTAGACGTGATCCTTGTATTTTT-TTGGCATG
318 TTTTTTCGGAAGGAGTTTTGGCCCCAAA-CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
** * * *
21452988 TGCAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGATCATTTGAAAAAAGTGTTC
382 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
21453053 CCATTTCAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTCAACTGCTCTTTAAGGGG
447 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
21453118 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCAT
512 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* *
21453183 CGTACATCATGTGCGCACACCCCTCGGCCCCCCTGATCGTCGGAACCCCAATGCCACCGGTCAGG
577 CGCACATCATGTGCGCACACCCC-C-GCCCCCC-GATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * *
21453248 TTCTCTGATGATGCTCCGACGATGGTGCCGCGACGAAGAAAAATGCGGCACCAGCACATGCCTGA
639 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-GA
21453313 GCCCAGCATGTGCTGCCGCAA-CC-C--T-C-G---G----T---CT-G---G---TCCG-AT-C
703 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGAATGAACTCCGTATGC
* *
21453353 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTTAGCC
768 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * * *** * * * * **
21453418 GACCAGAGGGGCGAGATGCGCAAGTCATAGACCGACCGAGTCCCCCTCTGTGTGCTGT
833 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
** * ** ** *
21453476 CGATCCTGCTATCGGAACCCTCCATCCGGTCCAATCTTAGACTGGGATTGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
21453541 AGCCAACCGACGAAACGAGCGGGAGGTCGGGCGGGCGGGCACTACGTCGACTAGAGAGACAGGAT
66 AGCCAACCGAAGAAACGAGC-GGA-------CGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
**
21453606 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGCCTTTAGGCACATCTTCATATTTCTGCATGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* *
21453671 ATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* ** * *** *
21453736 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCAAAATTTTTTTAAA
253 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* *
21453801 TTTTTTCGGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
318 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
21453866 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
383 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
21453931 CATTTTAGACACTTTAATGGCTACTAGCAGCAAACCTGAAAAATCTCAAATGCTCTTTAAGGGGG
448 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
21453996 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT-GAAGGGCCAAGTACTAGCACCCTTC
513 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * * * *
21454060 GCACATCATGTGTGCAGACCCCCCCGACCCCCTGATCAT-TGAATCCCCAATGCCGCCAGTCAAG
578 GCACATCATGTGCGC--ACACCCCCG-CCCCCCGATCGTCGGAA-CCCCAATGCCGCCGGTCAGG
* ** * * *
21454124 -T-T----C----C-CCGACGATGGTGCCCTGGTGAAGAAAAATGTGACACCAGCACATGACCAA
639 TTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCGA
* * * *
21454178 GCCCAGCATGTGCTGCCACAACCCTTGGTCCGG-CCTGATCTTATACTGGGAATGAACTCCATAT
703 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCC-GATCTTAGACT-GGAATGAACTCCGTAT
* * * *
21454242 GCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCACTCAG
766 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* * * * * **
21454307 CCGGCCAGAGGGGCGGGATGCACAAGCAGGGGATCGACCGGGTCCCCCTCTACGTACTGT
831 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
* * * ** *
21454367 CGATCCTACTACCGCAA-CCTCAGTCCGGTCCAATCTCAGACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
21454431 AGCCAACCGATGAAACGAGAGGGCGGGCGATCGGGCGGGCACTTCACCGACCAGAGAGACGGGAT
66 AGCCAACCGAAGAAAC--GA--GC--G-GA-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * * *
21454496 ACGCAAGCCATGGACCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCACGCCA
123 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* * * *
21454561 ATGCCATTTTTATGGCATGTAAATTCATACAGTGGTGCCTTAAGCCTTCACGTGAAGTTTCACGG
188 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * ** *
21454626 CAACACGACTTGTTTTCTCTTTTTCATGATTTTCAAAACTTTTTGGGGTTCGGGATTTTTTAAAA
253 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * * * * *
21454691 TTTTTTTGGAAGGATTTTTAGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTTTTGGCTTGC
318 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
21454756 ACAAAACAAA-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
383 ACAAAA-AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
21454820 CCATTTCAGACACTTAAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
447 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
21454885 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCAACCAT
512 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * * *
21454950 CGCACATCATGTGCGTACACCCCCTGGCCCCCCGATCGTCGGAACACCGATGCCGCTGGTCAGGT
577 CGCACATCATGTGCGCACACCCCC--GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* ** * * *
21455015 TCTCCGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGTGGCACTAGCACATGCCCGAC
640 TCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG-CCGAG
* * * * ** *
21455080 CCCAGCATGTGCTGCCGTAACCCTCAGTCTGATTTGATCTTAGATTGGGAATGAACTCCGTATGC
704 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACT-GGAATGAACTCCGTATGC
* *
21455145 TTCGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCC
768 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* ** * * * *
21455210 GGCCAGAGGGGTGGGATGCGCAAGCTAGGGATCGGCTGGG-CCCTTCTCTGCATGGTAC
833 GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCC-CCTCTGCGTGCTAC
* * * *
21455268 GGATCCTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTATACTGGGAATGAACTCCGTATGCCTA
1 CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
21455333 AGCCAACCGACGAAACGAGC--A--GGCAGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGC
66 AGCCAACCGAAGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
*
21455394 CGTGGATCGATAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
21455459 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGA
196 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* **
21455524 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTT
261 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT
21455560 ACGATTTGGG
Statistics
Matches: 9305, Mismatches: 1390, Indels: 852
0.81 0.12 0.07
Matches are distributed among these distances:
865 60 0.01
866 5 0.00
867 1 0.00
868 115 0.01
869 14 0.00
870 8 0.00
871 6 0.00
872 80 0.01
873 394 0.04
874 4 0.00
875 123 0.01
876 482 0.05
877 202 0.02
878 11 0.00
879 3 0.00
880 1 0.00
881 3 0.00
882 1 0.00
883 3 0.00
884 1 0.00
886 8 0.00
887 112 0.01
888 10 0.00
889 50 0.01
890 995 0.11
891 194 0.02
892 347 0.04
893 352 0.04
894 538 0.06
895 975 0.10
896 13 0.00
897 60 0.01
898 207 0.02
899 172 0.02
900 387 0.04
901 687 0.07
902 664 0.07
903 272 0.03
904 68 0.01
905 3 0.00
906 1 0.00
908 3 0.00
909 5 0.00
910 4 0.00
911 21 0.00
912 6 0.00
913 166 0.02
914 3 0.00
915 1 0.00
916 2 0.00
917 6 0.00
918 445 0.05
919 26 0.00
920 4 0.00
921 6 0.00
922 11 0.00
923 10 0.00
924 13 0.00
925 21 0.00
926 18 0.00
927 110 0.01
928 16 0.00
930 7 0.00
931 14 0.00
932 10 0.00
933 19 0.00
934 19 0.00
935 14 0.00
936 13 0.00
937 10 0.00
938 5 0.00
939 7 0.00
940 12 0.00
941 7 0.00
942 6 0.00
943 6 0.00
944 7 0.00
945 10 0.00
946 5 0.00
947 6 0.00
948 7 0.00
949 9 0.00
950 10 0.00
951 17 0.00
952 11 0.00
953 6 0.00
954 14 0.00
955 8 0.00
956 2 0.00
957 12 0.00
958 17 0.00
959 10 0.00
960 33 0.00
961 13 0.00
962 13 0.00
963 11 0.00
964 5 0.00
965 10 0.00
966 4 0.00
967 2 0.00
968 5 0.00
969 2 0.00
971 2 0.00
975 2 0.00
976 4 0.00
977 2 0.00
978 5 0.00
979 2 0.00
980 12 0.00
981 8 0.00
983 3 0.00
984 1 0.00
985 3 0.00
987 1 0.00
989 4 0.00
990 23 0.00
991 253 0.03
992 36 0.00
993 8 0.00
994 9 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
AGCCAACCGAAGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
GCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCGAGCCCAGCATGTGC
TGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTGGGAAT
GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
GGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTAC
Found at i:21452501 original size:26 final size:26
Alignment explanation
Indices: 21452450--21452502 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21452440 CTGGTCCGAT
*
21452450 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21452476 CTTAGACTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
21452502 C
1 C
21452503 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21454253 original size:26 final size:26
Alignment explanation
Indices: 21454217--21454269 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21454207 CCGGCCTGAT
* *
21454217 CTTATACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATAAACTCCATATG
*
21454243 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCATATG
21454269 C
1 C
21454270 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCATATG
Found at i:21455935 original size:428 final size:415
Alignment explanation
Indices: 21455151--21455988 Score: 1191
Period size: 428 Copynumber: 2.0 Consensus size: 415
21455141 ATGCTTCGAC
* * * *
21455151 TGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
1 TGGGAATGAACTCCGTATGCCTAAGTCAACCCAAGAAACGAGCATGCAGGCGCTCAGCCGACCAG
* * *** **
21455216 AGGGGTGGGATGCGCAAGCTAGGGATCGGCTGGGCCCTTCTCTGCATGGTACGGATCCTGCTGTC
66 AGGGGTGAGATGCGCAAGCTAGCGATCGGCTCCCCCCTTCTCTGCATGGTACGGATCCTGCTACC
** * * * *
21455281 GCAACCCTCGGTCTGGTCTGATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
131 GCAACCCTCCATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
21455346 AACGAGCAGGCAGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
196 AACGAGCAGGCAGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
**
21455411 GCAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
261 GCAGGTGCCTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
*
21455476 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTC
326 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
21455541 ACGATTTTCAAAACTTTTTACGATT
391 ACGATTTTCAAAACTTTTTACGATT
*
21455566 TGGGAATGAACTCCGTATGCCTAAGTCAACCCAAGAAATGAGCATGCAGGCGCTCAGCCGACCAG
1 TGGGAATGAACTCCGTATGCCTAAGTCAACCCAAGAAACGAGCATGCAGGCGCTCAGCCGACCAG
* * * *
21455631 AGGGGTGAGATGCGTAAGTCATAGACCGATCGGGTCCCCCCTCTGTGTGC-T-GT-C-GATCCTG
66 AGGGGTGAGATGCGCAAG-C-TAG--CGATCGGCTCCCCCCT-TCTCTGCATGGTACGGATCCTG
* *
21455692 CTACCGGAACCCTCCATCCGATCCGATCTTAGACTGGGATTGAACTCCGTATGCCTAAGCCAACC
126 CTACCGCAACCCTCCATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
*
21455757 GACGAAACGAGCGGGAGGCCGGGTGGGCAGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGC
191 GACGAAACGAGC---A---------GGCAGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGC
*
21455822 CGTGGATCGATAGGGTGGTAGGTGCCTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
244 CGTGGATCGATAGGGTGGCAGGTGCCTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
21455887 TTTAAT-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCGCGTGAAGTTTCATGGCAAGACG
309 TTT-ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
21455951 ACTTGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
373 ACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTA
21455989 AGTTTCAAGA
Statistics
Matches: 373, Mismatches: 32, Indels: 23
0.87 0.07 0.05
Matches are distributed among these distances:
415 76 0.20
416 75 0.20
417 4 0.01
418 2 0.01
419 13 0.03
420 5 0.01
428 196 0.53
429 2 0.01
ACGTcount: A:0.24, C:0.25, G:0.26, T:0.25
Consensus pattern (415 bp):
TGGGAATGAACTCCGTATGCCTAAGTCAACCCAAGAAACGAGCATGCAGGCGCTCAGCCGACCAG
AGGGGTGAGATGCGCAAGCTAGCGATCGGCTCCCCCCTTCTCTGCATGGTACGGATCCTGCTACC
GCAACCCTCCATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
AACGAGCAGGCAGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
GCAGGTGCCTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
ACGATTTTCAAAACTTTTTACGATT
Found at i:21456472 original size:26 final size:26
Alignment explanation
Indices: 21456436--21456507 Score: 117
Period size: 26 Copynumber: 2.8 Consensus size: 26
21456426 TTGGTCTGAT
21456436 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21456462 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
21456488 CCTACACTGGGAATGAACTC
1 CTTAGACTGGGAATGAACTC
21456508 TGTATGCCTA
Statistics
Matches: 42, Mismatches: 4, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 42 1.00
ACGTcount: A:0.31, C:0.21, G:0.22, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21456513 original size:26 final size:26
Alignment explanation
Indices: 21456441--21456517 Score: 109
Period size: 26 Copynumber: 3.0 Consensus size: 26
21456431 CTGATCTTAG
* *
21456441 ACTGGGAATGAACTCCATATGCTTAG
1 ACTGGGAATGAACTCCATATGCCTAC
*
21456467 ATTGGGAATGAACTCCATATGCCTAC
1 ACTGGGAATGAACTCCATATGCCTAC
**
21456493 ACTGGGAATGAACTCTGTATGCCTA
1 ACTGGGAATGAACTCCATATGCCTA
21456518 AGTCAACCCA
Statistics
Matches: 45, Mismatches: 6, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.30, C:0.21, G:0.22, T:0.27
Consensus pattern (26 bp):
ACTGGGAATGAACTCCATATGCCTAC
Found at i:21458031 original size:894 final size:875
Alignment explanation
Indices: 21456904--21459179 Score: 2862
Period size: 901 Copynumber: 2.5 Consensus size: 875
21456894 TCACGATTTG
* * * *
21456904 TAAAA-TTTTTTGAAAGAAGTTTTAGCCCCAAACTTGAAGGACGTTATCCTTGTATTTTTGTTGG
1 TAAAATTTTTTTGGAAGAAGTTTTGGCCCCAAACTTGTA-GACGTGATCCTTGTATTTTTGTTGG
*
21456968 CATGGAT-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
65 CATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
21457032 TGTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
130 TGTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
21457097 AGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCT
195 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCA
* *
21457162 CCCATCCCACATCATGTGCGCACACCCCCACGACCCCTCGATCACCGGAACCCCAATGCCGCCGG
260 CCCATCACACATCATGTGCGCACACCCCC-CGACCCCCCGATCACCGGAACCCCAATGCCGCCGG
* * * * *
21457227 TTAGGTTCTCCGGTGATGCTCCGACGATGGTGTCCCGAGGAAGAAAAATACGGCACCAACACATG
324 TCAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT-CGGCACCAGCACATG
* *
21457292 CTGGAGCCCAGCATGTGCTGCT-GCGACCCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACTT
388 CTCGAGCCCAGCATGTGCTGCTCGCGACCCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACTC
*
21457356 CGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGAGGGGCGGGATGC
453 CGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * *
21457421 GCAAGCCGGGGATTAGTCAG-GTCCCCTTCTGCGTGCTGCCGATCCTGCTG-TCACAACCCTCGG
518 GCAAGCCGGGGA-TAGACAGAGTCCCCCTCTACGTGCTGCCGATCCTGCTGCT-ACAACCCTCGA
* * * * *
21457484 TCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAGCAAACGGGA
581 TCCGATCTAATCTTAGACTAGAAATGAACTCCGTATGCCTAAGCCAACC---GAAG-AAAC----
* * * *
21457549 GGGTGAGCGGGCGGGTGGGCTGGCGGGCGAGCACTGCGCAAGCCAGAGAGACGGGATACGCAAGC
638 ----GAGCGGGCGAGCGGGCGGGCAGGCGA-CAC-GC-C-AGCCAGAGAGACGGGATACGCAAGC
* *
21457614 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
695 CATGGAT-GATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * * *
21457679 TTTATGGCTTGTAAACT-CATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAGG
759 TTTATGGCTTGGAAA-TGCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACG
*
21457743 ACTCCTTTTCTATTTTTTACGATTTTCAAAACTTTTT-TCGGTTCGAGATTGTT
823 ACTCCTTTTCTATTTTTCACGATTTTCAAAACTTTTTAT-GGTTCGAGATTGTT
* * * *
21457796 TAAAATTTTTTTGGAAGGATTTTTGGCACCAAACTTGGTAGACGTGATCCTTGTATTTTGGTTGG
1 TAAAATTTTTTTGGAAGAAGTTTTGGCCCCAAACTT-GTAGACGTGATCCTTGTATTTTTGTTGG
21457861 CATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
65 CATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * *
21457926 TGTCCCTATTTCAGACTCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCCCTTTA
130 TGTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
*
21457991 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
195 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCA
* * * ** * * *
21458056 CCCATCACACATCATGTGCGCACACCCTCCGGCCCCCCGATCGCTAGAACCCTAATGCCACTGGT
260 CCCATCACACATCATGTGCGCACACCCCCCGACCCCCCGATCACCGGAACCCCAATGCCGCCGGT
*
21458121 CAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT-GTGAACCAGCACATGC
325 CAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATCG-GCACCAGCACATGC
* ** *
21458185 TCGATCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTAGAAATGAACTCCA
389 TCGAGCCCAGCATGTGCTG--------CTC-G--CGA-CC---CTT-G----G---TCCAGTCC-
* * * *
21458250 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATAAAATGAGCGTGCGGGGGCT
430 GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCT
* * * **
21458315 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGAGTCCCCCTCTACGTGGTGTTG
494 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATAGACAGAGTCCCCCTCTACGTGCTGCCG
* *
21458380 ATCCTTCTGCTACAACCCTCGATCCGATCTAATCTTAGACTAGAAATGAACTTCGTATGCCTAAG
559 ATCCTGCTGCTACAACCCTCGATCCGATCTAATCTTAGACTAGAAATGAACTCCGTATGCCTAAG
* * * * **
21458445 CCAACCGACGAAACGAGCGGGCGAGCGGGCGGGCAGGCTATACGCCGGCCAGAGAGACGGGATGT
624 CCAACCGAAGAAACGAGCGGGCGAGCGGGCGGGCAGGCGACACGCCAGCCAGAGAGACGGGATAC
**
21458510 GCAAGCCATGGATGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATG
689 GCAAGCCATGGATGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
*
21458575 CCATTTTTATGGCTTGGAAATGCATACAATGGTCCTTTAAGCCTTCACATGAAGTTTCATGGCAA
754 CCATTTTTATGGCTTGGAAATGCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAA
* ** * * *
21458640 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTTGGGATTTTT
819 GACGACTCCTTTTCTATTTTTCACGATTTTCAAAACTTTTTATGGTTCGAGATTGTT
** * * *
21458697 TAAAATTTTTTTGGAACTAGTTTTGGCCCCAAACTTCTTAGATGTGATCCTTGTATTTTTTTTGG
1 TAAAATTTTTTTGGAAGAAGTTTTGGCCCCAAACTT-GTAGACGTGATCCTTGTATTTTTGTTGG
* * * * * * *
21458762 CATGCA-AAAAAAAGTTCAGCTAAAAAGTTGAACTGTATAAGATTTTGAGACCATTCGAAAAAAG
65 CATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * *
21458826 TGTCCCCATTTCATACACTTTAATGGCTACTGGTAGCAAACCTGCAAAATCTCAAAAGCTCTTTA
130 TGTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
21458891 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATACAAGGGCCAAGGACCAGCA
195 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCA
* * * *
21458956 CCCATCGCACATCATGTGTGCACATCCCCCCGGCCCCCCCGATCATCGGAACCCCAATGCCGCCG
260 CCCATCACACATCATGTGCGCACA-CCCCCC-GACCCCCCGATCACCGGAACCCCAATGCCGCCG
* * ** *
21459021 ATCAAGTTCTCTGGTGATGCTCCGATAATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACAT
323 GTCAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT-CGGCACCAGCACAT
* * * * * * **
21459086 GCCCGAGCCAAGCATGTGCTG-TCACAACCCTCGGTCCTGTTTGATCTTAGACTGGGAATGAACT
387 GCTCGAGCCCAGCATGTGCTGCTCGCGACCCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACT
* * * *
21459150 CCGTATGTCTAAGCCAACCGACGAAACGAG
452 CCGTATGCCTAAGTCAACCCATGAAACGAG
21459180 AGGGAGGGCG
Statistics
Matches: 1198, Mismatches: 148, Indels: 91
0.83 0.10 0.06
Matches are distributed among these distances:
877 43 0.04
878 2 0.00
879 2 0.00
882 1 0.00
886 1 0.00
887 2 0.00
890 2 0.00
891 3 0.00
892 34 0.03
893 126 0.11
894 210 0.18
900 196 0.16
901 222 0.19
902 101 0.08
903 30 0.03
904 5 0.00
905 4 0.00
906 21 0.02
908 3 0.00
909 1 0.00
913 1 0.00
914 4 0.00
915 3 0.00
916 5 0.00
917 6 0.01
918 169 0.14
919 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (875 bp):
TAAAATTTTTTTGGAAGAAGTTTTGGCCCCAAACTTGTAGACGTGATCCTTGTATTTTTGTTGGC
ATGCATAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
GTCCCCATTTCACACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCAC
CCATCACACATCATGTGCGCACACCCCCCGACCCCCCGATCACCGGAACCCCAATGCCGCCGGTC
AAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATCGGCACCAGCACATGCTC
GAGCCCAGCATGTGCTGCTCGCGACCCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGT
ATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
AGCCGGGGATAGACAGAGTCCCCCTCTACGTGCTGCCGATCCTGCTGCTACAACCCTCGATCCGA
TCTAATCTTAGACTAGAAATGAACTCCGTATGCCTAAGCCAACCGAAGAAACGAGCGGGCGAGCG
GGCGGGCAGGCGACACGCCAGCCAGAGAGACGGGATACGCAAGCCATGGATGATAGGGTCGTAGG
TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGGAAATGCATAC
AATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCCTTTTCTATTTTTCACGAT
TTTCAAAACTTTTTATGGTTCGAGATTGTT
Found at i:21458268 original size:26 final size:26
Alignment explanation
Indices: 21458228--21458280 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21458218 CCGATCCGAT
21458228 CTTAGACTAGAAATGAACTCCATATG
1 CTTAGACTAGAAATGAACTCCATATG
* * *
21458254 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGAAATGAACTCCATATG
21458280 C
1 C
21458281 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.21, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGAAATGAACTCCATATG
Found at i:21461610 original size:26 final size:26
Alignment explanation
Indices: 21461581--21461633 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21461571 CCGATCTGAT
21461581 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
* *
21461607 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
21461633 C
1 C
21461634 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:21462518 original size:26 final size:26
Alignment explanation
Indices: 21462469--21462521 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21462459 CTGGTCCAAT
**
21462469 CTTAGACTGGGAATAAACTTCGTATG
1 CTTAGACTGGGAATAAACCCCGTATG
*
21462495 CTTAGACTGGGAATGAACCCCGTATG
1 CTTAGACTGGGAATAAACCCCGTATG
21462521 C
1 C
21462522 CTAAATCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACCCCGTATG
Found at i:21463054 original size:903 final size:898
Alignment explanation
Indices: 21460705--21468935 Score: 10253
Period size: 888 Copynumber: 9.3 Consensus size: 898
21460695 CCGATCTGAT
* * *
21460705 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAA-GTAGCGTGTGGACGC-CAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG-AGCGTGCGGGCGCTCAG
** * ** * * * *
21460768 TTGGCCAGAGGGACGGGATTTGCAAGCCGGTGATCAGTTGGGTCCCCCT-TTACGTGCTGCCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGA-GTGCTGCCGAT
* * *** *
21460832 CCTGCTACCGCAACCCTTGGTCCAATCCGA-CTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
129 CCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * **
21460896 AACTGACGAAACAAGCG-GATGGACGGGCGGACGGGAACTACGTTGGCCAGAGAGACGGGATGCG
194 AACCGACGAAACGAGCGCGA--G-CGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATGCG
* * **
21460960 CAAGCTGTGGATCGATAGTGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATG
255 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
* *
21461025 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTACACTTGAAGTTTCATGGCAA
320 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * *
21461090 GACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAGGTT
385 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA-ATT
** ** *
21461155 TTTCAGAAGGAGTTTTGGCCCCAAACTTTTTAGACGTGATCCTTGTATTTTTATTGGCATGCACA
449 TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
21461220 AAAAAATTCAGGTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
21461285 TTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
21461350 GAGTTCTCGAGGTTCGATGAGGGATAAGGGGCTAATATAAGGGTCAAGTACCAGCACCCATCGCA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * *
21461415 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATC-ACTGGAACCTCGATGCCGCCGATCAAGTT
709 CATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTT
* * ** **
21461479 CTCC-AGTGATGCTTCGACGATGGTGCCCCGGTGAAGAAAAATGTAGCACCAGCACATGCCCGAG
772 CTCCGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * *
21461543 CCCAGCATGTGCTGTTGCAACCCTCGATCCGATCTGATCTTAGACTGGCAATGAACTCCGTATG
836 CCCAGCATGTGCTGTCGCAACCCTCG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
21461607 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCCGGCGTTCCA-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT-CAG
* * * ***
21461671 CCGGCAAGAGGTGCGGGATGCGCAAGCCAGGGATCGGCCATGTCCCCCTCTGCA-TGCT---G--
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTG-AGTGCTGCCGAT
* * * *
21461730 CC-G-T-----AACCCTCGATCGGGT-TCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGC
129 CCTGCTACCACAACCCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* *
21461787 CAACCGAGGAAACTAGCG-G-GCGGGCGGGCGGGCACTACAG-CGGCCAGAGAGACGGGATGCGC
193 CAACCGACGAAACGAGCGCGAGCGGGCGGGC-GGCACTAC-GCCGGCCAGAGAGACGGGATGCGC
* * ** * ** *
21461849 AAGCTGTGAATCGATAGGGTGGTAGGTGATTTTAGGCACATCCTCATATTTCTATGTGCCAATAC
256 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGC
* *
21461914 CAATTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAG
321 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * *
21461979 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTTGGGATTTTTTAAAATTTT
386 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTT
* * *
21462044 TTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTCTACTTTTATTGGCATGCACAA
450 TTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
21462109 AAAACTTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCTCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
21462174 TAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGCGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
21462239 AGTTCTTGAGGTTTGATGAGGGACAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
*
21462304 ATCATGTGCGCACACCTCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTGT
710 ATCATGTGCGCACACC-CCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * * *
21462369 CCGACGATGCTCCGGCCATGGTGCCTCGACGAAGAAAATTGCGGCACCAGCACATACCCAAACCC
774 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * *
21462434 AGTATGTGCTGTCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATAAACTTCGTATG
839 AGCATGTGCTGTCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
21462495 CTTAGACTGGGAATGAACCCCGTATGCCTAAATCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * *
21462560 CGTCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAACTGGGTCCCCCTCTGATTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGAGTGCTGCCGATCC
* * * *
21462625 TGCTGCCACAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACT-CGTATGCCTAATCCAA
131 TGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
21462689 CCGACGAAACGAGCGGGCGAGCGGGCGGGCAGGCACTACGTCGGCCAGAGAAACGGGATGTGCAA
196 CCGACGAAACGAGC--GCGAGCGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
21462754 GCCGTTGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
258 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * *
21462819 TTTCTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTAATGGCAAGAC
323 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
21462884 GACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAGTTTTT
388 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTT
* * * *
21462949 TGAAAGGAGTTTTGGTCCCAAACTTGGTAGAAGTGATCCATT-TATTTTTGTTGGCACGCACAAA
452 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCACAAA
21463013 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
21463078 GAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
21463143 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA-CAGCACCCATCGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
21463207 TCATGTGCGCACACCCCCCTCGGCCCCCCCGATTGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
711 TCATGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * ** * * * *
21463272 CCGGCGATGCTCCGACGTTTTTGCCCTGACAAAGAAAAATGCGGCACCAGCATATGCTCGAGCCC
774 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * *
21463337 AGTATGTGCTGTGGGAACCCTTAGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
839 AGCATGTGCTGTCGCAACCC-TCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** *
21463398 CTTAGACTGGGGATGAAATCTATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
21463463 CGGCCAGAGGGGCAGGATGCGCAAGCGGGGGATCGGCCGGGTCCCCCTCT-ACGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGA-GTGCTGCCGATC
* * * ** *
21463527 CTGCTGCCACAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
130 CTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
21463592 ACCGATGAAACGAGCGGGCGGGCGAGCGGGCGAACACTTCGTCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGC--GCGAGCGGGCGGGCG-GCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * * * *
21463657 CGCCGTGGATAGATAGGGTTGTTGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCC
257 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
* * * *
21463722 ATTTTTATGGCTTGTAAATTCAAACCATGGTCCCTTAAGCCTTCACGTTAAGTTTCAAGGCAAGA
322 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * **
21463787 CGACTCATTTTCTATTTTTCAGGATTTTCGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTATT
387 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT-TT
** * * *
21463852 TTGGAAGGAGTTTTGAACCCAAACTTGGTATACGTGATCCTTGTATTTTT-TTTGCTATGCATAA
451 TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC-ATGCACAA
21463916 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
21463981 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTATTTAAGGGGGTGTG
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
21464046 AGTTCTCGAGGTTTGATTAGGGATA-AGGGCCAATATAAGGGCCAAGTACCAACACCCATCACAC
645 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
21464110 ATCATGTGCGCACACCCCCCGGCTCCCCCGATCGTCGGACCCCCAATGCCGTCGGTCAGGTTCT-
710 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* ** * *
21464174 CTAGCGATGCTCCGGTGATGGCGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
775 CGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* ** *
21464239 AGCATGTGCTGTCGTAACCCTCGGTCCATTCCGATCTTAGACTGGGAACGAACTCCGTATG
839 AGCATGTGCTGTCGCAACCCTC-GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
21464300 CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCAATGAAACGAGCATGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
21464365 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCCT-GGTCCCCCTCTGCGTGCTGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GGCTGGGTCCCCCTCTGAGTGCTGCCGATC
* * ** * * * *
21464429 CTGCTACTACAACCCTCAGT-TCGGTCCAATCTTATACT-GGAATTAACTCCGTATACCTAAGCT
130 CTGCTACCACAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
21464492 AACTGATG-AA--A---CGAGCGGGC--G-GGCATTACGCCGGCCAGAGAGACGGGATGCGCAAG
194 AACCGACGAAACGAGCGCGAGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * *
21464548 CCTTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGCCAT
259 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* * * *
21464613 TTTTATGGCTTGTAAATTCATACAGTGGCCCCATAAGCCTTCACGTGAAGTTTCATGGCAAGATG
324 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* ** * * *
21464678 ACTCATTTTCTATTTTTCATAATTTTTTAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTCG
389 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTG
* * *
21464743 GAAGTAGTTTTGGCCCCGAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
21464808 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
21464873 ACACTTTAATGGCTACT-GCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
21464937 CTCGAGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
21465002 TGTGCGCACACCCCCCGACCCCCCTGATCG-CTGGAACCTCAATGCGGTCGGTCAAGTTCTCCGA
714 TGTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * *
21465066 CGA---T--G--GA----GCCTC-AGCGAAGAAAAATACGGCACCAGCACCTGCCCGAGCCCAGC
778 CGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
*
21465119 ATGTG-TGGCTGCAA----C--CC--T-CGATC-----C--GG--T----T-CG-AT-
842 ATGTGCTGTC-GCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
21465151 CTTAGACTGGGAATGAACTCCGTATGCCTTAGTCAACCCAAAAAATGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
21465216 CGACCAAAGTGGTGGGATGCGTAA-CTCGGGGATC-GATCGGTCCCCCTCTGCGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGC-CGGGGATCGGCTGGGTCCCCCTCTGAGTGCTGCCGATC
* * * * * *
21465279 CTACTATCGCAACCCTCGGTCTGGTCTGATATTAGATTGGGAATGAACTCCGTATACCTAAGCCA
130 CTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
21465344 ACCGAAGAAACGAGCG-G-GCGGGC---AGGCACTACGCCTGCCAGAGAGACGTGATGCGCAAGT
195 ACCGACGAAACGAGCGCGAGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * * *
21465404 CGTGGATCGATAGGGTGGTAGGTGGCTTTAGGCTCGTCTTCATATTTCTACGTGCCAATGCCATT
260 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
21465469 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
325 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
21465534 CTCGTTTTCTATTTTTCATG-CTTTTAAAACTTTTTACGGCTCGGGATTTTTTAAAATTTTTTCG
390 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT-G
* * * *
21465598 AAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATTCAAAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * * **
21465663 ATTCAGCTAAAACCTCAAAGTATACAATATTTTGTGACCATTTGAAAAAAGTGTTTCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
21465728 ACACTTTAATGGCAACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
** **
21465793 CTCGAGGTTTGACAAATGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
21465858 AGTGCACACACCCCCCCGGCCCCCTCGATCGTCGAAACCCCAACGCCGTCGGTCAGGTTCT-C--
714 TGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * *
21465920 CG--G-T-----GATGGTGCCCCGATGAAGAAAACTGCGGCACCAGCACATGCTCGAGCCCAGCA
778 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
21465977 TGTGCTGCCACAACCCTCGGTCCGAT-CGAATCTTTGACTGGGAATGAACTCCGTATG
843 TGTGCTGTCGCAACCCTC-GTCCGGTCCG-ATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
21466034 CTTAGACTAGGAATGAACTCCATATGCCTATGTCAACCCACGAAATGAGCG-GCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** *
21466098 CGGCCAGAGGGGCGAGATGCGCAAGTAGGGGATCGG-TCGGGTCCCCCTCT-ACGTGCTGTCGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGA-GTGCTGCCGAT
* * * * * *
21466161 CCT-CTTGCCACAACCCTCAGTCTGATCTGATCTAAGACTGGGAATAAACTCCATATGCCTAAGC
129 CCTGC-TACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
21466225 CCACCGACGAAACGAGC-AG-GCGGGCGGGCGGGCACTATGTCGGCCAAAGAGACGGGATGCGCA
193 CAACCGACGAAACGAGCGCGAGCGGGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
21466288 AGCCGTGGATCGATAGGTTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGTGTGCCAATGCC
257 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
21466353 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGAAAGA
322 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
21466418 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTATGCGGTTTGAGATTTTTTAAAATTTTT
387 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
21466483 TGGAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTAGTTGTCATGCACAAAA
452 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
21466548 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTC
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
21466613 AGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
21466678 TTCTCGAGGTTTGGTGAGGGATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
21466743 CATGTGTGCACACCCCCATCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGATCAGGTTCTC
712 CATGTGCGCACACCCCC--CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
*
21466808 CAGA-GATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
775 C-GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * *
21466872 AGCATGTACTG-CTGAAACCCTCGATCCGGTCTGATCTTAGAGTGGGAATGAACTCCGTATG
839 AGCATGTGCTGTC-GCAACCCTCG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
21466933 CTTAGAGTGGGAATGAACTCTGTATGCCTAGGTCAACCCACGAAACGAGCGTGCGGGCGTTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * *
21466998 CGGCCAGAGGGGCAGGATGCGCAAGCTTGGGATCGGCCGAGT-CCCCTCTGTGTGCTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGAGTGCTGCCGATCC
* * *
21467062 TGCTACCCCAACCCTCGATCTGGTCTGATCTTAGACT-GGAATGAGCTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
21467126 CCAACGAAACGAGC-AG-GC-GG-GAG-GGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCC
196 CCGACGAAACGAGCGCGAGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
21467186 GTGGATCGATAGGTTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATTCCATTT
261 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* *
21467251 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACGTGAAGTTTCATGGCAAGATGAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * * * *
21467316 TCGTTGTCTATTTTTCACGATTTTCAAAACTTTTTTGCAGTTTGGGATTTTTAAAAATTTTTTCA
391 TCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTTACGGTTCGGGATTTTTTAAAATTTTTT-G
* * *
21467381 GAAGGAGTTTTAGCCCCAAACTT-GTAGATGTGATCCTTGTATTTTTGTTGACATGCACAAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
21467445 ATTCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAG
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
21467510 ACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
584 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
21467575 CTCGAGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAGGTACCAGCACCCATCGCACATCA
649 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * **
21467640 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCATTGCCGTTGGTCAGGTTCTCCGGG
714 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* * *
21467705 GATGCTCCGACGATGGTGCCACAATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
779 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * *
21467770 GTGCTGCCGCAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
844 GTGCTGTCGCAACCCTCG-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
21467826 CTTAGACTGGGAATGAACTCCATATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGCTCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
21467891 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGG-TCGGGTCCCCCTCTGCGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCT-GGGTCCCCCTCTGAGTGCTGCCGATC
** * * * * *
21467955 CTGCTGGCATAACCCTTGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAACCCA
130 CTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
21468020 ACCGACGAAACGAGTG-G-GCGGGCGGGC-G--CTACGCCAGCCAAAGAGACGGGATGCGCAAGC
195 ACCGACGAAACGAGCGCGAGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
21468080 CGTGGATCTATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
260 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
* *
21468145 TTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGG
325 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
21468210 C-CTGTTTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTG
390 CTC-GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTG
* * *
21468274 GAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGGTCCTTGTATTTTTGTTGGCATGCACAAAACA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
21468339 ATTCAGCTAAAAACTC-AATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
519 ATTCAGCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
21468403 GACACTTTAATGGCTACTGGCAACAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
21468468 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTATCAGCACCCATCGCATATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * * * *
21468533 ATGTGCACACACTCCCCGACCCCCCCGATCGCCGGAACCCCAATACCGGCAGTCAGGTTGT-C--
713 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* *
21468595 CG--G-T-----GATGGTGCCCCGACGAAG-AAAATGTGGCACCAGCACATGCTCGAGCCCAGCA
778 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
*
21468651 TGTGCTGCCGCAA--------C---CC--TC---GA-T----ATG-A-TCC-TAT-
843 TGTGCTGTCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
21468682 CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGGAACGAGCGTGCGGGTGCCCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
21468747 CGGCTAGAGGGACGGGATGCGTAAG-TGAGGGATCGG-TCGGGTCCCCCTCTGCGTGCTGCCGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCG-GGGATCGGCT-GGGTCCCCCTCTGAGTGCTGCCGAT
* * * * * * *
21468810 CCTACTACCACAACCCTTGGTCCGATCCGATCTTAGACTGGGAATAAACCCCGTATGCCTAAGCC
129 CCTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
21468875 AACCGATGAAACGA--GC-A----G-GTG-GGCACTACGCTGGCCAGAGAGACAGGATGCGCAAG
194 AACCGACGAAACGAGCGCGAGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
21468931 CCGTG
259 CCGTG
21468936 TGTCATGAGC
Statistics
Matches: 6435, Mismatches: 739, Indels: 360
0.85 0.10 0.05
Matches are distributed among these distances:
849 1 0.00
850 54 0.01
851 114 0.02
852 36 0.01
853 4 0.00
854 43 0.01
855 311 0.05
856 296 0.05
857 89 0.01
858 8 0.00
859 1 0.00
860 5 0.00
861 1 0.00
862 1 0.00
864 3 0.00
865 2 0.00
866 3 0.00
867 8 0.00
868 3 0.00
870 3 0.00
872 1 0.00
873 2 0.00
874 2 0.00
876 5 0.00
877 48 0.01
880 1 0.00
881 4 0.00
882 85 0.01
883 156 0.02
885 1 0.00
886 5 0.00
887 483 0.08
888 1015 0.16
889 207 0.03
890 1 0.00
891 15 0.00
892 49 0.01
893 283 0.04
894 535 0.08
895 479 0.07
896 26 0.00
897 6 0.00
898 45 0.01
899 213 0.03
900 83 0.01
901 32 0.00
902 373 0.06
903 820 0.13
904 473 0.07
905 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCTGGGTCCCCCTCTGAGTGCTGCCGATCC
TGCTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGCGAGCGGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTGTCGCAACCCTCGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:21463423 original size:26 final size:26
Alignment explanation
Indices: 21463372--21463424 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
21463362 CCAGTCCGAT
* *
21463372 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCATATG
* *
21463398 CTTAGACTGGGGATGAAATCTATATG
1 CTTAGACTGGGAATGAAATCCATATG
21463424 C
1 C
21463425 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCATATG
Found at i:21464303 original size:26 final size:26
Alignment explanation
Indices: 21464274--21464326 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21464264 CCATTCCGAT
21464274 CTTAGACTGGGAACGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
*
21464300 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
21464326 C
1 C
21464327 CTAACTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:21466936 original size:26 final size:26
Alignment explanation
Indices: 21466907--21466959 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21466897 CCGGTCTGAT
21466907 CTTAGAGTGGGAATGAACTCCGTATG
1 CTTAGAGTGGGAATGAACTCCGTATG
*
21466933 CTTAGAGTGGGAATGAACTCTGTATG
1 CTTAGAGTGGGAATGAACTCCGTATG
21466959 C
1 C
21466960 CTAGGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.30, T:0.28
Consensus pattern (26 bp):
CTTAGAGTGGGAATGAACTCCGTATG
Found at i:21467829 original size:26 final size:26
Alignment explanation
Indices: 21467800--21467852 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21467790 CCGGTCTGAT
*
21467800 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
21467826 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
21467852 C
1 C
21467853 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21468503 original size:894 final size:892
Alignment explanation
Indices: 21465151--21468935 Score: 5090
Period size: 894 Copynumber: 4.3 Consensus size: 892
21465141 CCGGTTCGAT
* ** * *
21465151 CTTAGACTGGGAATGAACTCCGTATGCCTTAGTCAACCCAAAAAATGAGCGTGCGGG-TGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCT-CTCAA
* * * * * *
21465215 CCGACCAAAGTGGTGGGATGCGTAA-CTCGGGGATCGATC-GGTCCCCCTCTGCGTGCTGCCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * *
21465278 CCTACTATCGCAACCCTCGGTCTGGTCTGATATTAGATTGGGAATGAACTCCGTATACCTAAGCC
129 CCTACTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
21465343 AACCGAAGAAACGAGCGGGCGGGCAGGCACTACGCCTGCCAGAGAGACGTGATGCGCAAGTCGTG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * *
21465408 GATCGATAGGGTGGTAGGTGGCTTTAGGCTCGTCTTCATATTTCTACGTGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
21465473 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * * *
21465538 TTTTCTATTTTTCATG-CTTTTAAAACTTTTTACGGCTCGGGATTTTTTAAAATTTTTTCGAAAG
389 TTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAG
** * *
21465602 GAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATTCAAAAAAAAATTC
454 GAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * * * **
21465667 AGCTAAAACCTCAAAGTATACAATATTTTGTGACCATTTGAAAAAAGTGTTTCCATTTCAGACAC
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
21465732 TTTAATGGCAACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
** ** *
21465797 AGGTTTGACAAATGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAAGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * *
21465862 CACACACCCCCCCGGCCCCCTCGATCGTCGAAACCCCAACGCCGTCGGTCAGGTTCTCC--G--G
714 CACACA-CCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGGATG
* *
21465923 T-----GATGGTGCCCCGATGAAGAAAACTGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCT
778 TCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * *
21465983 GCCACAACCCTCGGTCCGATCGAATCTTTGACTGGGAATGAACTCCGTATG
843 GCCGCAACCCTCGATCCGGTCG-ATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
21466034 CTTAGACTAGGAATGAACTCCATATGCCTATGTCAACCCACGAAATGAGCG-GCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCTCTCAAC
* * *
21466098 CGGCCAGAGGGGCGAGATGCGCAAG-TAGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
21466162 CT-CTTGCCACAACCCTCAGTCTGATCTGATCTAAGACTGGGAATAAACTCCATATGCCTAAGCC
130 CTAC-TACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
21466226 CACCGACGAAACGAGCAGGCGGGCGGGCGGGCACTATGTCGGCCAAAGAGACGGGATGCGCAAGC
194 AACCGACGAAAC--G-A-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
21466291 CGTGGATCGATAGGTTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGTGTGCCAATGCCATT
255 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
*
21466356 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGAAAGACGA
320 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
21466421 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTATGCGGTTTGAGATTTTTTAAAATTTTTT-G
385 CTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCG
* * *
21466485 GAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTAGTTGTCATGCACAAAAAA
450 GAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
21466550 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAG
515 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
21466615 ACAATTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTT
580 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
21466680 CTCGAGGTTTGGTGAGGGATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCA
645 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
** * *
21466745 TGTGTGCACACCCCCATCGGCCCCCCCGATCGCCGAAACCCCAATGCCGCCGATCAGGTTCTCCA
710 TGTGCACACACCCCC--CGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCC-
*
21466810 GAGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
772 GGGATG-TCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
21466875 ATGTACTGCTGAAACCCTCGATCCGGTCTGATCTTAGAGTGGGAATGAACTCCGTATG
836 ATGTGCTGCCGCAACCCTCGATCCGGTC-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
21466933 CTTAGAGTGGGAATGAACTCTGTATGCCTAGGTCAACCCACGAAACGAGCGTGCGGGCGT-TCAA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-TCTCAA
* * * * *
21466997 CCGGCCAGAGGGGCAGGATGCGCAAGCTTGGGATCGGCCGAGT-CCCCTCTGTGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * *
21467061 TTGCTACCCCAACCCTCGATCTGGTCTGATCTTAGACT-GGAATGAGCTCCGTATGCCTAAGCCA
130 CTACTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
21467125 ACCAACGAAACGAGCAGGCGGGAGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * *
21467190 ATCGATAGGTTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATTCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
* *
21467255 GGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACGTGAAGTTTCATGGCAAGATGACTCGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * * * * *
21467320 TGTCTATTTTTCACGATTTTCAAAACTTTTTTGCAGTTTGGGATTTTTAAAAATTTTTTCAGAAG
390 TTTCTATTTTTCACGATTTTTAAAAC-TTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAG
* *
21467385 GAGTTTTAGCCCCAAACTT-GTAGATGTGATCCTTGTATTTTTGTTGACATGCACAAAAAAATTC
454 GAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* *
21467449 AGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACAC
519 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
21467514 TTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
21467579 AGGTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAGGTACCAGCACCCATCGCACATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * *
21467644 CGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCATTGCCGTTGGTCAGGTTCTCCGGGGATG
714 CACACACCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCC-GGGATG
* *
21467709 CTCCGACGATGGTGCCACAATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
778 -TCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
*
21467774 TGCCGCAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
842 TGCCGCAACCCTCGATCCGGTC-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
21467826 CTTAGACTGGGAATGAACTCCATATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGCTCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCTCTCAAC
21467891 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * * * *
21467956 TGCTGGCATAACCCTTGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAACCCAA
131 TACTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
21468021 CCGACGAAACGAGTGGGCGGGCGGGCGCTACGCCAGCCAAAGAGACGGGATGCGCAAGCCGTGGA
196 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
21468086 TCTATAGGGTGGTAGGTAGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
* *
21468151 GCTTGTAAATTCATACAATGGTCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGC-CTGT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-GT
* *
21468215 TTTCTATTTTTCACAATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT-GGAAGG
390 TTTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGG
* *
21468279 AGTTTTGGCCCCAAACTTGGTAGATGTGGTCCTTGTATTTTTGTTGGCATGCACAAAACAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
21468344 GCTAAAAACTC-AATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
520 GCTAAAAACTCGAA-GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
21468408 TTTAATGGCTACTGGCAACAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
584 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * *
21468473 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTATCAGCACCCATCGCATATCATGTG
649 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * * *
21468538 CACACACTCCCCGACCCCCCCGATCGCCGGAACCCCAATACCGGCAGTCAGGTTGTCC--G--GT
714 CACACACCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGGATGT
* * *
21468599 -----GATGGTGCCCCGACGAAG-AAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTG
779 CCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
21468658 CCGC-A------A-CC---C--TC---GA-T----ATG-A-TCC-TAT-
844 CCGCAACCCTCGATCCGGTCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
21468682 CTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACGGAACGAGCGTGCGGG-TGCCCAA
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCT-CTCAA
* * *
21468746 CCGGCTAGAGGGACGGGATGCGTAAG-TGAGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCTG-GGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * *
21468810 CCTACTACCACAACCCTTGGTCCGATCCGATCTTAGACTGGGAATAAACCCCGTATGCCTAAGCC
129 CCTACTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
21468875 AACCGATGAAACGA----GCAGGTGGGCACTACGCTGGCCAGAGAGACAGGATGCGCAAGCCGTG
194 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
21468936 TGTCATGAGC
Statistics
Matches: 2583, Mismatches: 282, Indels: 105
0.87 0.09 0.04
Matches are distributed among these distances:
852 40 0.02
855 3 0.00
856 182 0.07
857 3 0.00
858 3 0.00
859 1 0.00
860 3 0.00
864 1 0.00
865 2 0.00
868 2 0.00
871 1 0.00
874 2 0.00
875 1 0.00
881 1 0.00
882 83 0.03
883 144 0.06
885 1 0.00
886 6 0.00
887 423 0.16
888 78 0.03
889 1 0.00
891 2 0.00
892 1 0.00
893 276 0.11
894 544 0.21
895 486 0.19
896 22 0.01
898 32 0.01
899 190 0.07
900 48 0.02
901 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (892 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCTCTCAAC
CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
TACTACCACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCA
CACACCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGGATGTCC
GACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
GCAACCCTCGATCCGGTCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:21477501 original size:26 final size:26
Alignment explanation
Indices: 21477472--21477524 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21477462 CCGGTCTGAT
21477472 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21477498 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21477524 C
1 C
21477525 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21478992 original size:776 final size:758
Alignment explanation
Indices: 21477120--21479256 Score: 2264
Period size: 776 Copynumber: 2.8 Consensus size: 758
21477110 TGGCATGCAC
** * **
21477120 AAAAAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACAATTTGAAAAAAGTGTACCCCA
1 AAAAAATTCAGCTAAAAACTCGAAGGGTACAAGATTTTGTAATGATTTGAAAAAAGTGT----C-
* * * *
21477185 TTTCAGACACTTTAATGGCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTG
61 TTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* ** *
21477250 TGAGTTCTCGAGTTTTGATGAGGCTTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGT
126 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* *
21477315 ACATCATGTGCGAACACCCCCCGATCACCGGAACCCCAATGTCGTC-AGTCAGGTTCT-TCGATG
191 ACATCATGTGCGCACACCCCCCGATCA-CGGAACCCCAATGCCGTCGA-TCAGGTTCTCT-GATG
* *
21477378 ATGCTTC-GGCGATGGTGCCCCGGGGAAGAAAAATGTGGCACCAGCACGTGCCCGAGCCCAGCAT
253 ATGCTTCTGGCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAT
*
21477442 GTGCTGTCGAAACCCTC-AGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
318 GTGCTGCCGAAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* *
21477506 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGACCA-A
382 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * *
21477570 AGG-GGGATGCACAAGCCGTGGATCGATCGGATCCGCCTCTGTGTGCTACCAATCCTGCTGTCGC
447 GGGCGGGATGCACAAGCCGTGGATCGATCGG-TCCGTCTCTGTGTGCTACCAATCCTGCTGCCGC
** * *
21477634 AACCCTCCA-TCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATG-CATAAGCTAACCGACAA
511 AACCCT-CAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCA-AAGCCAACCGACAA
* * * *
21477697 AACGAGCGGGCGGGCACTACACCGGCCAGGGAGACAGGATGTGCAAACCGTGGATCGATAGGGTG
574 AACAAGCGGGCGGGCACTACACCGGCCAGAGAGACAGCATGCGCAAACCGTGGATCGATAGGGTG
21477762 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATT
639 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATT
* * **** ** *
21477827 AATACAATGGTCCCAAACTTTGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATA
704 AATACAATGGTCCCAAAC--TCTAGACGTGATACTTGTATGCAAGACGACATGCATA
* *
21477884 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGATGATTTGAAAAAAGTGTCCCCAT
1 AAAAAATTCAGCTAAAAACTCGAAGGGTACAAGATTTTGTAATGATTTGAAAAAAGTGT---C-T
* * *
21477949 TTCATACACTTTAATTGCTACTGGAATCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
62 TTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * * *
21478014 GAGTTCTCAAGGTTTGATGAGGGATAGGGAGCCAATATACGGGCCAAGTACCCGTACCCATCGCA
127 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
** *
21478079 CATCATGTGCGCACACCCCGTCCGACCCCCCGATCAACGGAACCCCAATGCCACCGGTCAGGTTC
192 CATCATGTGCG--CA-------C-ACCCCCCGATC-ACGGAACCCCAATGCCGTCGATCAGGTTC
* * * * **
21478144 TCCGATGATGC-TCTGGGGATGGTGCCCCGATAAAGAAAAATACGGCACCAGCACATGCCC-ACG
246 TCTGATGATGCTTCTGGCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGA-G
* * * * * * *
21478207 CCCAGCATGTGCTACCGCAGCCCTCGATCCGGTCTGATCTTAGATTGGGAATGAACTACATCTGC
310 CCCAGCATGTGCTGCCGAAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
21478272 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTAAGCC
375 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
* * * * * * ** * *
21478337 GGCTAGAGGTGCGGGAAGCGCAAGCCATGGATCGGTTGGTCCGTCTCTACGTGCTGCCGATCCTG
440 GGCCAGAGG-GCGGGATGCACAAGCCGTGGATCGATCGGTCCGTCTCTGTGTGCTACCAATCCTG
* ** * *
21478402 CTACCATAACCCTCGGTCCAATCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGCCAACC
504 CTGCCGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGCCAACC
* ** * **
21478467 GACGAAACAAGCGGGCGGGCACTACGTCGGCCAGAGAGA-TGACATGCGCAAGTCGTGGATC-AG
569 GACAAAACAAGCGGGCGGGCACTACACCGGCCAGAGAGACAG-CATGCGCAAACCGTGGATCGA-
** *
21478530 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTT
632 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTT
* * * * **
21478595 GTAAATTCATACAATGGTCCCTTAAGC-CTCGACGTGA-AGTT-TCATGGCAAGACGAC-TCGTT
697 GTAAATTAATACAATGGTCCC--AAACTCTAGACGTGATACTTGT-AT-GCAAGACGACAT-GCA
*
21478656 TT
757 TA
** *** * * **** * * ** * **
21478658 CTATTTTTCACGATTTTCAAAACTTTTTGCGGT-CTGAGATTTTTTAAAATTTTTTCGGAAGGAG
1 AAAAAATTCA-G---CTAAAAACTCGAAG-GGTAC-AAGATTTTGT--AATGATTT-GAAAAAAG
*
21478722 T-T-TTTCAGACACTTTAATTGCTACTGGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAGGG
57 TGTCTTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
21478785 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA-AGAGGGCCAAGTACCAGCACCC
122 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA-AGGGCCAAGTACCAGCACCC
*
21478849 ATCGCACATCATGTGTGCACACCCCCCGATCGACGGAACCCCAATGCCGTCGATCAGGTTCTCTG
186 ATCGCACATCATGTGCGCACACCCCCCGATC-ACGGAACCCCAATGCCGTCGATCAGGTTCTCTG
* *
21478914 ATGATGCTTAGCGGTGCTCCAGCGATGGTGCCCCGGTGAAGAAAAATGTGACACCAACACATGCC
250 ATGATGCTT--C--TG-----GCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCC
* * * * * * * *
21478979 CGAGCCTAGCATGTGCTGCCGTAACCCTTGGTCCGATCCGATCTTAGACTAGGAATGAGCTCCGT
306 CGAGCCCAGCATGTGCTGCCGAAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
21479044 ATGCTTAGAATGGGAATGAACTCCATATGCCTAAGTCAACCCACGATACGAGCGTGCGGGCACTC
371 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * *
21479109 AGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGACTGGGTCCCAT-TCTGTGTGCTACCA
436 AGCCGGCCAGA-GGGCGGGATGCACAAGCCGTGGATCGA-TCGGT-CCGTCTCTGTGTGCTACCA
* * ** *
21479173 ATCCTGCTGCTGCAACCTTCAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
498 ATCCTGCTGCCGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAG
* * *
21479238 TCAACCCACAAAACGAGCG
563 CCAACCGACAAAACAAGCG
21479257 TGTGGGCGCG
Statistics
Matches: 1135, Mismatches: 186, Indels: 91
0.80 0.13 0.06
Matches are distributed among these distances:
763 131 0.12
764 56 0.05
765 1 0.00
766 47 0.04
767 2 0.00
769 1 0.00
771 2 0.00
772 5 0.00
773 207 0.18
774 27 0.02
775 205 0.18
776 327 0.29
777 90 0.08
778 12 0.01
779 10 0.01
781 6 0.01
782 6 0.01
ACGTcount: A:0.26, C:0.25, G:0.25, T:0.24
Consensus pattern (758 bp):
AAAAAATTCAGCTAAAAACTCGAAGGGTACAAGATTTTGTAATGATTTGAAAAAAGTGTCTTTCA
GACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCGATCACGGAACCCCAATGCCGTCGATCAGGTTCTCTGATGATGCTTCT
GGCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
GAAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGCGGGAT
GCACAAGCCGTGGATCGATCGGTCCGTCTCTGTGTGCTACCAATCCTGCTGCCGCAACCCTCAGT
CCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGCCAACCGACAAAACAAGCGGGCG
GGCACTACACCGGCCAGAGAGACAGCATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTAATACAATGGTC
CCAAACTCTAGACGTGATACTTGTATGCAAGACGACATGCATA
Found at i:21479050 original size:26 final size:26
Alignment explanation
Indices: 21479021--21479073 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
21479011 CCGATCCGAT
* * *
21479021 CTTAGACTAGGAATGAGCTCCGTATG
1 CTTAGAATAGGAATGAACTCCATATG
*
21479047 CTTAGAATGGGAATGAACTCCATATG
1 CTTAGAATAGGAATGAACTCCATATG
21479073 C
1 C
21479074 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGAATAGGAATGAACTCCATATG
Found at i:21479969 original size:25 final size:26
Alignment explanation
Indices: 21479935--21479986 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21479925 CCAGTCCAAT
21479935 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21479960 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21479986 C
1 C
21479987 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21480148 original size:26 final size:26
Alignment explanation
Indices: 21480119--21480171 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
21480109 TCGGTCTGAT
* * *
21480119 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGAAATGAACTCCGTATG
*
21480145 CTTATACTAGAAATGAACTCCGTATG
1 CTTAGACTAGAAATGAACTCCGTATG
21480171 C
1 C
21480172 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGAAATGAACTCCGTATG
Found at i:21480930 original size:26 final size:26
Alignment explanation
Indices: 21480901--21480953 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21480891 CCGATCCGAT
21480901 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21480927 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21480953 C
1 C
21480954 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21482410 original size:26 final size:26
Alignment explanation
Indices: 21482372--21482424 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21482362 CCGGTCCAAT
* *
21482372 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21482398 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21482424 C
1 C
21482425 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21483293 original size:26 final size:26
Alignment explanation
Indices: 21483254--21483306 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
21483244 CCGATTTGAT
** * *
21483254 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAAGAATCAACTCCGTATG
21483280 CTTAGACTAAGAATCAACTCCGTATG
1 CTTAGACTAAGAATCAACTCCGTATG
21483306 C
1 C
21483307 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTAAGAATCAACTCCGTATG
Found at i:21484554 original size:874 final size:870
Alignment explanation
Indices: 21481666--21485427 Score: 4420
Period size: 874 Copynumber: 4.3 Consensus size: 870
21481656 CTTGGTCCAG
* * * * *
21481666 TCTGATCTTAGACTGGGAATGAGCTCTGTATGCCTAAGCCAACTGACGAAACAAGCGGGCGGGCG
1 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG
* * * * * *
21481731 GGTAGGCGGGCACTACACCGGCCAAAGAGACAGGATGCGCAACCCGTGGATCGATAGGGTGGCAG
66 GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* * ** * *
21481796 GTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATCTCTTTTAAATTCATG
131 GTGGGTTTAGGCACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
21481861 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGA
196 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
** * * *
21481926 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTGGAAGGATTTTTGACCCCAAACA
261 TTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTGGAAGGAGTTTTG-GCCC--ACA
* * *
21481991 TGGTACACGTGATCCTTGTAATTTT-TTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTG
323 TGGTAGACGTGATCCATGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTG
* *
21482055 TACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGTAG
388 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
21482120 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGATTTCAC-ATGGTTTGATGGGGGATA
453 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATA
* *
21482184 GGGGGCCAA-ATAAGGGCCAAGTAACAGCACCCATCGCACATCATGTGTGCACACCCCCCGGCCC
517 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
* * *
21482248 CC-CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT-TCGGCGATACTCC---GGT------
582 CCTCGATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCTCT-GGCGATGCTCCGATGGTGCCCCG
* *
21482302 --GAAGAAAAAT-CTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCC
646 ACGAAAAAAAATAC-GACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCC
** * * * * * *** * ** *
21482364 GGTCCAATCTTAGACTGGGAATGAACTCTGTATG-CTTAGACTAGGAATG-AAC-TCCGTA--TG
710 GGTCTGATCCTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACGGG
* *** *** * * *
21482424 C-CTAAGTCAACCCATGAAACGAGCG-TGCATC---CTGGGGATCGGTCGGGTCCCCCTCTGCGT
775 CGCTCAG-CCGGCCA-GAGGGGCGGGATGCA-CAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGT
** * * *
21482484 GCTGCCGATCCTGCCGCCACAACCCTCGGTC-CA
837 GCTGCCGATCCTGCTACCGCAACCCTCAGTCTGA
* * * * * * *
21482517 GTCTAATCTTATACTGGGAATGAACTCTGTATGCCTAAGCCAACTGACAAAACGAGCGGACGGGC
1 -TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGC
* *
21482582 GGGCGGGCGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
65 GGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * * **
21482647 GGTGGGTTTAGGCACATCATCT-TATTTCTGCATGCCAATGAAATTTTTATGGCTTGTAAATTCA
130 GGTGGGTTTAGGCACATC-TTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
*
21482711 TACAATGGTCCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCA
194 TACAATGGTCCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
*
21482776 CGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGCGTTTTGGCACCA
258 CGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGC-CC-
* * * *
21482841 AACTTGGTAGACATGATCCATGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGA
320 -ACATGGTAGACGTGATCCATGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGA
*
21482906 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTGAGACACTTTAATGGCTACTG
384 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*
21482971 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
449 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* * ** *
21483036 ATAGGGGGCAAATATAAAGGTGAAGTACCCA-CACCCATCGTACATCATGTGCGCACACCCCCCG
514 ATAGGGGGCCAATATAAGGGCCAAGTA-CCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* * * * *
21483100 GCCCCTTCGATCGTCGGAACCCCAATGCCGCCGGTCATGTTCTCCGGCGATGCTCCGATGATGCT
578 GCCCCCTCGATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGATGGTGC-
*
21483165 CCGACGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
642 CC--CGA--------CGA--AA-AAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
** * * * *
21483230 CC-TAAACCCTCATTCCGATTTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTAAGAAT
694 CCGT-AACCCTCGGTCCGGTCTGATCCTAGACTGGGAATGAACTCTATATGC-----CTAAG--T
* ** * * *** * *
21483294 CAACTC-CGTATGCCTAAGTC-AACCCACGATCAGCCGGACAGAGGGGCGGGATGCACAAG-TAG
751 CAACCCACG-A-AAC-GAG-CGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCT-G
* * * * * * * * * * *
21483356 GGGATCGGCCAGATCCCCCTCTGTGCGTTGCTGATCTTGCTGCTGCAACCATCAGTCTGG
811 GGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGA
* *
21483416 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAACGGGCAGGCG
1 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG
* * * * * *
21483481 GGCGGGCGGGCACTACGTCGACTAAAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAG
66 GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
21483546 GTGGGTTTAGGCACATCTTCT-TATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
131 GTGGGTTTAGGCACATCTT-TATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* ** *
21483610 ACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAAAACTTGTTTTCTATTTTTCACG
195 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
21483675 ATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCC-CAT
260 ATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAA-TTTTTTGGAAGGAGTTTTGGCCCACAT
* * * * * * *
21483739 GGTAGATGTGATCCTTTTATTTTTGTTGGCACGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGA
324 GGTAGACGTGATCCATGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGT
* * *
21483804 ATAAGATTTTGTGACCATTTGAAACAAGCGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
389 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * * * *
21483869 AAACCTATAAAATTTCAAATCCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTCGATGAGGGATAGG
454 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
21483934 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC
519 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCC
** * *
21483999 CTCGATCC-CTGGAACCCCAATGCCATCTGTCAGGTTCTCTGACGATGCTCGGGCGATGGTGCCC
583 CTCGATCCTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTC---CGATGGTGCCC
* *
21484063 CGACGAAAAAAAATGCGACACCAGCACATGCCCGGGCCCAGCATGTGCTGCCGTAACCCTCGGTC
644 CGACGAAAAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTC
21484128 CGGTCTGATCCTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACGG
709 CGGTCTGATCCTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACGG
* * * *
21484193 GCGCTCAGCCTGCCAGAGGGGCGGGATG-AGCAAGTTGGGGATCGACCGGGTCCCCCTCTACGTG
774 GCGCTCAGCCGGCCAGAGGGGCGGGATGCA-CAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTG
* *
21484257 CTGCCGATCCTGCTACCGCAACCCTTAATCTGA
838 CTGCCGATCCTGCTACCGCAACCCTCAGTCTGA
* *
21484290 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGACT
1 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG
21484355 GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
66 GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* * *
21484420 GTGCGTTTAGGCACATCTTTATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAAATCATA
131 GTGGGTTTAGGCACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
21484485 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
196 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * *
21484550 TTTTCAAAACTTTTTGCGGTTTGGGATTTTTTTAAAATTTTTTGGAATGATTTTTGGTTCCAAAC
261 TTTTCAAAACTTTTTACGGTTTGGGA-TTTTTTAAAATTTTTTGGAAGGAGTTTTGG--CC-CAC
*
21484615 TTGGTAGACGTGATCCATGTA-TTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGT
322 ATGGTAGACGTGATCCATGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGT
*
21484679 GTACAAGATTTTGTGACCATTT-AAAAAGAGTGTCCCCATTTCAGACACTTTAATGGCTACAGGC
387 GTACAAGATTTTGTGACCATTTGAAAAA-AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
21484743 AGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
451 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
21484807 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
516 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
* *
21484872 CTCTCGATCCCCGGAACCCCAATGCCGCCGGTCAGGTTCTC---CGA-----CGATGGTGCCCCG
581 CCCTCGATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGATGGTGCCCCG
* * * *
21484929 ACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAACATGCT-CTACCATAACCCTCAGTCC
646 ACGAAAAAAAATACGACACCAGCACATGCCCGAGCCCAGCATG-TGCTGCCGTAA-CC-C--T-C
** *
21484993 GGTCCGATCTTAGACTCGGAATGAACTCCGTATGCTTAGACTACGAATGAACTCCATATGCCTAA
705 GGTCCG------G--TC----TG-A-T-C-----C-TAGACTGGGAATGAACTCTATATGCCTAA
* * * ** *
21485058 GTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGTAGGATGCACAAGCCGGGG
749 GTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCTGGGG
* * ** * *
21485123 ATCGG-CGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTACTGCAACCCTTGGTATGG
814 ATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCAGTCTGA
** * * *
21485179 TCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAACCAACAAAACGAGC--G--GGCG
1 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG
* *
21485240 GGT----GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAG
66 GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* * * *
21485301 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTGATT
131 GTGGGTTTAGGCACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
21485366 CAATGGTCCCTTAAGCCTTCACGTGAACTTTCATGGCAAGATGACTCGTTTTTTATTTTTCA
196 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
21485428 TGATCGAGGG
Statistics
Matches: 2517, Mismatches: 285, Indels: 187
0.84 0.10 0.06
Matches are distributed among these distances:
852 180 0.07
853 87 0.03
854 44 0.02
855 166 0.07
856 48 0.02
857 46 0.02
860 2 0.00
864 59 0.02
865 3 0.00
866 1 0.00
868 1 0.00
869 7 0.00
872 3 0.00
873 3 0.00
874 362 0.14
875 58 0.02
876 99 0.04
877 127 0.05
878 23 0.01
879 2 0.00
881 177 0.07
882 83 0.03
883 84 0.03
884 4 0.00
885 5 0.00
886 3 0.00
887 1 0.00
888 4 0.00
889 97 0.04
890 87 0.03
891 1 0.00
892 4 0.00
893 224 0.09
894 56 0.02
895 7 0.00
896 12 0.00
897 121 0.05
898 226 0.09
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (870 bp):
TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG
GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTTAGGCACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
TTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTGGAAGGAGTTTTGGCCCACATGG
TAGACGTGATCCATGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTAC
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCTC
GATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGATGGTGCCCCGACGAA
AAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCTG
ATCCTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCA
GCCGGCCAGAGGGGCGGGATGCACAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGAT
CCTGCTACCGCAACCCTCAGTCTGA
Found at i:21485030 original size:26 final size:26
Alignment explanation
Indices: 21485001--21485053 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
21484991 CCGGTCCGAT
*
21485001 CTTAGACT-CGGAATGAACTCCGTATG
1 CTTAGACTAC-GAATGAACTCCATATG
21485027 CTTAGACTACGAATGAACTCCATATG
1 CTTAGACTACGAATGAACTCCATATG
21485053 C
1 C
21485054 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCATATG
Found at i:21485669 original size:26 final size:26
Alignment explanation
Indices: 21485640--21485690 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
21485630 GATCCGATCC
21485640 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
*
21485666 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
21485691 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:21486308 original size:648 final size:640
Alignment explanation
Indices: 21484809--21486716 Score: 2423
Period size: 647 Copynumber: 3.0 Consensus size: 640
21484799 TGAGGGATAG
*
21484809 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCT
1 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCGCCCCT
21484874 CTCGATCCCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--CGA-------CGATGGTGCCC-C
65 CTCGATCCCCGGAA-CCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCGATGGTGCCCTC
* *
21484928 GACGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAACATGCT-CTACCATAACCCTCA-GT
129 GACGAA-AAAAATACGGCACCAGCACATGCCCGAGCCCAACATG-TGCTACCGTAACCCT-AGGT
* * * ** **
21484991 CCGGTCCGATCTTAGACTCGGAATGAACTCCGTATGCTTAGACTACGAATGAACTCCATATGCCT
191 CCGATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCT
* * * *
21485056 AAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGT-AGGATGCACAAGCCG
256 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGA-GATGCGCAAGCTG
* * * * * * **
21485120 GGGATCG-GCGGGTCCCCCTCTGCGTGCTGCCAATCCTGC-TACTGCAACCCTTGGTATGGTCCA
320 GGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCGT-C-GCAACCCTCGATCCGGTCCA
* * *
21485183 ATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAACCA-ACAAAACGAGCGGGCGGGT----
383 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CAGACGAAACGAACGGGCGGGTGGGC
* *
21485243 GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTT
447 GGGCACTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* *
21485308 TAGGCACATCTTCATA--T-TTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTGATTCAAT
512 TAGGCACATCTTCATATTTCTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACAAT
* *
21485370 GGTCCCTTAAGCCTTCACGTGAACTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATCGA
577 GGTCCCTTAAGCCTTCACGTGAA-GTTCATGGCAAGATGACTCATTTTTTATTTTTCATGATCGA
21485435 GGGCGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCAGCCCC
1 GGG-GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-GCCCC
* * * *
21485500 -CTCGTTCCCCGGAACCCTAATGCCACCGATCAGGTTCTCTGACGATGCTCGGGCGATGGTG-CC
64 TCTCGATCCCCGGAACCC-AATGCCGCCGGTCAGGTTCTCCGACGATGCTC-GGCGATGGTGCCC
** * * * *
21485563 TCGACGTAAAAAAATGTGGCACCAGCACATGCCCGGGCCCAGCATGTGCTGCCGTAACCCTCGGT
127 TCGACG-AAAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGTAACCCTAGGT
*
21485628 CCGATCCGATCCTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCT
191 CCGATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCT
* * *
21485693 AAGTCAACCCACAAAACGAGTGTGCGAGCGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCTGG
256 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCTGG
* * * *
21485758 GGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCCTGCGGTCGTAACCCTCGATCCGATCCGAT
321 GGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGC-GTCGCAACCCTCGATCCGGTCCAAT
*
21485823 CTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACAGACGAAACGAACGGGCAGACTGGTGGG
385 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAACGGGC-G---GGTGGG
*
21485888 CGGGCACTACGCCGGCCATAGAGACGGGATGCGCAGGCCGT-GATCCGATAGGGTGGTAGGT-GG
446 CGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGAT-CGATAGGGTGGTAGGTGGG
21485951 TTTAGGCACACATCTTCATATTTCTTCTAACGTGCCAATGCCATTTTTAT-GCGTTGTAAATTGA
510 TTTAGG--CACATCTTCATATTTCTTCT-ACGTGCCAATGCCATTTTTATGGC-TTGTAAATTGA
21486015 TACAATGGT-CCTTAAG-CTTCACGTGAAGTTCATGGC-AGAT-ACTCATTTTTTATTTTTTCAA
571 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTCATGGCAAGATGACTCATTTTTTA-TTTTTC-A
21486076 TGATCGA
634 TGATCGA
* *
21486083 GGGGCGAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACACCCCGCCCCT
1 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCGCCCCT
*
21486148 C-CGAT-CCCGG-ACCCAATGCCGTCGGGTCAGGTTCTCCGACGATGCTTCTGGCGATGGTGCCC
65 CTCGATCCCCGGAACCCAATGCCG-CCGGTCAGGTTCTCCGACGATGC-TC-GGCGATGGTGCCC
* * * * *
21486210 TATGGGCGAAAAAAATACGGCACCAGTTACATGCCCGAG-CCAACATGTGCTATCGCAACCCTAG
127 --TCGACGAAAAAAATACGGCACCAG-CACATGCCCGAGCCCAACATGTGCTACCGTAACCCTAG
21486274 GTCCGATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGC
189 GTCCGATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGC
* * * * * * *
21486339 CTAAGTC-ACCCACGAAACGAGCGTGCGGGTGCTTAGTCAGCCTGAGGGGCGAGATGCGTAAGCT
254 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCT
* * *
21486403 GGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCCCAACCCTCGATCCGGTCTA
319 GGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGC-GTCGCAACCCTCGATCCGGTCCA
* *
21486468 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A---GCGGGCGGGCG
383 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAACGGGCGGGTGGGCG
* * *
21486529 GGCACTACGCAGGCCAAAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTT
448 GGCACTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
21486594 AGGCACATCTTCATATTTC-TGT--GTGCCAATGCCATTTTTATGGCTTCTAAATTCGA-ACAAT
513 AGGCACATCTTCATATTTCTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATT-GATACAAT
* * * * * *
21486655 TGTCCCTTAAGCCTTCACGTTAAGTTTCTTGGCAAGACGACTCGTTTTCTATTTTTCATGAT
577 GGTCCCTTAAGCCTTCACGTGAAG-TTCATGGCAAGATGACTCATTTTTTATTTTTCATGAT
21486717 TTTTGAAACT
Statistics
Matches: 1123, Mismatches: 101, Indels: 105
0.84 0.08 0.08
Matches are distributed among these distances:
625 3 0.00
626 39 0.03
627 54 0.05
629 3 0.00
634 34 0.03
635 11 0.01
636 14 0.01
637 194 0.17
638 118 0.11
639 70 0.06
640 12 0.01
642 4 0.00
643 2 0.00
644 6 0.01
645 35 0.03
646 83 0.07
647 232 0.21
648 131 0.12
649 26 0.02
650 13 0.01
651 39 0.03
ACGTcount: A:0.24, C:0.28, G:0.26, T:0.22
Consensus pattern (640 bp):
GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCGCCCCTC
TCGATCCCCGGAACCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCGATGGTGCCCTCGA
CGAAAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGTAACCCTAGGTCCGAT
CCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTC
AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCTGGGGATC
GACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCGTCGCAACCCTCGATCCGGTCCAATCTTAGA
CTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAACGGGCGGGTGGGCGGGCACTAC
GCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
CTTCATATTTCTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTA
AGCCTTCACGTGAAGTTCATGGCAAGATGACTCATTTTTTATTTTTCATGATCGA
Found at i:21486317 original size:26 final size:26
Alignment explanation
Indices: 21486288--21486338 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
21486278 GATCCGATCC
21486288 TAGACTAGGAATGAACTCCGTATGCT
1 TAGACTAGGAATGAACTCCGTATGCT
* *
21486314 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
21486339 CTAAGTCACC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTAGGAATGAACTCCGTATGCT
Found at i:21487826 original size:881 final size:862
Alignment explanation
Indices: 21486312--21489059 Score: 3230
Period size: 881 Copynumber: 3.1 Consensus size: 862
21486302 ACTCCGTATG
* * * *
21486312 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTC-ACCCACGAAACGAGCGTGCGGGTGCTTAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
21486376 CAGCCTGAGGGGCGAGATGCGTAAGCTGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGTAAGC-GAGGATCGATCGGGTCCCCTTCTGCGTGCTG-CGATCC
* * * * * * *
21486441 TGCTGCCCCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
129 TACT---ACAACTCTAGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAA
*
21486506 CCGACG-AA-ACGAGCGGGCGGGCGGGCACTACGCAGGCCA-AAGAGACGGGATGCGCAAGCCGT
191 CCGACGAAAGACGAGCGGGCGGGCGGGCACTACGCTGGCCAGAA-AGACGGGATGCGCAAGCCGT
* **
21486568 GGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTT
255 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* *
21486633 ATGGCTTCTAAATTCGA-ACAATTGTCCCTTAAGCCTTCACGTTAAGTTTCTTGGCAAGACGACT
320 ATGGCTTATAAATTC-ATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACGACT
* * *
21486697 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAG-GGTTGGGGATTTTTTAAAATTTTTTGGG
384 CGTTTTCTATTTTTCATGATTTTCGAAAC-TTTTAGCGGTTCGGGATTTTTT-AAA-TTTTTCGG
* * *
21486761 AAGGAGTTTTGGCCTCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAA-
446 AAGGAGTTTTGGCC-CAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAT
*
21486825 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGA
510 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * **
21486890 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
575 CACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
21486955 TCGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
640 TGGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
21487020 GTGCGCACACCCCCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGATCAGGTTCTCCG
705 GTGCGCACA-CCCCCC-CG-CCCCCCCGATC-ACGAAACCCTAATGCCGTCGGTCAGGTTCTCCG
** * * * *
21487085 ACAACGCTTCGGCGATGGTGCCCCGGTGAAGAAAAATTCGGCACCAGCACATGCCCCAGCCCAGC
766 ATGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAATTCGGCACCAGCACATGCCCCAGCCCAAC
*
21487150 ATGTGCTGCTGCAACCCTCAGTCCGGTCCAAT
831 ATGCGCTGCTGCAACCCTCAGTCCGGTCCAAT
* **
21487182 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCATTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
21487247 CGGCCAGAGGGGCGGGATGCGTAAGTCAAGGATCGATCGGGTCCCCTTCTGTGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGTAAG-CGAGGATCGATCGGGTCCCCTTCTGCGTGCTG-CGATCC
* * * * * * *
21487312 TACTACTGTAACTCTTGATTTGGTTTGATCTTAGTCTAGGAATGAGCTCCGTATACGTAAGCCAA
129 TACTAC---AACTCTAGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAA
* * * *
21487377 CTGACGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCTGGCCAGAAAGGCAGGTTGCGCAA
191 CCGACGAAA-GA-C-GA---GCGGGCGGGCGGGCACTACGCTGGCCAGAAAGACGGGATGCGCAA
* ** *
21487442 GTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCACATGCCAATGCCT
250 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
21487507 TTTTTAATGGCTTATAAATTCATACAATTGTCCCTTAAG-CTGTCACGTGAAGTTTCTTGGCAGG
315 TTTTT-ATGGCTTATAAATTCATACAATTGTCCCTTAAGCCT-TCACGTGAAGTTTCTTGGCAAG
* * * ** *
21487571 ACAACTCGTTTTCTATTTTTCATGACTTTCGAAACTTTTCGCGGTTCAAGATTTATTAAACCTTT
378 ACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTAGCGGTTCGGGATTTTTTAAA--TTT
* * * * *
21487636 TTCAGAATGATTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCTTGCACAA
441 TTCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAA
*
21487701 AAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTGACCATTTGAAAAAAGTGTCCCCATT
505 AAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
21487766 TCAGACACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTG
570 TCAGACACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTG
21487831 AGTTCTGGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCAC
635 AGTTCTGGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCAC
* * * * *
21487896 ATCATGT--GCACA-CCCTCCGGCCCCCCGATCACTGAAACCTTAATACCGTCGGTTAGGTTCTC
700 ATCATGTGCGCACACCCCCCCGCCCCCCCGATCAC-GAAACCCTAATGCCGTCGGTCAGGTTCTC
* * *
21487958 TGATGATGCTCCGACGATGGTGCTCCGGGCGAAGAAAAATGT-GGCACCAGCACATG-CCCAGCC
764 CGATGATGCTCCGGCGATGGTGC-CCCGGCGAAGAAAAAT-TCGGCACCAGCACATGCCCCAGCC
* *
21488021 CAACATGCGCTG-TCGCAACCCTCGGTCTGGTCCGATCTTAGACTTGGAATGAACTCCGTAT
827 CAACATGCGCTGCT-GCAA--C-C---C---TCAG-TC-----C---G---G---TCC-AAT
* *
21488082 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCGCTCAG
1 -CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* ** * * *
21488147 CTGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCTG-TCAGGTCCCCTTCTGCGTCCTGC--TG
65 CCGGCCAGAGGGGCGGGATGCGTAAG-CGAGGATC-GATCGGGTCCCCTTCTGCGTGCTGCGATC
* * *
21488209 C-A--AC-CCTC-AG-TCTGGTCAGATCTGAGACTGGGAATGAACTCCGTA-AGCCTAAGCCAAC
128 CTACTACAACTCTAGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATA-CCTAAGCCAAC
* *
21488267 CGACGAAATGA--A-CGGGCGGGCGGGCACTACG-TAGGCCAGAGAGACGGGATGCGCAGGCCGT
192 CGACGAAA-GACGAGCGGGCGGGCGGGCACTACGCT-GGCCAGAAAGACGGGATGCGCAAGCCGT
* *
21488328 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTTTGCATGCCAATGCCATTTTT
255 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* * *
21488393 ATGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAAGTTTCATTGGCAAGACGAC
320 ATGGCTTATAAATTCATACAATTGTCCCTTAAGCCTTCACGTG-AAGTTTC-TTGGCAAGACGAC
* * * * * *
21488458 TCGTTTTCTATATTTCACGATTTTCAAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTGGA
383 TCGTTTTCTATTTTTCATGATTTTCGAAACTTTTAGCGGTTCGGGA-TTTTTTAAATTTTTCGGA
* * * *
21488523 AGGAGTTTTGACCCCAAACTTGGTCGACATGATCCATGTATTTTTTTTGGCATGCATAAAAAAAT
447 AGGAGTTTTG-GCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCA-AAAAAAAT
21488588 TT-AGCTAAAAACTCGAAGTGTACAAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAG
510 TTCAGCTAAAAACTCGAAGTGTAC-AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
21488651 ACACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
574 ACACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * *
21488716 CTGGAGGTTTGATGAGGGATAAGGGGCCAATATAACAGCCAAGTACTAGCACCCATCGTACATCA
639 CTGGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACATCA
* * * *
21488781 TGTGCGCAC-CCCCCCGGCCCCCCCGATCACCGAAACCCTATTGCCGCCGGTCAGGTTCTCCAAT
704 TGTGCGCACACCCCCCCGCCCCCCCGATCA-CGAAACCCTAATGCCGTCGGTCAGGTTCTCCGAT
* * * * *
21488845 GATGCTCCGGTGATGGTGCCCCGAGCAAAGAAAAATACGGCACTAGCACATGCCCGAGCCCAACA
768 GATGCTCCGGCGATGGTGCCCCG-GCGAAGAAAAATTCGGCACCAGCACATGCCCCAGCCCAACA
* * * *
21488910 GGCGCTGCCGCAACCCTCGGTCCGGTCCGAT
832 TGCGCTGCTGCAACCCTCAGTCCGGTCCAAT
* *
21488941 CTTAGACTTGGAATGAACTCCGTATGCCTAAGTCAA-CC-C---ACGAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
21489001 CGGCCAGAGGAGCGGGATGCACAAGCCGGGGATCTG-CCGGGTCCCCCTCTGCGTGCTGC
66 CGGCCAGAGGGGCGGGATGCGTAAG-CGAGGATC-GATCGGGTCCCCTTCTGCGTGCTGC
21489060 TGCAACCCTC
Statistics
Matches: 1617, Mismatches: 192, Indels: 155
0.82 0.10 0.08
Matches are distributed among these distances:
853 70 0.04
856 1 0.00
857 2 0.00
858 35 0.02
859 2 0.00
860 3 0.00
863 1 0.00
866 1 0.00
868 1 0.00
869 1 0.00
870 32 0.02
871 131 0.08
872 3 0.00
874 5 0.00
875 75 0.05
876 32 0.02
877 6 0.00
878 2 0.00
879 117 0.07
880 194 0.12
881 525 0.32
882 80 0.05
883 95 0.06
884 25 0.02
885 3 0.00
888 1 0.00
889 47 0.03
890 2 0.00
891 3 0.00
893 1 0.00
895 2 0.00
896 1 0.00
897 1 0.00
898 2 0.00
899 3 0.00
900 3 0.00
901 108 0.07
902 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (862 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGTAAGCGAGGATCGATCGGGTCCCCTTCTGCGTGCTGCGATCCTA
CTACAACTCTAGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGAC
GAAAGACGAGCGGGCGGGCGGGCACTACGCTGGCCAGAAAGACGGGATGCGCAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
TATAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACGACTCGTTTTC
TATTTTTCATGATTTTCGAAACTTTTAGCGGTTCGGGATTTTTTAAATTTTTCGGAAGGAGTTTT
GGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAATTTCAGCTAAAA
ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
CCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGGAGGTTTGA
TGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
CCCCCGCCCCCCCGATCACGAAACCCTAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGGCGA
TGGTGCCCCGGCGAAGAAAAATTCGGCACCAGCACATGCCCCAGCCCAACATGCGCTGCTGCAAC
CCTCAGTCCGGTCCAAT
Found at i:21488086 original size:26 final size:26
Alignment explanation
Indices: 21488057--21488109 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21488047 CTGGTCCGAT
*
21488057 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21488083 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21488109 C
1 C
21488110 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21491877 original size:26 final size:25
Alignment explanation
Indices: 21491835--21491886 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
21491825 CCAGTCCAAT
21491835 CTTAGACTAGAATGAACTCTGTATG
1 CTTAGACTAGAATGAACTCTGTATG
*
21491860 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACT-AGAATGAACTCTGTATG
21491886 C
1 C
21491887 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.29, C:0.17, G:0.23, T:0.31
Consensus pattern (25 bp):
CTTAGACTAGAATGAACTCTGTATG
Found at i:21494284 original size:26 final size:26
Alignment explanation
Indices: 21494246--21494298 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21494236 CCGGTCCAAT
* *
21494246 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21494272 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21494298 C
1 C
21494299 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21496915 original size:26 final size:26
Alignment explanation
Indices: 21496886--21496938 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
21496876 CTGGTCCGAT
*
21496886 CTTAGACT-CGGAATGAACTCCGTATG
1 CTTAGACTAC-GAATGAACTCCATATG
21496912 CTTAGACTACGAATGAACTCCATATG
1 CTTAGACTACGAATGAACTCCATATG
21496938 C
1 C
21496939 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCATATG
Found at i:21497555 original size:26 final size:26
Alignment explanation
Indices: 21497526--21497576 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
21497516 GATCCGATCC
21497526 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
* *
21497552 TAGATTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
21497577 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:21498224 original size:26 final size:26
Alignment explanation
Indices: 21498176--21498225 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
21498166 ATCCTATCCA
*
21498176 AGACTAGGAATGAACTCTATATGCTT
1 AGACTAGGAATGAACTCCATATGCTT
* *
21498202 AGACTGGGAATGAACTCCGTATGC
1 AGACTAGGAATGAACTCCATATGC
21498226 CTAAGTCACC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.32, C:0.18, G:0.24, T:0.26
Consensus pattern (26 bp):
AGACTAGGAATGAACTCCATATGCTT
Found at i:21498226 original size:649 final size:637
Alignment explanation
Indices: 21496693--21498603 Score: 2728
Period size: 638 Copynumber: 3.0 Consensus size: 637
21496683 GATGAGGGAT
*
21496693 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
1 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACC
*
21496758 CTCTCGATCCCGGAACCCCAATGCCGCCGGTCAGG-T-T---C--T-C-CGGCGATGGTGCCCCG
66 CCCTCGATCCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGACGATGCTCGGCGATGGTG-CCCG
* * *
21496814 ACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCACAACCCTCA-GTCT
130 ACGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCCT-AGGTCC
* * * ** *
21496878 GGTCCGATCTTAGACTCGGAATGAACTCCGTATGCTTAGACTACGAATGAACTCCATATGCCTAA
194 GATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * *
21496943 GTCAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGGT-AGGATGCACAAGCCGGG
259 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGA-GATGCACAAGCTGGG
* ** * * * * **
21497007 GATCGGCCGGGTCCCCCTCTGTGTGCTGCCGATCTTGCTGCTGCAACCCTCGGTATGGTCCAATC
323 GATCGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGATCCGGTCCAATC
* * *
21497072 TTAGACTGGGAATGAACTCCGTATGCTTAAGCCAACCA-ACAAAACGAGC-GA-ACGGGTGGGCA
388 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CAGACGAAACGAGCGGAGACGGGCGGGCA
* * *
21497134 CTACGTCGGCCAGAGAGACGGGATGCACAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
452 CTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* *
21497199 ACATCTTCATATTTCTACATGCCAATGCCATTTTTAT-GCTTGTAAATTGATTCAATGGTCCCTT
517 ACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTT
*
21497263 AAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTTTATTTTTCATGATCG
582 AAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATCG
* *
21497319 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAGACCCCCCAACC
1 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACC
**
21497384 CCCTCGATCCCCGGAACCCCAATGCCATCGGTCAGGTTCTCTGACGATGCTCGGGCGATGGTGCC
66 CCCTCGAT-CCCGGAACCCCAATGCCGCCGGTCAGGTTCTC-GACGATGCTC-GGCGATGGTGCC
* * * * * *
21497449 TCGAC-AAAGAAAAATGCGGCACCAGCACATGCCCGGGCCCAGCATGTGCTGCCGTAACCCTCGG
128 -CGACGAAA-AAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCCTAGG
* * * *
21497513 TTCGATCCGATCCTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCTGTATGCC
191 TCCGATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
21497578 TAAGTCAACCCACAAAACGAGTGTGCGAGCGCTCAGCCGGCCAGAGGGGTGAGATGCGCAAGCTG
256 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGAGATGCACAAGCTG
* * * *
21497643 GGGATCGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCGGCCGTAACCCTCGATCCGATCCGA
321 GGGATCGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGATCCGGTCCAA
21497708 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGCGGGCAGACTGGTGG
386 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGC-GG-AGAC----GG
21497773 GCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGG
445 GCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGG
21497838 TTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATG
510 TTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATG
*
21497903 GTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATCG
575 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATCG
*
21497966 AGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACACCCCCCGA
1 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCCGA
21498031 CCCCCTCGATCCTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCTGGCGATGGTG
64 CCCCCTCGATCC-CGGAACCCCAATGCCGCCGGTCAGGTTCT-CGACGATGCTC-GGCGATGGTG
* *
21498096 CCCAGGCGAAAAAAAATACGACACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCCTAG
126 CCC-GACGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCCTAG
* * * **
21498161 GTCCAATCCTATCCAAGACTAGGAATGAACTCTATATGCTTAGACTGGGAATGAACTCCGTATGC
190 GTCCGATCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * *
21498226 CTAAGTC-ACCCACGAAACGAGCGTGCGGGCGCTTAGTCGGCCCGAGGGGCGAGATGCACAAGCT
255 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGAGATGCACAAGCT
* * * *
21498290 GGGGATCGATCGGGTCCCCCTCTACGTGCTATCGATCCTGCTGCCCCAACCCTCGATCCGGTCTA
320 GGGGATCGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGATCCGGTCCA
* *
21498355 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGG-G-CGGGCGGG
385 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGCGGAGACGGGCGGG
* * *
21498418 CACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCATGGATTGATAGGGTGGTAGGTGGGTTTAG
450 CACTACGCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
** * *
21498483 GCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTCTAAATTCGA-ACAATTGTCC
515 GCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATT-GATACAATGGTCC
* * * *
21498547 CTTAAGCCTTCACGTTAAGTTTCTTGGCAAGACGACTCGTTTTCTATTTTTCATGAT
579 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGAT
21498604 TTTTGAAACT
Statistics
Matches: 1144, Mismatches: 108, Indels: 52
0.88 0.08 0.04
Matches are distributed among these distances:
626 69 0.06
627 25 0.02
628 1 0.00
629 1 0.00
633 1 0.00
635 1 0.00
636 1 0.00
637 7 0.01
638 269 0.24
639 1 0.00
640 179 0.16
641 3 0.00
642 2 0.00
644 1 0.00
645 1 0.00
646 106 0.09
647 132 0.12
648 159 0.14
649 181 0.16
650 4 0.00
ACGTcount: A:0.24, C:0.29, G:0.26, T:0.22
Consensus pattern (637 bp):
AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACC
CCCTCGATCCCGGAACCCCAATGCCGCCGGTCAGGTTCTCGACGATGCTCGGCGATGGTGCCCGA
CGAAAAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCCTAGGTCCGA
TCCGATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
CAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGAGATGCACAAGCTGGGGAT
CGACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGATCCGGTCCAATCTTA
GACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGCGGAGACGGGCGGGCACTAC
GCCGGCCAAAGAGACGGGATGCGCAGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
CTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGC
CTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCATGATCG
Found at i:21499751 original size:880 final size:868
Alignment explanation
Indices: 21498199--21502636 Score: 5261
Period size: 880 Copynumber: 5.1 Consensus size: 868
21498189 ACTCTATATG
* * *
21498199 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTC-ACCCACGAAACGAGCGTGCGGGCGCTTAGT
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
21498263 CGGCCCGAGGGGCGAGATGCACAAGCTGGGGATCGATCGGGTCCCCCTCTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCACAAGC-GGGGATCGATCGGGTCCCCCTCTGCGTGCT-GCGATCC
* * ** * * * *
21498328 TGCTGCCCCAACCCTC-GATCCGGTCTAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
129 TACTACTGCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCA
* *
21498392 ACCGACG--AAACGAGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCAT
193 ACCGACGAAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
* **
21498455 GGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTT
258 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
* * * *
21498520 ATGGCTTCTAAATTCGA-ACAATTGTCCCTTAAGCCTTCACGTTAAGTTTCTTGGCAAGACGACT
323 ATGGCTTGTAAATTC-ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
21498584 CGTTTTCTATTTTTCATGATTTTTGAAACTTTCTAG-GGTTGGGGATTTTTTAAAATTTTTTGGG
387 CGTTTTCTATTTTTCATGATTTTTGAAACTTT-TTGCGGTTCGGGATTTTTTAAAA-TTTTTCGG
* * *
21498648 AAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAA-
450 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAT
* * *
21498712 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCGTTTCAAAAAAATGTCCCCATTTCAGA
515 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
**
21498777 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
580 CACTTTAATGGCTACTGGCAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
21498842 TCGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGCACATCAT
645 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
21498907 GTGCGCACACCCCCCCTCGACCCCCCAATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
710 GTGCGCACACCCCCCC-CGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
** * ** * * * * *
21498972 CAATGCTTCGGTGATGGTGCCCCAGTGAAGAAAAATTCAGCACCAGCCCATGCCCCAGCCCAGCA
774 TGATGCTCCGACGATGGTGCCCC-GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* *
21499037 TGTGCTGCTGCAACCCTCAGTCCGGTCCAAT
838 TGTGCTGCTGCAACCCTCGGTCCGGTCCGAT
* * ** * *
21499068 CTTAGATTGGGAATGAACTCGGTATCCCTAAGTCAACTAACGAAACGAGCGGGCGGGCGTTCAGC
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
21499133 CGGCCAGAGGGGCGGGATGTACAAGTCGAGGATCGATCGGGTCCCCCTCTGTGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCACAAG-CGGGGATCGATCGGGTCCCCCTCTGCGTGCTG-CGATCC
* * * * * * *
21499198 TACTACTGCAACTCTCGGTTTGGT-TCGATCTTAGTCTAGGAATGAGCTCCGTATACGTAAGCCA
129 TACTACTGCAACCCTCAGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCA
* * *
21499262 ACCGACGAAATAAGCGAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAAAGACAGGTTGCGCA
193 ACCGACGAAA-AA-CG-A---GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
*
21499327 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCGCATGCCAATGCC
252 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * * * *
21499392 TTTTTTAATGGCTTATAAATTCATACAATGGTCCCATAAGCCTTCACGTGAAATTTCATGGCAGG
317 ATTTTT-ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * *
21499457 ACAACTCGTTTTCTATTTTTCATGACTTTCGAAACTTTTTGCGGTTCGAGATTTTTTAAACCTTT
381 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAA-ATTT
* * * * *
21499522 TTCAGAATGATTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCTTGCACAA
445 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA
*
21499587 AAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTCTGACCATTTGAAAAAAGTGTCCCCATT
510 AAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
21499652 TCAGACACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTG
575 TCAGACACTTTAATGGCTACTGGCAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
21499717 AGTTCTGGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCAC
640 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * *
21499782 ATCATGT--GCACA-CCCCCCGGCCCCCCCGATCACTGGAACCCTAATACCGTCGGTTAGGTTCT
705 ATCATGTGCGCACACCCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
*
21499844 CTGATGATGCTCCGACGATGGTGCCTCCGGGCGAAGAAAAATGCGGCACCAGCACATGCCC-AGC
770 CCGATGATGCTCCGACGATGGTGCC-CC--GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* *
21499908 CCAACATGCGCTG-TCGCAACCCTCGGTCTGGTCCGATCTTAGACTTGGAATGAACTCCGTAT
832 CCAGCATGTGCTGCT-GCAA-CC-C--TC--G---G-TC-----C---G---G---TCCG-AT
* * *
21499970 GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACGGGCGCTCAG
1 -CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* *
21500035 CCGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCTG-TCAGGT--CCC-C--C-T-CTGCG-T-
65 CCGGCCAGAGGGGCGGGATGCACAAG-CGGGGATC-GATCGGGTCCCCCTCTGCGTGCTGCGATC
* * *
21500090 C--CTGCTGCAACCCTCAGTCTGGTCAGATCTGAGACTGGGAATGAACTCCGTA-AGCCTAAGCC
128 CTACTACTGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATA-CCTAAGCC
* * ** *
21500152 AACCGACG--AAATGAACGGGCGGGCGGGCACTACGTAGGCCAGAGAGACGGGATGCGCAGGCCG
192 AACCGACGAAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
21500215 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCTTATTTTTGCATGCCAATGCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
21500280 TATGGCTTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * ** * * *
21500345 CGTTTTCTATATTTCACGGTTTTCAAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTTGGA
387 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGA-TTTTTTAAAATTTTTCGGA
* * * * *
21500410 AGGAGTTTTGACCCCAAACTTGGTCGACATGATCCATGTATTTTTTTTGGCATGCATAAAAAAAT
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCA-CAAAAAAT
21500475 TT-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGA
515 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
21500538 CACTTTAATGGCCATTGGGAGCAAACCTACAAAATCTCAAATGCTCTTTAA-AGGGTGTGAGTTC
580 CACTTTAATGGCTACTGGCAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
21500602 TGGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACATCAT
645 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * * *
21500667 GTGTG--CA-CCCCCCCGGCCCGCCGATCACCGGAACCCTATTGCCGTCGGTCAGGTTCTCCAAT
710 GTGCGCACACCCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAT
** * * * *
21500729 GATGCTCCGGTGATGGTGCCTCGGGCAAAGAAAAATGCGGCACTAGCACATGCCCGAGCCCAACA
775 GATGCTCCGACGATGGTGCC-C-CGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * *
21500794 TGCGCTACCGCAACCCTCGGTCCGGTCCGAT
838 TGTGCTGCTGCAACCCTCGGTCCGGTCCGAT
*
21500825 CTTAGACTT-GGAATGAACTCCGTATGCCTAAGTCAA-CC-C---ACGAGTGTGCGGGCGCTCAG
1 CTTAGA-TTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* *
21500884 CCGGCCAGAGGAGCGGGATGCACAAGCCGGGGATCTG-CCGGGTCCCCCTCTGCGTGCT--G---
65 CCGGCCAGAGGGGCGGGATGCACAAG-CGGGGATC-GATCGGGTCCCCCTCTGCGTGCTGCGATC
**
21500943 ------CTGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTA-AGCCTAAGCC
128 CTACTACTGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATA-CCTAAGCC
* * *
21501001 AACCGACGAAACGAGCGGGCGGGCGGGCGGGCAAGCACTACGCAGGCCAGAGAGACGGGATGCGC
192 AACCGACGAAA--AACGAGCGGGCGGGC-GG---GCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
21501066 AGGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGC
251 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
*
21501131 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAAGGCAAG
316 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
21501196 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTGCAGTTCGGGATTTTTAAAAATTTT
381 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * *
21501261 TCAGAAGGA-ATTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTTTTTTTGGCATGCACAAA
446 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* *
21501325 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTT
511 AAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
21501390 CAGACACTTTAATGGCTACTGGCAGCAAACCT-CTAAAATCTCAAATGCTCTTTAAGGGGGGTGT
576 CAGACACTTTAATGGCTACTGGCAGCAAACCTAC-AAAATCTCAAATGCTCTTTAA-GGGGGTGT
** * * * *
21501454 GAGTTCTTAAGGTTTGATGCGGGATAGTGGGCCATTATAAGGCCCAAGTACCAGCACCCATCGCA
639 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * *
21501519 CATCATGAGCGCACACCCCCCCGGCCCCCCCGATTGCCAGAACCCCAATGCTGCCGGTCAGGTTC
704 CATCATGTGCGCACACCCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * *
21501584 TCCGACGATACTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAACACATGCCCGAGCC
769 TCCGATGATGCTCCGACGATGGTGCCCCG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * *
21501649 CAGCATGTGATGCCGCAACCCCCGGTCCGGTCCGAT
833 CAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGAT
21501685 CTTAGACTGAGATTGAACTCTATAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
1 C-T----T---A--G---------A---T----TGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * ***
21501750 ACGGAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGTGTAAGCTGGGGATCGATCG
40 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGC-GGGGATCGATCG
* * * * ***
21501815 GGT-CCCCTCTGCGTGCTGCCGATCCTGCTACCG-TACCCTCAGCCCAATCTGATCTTAGACTGG
104 GGTCCCCCTCTGCGTGCTG-CGATCCTACTACTGCAACCCTCAGTCTGGTCTGATCTTAGACTGG
* *
21501878 GAATGAACTCCGTATGCCTAAGCCAACCGACG--AAACGA----GCGGGCGGGCACTACGTCGGC
168 GAATGAACTCCGTATACCTAAGCCAACCGACGAAAAACGAGCGGGCGGGCGGGCACTACGCCGGC
** *
21501937 CAGAGAGACGGGATGCGCAAGCTATGGATCGATAGGGTGGTCGGTGGGTTTAGGCACATCTTCAT
233 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
*
21502002 ATTTC--CATGAGCCAATGCCA-TTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTC
298 ATTTCTGCAT--GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
*
21502064 ACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGT
361 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGT
** * * *
21502129 TCAAGATTTTTTAAAATTCTTTTGGAAGGAGTTTTTGCCCCAAACTTGGTAGACGTGATCCTCGT
426 TCGGGATTTTTTAAAATT-TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGT
* * *
21502194 ATTTTTGTTGGCTTGCACAAAAAAATTT-AGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCA
490 ATTTTTTTTGGCATGCAC-AAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* **
21502258 TTTGAAGAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
554 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTACAAAATCTCA
*
21502323 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCC
619 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * *
21502388 AAGTACCAGCACCCATCGCACATCATGTGCGCACAACCTCCCCCCCCCCGCACCCCCTATCGTCG
684 AAGTACCAGCACCCATCGCACATCATGTGCGCAC-A-----CCCCCCCCGCCCCCCCGATCGCCG
* *
21502453 GAACCCCAATGCCGTCGGTCAGGTTC-CCTGGTGATGCTCCGACAATGGTGCCCCGACGAAGAAA
743 GAACCCCAATGCCGTCGGTCAGGTTCTCC-GATGATGCTCCGACGATGGTGCCCCG-CGAAGAAA
** * * * * * * * *
21502517 AATGCCACACCTGCACATGCTCGAGCCTAGCATGTGTTGCTGTAACCCTCGATCCGATCTGAT
806 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGAT
*
21502580 CTTAGATTGGGAATGAACTCCGTATGCCTAAG-CGAACCGACGAAACGAGCGTGCGGG
1 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTC-AACCCACGAAACGAGCGTGCGGG
21502637 TGGGCGGGCG
Statistics
Matches: 3096, Mismatches: 331, Indels: 284
0.83 0.09 0.08
Matches are distributed among these distances:
849 118 0.04
851 4 0.00
852 2 0.00
853 13 0.00
854 45 0.01
855 91 0.03
856 91 0.03
857 201 0.06
858 73 0.02
859 2 0.00
860 68 0.02
861 61 0.02
862 1 0.00
865 2 0.00
868 2 0.00
869 78 0.03
870 135 0.04
871 3 0.00
872 1 0.00
873 3 0.00
874 3 0.00
875 1 0.00
876 59 0.02
877 26 0.01
878 143 0.05
879 196 0.06
880 350 0.11
881 75 0.02
882 191 0.06
883 122 0.04
885 2 0.00
886 29 0.01
887 9 0.00
888 119 0.04
889 176 0.06
890 173 0.06
891 116 0.04
892 3 0.00
893 8 0.00
894 4 0.00
895 126 0.04
896 3 0.00
897 4 0.00
898 1 0.00
899 1 0.00
900 1 0.00
901 63 0.02
902 4 0.00
903 93 0.03
904 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (868 bp):
CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCACAAGCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCGATCCTA
CTACTGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACC
GACGAAAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTCGGAAGGAG
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAATTTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTACAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCT
CCGACGATGGTGCCCCGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
TGCAACCCTCGGTCCGGTCCGAT
Found at i:21499974 original size:26 final size:26
Alignment explanation
Indices: 21499945--21499997 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21499935 CTGGTCCGAT
*
21499945 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21499971 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21499997 C
1 C
21499998 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21503327 original size:26 final size:26
Alignment explanation
Indices: 21503298--21503376 Score: 106
Period size: 26 Copynumber: 3.0 Consensus size: 26
21503288 TCGGTTCGAT
*
21503298 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21503324 CTTAGACTGGGAATGAACTCCGTGTG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
21503350 CTTAGACT-GGAGATGCATTCCGTATG
1 CTTAGACTGGGA-ATGAACTCCGTATG
21503376 C
1 C
21503377 CTAAGGCAAC
Statistics
Matches: 47, Mismatches: 5, Indels: 2
0.87 0.09 0.04
Matches are distributed among these distances:
25 3 0.06
26 44 0.94
ACGTcount: A:0.24, C:0.19, G:0.28, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21506034 original size:26 final size:26
Alignment explanation
Indices: 21505994--21506046 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21505984 CCAATTCGAT
*
21505994 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGAAATGAACTCCGTATG
* *
21506020 CTTAGACTGGAAATGAACTCTGTATG
1 CTTAAACTGGAAATGAACTCCGTATG
21506046 C
1 C
21506047 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGAAATGAACTCCGTATG
Found at i:21506933 original size:26 final size:26
Alignment explanation
Indices: 21506893--21506945 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21506883 CTGGTCTGAT
* *
21506893 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGAAATGAACTCCGTATG
*
21506919 CTTACACTGGAAATGAACTCTGTATG
1 CTTACACTGGAAATGAACTCCGTATG
21506945 C
1 C
21506946 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTACACTGGAAATGAACTCCGTATG
Found at i:21507486 original size:893 final size:891
Alignment explanation
Indices: 21502578--21510466 Score: 9756
Period size: 893 Copynumber: 8.8 Consensus size: 891
21502568 ATCCGATCTG
* * *
21502578 ATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCGAACCGACGAAACGAGCGTGCGGGTGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GC--AT--GC-
* ** * *
21502643 GGCGAGCACTACGCCGACCAGAGAGACGGGATGCGCAAGGAGTGGATTGATAGGGTGGTAGGTCG
57 -G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
21502708 GTTTAGGCACATCTTCATATTTCTGCCTGCCAATGCCATTTTTATGGCTTGTGAATTCGTACAAT
119 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
21502773 GGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAGATGACTCGTTTTCTATTTTTCATGATTTT
184 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
21502838 CGAAACTTTTTGTGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GCCCCAAACTTGG
249 TGAAACTTTATGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* * *
21502902 TAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATCAGCTAAAAACTCGAAGTGTAC
314 TAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
*
21502967 AAGATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
379 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
21503032 ACCTGTAAAATATCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGG
444 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
21503097 GCCAATATAAGGGCCAAGTACCAGCATCGATCACACATCATGTGCGCACACCCCCTCGGCCCCCC
509 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCC
* * * * *
21503162 TGATTGCCGGAACCCCAATGCCGTCGGTCAGGTTC-CCAGGCGATGCTCCGACAATGGTGCCCTG
573 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GGCGATGCTCCGACGATGGTGCCCCG
** * * * *
21503226 GCGAAGAAAAATGCTACACCTGCACATTCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-TC
637 GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCT-
*
21503290 GGT-TCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTGTGCTTA
701 GGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-GG---GAA-------TG---A
* * **
21503354 GACTGGAGATGCATTCCGTATGCCTAAGGCAACCCATGAAACGAGCGTGCGGGCGCTCAATCGGC
751 -AC------T-C--T--GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * *
21503419 CAAAGGGGCGGGATGCGCAAGCCGAGGATAGGTTGGGTCCCCCTCTGCATGCTGCCGATCCTGCT
804 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACT
** * * ** *
21503484 TTCACAAACCTCAGTCCAGTCTA
869 GCCACAACCCTCGGTCTGGTCCA
* *
21503507 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACAAAACGAGCGAACGGGTGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--A----T-----
* *
21503572 GGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTTG
55 -GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
21503637 GTTTCGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCTTACAAT
119 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
21503702 GGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTT
184 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * *
21503767 TGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTCTTTT-GGAAGGAGTTTTTGCCCCAAACTTG
249 TGAAACTTTATGCGGTTCGAGATTTTTTAAAATT-TTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* * * * *
21503831 GTAGACGTGATCCTCGTATTTTTGTTGGCTTGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTA
313 GTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
* *
21503896 CAGGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
378 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
21503961 AACCTGTAAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
443 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
21504026 GGCCAAGATAAGGGCCAAGTACCTGCACCCATCGCACATCATGTGCGCACACCCACCGGCCCCCC
508 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* * * * * * *
21504091 CGACCGCCGGAACCCCAATGTCGCCGGTCAAGTTCTCCAGTGATGCTCCGACGATGGTGCACCGA
573 CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGG
* * * * **
21504156 CGAAGAAAAATGCGGCACTAGCACATGCTCGAGCCCACCATGTGCTGAT-GCAACCCTTGGTCCA
638 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-TCGCAACCCTCGGTCTG
* * * ** * *
21504220 ATCTGATCTTAGACTGGGAATGAACTCTGTATGCTTGGGGTAGGAATGAACTCCGTATGCCTAAG
702 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAG
* * * * * * *
21504285 TCAACCCACGAAACAAGCGTCCAGGTGCTCAGCCGGCCAGAGGGGTGAGATGCGCTAGCCGGGGA
767 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * ** * * *
21504350 TCGG-CTGGGTCACCCTGTACGTGCTACCGATCCTACT-CTGCAACCCTCGATCTGGTTCG
832 TCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCCA
* * * **
21504409 ATCTTAGACTAGGAATGAACACCGTATGCCTAAGCCAACCGACGAAACAAGCGGCGGGCGGGCAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-AGCATGCGGGCAC
* * * * *
21504474 TGCACCGGCTAGAGAGACGAGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
63 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
21504539 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT-CCTTA
128 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * * * **
21504603 AGCCTTCATCGTGAAGTTTCATGGTAAGACAACTCATTTTTTATTTTTCACGATTTTCAAAACTT
193 AGCCTTCA-CGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* * * * * *
21504668 TTTGCGGTTCGAGATTTTTCAAAATTTTTTCAGAAGGAGTTTTGGCCCTAAACTTGGTAGGCTTG
257 TATGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATG
* * * *
21504733 ATCCTTGTATTTTTTTTGGCCATGCACAAAAAAATTCAGCAAAAAAATCAAAGTATACAAGATTT
322 ATCCTTGTATTTTTGTTGG-CATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTT
*
21504798 TGTGACCATTTG-AAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTA
386 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
21504862 AAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATA
451 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * * * **
21504927 TAAGGGCCAAGTACCAGCACTCATCGCACATCATGAGCACACA-CCCCCAG-CCCCCCAATCATC
516 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCC
* * * *
21504990 GGAATCCCAATGCCGCTGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGTGAAGAAA
581 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAA
* * * * * *
21505055 AATGTGGCACCAGCACATGCCCGAGCCTAGCATATGC-GGCTGCAACCCTCAGTCTGGTCCGATC
646 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC-GCAACCCTCGGTCTGGTCTGATC
*
21505119 TTAGACTGGGAATGAACT-CGATATGGTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCC
710 TTAGACTGGGAATGAACTCCG-TATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCC
* ** * * *
21505183 ACGAAACGAGCGTGCGGGCGCTCAGTCGGATAGAGGGGCGAGATGCACAATCCGGGGATCGGTCG
774 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* * * * *
21505248 GGTCCCCCTCTGCGTGCTGCTGATCCTACTACCGCAACCCTCAGTTTGGTCCA
839 GGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCCA
** * * * *
21505301 ATCTTAGACTATGAATGAACTCCGTATGCCCAAGCCAACCGACGAAACAAGCGTGCGGGCACTAT
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCACTAC
* *
21505366 GCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTCGGTGGGTTTAGGCACAT
66 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
21505431 CTTTATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGAAAATT-ATACAATGGTCCCTTAAGC
131 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
**
21505495 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTATG
196 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTATG
* * * * *
21505560 CCGTTCGAGATTTTTTAAAACTTTTTCGGAAGGCGTTTTGGCTCCAAACTTGGTAAACATGATCC
261 CGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCC
** * * *
21505625 TTCCACTTTTT-TTGGTATGCAAAAAAAAATTCAGCTGAAAACTCAAAGTGTACAAGATTTTGTG
326 TTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTG
* * * * *
21505689 ACCATTTGAAAAATGTGTCCCCATTTCAGATAATTTAACGGCTACTGGTAGCAAACCTGTAAAAT
390 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
21505754 CTCAAATGCTCTTTACGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
455 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * * *
21505819 GGCCAAGTACCAGCACCCATCGCATATCATGTGTGCACACCCCCGCGACCCCCCCGATCGTCGGA
520 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCCGATCGCCGGA
* * * *
21505884 ACCCCAATGCTGCCGGTTATGTTCTCCGACGATGCTCCGACGATGGTG-CCC--C----------
584 ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAAT
* ** * ***
21505936 G-GG-ACCAGCACATGCCCGAGCCTAGCATGTGCTACCGCAACCCTCGATCCAAT-TCGATCTTA
649 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCT-GATCTTA
* * *
21505998 AACTGGGAATGAACTCCGTATGCTTAGACTGGAAATGAACTCTGTATGCCTAAGTCAACCCATGA
713 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGA
* * * * * * * *
21506063 AACGAGCGTAC-AGCTACTCAACCAGCCAGAGAGGCGGGATGCGTAAGCCGGGGATCGATCGGGT
778 AACGAGCGTGCGGGC-GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* * * * * * *
21506127 CCCCCTCTGCGTGCTGTC-ATTCCTACTACCGCAACCCTTGGTC-CGACCTG
842 CCCCCTCTGCGTGCTGCCGA-TCCTACTGCCACAACCCTCGGTCTGGTCC-A
* * * * **
21506177 ATCATAGACAGGGAATGAACTCCGTATGCCTAAGCCAACCAATGAAACGAGCGGGCGGGCGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCATGC--G-G
*
21506242 AGCACTACGCCGGACAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
59 -GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
21506307 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAAGGCTTGTAAATTCATACAATGGT-
123 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* **
21506371 CCTTAAGCCTTGACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAA
188 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* *
21506436 ACTTTATGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
253 ACTTTATGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
** * * * *
21506501 TGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCAAAAAAATCAAAGTATACAAGA
318 CATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGA
21506566 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
383 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
*
21506631 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCA
448 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
21506696 GTATAAGGGCCAAGTATCAGCACCCATCGCACATCATGTGCGCACAACCCCCCGGCCCCCCCAAT
513 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCGGCCCCCCCGAT
* * * * *
21506761 CGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAA
577 CGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAA
* *
21506826 GAAAAATGCGGCACCAGCGCATGCCCGAGCCCAGCATGTGCTGTCGGAACCCTCGGTCTGGTCTG
642 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTG
* *
21506891 ATCTTAGACTGGGAATGAACTCCGTATGCTTACACTGGAAATGAACTCTGTATGCCTAAGTCAAC
707 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAAC
* * * *
21506956 CCACGAAACGAGCGTGTGGGCGCTCAGCCGGACAGAGGGGCGGGATGCACAAGCCGAGGATCGGT
772 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGT
* * * *
21507021 CGGGTCCCCCTCTGTGTGCTGCCAATCCTGCTGCCACAACCCTCGGTCTGGTCCG
837 CGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCCA
* * * *
21507076 ATCTTAGGCTGTGAATGAACTACGTATGCCTAAGCCAACTGACGAAACGAGCATGCGGGCACTAC
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCACTAC
* * *
21507141 GGCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACAT
66 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * * *
21507206 CTTTTATATTTTTAG-GTGCCAATGCCATTTTTATGGCTTGAAAATTCATACAATGGTCCCTTAA
131 C-TTCATATTTCT-GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * *
21507270 GCCTTCACGTGAAGTTTCATGGCAATACGACTTGTTTTCTATTTTTCACGATTTTCGAAACTTTA
194 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTA
*
21507335 TGCGGTTCGAGATTTTTT-AAATCTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGAAGACATGA
259 TGCGGTTCGAGATTTTTTAAAAT-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGA
* * * * * *
21507399 TCCTTCTACTTTTGTTGGTATGCATAAAAAAATTCACCAAAAAACTCAAAGTGTACAAGATTTTG
323 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTG
* * * *
21507464 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAACGGCTACTGGCAGCAAACCAGAAAA
388 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
21507529 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTTATGAGGGATAGGGGGCCAATATA
453 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * *
21507594 AGGGCCAAGTACCAGTACCCATCGCACATCATGTGCGTACACCTCCCCGACCCCCTCGATCGTCG
518 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCCGATCGCCG
* * ** * *
21507659 GAACACTAATGCCATCGTTCAGGTTCTCCGACGATGCTCCGACGATGGTG--CC--C--------
582 GAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAA
* **
21507712 ---CGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGTCGCAACCCTCGGTCCAGTCTGATCTT
647 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTT
*
21507774 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATG
712 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACG
** * *
21507839 AAACGAGCGTGTAGGCGCTCAGCCGGCCAGAGGGGCGGGATACGCAAGCCGGGGATCGATCGGGT
777 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* * * *
21507904 CCCCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTTGGTCTGG-CCTG
842 CCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCC-A
* * * * ** *
21507954 ATCATAGACTAGGAATGAACTCCGTATTCCTAAGCCAATCGGTGAAACGAGCGGGTAGGCGAGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC----A----TGCG
* * *
21508019 GGCACTATGCCAGCCAGAGAGACGGGATGCGCTAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
58 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
21508084 AGGCACATCTTCATATTTCTACATGCCAATGCCGTTTTTATGGCTTGTAAATTCATACAATGGTC
123 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
*
21508149 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAA
188 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* * * * * *
21508214 ACTTTATGCAGTTCAAGATTTTTTAAAATTTTTTCGAAAGCATTTTTGGCCGCAAACTTGGTAGA
253 ACTTTATGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * ** * * *
21508279 CGTGATCCTTGTATTTTTATTGGTTTGCATAAAAACATTCAGCTAAAAAAT-AGAAGTGTACAAG
318 CATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA-AAGTGTACAAG
* * *
21508343 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGTCTACTAGCAGCAAACC
382 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
** * *
21508408 TGTAAAATCTCAAATGCTCTTTAAGGGGGCATGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCC
447 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * *
21508473 AATATAAGGGCCAAGTACCTGCACCCATTGCGCATCATGTGCGCACATCCCCCCGGCCCCCCCGA
512 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGA
* * * *
21508538 TCGCCGGAACCCCAATGCCGTCGGTTAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGGTGA
576 TCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGA
* * * *
21508603 AGAAAAATGCGGCACCAGCACCTGCTCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGATCC
641 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCT
* * * * * *
21508668 GATCTTAGACTGGGAATGAACTTCATATGCTGAGACTGGGAATGAACCCCGTATGCCAAAGTCAA
706 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAA
* * * * * * * * **
21508733 CTCACGAAATGAGCATGCGGGCGTTCAGTCGGACAGAGGGGTGGGATGCACAAGGTGGGGATC-G
771 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
* * * ** ** *
21508797 ACGGGGTCCCCCACTGCGTGCTGCCAATCAAACTGCCGTAACCCTCGGTCTAGTCCA
836 TC-GGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCCA
*
21508854 ATCTAAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAATGGGC-TGGCGGGC
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A---GCAT-----GC
* * * * * * *
21508918 GGGCACTACGTCGGCCTGAGAGATGGGAAGTGCAAGCCGTGGATCGATTGGG-GAGTAGTTGGGT
57 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG-GTAGGTGGGT
* * *
21508982 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTCATGGCTTGTAAATTCATACAATGT
121 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
21509047 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTG
186 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * *
21509112 AAACTTTTTGCGGTT-TAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGTCCCAAACTTGAT
251 AAACTTTATGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * *
21509176 ATACGTGATCCTTGTATTTTGGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTC-AAGTGTAC
315 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC-TCAAAGTGTAC
* * *
21509240 AAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTCCAGACACTTTAATGTCTACTGGTAGCAA
379 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
21509304 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGCATAGGGG
444 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
21509369 GCC-A-AT--------A-T---AGCACCCATCGCACATCATTTGTGCACACCCCCTGGCCCCCCC
509 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* * * *
21509420 GATCGCCGGAACCCCAATGTCACCGGTCAAG---T-------T-CTCCGACGATGGTGCCCCGGT
574 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGC
* * * * *
21509474 GAACAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTAGCAACCCTAGGTCCGGC
639 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGT
** * *
21509539 CTGATCTTAGACTGAAAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
704 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTC
* * * *
21509604 AACCCACGAAACGAGCTTGTGGGCGCTCAGACGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC
769 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
** * * **
21509669 GACCGGGTCCCCCTCTGCGTGCTGTCGATCCTGA-TGCCACAACTCTCAATCTGGTCCA
834 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCT-ACTGCCACAACCCTCGGTCTGGTCCA
*
21509727 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGAGCGGGTGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-A-----T--GCG
21509792 GGCACTACGCCGGCCAGAGAGAC-----GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
58 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
21509852 AGGCACATCTTCATATTTATGCATGCCAATGCCATTTTTATGGCATGTAAATTCATGCAATGGTC
123 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
21509917 CCTTAAGCCTTCACGTGAAGTTTCATGGCTAGACGACTCGTTTTCTATTTTTCACCATTTTTGAA
188 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
*
21509982 ACTTCT-TGCGGTTC-AGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGGTA
253 ACTT-TATGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
*
21510045 GACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
316 GACATGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCAAAGTGTACA
* * *
21510110 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATACTTTAATGCCTACTGGCAACAAA
380 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
21510175 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGTGGTTTGATGAGGGATAGGGGG
445 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
21510240 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCACCCCC
510 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCC
** ** ** **
21510305 GATCAACGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGGTGATGGTGCCCCAAC
574 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGC
* * * *
21510370 GAAGAAGAATGAGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTTTGGT
639 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGT
* *
21510435 CTGATCTTCGACTGGGAATGAACTCCATATGC
704 CTGATCTTAGACTGGGAATGAACTCCGTATGC
21510467 CTAAGCCAAC
Statistics
Matches: 6042, Mismatches: 761, Indels: 347
0.85 0.11 0.05
Matches are distributed among these distances:
868 238 0.04
869 61 0.01
870 94 0.02
871 1 0.00
872 3 0.00
873 302 0.05
874 3 0.00
875 6 0.00
876 231 0.04
877 7 0.00
878 264 0.04
880 6 0.00
881 2 0.00
882 2 0.00
883 6 0.00
884 566 0.09
885 518 0.09
886 77 0.01
887 54 0.01
888 269 0.04
889 137 0.02
890 6 0.00
891 372 0.06
892 140 0.02
893 789 0.13
894 50 0.01
895 5 0.00
896 101 0.02
897 3 0.00
898 3 0.00
899 333 0.06
900 558 0.09
901 4 0.00
902 55 0.01
903 91 0.02
904 3 0.00
905 2 0.00
907 1 0.00
908 1 0.00
914 2 0.00
915 1 0.00
918 2 0.00
925 6 0.00
928 1 0.00
929 408 0.07
930 253 0.04
931 1 0.00
933 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCACTAC
GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTATG
CGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCC
TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGA
CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAAC
CCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGC
GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGAC
TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAAC
GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCC
CTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCGGTCTGGTCCA
Found at i:21507807 original size:26 final size:26
Alignment explanation
Indices: 21507771--21507823 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21507761 CCAGTCTGAT
21507771 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21507797 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21507823 C
1 C
21507824 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21508722 original size:26 final size:26
Alignment explanation
Indices: 21508674--21508723 Score: 73
Period size: 26 Copynumber: 1.9 Consensus size: 26
21508664 ATCCGATCTT
**
21508674 AGACTGGGAATGAACTTCATATGCTG
1 AGACTGGGAATGAACCCCATATGCTG
*
21508700 AGACTGGGAATGAACCCCGTATGC
1 AGACTGGGAATGAACCCCATATGC
21508724 CAAAGTCAAC
Statistics
Matches: 21, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.30, C:0.20, G:0.28, T:0.22
Consensus pattern (26 bp):
AGACTGGGAATGAACCCCATATGCTG
Done.