Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35885061
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Warning! 165000 characters in sequence are not A, C, G, or T
File 129 of 195
Found at i:21894975 original size:20 final size:18
Alignment explanation
Indices: 21894941--21894984 Score: 54
Period size: 19 Copynumber: 2.3 Consensus size: 18
21894931 TATTTATATG
21894941 TAATTTATTTATATAGTTA
1 TAATTTATTTATATA-TTA
21894960 TATATTTA-TTATTATATTA
1 TA-ATTTATTTA-TATATTA
21894979 TAATTT
1 TAATTT
21894985 TTTTTTCTGG
Statistics
Matches: 23, Mismatches: 0, Indels: 5
0.82 0.00 0.18
Matches are distributed among these distances:
18 4 0.17
19 10 0.43
20 9 0.39
ACGTcount: A:0.36, C:0.00, G:0.02, T:0.61
Consensus pattern (18 bp):
TAATTTATTTATATATTA
Found at i:21895091 original size:22 final size:21
Alignment explanation
Indices: 21895019--21895093 Score: 66
Period size: 18 Copynumber: 3.4 Consensus size: 21
21895009 TTAATTTATT
*
21895019 TTATTTTTTAATTATCTGTTAAA
1 TTATTTTTTATTTATCTGTT--A
21895042 TTTATTTTATTCATTTATCTG--A
1 -TTATTTT-TT-ATTTATCTGTTA
21895064 TT-TTTTTTATTTATCTGATTA
1 TTATTTTTTATTTATCTG-TTA
21895085 TTATTTTTT
1 TTATTTTTT
21895094 TTCTTTTTTT
Statistics
Matches: 44, Mismatches: 1, Indels: 14
0.75 0.02 0.24
Matches are distributed among these distances:
18 9 0.20
19 2 0.05
20 4 0.09
21 5 0.11
22 7 0.16
24 7 0.16
25 2 0.05
26 8 0.18
ACGTcount: A:0.23, C:0.05, G:0.04, T:0.68
Consensus pattern (21 bp):
TTATTTTTTATTTATCTGTTA
Found at i:21895956 original size:13 final size:13
Alignment explanation
Indices: 21895940--21895964 Score: 50
Period size: 13 Copynumber: 1.9 Consensus size: 13
21895930 TTCCAAAAAT
21895940 TTTTATTTATTTG
1 TTTTATTTATTTG
21895953 TTTTATTTATTT
1 TTTTATTTATTT
21895965 ATTTATTAGA
Statistics
Matches: 12, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
13 12 1.00
ACGTcount: A:0.16, C:0.00, G:0.04, T:0.80
Consensus pattern (13 bp):
TTTTATTTATTTG
Found at i:21895965 original size:21 final size:21
Alignment explanation
Indices: 21895941--21896050 Score: 75
Period size: 21 Copynumber: 5.1 Consensus size: 21
21895931 TCCAAAAATT
21895941 TTTATTTATTTGTTTTATTTA
1 TTTATTTATTTGTTTTATTTA
* **
21895962 TTTATTTATTAGATTAGATTTA
1 TTTATTTATTTG-TTTTATTTA
*
21895984 TTTA-ATATTT-TTTTATCTTA
1 TTTATTTATTTGTTTTAT-TTA
* *
21896004 TTT-TTATTTTTGTTTTACTTTTC
1 TTTATT-TATTTGTTTTA--TTTA
*
21896027 TTTATTT-TTTATCTTTATTTA
1 TTTATTTATTTGT-TTTATTTA
21896048 TTT
1 TTT
21896051 TCACTTTTAT
Statistics
Matches: 68, Mismatches: 12, Indels: 18
0.69 0.12 0.18
Matches are distributed among these distances:
19 4 0.06
20 6 0.09
21 25 0.37
22 20 0.29
23 10 0.15
24 3 0.04
ACGTcount: A:0.20, C:0.04, G:0.04, T:0.73
Consensus pattern (21 bp):
TTTATTTATTTGTTTTATTTA
Found at i:21896025 original size:17 final size:16
Alignment explanation
Indices: 21896005--21896063 Score: 57
Period size: 17 Copynumber: 3.6 Consensus size: 16
21895995 TTTATCTTAT
21896005 TTTTATTTTTGTTTTAC
1 TTTTATTTTT-TTTTAC
*
21896022 TTTTCTTTATTTTTTA-
1 TTTTATTT-TTTTTTAC
* *
21896038 TCTTTATTTATTTTCAC
1 T-TTTATTTTTTTTTAC
21896055 TTTTATTTT
1 TTTTATTTT
21896064 ATTCTATTTT
Statistics
Matches: 34, Mismatches: 5, Indels: 7
0.74 0.11 0.15
Matches are distributed among these distances:
16 13 0.38
17 19 0.56
18 2 0.06
ACGTcount: A:0.14, C:0.08, G:0.02, T:0.76
Consensus pattern (16 bp):
TTTTATTTTTTTTTAC
Found at i:21896059 original size:39 final size:39
Alignment explanation
Indices: 21895992--21896073 Score: 96
Period size: 39 Copynumber: 2.1 Consensus size: 39
21895982 TATTTAATAT
* ** *
21895992 TTTTTTATCTTATTTTTATTTTTGTTTTACTTTTCTT-TA
1 TTTTTTATCTTATATTTATTTTACTTTTA-TTTTATTCTA
21896031 TTTTTTATCTT-TATTTATTTTCACTTTTATTTTATTCTA
1 TTTTTTATCTTATATTTATTTT-ACTTTTATTTTATTCTA
21896070 TTTT
1 TTTT
21896074 CTTTAAATAA
Statistics
Matches: 37, Mismatches: 4, Indels: 4
0.82 0.09 0.09
Matches are distributed among these distances:
38 15 0.41
39 22 0.59
ACGTcount: A:0.15, C:0.09, G:0.01, T:0.76
Consensus pattern (39 bp):
TTTTTTATCTTATATTTATTTTACTTTTATTTTATTCTA
Found at i:21896071 original size:22 final size:22
Alignment explanation
Indices: 21896033--21896074 Score: 68
Period size: 22 Copynumber: 1.9 Consensus size: 22
21896023 TTTCTTTATT
21896033 TTTTATCTTTATTTATTTTCAC
1 TTTTATCTTTATTTATTTTCAC
21896055 TTTTAT-TTTATTCTATTTTC
1 TTTTATCTTTATT-TATTTTC
21896075 TTTAAATAAA
Statistics
Matches: 19, Mismatches: 0, Indels: 2
0.90 0.00 0.10
Matches are distributed among these distances:
21 6 0.32
22 13 0.68
ACGTcount: A:0.17, C:0.12, G:0.00, T:0.71
Consensus pattern (22 bp):
TTTTATCTTTATTTATTTTCAC
Found at i:21896155 original size:59 final size:59
Alignment explanation
Indices: 21896081--21896376 Score: 395
Period size: 59 Copynumber: 5.0 Consensus size: 59
21896071 TTTCTTTAAA
*
21896081 TAAAAATCAAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCTT
1 TAAAAAT--AAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
*** *
21896142 TAAAAATAAATTT-CAAAAAGGGT-TTTTGA-GGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
*
21896198 TGAAAATCAAAATTTCC-AAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT--AAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
* *
21896258 TAAAAATAAATTTTCAAAAAAAATATTTTTAGGGAAAAGTTGAAAATATCAATTTTCCT
1 TAAAAATAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
* ** *
21896317 TAAAAATAAATTTTCAAAAAAAAGGGTTTTT-GAAGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAATTTCCAAAAAAAA-TATTTTTAG-GGAAAAGTTGAAAGTATCAATTTTCCT
21896377 ACACAAGAAC
Statistics
Matches: 210, Mismatches: 17, Indels: 17
0.86 0.07 0.07
Matches are distributed among these distances:
56 32 0.15
57 5 0.02
58 25 0.12
59 78 0.37
60 63 0.30
61 7 0.03
ACGTcount: A:0.46, C:0.08, G:0.12, T:0.34
Consensus pattern (59 bp):
TAAAAATAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:21896338 original size:119 final size:116
Alignment explanation
Indices: 21896081--21896376 Score: 416
Period size: 119 Copynumber: 2.5 Consensus size: 116
21896071 TTTCTTTAAA
*
21896081 TAAAAATCAAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCTTTAAA
1 TAAAAATCAAAATTT-CAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCTTAAA
*** *
21896146 AATAAATTTCAAAAAGGGTTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
65 AATAAATTTCAAAAAAAATTTTTGAGGAAAAGTTGAAAATATCAATTTTCCT
* *
21896198 TGAAAATCAAAATTTCCAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCTTAAAA
1 TAAAAATCAAAATTTCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCTTAAAA
*
21896263 ATAAATTTTCAAAAAAAATATTTTTAGGGAAAAGTTGAAAATATCAATTTTCCT
66 ATAAA-TTTCAAAAAAAAT-TTTTGA-GGAAAAGTTGAAAATATCAATTTTCCT
* ** *
21896317 TAAAAAT-AAATTTTCAAAAAAAAGGGTTTTT-GAAGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATCAAAATTTCAAAAAAAA-TATTTTTAG-GGAAAAGTTGAAAGTATCAATTTTCCT
21896377 ACACAAGAAC
Statistics
Matches: 160, Mismatches: 14, Indels: 8
0.88 0.08 0.04
Matches are distributed among these distances:
116 53 0.33
117 24 0.15
118 20 0.12
119 63 0.39
ACGTcount: A:0.46, C:0.08, G:0.12, T:0.34
Consensus pattern (116 bp):
TAAAAATCAAAATTTCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCTTAAAA
ATAAATTTCAAAAAAAATTTTTGAGGAAAAGTTGAAAATATCAATTTTCCT
Found at i:21898539 original size:10 final size:10
Alignment explanation
Indices: 21898524--21898571 Score: 55
Period size: 10 Copynumber: 4.8 Consensus size: 10
21898514 NNNNNNNNNN
21898524 ACAAAAAAAT
1 ACAAAAAAAT
21898534 ACAAAAAACA-
1 ACAAAAAA-AT
*
21898544 A-AAAAAAAC
1 ACAAAAAAAT
21898553 ACAAAAAAAAT
1 AC-AAAAAAAT
21898564 ACAAAAAA
1 ACAAAAAA
21898572 CAAAAAATGA
Statistics
Matches: 33, Mismatches: 1, Indels: 8
0.79 0.02 0.19
Matches are distributed among these distances:
8 1 0.03
9 7 0.21
10 15 0.45
11 10 0.30
ACGTcount: A:0.83, C:0.12, G:0.00, T:0.04
Consensus pattern (10 bp):
ACAAAAAAAT
Found at i:21898550 original size:11 final size:11
Alignment explanation
Indices: 21898536--21898576 Score: 55
Period size: 11 Copynumber: 3.5 Consensus size: 11
21898526 AAAAAAATAC
21898536 AAAAAACAAAA
1 AAAAAACAAAA
21898547 AAAAACACAAAA
1 AAAAA-ACAAAA
*
21898559 AAAATACAAAA
1 AAAAAACAAAA
21898570 AACAAAA
1 AA-AAAA
21898577 AATGACAATG
Statistics
Matches: 26, Mismatches: 2, Indels: 3
0.84 0.06 0.10
Matches are distributed among these distances:
11 13 0.50
12 13 0.50
ACGTcount: A:0.85, C:0.12, G:0.00, T:0.02
Consensus pattern (11 bp):
AAAAAACAAAA
Found at i:21898550 original size:19 final size:18
Alignment explanation
Indices: 21898526--21898578 Score: 63
Period size: 19 Copynumber: 2.8 Consensus size: 18
21898516 NNNNNNNNAC
21898526 AAAAAAATACAAAAAACAA-
1 AAAAAAA-ACAAAAAA-AAT
21898545 AAAAAAACACAAAAAAAAT
1 AAAAAAA-ACAAAAAAAAT
*
21898564 ACAAAAAACAAAAAA
1 AAAAAAAACAAAAAA
21898579 TGACAATGTT
Statistics
Matches: 31, Mismatches: 2, Indels: 3
0.86 0.06 0.08
Matches are distributed among these distances:
18 10 0.32
19 21 0.68
ACGTcount: A:0.85, C:0.11, G:0.00, T:0.04
Consensus pattern (18 bp):
AAAAAAAACAAAAAAAAT
Found at i:21898584 original size:17 final size:16
Alignment explanation
Indices: 21898527--21898584 Score: 68
Period size: 16 Copynumber: 3.7 Consensus size: 16
21898517 NNNNNNNACA
21898527 AAAAAATACAAAAAAC
1 AAAAAATACAAAAAAC
*
21898543 AAAAAA-A-AACACAA-
1 AAAAAATACAA-AAAAC
21898557 AAAAAATACAAAAAAC
1 AAAAAATACAAAAAAC
21898573 AAAAAATGACAA
1 AAAAAAT-ACAA
21898585 TGTTGAGTTG
Statistics
Matches: 35, Mismatches: 2, Indels: 9
0.76 0.04 0.20
Matches are distributed among these distances:
14 8 0.23
15 8 0.23
16 15 0.43
17 4 0.11
ACGTcount: A:0.81, C:0.12, G:0.02, T:0.05
Consensus pattern (16 bp):
AAAAAATACAAAAAAC
Found at i:21898828 original size:14 final size:14
Alignment explanation
Indices: 21898814--21898843 Score: 51
Period size: 14 Copynumber: 2.1 Consensus size: 14
21898804 TATATAGTTA
21898814 TATATTTATTATTAT
1 TATA-TTATTATTAT
21898829 TATATTATTATTAT
1 TATATTATTATTAT
21898843 T
1 T
21898844 TTTTTTGTAA
Statistics
Matches: 15, Mismatches: 0, Indels: 1
0.94 0.00 0.06
Matches are distributed among these distances:
14 11 0.73
15 4 0.27
ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67
Consensus pattern (14 bp):
TATATTATTATTAT
Found at i:21898934 original size:18 final size:18
Alignment explanation
Indices: 21898902--21898936 Score: 52
Period size: 18 Copynumber: 1.9 Consensus size: 18
21898892 TTTGTTAATT
*
21898902 TTATCTGATCCTTTTTTA
1 TTATCTGATCATTTTTTA
*
21898920 TTATCTGATTATTTTTT
1 TTATCTGATCATTTTTT
21898937 TTTCTTTTCC
Statistics
Matches: 15, Mismatches: 2, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
18 15 1.00
ACGTcount: A:0.17, C:0.11, G:0.06, T:0.66
Consensus pattern (18 bp):
TTATCTGATCATTTTTTA
Found at i:21899892 original size:18 final size:17
Alignment explanation
Indices: 21899871--21899931 Score: 54
Period size: 18 Copynumber: 3.5 Consensus size: 17
21899861 TTTATCTTAT
21899871 TTTTATTTTTTGTTTTAC
1 TTTTATTTTTT-TTTTAC
*
21899889 TTTTCTTTATTTTTTTA-
1 TTTTATTT-TTTTTTTAC
* *
21899906 TCTTTA-TTTATTTTCAC
1 T-TTTATTTTTTTTTTAC
21899923 TTTTATTTT
1 TTTTATTTT
21899932 GTTCTATTTT
Statistics
Matches: 35, Mismatches: 4, Indels: 9
0.73 0.08 0.19
Matches are distributed among these distances:
16 10 0.29
17 7 0.20
18 15 0.43
19 3 0.09
ACGTcount: A:0.13, C:0.08, G:0.02, T:0.77
Consensus pattern (17 bp):
TTTTATTTTTTTTTTAC
Found at i:21899939 original size:22 final size:22
Alignment explanation
Indices: 21899901--21899942 Score: 59
Period size: 22 Copynumber: 1.9 Consensus size: 22
21899891 TTCTTTATTT
21899901 TTTTATCTTTATTTATTTTCAC
1 TTTTATCTTTATTTATTTTCAC
*
21899923 TTTTAT-TTTGTTCTATTTTC
1 TTTTATCTTTATT-TATTTTC
21899943 TTTAAATAAA
Statistics
Matches: 18, Mismatches: 1, Indels: 2
0.86 0.05 0.10
Matches are distributed among these distances:
21 5 0.28
22 13 0.72
ACGTcount: A:0.14, C:0.12, G:0.02, T:0.71
Consensus pattern (22 bp):
TTTTATCTTTATTTATTTTCAC
Found at i:21900060 original size:59 final size:57
Alignment explanation
Indices: 21899956--21900345 Score: 400
Period size: 57 Copynumber: 6.6 Consensus size: 57
21899946 AAATAAAAAT
* * *
21899956 AAAAAAATATATTTTGGGGAAAAGTTGAAAGTATCAATTTCCTTAAAAATAAATTTTCA
1 AAAAAAACAT-TTTTGGGAAAAAGTTGAAAGTATCATTTTCCTTAAAAATAAA-TTTCA
* * *
21900015 AAACAAACATTTTTGGGAAAAACGCTGAAAGTATCATTTTTCTTAAAAATAAATTTTCCAAA
1 AAAAAAACATTTTTGGGAAAAA-GTTGAAAGTATCATTTTCCTTAAAAATAAA-TTT-C--A
*
21900077 AAAAAAACATTTTTGGGGAAAAGTTGAAAAGTAATCATTTTCCTTGAAACAATAAATTTC-
1 AAAAAAACATTTTTGGGAAAAAGTTG-AAAGT-ATCATTTTCCTT-AAA-AATAAATTTCA
* *
21900137 -AAAAAACATTTTTGGGAAACAGTTGAAAGTA-CGATTTTCCTTAAAAAATAAA-TTCC
1 AAAAAAACATTTTTGGGAAAAAGTTGAAAGTATC-ATTTTCCTT-AAAAATAAATTTCA
* *
21900193 CAAAAAATATTTTTGGGAAAAA-TTGAAAGTATCAATTTTTCCTT-AAAATAAATTTTCAAA
1 AAAAAAACATTTTTGGGAAAAAGTTGAAAGTATC-A-TTTTCCTTAAAAATAAA-TTTC--A
* * *
21900253 AAGAAAAAGGATTTTTGAG-AAAAGTTGAAAGTATCAATTTCCTTAAAAATAAATTTCA
1 AA-AAAAA-CATTTTTGGGAAAAAGTTGAAAGTATCATTTTCCTTAAAAATAAATTTCA
*
21900311 AAAAAAATATTTTTTGGG-AAAAGTTGAAAGTATCA
1 AAAAAAACA-TTTTTGGGAAAAAGTTGAAAGTATCA
21900346 ATTGTCCCTA
Statistics
Matches: 286, Mismatches: 23, Indels: 46
0.81 0.06 0.13
Matches are distributed among these distances:
55 3 0.01
56 25 0.09
57 63 0.22
58 30 0.10
59 62 0.22
60 13 0.05
61 21 0.07
62 45 0.16
63 12 0.04
64 6 0.02
65 6 0.02
ACGTcount: A:0.46, C:0.09, G:0.12, T:0.33
Consensus pattern (57 bp):
AAAAAAACATTTTTGGGAAAAAGTTGAAAGTATCATTTTCCTTAAAAATAAATTTCA
Found at i:21901782 original size:26 final size:26
Alignment explanation
Indices: 21901753--21901802 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
21901743 GATCTTAGAT
* *
21901753 TGGGAATGAACTCTGTATGCTTAAAC
1 TGGGAATGAACTCCGTATACTTAAAC
21901779 TGGGAATGAACTCCGTATACTTAA
1 TGGGAATGAACTCCGTATACTTAA
21901803 GTCAACCCAT
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.32, C:0.16, G:0.22, T:0.30
Consensus pattern (26 bp):
TGGGAATGAACTCCGTATACTTAAAC
Found at i:21902239 original size:26 final size:27
Alignment explanation
Indices: 21902184--21902239 Score: 71
Period size: 27 Copynumber: 2.1 Consensus size: 27
21902174 TTTTTCATGA
**
21902184 TTTTTAAAACTTTTTACGGTTCGAGAT
1 TTTTTAAAACTTTTTACGGAACGAGAT
*
21902211 TTTTTAAAACTTTTT-CGGAAGGAG-T
1 TTTTTAAAACTTTTTACGGAACGAGAT
21902236 TTTT
1 TTTT
21902240 GCCCCAAACT
Statistics
Matches: 26, Mismatches: 3, Indels: 2
0.84 0.10 0.06
Matches are distributed among these distances:
25 5 0.19
26 6 0.23
27 15 0.58
ACGTcount: A:0.25, C:0.09, G:0.16, T:0.50
Consensus pattern (27 bp):
TTTTTAAAACTTTTTACGGAACGAGAT
Found at i:21903593 original size:26 final size:26
Alignment explanation
Indices: 21903551--21903603 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
21903541 CCGGTTCGAT
21903551 CTTAGACTGGTAATGAACTCCATATG
1 CTTAGACTGGTAATGAACTCCATATG
* *
21903577 CTTAGACT-GTGAGTGAACTCCGTATG
1 CTTAGACTGGT-AATGAACTCCATATG
21903603 C
1 C
21903604 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 2 0.08
26 22 0.92
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGTAATGAACTCCATATG
Found at i:21903756 original size:899 final size:900
Alignment explanation
Indices: 21900830--21916877 Score: 18922
Period size: 899 Copynumber: 18.1 Consensus size: 900
21900820 CGTTATGACA
* **
21900830 CAACCCTCGATCCGGTCCGATCTTAGTTTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
21900895 TTCGTATGCCTAAGTCAACCCGCGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * ** * * *
21900960 GCGCAAGTCGGGGATCGATCGAGTCCCCCTTTGCATGCTACCGATCCTGCTGTCGCAACCTTCAG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* * ** *
21901025 TCCGATCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGA----GC
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * * * *
21901086 GGGCGGGTGGGTATTACGTCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * **
21901151 GGTGGGTTTAGGCACATCTTTATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * *
21901216 ACAATGGTCCCTTAAGCCTTCATGTGAAGCTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* *
21901281 ATTTTTTAAACTTTTTACGGTTCGAGAATTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
456 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * *
21901346 CTTGGTAGGCATGATCCTTGTATTTTTGTTGGCATGCATAAAAACATTCAACTAAAAACTCGAAG
521 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
*
21901411 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTCAGACACTTTAATTGCTACTGG
586 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGG
* * * *
21901476 CGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCCAGTTTTGATGAGGGA
650 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * * * * * * *
21901541 AAAGAGGCCAATATATGGG-CAAGTACCATCACCCATCGCAGATCATGTACGCACACCCCCCGAC
715 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CC
* * * ** * * *
21901605 C--CCCCCGATC-ACTGGAACCCTAATGTTGTCGATCAGGTTCTCCGGCGATGCTACGACGATGG
779 CGGCCCCCGATCGTC-GAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGG
* * * * * *
21901667 TGCCCCGACGAAGAAAAATACGGCACCAGCACCTACCCGAGCTCAGCATGTGCTATCG
843 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * * * *
21901725 CAATCCTCGATCCGGTCCGATCTTAGATTGGGAATGAACTCTGTATGCTTAAACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * *
21901790 TCCGTATACTTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAAGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * * *
21901855 GCGCAAGCCGAGGATCGATC-GATCCCCCTCTACATGTTGTCGATCCTGCTGTCGCAACACTCGG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* *
21901919 TCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAACGAGCGGGC
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-
* * * * * * *
21901984 GGACGGGCGGGCGGGTATTACGCCAGCCAGAGAGATGAGATGCGTAAGCCTTGGATCGATAGGGT
258 GG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* * * *
21902049 GGTAGGTGCGTTTAGGCACATCTTCATATTTCTACGTGTCAATGCCATTTTTATGGCTTGTAAAT
322 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
21902114 TCATACAATGGTCCCTTAAGCCATCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
387 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * *
21902179 CATGATTTTTAAAACTTTTTACGGTTCGAGATTTTTTAAAACTTTTTCGGAAGGAGTTTTTGCCC
452 CATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * *
21902244 CAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTA
517 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * * *
21902309 GAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAATGTCACCATTTCAGACACTTTAATGGCTAT
582 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
21902374 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
647 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * * *
21902439 GGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATATCCACACACCCCCC
712 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* ** * *
21902504 TCTCGGCACCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCTGGCG
777 -CCCGG--CCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACG
* * * *
21902569 ATGGTGCCACAACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCG
839 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * * * *
21902631 CAACCCTCGGTCCGGTTCGATCTTAGACTAGTAATGAACTCCATATGCTTAGACTGGGAGTGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
21902696 TTCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * ***
21902761 GCGTAAGCAGGGGATTGGTCGGGTCCCCCTCTGCGTGCTGTCGATCTTGCTATTGCAACCCTCGG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* * * * * * * *
21902826 TCTGGCCTAATTTTAGACTAGGAACGAACTCCGTATGCCTAAGCCAATCGATGAAACGAGTGGGC
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* ** *
21902891 GGTCGGATGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * **
21902956 GGTGGGTTTAGGCACATCTTCATATTCCTGCATGCCAAAGATATTTTTATGGCTTGTAAATTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* *
21903021 ACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATA
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * ** * *
21903086 ATTTTCGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAAAAGTTTTAGTCCCAAA
456 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * *
21903151 CTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGGACAAAAACATTCAACTAAAAACTCGAAG
521 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
21903216 TGTACAAGATTTTGTGGCCATTT-AAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGC
586 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
21903280 GGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGATTTCTCGAGGTTTGATGAGGGAT
651 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
21903345 A-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTCCC
716 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CCC
* * * * *
21903409 GGCCCCCGATCGTTGAAACCCCAGTGCCATCGGTCAGGTTCTCCGGTGATGCTCTGTCGATGGTG
780 GGCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTG
** ** *
21903474 CCATGACGAAGAAAAATGCAACACCAGCACATGCTCAAGCCCAGCATGTGCTGTCG
845 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * * * *
21903530 CAACCCTCGGTCCGGTTCGATCTTAGACTGGTAATGAACTCCATATGCTTAGACTGTGAGTGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* *
21903595 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCAGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * ** * ***
21903660 GCGCAAGCCAGGGATCGGCCGGGTCCCCCTCTGCGTGCTACCGATCCTACTATTGCAACCCTCGG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* * * * *
21903725 TCTGGTCTGATTTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAATCGATGAAACGAGTGGGC
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* *
21903790 GGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * ** * **
21903855 GGTGGGTTTAGGTACATCTTCATATTTTTGTGTGCCAAAGATATTTTTATGGCTTGTAAATTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * **
21903920 ACATTGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACA
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * **
21903985 ATTTTGGAAACTTTTTACGATTCGAGATTTTTTAAAATTTTTTCAGAAAAAGTTTTGGCCCCAAA
456 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * * *
21904050 CTTGGTAAAAGTGATCCTTGTATTTTTTTTGGCATGCAGAAAAACATTCAACTAAAAACTCGAAG
521 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* * * *
21904115 TGTACAAGATTTTGTGGCTATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTATTGGC
586 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
21904180 AGC-AACCTGTAAAAATTTCAAATGCTCTTTAAGGTGGTGTGACTTCTCGAGGTTTGATGAGGGA
651 AGCAAACCTGT-AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* **
21904244 TAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGCACACCACCCGGC
715 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCCC
* * * * * *
21904309 C--CCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTTTCCGGTGATGCTTCGGCGATAGT
779 CGGCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGT
* *
21904372 GTCCCGACGAAGAAAAATGCAGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
844 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * * ** * *
21904429 TAACCCTCGATTCGGTATGATCTCAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATTAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * **
21904494 TCCGTATGCCTAAATCAACCCACGAAACGAGCGTGCAGGCGTTCAGCCGATC-GAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * *
21904558 GCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCACAACCCTCGG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* * * * *
21904623 TCTGGTATGATCTTAGACTGGGAATGAACTCCGCATGCCTAAGCCAATCGACGAAACGAGTGGGT
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* *
21904688 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAACCGTGGATCGATAGGGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
**
21904753 GGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
*
21904818 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATG
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * *
21904883 ATTTTTGAAACTTTTTGCGGTTCTG-GATTTTTTAAAATTTTTTCGAAAGGATTTTTGGCCCCAA
456 ATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* * * * * * * *
21904947 ACATGGTAGACATGATACTTGTATTTTTTTTGGCTTGCACAAAAAAAGTCAACTAAAAACTTGAA
520 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
*
21905012 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGG
585 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
21905077 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGACTTCTCAAGGTTTGATGAGGGA
650 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
**
21905142 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCGACC
715 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCC
* * * * **
21905207 --CCCCCGATCGTC-AGAA-CCCAATGTCG-CGGATCACGTTCTCCGGCGATGCTTCGGTGATGG
780 GGCCCCCGATCGTCGA-AACCCCAATGCCGTCGG-TCAGGTTCTCCGGTGATGCTCCGACGATGG
* * * * * *
21905267 TG-CCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGAGGTGCCC
843 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* *
21905324 CAACACTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21905389 TCCGTATGCCTAAGTGAA-CCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAAGGGTGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* ** * * * ** *
21905453 GC-CTAAGCTGGGGATC-AACTGGGGCCCCCTCTGCGTGCTGTCGAACTTGCTATCGCAACCTTC
131 GCGC-AAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTC
* * * *
21905516 AGTCTGCTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAACGG
194 GGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A---
* * * * *
21905581 GCGGGCGGACGGGCAGGCACTACGTCAGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGG
255 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
* * *
21905646 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCCTGTAA
320 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
* * * *
21905711 ATT-ATGCAATGGTCCTTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTGTTT
385 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * * * *
21905775 TTCCATGATTTTCGAAACTATTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAGAAGTTTTGG
450 TT-CATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
*
21905840 CCCCAAGCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
514 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
21905905 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCATACACTTTAATGGC
579 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
21905970 TACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTTAT
644 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
21906035 GAGGGATAGGTGGCCAATATAAAGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACA--C
709 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* *** **
21906098 CCCCCCGGCCCCCCGATCGTCGAAACCCCAATGCCGTTGGTCAGGTTCTCCAACGATGCTCCGGT
774 CCCCCCGG-CCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGAC
* * *
21906163 GATGGTGCCTCGACGAAGAGAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCA
838 GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * *
21906226 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * *
21906291 TCTGTATGCCTAAGTTAACCCACAAAACGAGCGTGC-GGAGCTCAGCCGGCCAGAGGGGCGTGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * *** * ** * * ** *
21906355 GCGCAAGCCGGGTATAGGTCGGGTTTGCCTCTGTGTGCTACCGATCCTACTACTACAACCCTCAG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
21906420 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA------
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
*
21906479 --GCGGGCGGGCACAACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
*** *
21906542 GGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAACTTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * * *
21906607 ACAATGCTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGAAGACTCATTTTCTATTTTTCATC
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * * * *
21906672 ATTTTCGAAACTTTTTCCAGTTCGGGATTTTTTAAATTTTTTTCGGAAGGAGTTTTAGCCCCAAA
456 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* *
21906737 CTT-GTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTCAAAACTCGAAG
521 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
21906801 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGG
586 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
21906866 AGCAAACCTGTAAAATCTCAAATCCTCTTTAAGGGGGTGTGAGCTCTTGAGGTTTGATGAGGGAT
651 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * **
21906931 AGGGGGCCAATGTAAGGGCCAAATACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCGTC-
716 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCCG
* * *
21906994 -CCCCCGATC-ACCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTACC-A-GATGGT
781 GCCCCCGATCGTCGA-AACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCT-CCGACGATGGT
* *
21907055 GCCCCGACGAAGAAAAATGCGACA-CAGCA-ATGC-CGCAGCTCAGCATGT--TG-CTG
844 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCG-AGCCCAGCATGTGCTGTC-G
* * * **
21907108 C-ACCCTTGGT-TGTATCCGATCTTAGATACTTTGAAT--ACT-C-----CTTAGA-T----AT-
1 CAACCCTCGGTCCG-GTCCGATCTTAG--ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * *
21907157 -ACT-CGTATG-CTAA-TC-ACCAAC-AAACGAGCTTGCGGGCGCTC-CCCGGTCAGA-GGGCGA
63 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * ** * * *
21907214 GATGCGCAAGTCGAGGATCGGTCAGGT---CCTCTG-GTGCTACCGATCCGGCTTACC-C-ACTC
128 GATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGC-TGCCGCAACCC
** * * * * *
21907273 GGGGTCCT--TGTGA--ATAGACTAGGAATGAA-TTCGTATGCCTAAGCC-ACCGATGAAACGAG
192 TCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* * * *
21907332 CGGGGGAGCGGCGGGCGGGCACTACGCTGGCCAGGGAGAGACGGGATTGCGTAAGTCCCATTGGA
256 C--GGGCG-GGCGGGCGGGCACTACGCCGGCCA--GAGAGACGGGA-TGCGCAAG--CC-GTGGA
* * *
21907397 TCGATAGGGTGGTAGCTGCGTTTAAAGGCA-ATCTTCATCATTTTCTAACATGCCAAATGCCCA-
312 TCGATAGGGTGGTAGGTGGGTTT--AGGCACATCTTCAT-A-TTTCT-GCATGCC-AATG-CCAT
*
21907460 TTTTATGGGCTTGTAAGATTCATACAATGGTTCCCATAAGCCTTCACGGTGAAGTTTCAATGGCA
370 TTTTAT-GGCTTGTAA-ATTCATACAATGG-TCCCTTAAGCCTTCAC-GTGAAGTTTC-ATGGCA
*
21907525 A-ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-T
430 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATT
* * * *
21907588 TTTTCGAAAGGAGTTTTGGCCCCAAACGTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAT
495 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
*
21907653 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCA
560 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * * *
21907718 TTTTAGACACTTTAGTGGCTACTGACAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTG
625 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * * *
21907783 TGAGTTCTCCAGGTTTGATGAGGGGTAGGGGGCCAATATAATGGCTAAGTACTAGCACCCATCGC
690 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
21907848 ACATCTTATGCGTACA--CCCCCCCGGCAGCCCCGATCGTC-AGAACCTCC-ATGTCGTCGGTCA
755 ACATCATGTGCGCACACCCCCCCCCGGC--CCCCGATCGTCGA-AACC-CCAATGCCGTCGGTCA
* * * * *
21907909 GGTTCTCCGGCGATGCTCTTG-CGATGGTGCCCCGAAGGAGAAAAATGCGGCACCAGCACATGCC
816 GGTTCTCCGGTGATGCTC-CGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCT
* * * *
21907973 CTAGCCTAGCATGTGCTGCCA
880 CGAGCCCAGCATGTGCTGTCG
* *
21907994 CAACCCTCGGTACGGTCCGATCTTAGTCTGGGAATGAACTCCATATGCTTAGACTGGGAGTGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA---C---T-C-----C-------G---
* * * * *
21908059 TCCATATGCTTAGACTGGGAGTGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCATACAGG
44 ----TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * *
21908124 CGCTCAGCTGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGG-CTGGGTCCCCTTCTGCGTGC
105 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGC
* * * * *
21908188 TGCCGATCCTGCTACTGTAACCCTCGGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
169 TGTCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * * *
21908253 CTAAGCAAACTGACGAAATGAGCGAGCGGGCGGGCGGGCACTACGTCTGCCAGAGAGACGGGATG
234 CTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* *
21908318 CGCAAACCGTGGATCGATATGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCAT-CATGCCA
299 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC-TGCATGCCA
** * *
21908382 ATGAAATTTTTATGGCTTGTAAATTCATACTATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGG
363 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * *
21908447 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGCTTC-AGGATTTTCTAAA
428 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAA
* * *
21908511 ATTTTTTCGAAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATG
492 ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* * *
21908576 CACAAAAAAATTCAGCTAAAAACCCGAAGTGCACAAGATTTCGTGACCATTTGAAAAAAGTGTCC
557 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
21908641 CCATTTCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAAGGGG
622 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
21908706 GTGTGACTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
687 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
** ** * *
21908771 CGCACATCATGTGCGCACA-CCCCCCTTGGCCCCCTTGATCACCGGAACCCCAATGCCGCCGGTC
752 CGCACATCATGTGCGCACACCCCCCCCCGGCCCCC--GATCGTCGAAACCCCAATGCCGTCGGTC
* ** *
21908835 AGGTTCTCCGGTGATGCTTCGGTGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCT
815 AGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCT
* *
21908900 CGAGCCCAGCATGTGCTGCCA
880 CGAGCCCAGCATGTGCTGTCG
* * * * *
21908921 CAACCCTCGGTCTGATCCAATCTTAGACTGAGAATGAACTCCGTATGCATAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * * *
21908986 TCCGTATTCCTAAGTCTACCCATGAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGAGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * *** * * * * * * *
21909051 GTGTAAGCCGGGGATCAACCGGGTCCCCCCTCTACATGCTGTTGAACCTACTACCGCAACCCTCA
131 GCGCAAGCCGGGGATCGGTCGGGT-CCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
21909116 GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAACGGG
195 GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG-A---G
* * **
21909181 CGAGCGGGCGGGCGGGTAGGCGCTACGTTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
256 CGGGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
** *
21909246 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCCTG
317 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* * *
21909311 TAAATT-ATGCAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTGTA
382 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * *
21909375 TTTTTCATGATTTTTGAAACTATTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGAAGTTTT
447 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
*
21909440 GGCCCCAAGCTTGGTAGA-GATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
512 GGCCCCAAACTTGGTAGACG-TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
*
21909504 AAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
576 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * *
21909569 GGCTACTGGCAGCAAACCTGTAAAACCTCAAATGCTCTTTAAGGCGGTGTGAGTTCTCAAGGTTT
641 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * * * *
21909634 GATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCACCAACCGTAGCACATCATGTGCGCACA
706 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * *
21909699 -CCCCCCCAGGCCCCCCGATTGTCGGAACCCTAATG-C--C-GTC-GG-T-T-AGGT--T-CTCC
771 CCCCCCCCCGG-CCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCC
* * * * * * *
21909752 GACGA---TGCTCCGGCGAAGAAAAATGTGGCACCAGCAGAAGCTCGAGCCCAGCATGTCCTATC
835 GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTC
21909814 G
900 G
*
21909815 CAA--CAC--T-C-G---G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21909854 TCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAAGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
21909919 GTGCAAGCCGAGGATCGG-CTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGTAACCCTTG
131 GCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
* * *
21909983 GCCTGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGA
195 GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-
* *
21910048 CGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGG
256 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
*
21910113 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCATGCCAATGCCATTTTTATGGCTTGTAAA
321 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* * *
21910178 TTCATACTATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTT
386 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * *
21910243 TCATGATTTTTGAAACTTTTTGCGCTTC-AGGATTTTCTAAAATTTTTTCGAAAGGTGTTTTGGC
451 TCATGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
* *
21910307 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC--AAAAATTCAGCTACAAAC
515 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* * *
21910370 CCGAA-TGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGCT
580 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * * * *
21910434 ATTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTATGGGGGTGTTAGTTCTCGAGGTTTGATG
645 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* * *
21910499 AGGGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCG--CAGCCC
710 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * *
21910562 CCCACGCCCCCTCGATCGTCGAAACCCCAATGCCGCCGGTCAAGTTCTCCGGTGATGCTCCGACG
775 CCCCCGGCCCC-CGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACG
* ** * * * * * *
21910627 ATGGTGCCCTGGTGAAGAAAAATGCGACACCGGCACATGCCCAAGCCCAACATGTGCTGCCG
839 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * *
21910689 CAACCCTCGGTCCGATCCGGTCTTAGACTGGGAATGAACTCCTTATGCTTAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * ** *
21910754 TTCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGTTCAGGTGGCCAGAGGGGCTGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* ** * * * * * *
21910819 GCGGAAGCTAGGGTTCGATCGGGTGCCCCTCTGCGTGTTGTCGATCCTGCTGCTGCAACCCTCTG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* ** * * * *
21910884 TCTGATCCAATCATAGACTGGGAATGAACTACGTATGCCTAAGCTAATCGACGAAACGA----GC
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* *
21910945 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCATGGATCGATAGGGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
** *
21911010 GGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCCTGTAAATT-AT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * *
21911074 GCAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTGTATTTTTCATG
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * *
21911139 ATTTTTGAAACTATTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGAAGTTTTGGCCCCAAG
456 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
*
21911204 CTTGGTAGA-GATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAT
521 CTTGGTAGACG-TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
21911268 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
585 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* * *
21911333 CAGCAAACCTGTAAAACCTCAAATGCTCTTTAAGGCGGTGTGAGTTCTCAAGGTTTGATGAGGGA
650 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * * * *
21911398 TAGAGGGCCAATATAAGGGCCAAGTACCACCAACCGTCGCACATCATGTGCGCACA-CCCCCCCA
715 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCC
* * *
21911462 GGCCCCCCGATTGTCGAAACCCTAATG-C--C-GTC-GG-T-T-AGGT--T-CTCCGACGA---T
780 GG-CCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGT
* * * * **
21911513 GCTCCGACGAAGAAAAATGTGGCACCAGCAGAAGCTCGAGCCCAGCATGTGCTACCG
844 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
*
21911570 CAA--CAC--T-C-G---G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21911609 TCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAAGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * *
21911674 GTGCAAGCCGAGGATCGG-CTGGGTCCCCCTCTGCATGCTGCCGATCCTGCTGTCGTAACCCTTG
131 GCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
* * *
21911738 GCCTGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGA
195 GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-
* * *
21911803 CGGGCGGGCGGGCGGGCACTATGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGG
256 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
*
21911868 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCT--ATGCGCCAATGCCTTTTTTATGGCTTGTA
321 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT--GCCAATGCCATTTTTATGGCTTGTA
* * *
21911931 AGTTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC-CTATTTTCTAT
384 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-GTTTTCTAT
* * * * * *
21911995 TTTTCATGATTTTCGAAACTTTTTGCGGTTTCTA-A-TTTTTAAAAATTTTTCAGAA-TAGTTTT
448 TTTTCATGATTTTTGAAACTTTTTACGG-TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* * * *
21912057 GGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTCTTGCCAAGCACAAAAAAATTCAGCTAAA
512 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* * *
21912122 AACTCGAAGTGTATAAGATTTTGTGACCATTTAAAAAAAGTGTTCCCATTTCAGACACTTTAATG
577 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
21912187 GCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGA-GTTTG
642 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * *
21912251 ATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACCAGCACCCATCGCACATTATGTGTGCACA-
707 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
*
21912315 -CCCCCCCGGCCCCCCCGA-CTGTC-AGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCT
772 CCCCCCCCGG--CCCCCGATC-GTCGA-AACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCT
* * *
21912377 CCGACGATGGTGCCCCGGCGAAGAAAAATACGGCACCAGCATATGCTCGAGCCCAGCATGTGCTG
833 CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTG
21912442 -CTG
898 TC-G
* *
21912445 TAACCCT---T---G---G----T---CT-GG--T---CT--G-AT-CTTAGACTGAGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * * * *
21912484 TCCGTATGCCTAAGTCAACCCCCGAAACAAGCGTGTGGGCGCTCAGTCGGGCATAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
21912549 GCGCAAGCCAGGGATCGGACGGGTCCCCCTCTGCGTGCTGTTGATCCTACTGCCACAACCCTCGA
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
** * * * * *
21912614 TCCAGTCTGATCTTACACTGGGAATGAACTTCGTATGGCTAAGCCAACCGATGAAACGAGCGTGC
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * ** * *
21912679 GGGC--GC--TCACCACGCCGGCTTGAGAGACGGGATGCGCAAGCAGTGGATCGATAGTGTGGTA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * ** ***
21912740 TGTAGGTTTAGGCACAAGTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * *
21912805 ACAATGGTCCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACG
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
** *
21912870 ATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCACCAAA
456 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* *
21912935 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAACTCAGCTAAAAACTCGAAG
521 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
*
21913000 TGTACAAGATGTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGC
586 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * * *
21913064 GGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCAAGGTTTGATGAGGGAT
651 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * * **
21913129 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCATA-GCCCCCTAG
716 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCCG
* * * ** *
21913193 CCCCCCGATCGTCGGAACCCCAATGCCG-CCGTCAGGTTCTCTAGTGATGCTCCGGCGATGGTGC
781 GCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGC
* * *
21913257 CCC-AGGGAAGAAAAATGCGGCACCAGCACATGCCCCAGCCCAGCATGTGCTGTCG
846 CCCGA-CGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * *
21913312 CAACCCTTGGTCCGATCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATG-A-
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21913375 -----A---C----TCAACCCACGAAACGAGCGTACGTGTGCTCAACCGGCCAGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
21913428 GC-CTAAGCCGGGGATCGGTCGGGTCCTCTTCTACGTGCTATCAATCCTACTGCCGCAACCCTCG
131 GCGC-AAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCG
** ** * *
21913492 GTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGGACGAAACGAGCAGG
195 GTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* * * *
21913557 CGGGAGGGCGGGCACCACGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGATGGT
260 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
21913622 TGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTCTATGACTTGTAAATTCA
325 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * * *
21913687 TAAAATGCTCCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAT
390 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* **
21913752 GATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGAACCAA
455 GATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
*
21913817 ACTAT--TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGA
520 ACT-TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
*
21913880 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAATG
584 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
21913945 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTCTAGGTTCGATGAGGG
649 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* * * *
21914010 ATAGGGGGCCAATATAAGGGCCAAGTACTAGCAGCCATCACATATCATGTGCGCACACCCCCCGA
714 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC--
* * * * ** *
21914075 CCC-G--CCCGATCGGT-GGAACCTCAATGCCGCCGGTCAGGTTCTTCGACGCTGCTCCGACGAT
777 CCCGGCCCCCGATC-GTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGAT
* * * * * **
21914136 GGTGCCCTGGCAAAGAAAAATG-GGACACCAGCAAATGCCCGAGCCCAGCATGTGCTGTTA
841 GGTGCCCCGACGAAGAAAAATGCGG-CACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
*
21914196 CAA----C---CC--T-CGA---T---CT--G-AT---CT--G-AT-CTTAGACTTGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
21914235 TCCGTATGCCTAACTCAACCCACGAAACGAGCTTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * ** * *
21914300 GTGCAAGCCGGGGATCGGTTGGGTCTCCCTCTGTGTGCTGTCGATCCTGTTACCATAAGCCTCAG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
*
21914365 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGAC-AAA--A-----C
196 TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * * *
21914422 GAGCGGGCGGGCACTACGACGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGATA
261 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
21914487 GGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAGTGCCATTTTTATGGCTTGTAAATTCAT
326 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * *
21914552 ACAATGGTCCCTTAAGTCTTCATGTGAAGTTTCATTGCAAGACGACTGGTTTTCTATTTTTCATG
391 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
** * * * * *
21914617 ATTTTCAAAACATTTTGCGG-TCTGAGATTTGTTAAAATTTTTACGGAAGAAGTTTTGGCCCCAA
456 ATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* *
21914681 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCACCTAAAAACTCGAA
520 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * *
21914746 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACTAG
585 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* * *
21914811 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTGTGTTCTCGAGGTTTGGTGAGGGA
650 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
*
21914876 TAGGGGG-CAATCTAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA----CCCCC
715 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCC
* * * *
21914936 GACCCCCG--C--CGGAACCCCAATACCGCCGGTCAGGTTCTCC------G----G-CGATGGTG
780 GGCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTG
* * * * * * *
21914986 CCCCGACGATGAAAAATGCAGTAACAGCACATGCTCGAGCCTAGCAAGTGCTGCCG
845 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * * * ** *
21915042 TAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTACGAATGAGC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* ** ** * *
21915107 TCCGTATGCCTAAGTCGACCCACGAAACGAGCGTGCGGGTTCTCAGCCGGTTAAAGGGGCGGCAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * * *
21915172 GTGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGTGTGCTGTCAAACCTGTTGCCGTAACCCTCAG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
** ** * * *
21915237 T-TCAATCCAATCTTAGACCGAGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA----G
196 TCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* ** *
21915297 CGGGCGGGCGGGCACTATGCCAACCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGT
260 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG-
*
21915362 TA-GTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
324 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
21915426 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
389 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * *
21915491 TGATTTTTGAAACTTTTTATGGTTC-AGGATTTTTTAAAATTTTTT-GGACGGAGTTTTGGCTCC
454 TGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * * * *
21915554 AAACATGGTAGACATGATCCATGTATTTTTTTTGGCATGCACAAAAAAATTCACCTAAAAACTCG
518 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* *
21915619 AAGTGTGCAAGATTTTGTGGCCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
583 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
21915684 GGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCAAGGTTTGATGAGG
648 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * * * *
21915749 GATAGGGAGCCAATATAGGGGCCAAGTACCAGCACCCATCACACATCATTTGCGCACA--CCTCC
713 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC
* * * **
21915812 CCGGCTCCCCCGATCATCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGAT
778 CCGG--CCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGAT
21915877 GGTG-CCC--C---G----AT---G-A--AG-A-A------A----A--A-----TGT-G
841 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
* * * * * *
21915901 -AACCATCGGTCCAGTCCGATCTTAGATTGGGAATGAACTCCATTTGCTTAGACTAGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21915965 TCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGG-TGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* ** * * * * * *
21916029 GTGCAAGCTAGGGATCGGTCGGATCTCCCTCTACGTGCTATCGATCCTGCTGCCGGAACCCTCAG
131 GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
* * * * *
21916094 TGC-GCTCTAATCTTCGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA----G
196 T-CTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* * * * * * *
21916154 CGGGCGGGCAGGCACTACACCGGTCAGAGAGACGGGATGCGCAAGTCGTGGATCAATGGGGTGTT
260 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
21916219 AGGTGGATTTAGGCACCTCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCA
325 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
* *
21916284 TACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTGGTTTTCTATTTTTCAT
390 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
** * * * * * *
21916349 GATTTTCAAAACATTTTGCGGTCCGAGATTTGTTAAAATTTTTACGGAAGAAGTTTTGGCCCCAA
455 GATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* *
21916414 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCACCTAAAAACTCGAA
520 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * * * *
21916479 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTTTCCCCATTTCAAAAACTTTAATTGCTATTGG
585 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
21916544 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGA
650 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* *
21916609 TAGGGAGCCAATATAAGGGCCCAGTACCAGCACCCATCGCACATCATGTGCGCACA---CCCCCC
715 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCC
* * * *
21916671 GGCCCCCCTGATCGTCGGAACCCCAAT---GTC-GTCA-G-T-T-AGGT--T-CTCCGGCAATGG
780 GG-CCCCC-GATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGG
* **
21916725 TGCCCCGACGAAGAAAAATGCGGCACCAGTACATGC-CTGAGCCCAGCATGCACTGTCG
843 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCTC-GAGCCCAGCATGTGCTGTCG
* * * * *
21916783 CAACCCTCGATCCGATGCGATCTTATACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAAC
1 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
21916848 TCTGTATGCCTATGTCAACCGACAAAACGA
66 TCCGTATGCCTAAGTCAACCCACGAAACGA
21916878 ACGGACAGAC
Statistics
Matches: 13103, Mismatches: 1592, Indels: 928
0.84 0.10 0.06
Matches are distributed among these distances:
846 62 0.00
847 6 0.00
849 2 0.00
850 1 0.00
851 2 0.00
852 14 0.00
853 20 0.00
854 18 0.00
855 171 0.01
856 17 0.00
857 376 0.03
858 388 0.03
859 23 0.00
860 39 0.00
861 252 0.02
862 233 0.02
863 294 0.02
864 519 0.04
865 211 0.02
866 23 0.00
867 370 0.03
868 222 0.02
869 203 0.02
870 24 0.00
871 35 0.00
872 325 0.02
873 9 0.00
874 64 0.00
875 451 0.03
876 271 0.02
877 56 0.00
878 293 0.02
879 167 0.01
880 11 0.00
881 117 0.01
882 126 0.01
883 484 0.04
884 153 0.01
885 15 0.00
886 35 0.00
887 65 0.00
888 4 0.00
889 237 0.02
890 189 0.01
891 212 0.02
892 129 0.01
893 35 0.00
894 337 0.03
895 404 0.03
896 44 0.00
897 31 0.00
898 649 0.05
899 1302 0.10
900 283 0.02
901 352 0.03
902 807 0.06
903 334 0.03
904 5 0.00
905 2 0.00
906 240 0.02
907 91 0.01
908 18 0.00
909 356 0.03
910 112 0.01
915 1 0.00
919 6 0.00
920 2 0.00
921 1 0.00
924 10 0.00
925 71 0.01
926 274 0.02
927 151 0.01
928 14 0.00
929 12 0.00
930 11 0.00
931 21 0.00
932 15 0.00
933 34 0.00
934 24 0.00
935 2 0.00
936 8 0.00
937 21 0.00
938 17 0.00
939 4 0.00
940 21 0.00
941 17 0.00
942 14 0.00
943 12 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
GCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGG
TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCCG
GCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGC
CCCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCG
Found at i:21904483 original size:26 final size:26
Alignment explanation
Indices: 21904453--21904502 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
21904443 GTATGATCTC
21904453 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
*
21904479 AGACTGGGAATTAACTCCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
21904503 CTAAATCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:21905374 original size:26 final size:26
Alignment explanation
Indices: 21905345--21905397 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21905335 CCGGTCCAAT
21905345 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21905371 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21905397 C
1 C
21905398 CTAAGTGAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21908051 original size:26 final size:26
Alignment explanation
Indices: 21908015--21908093 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
21908005 ACGGTCCGAT
* *
21908015 CTTAGTCTGGGAATGAACTCCATATG
1 CTTAGACTGGGAGTGAACTCCATATG
21908041 CTTAGACTGGGAGTGAACTCCATATG
1 CTTAGACTGGGAGTGAACTCCATATG
21908067 CTTAGACTGGGAGTGAACTCCATATG
1 CTTAGACTGGGAGTGAACTCCATATG
21908093 C
1 C
21908094 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAGTGAACTCCATATG
Found at i:21910761 original size:26 final size:26
Alignment explanation
Indices: 21910710--21910762 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21910700 CCGATCCGGT
*
21910710 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21910736 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21910762 C
1 C
21910763 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21915102 original size:26 final size:26
Alignment explanation
Indices: 21915063--21915115 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21915053 CTGGTCTGAT
**
21915063 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTACGAATGAACTCCGTATG
*
21915089 CTTAGACTACGAATGAGCTCCGTATG
1 CTTAGACTACGAATGAACTCCGTATG
21915115 C
1 C
21915116 CTAAGTCGAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCGTATG
Found at i:21916833 original size:26 final size:26
Alignment explanation
Indices: 21916804--21916856 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21916794 CCGATGCGAT
*
21916804 CTTATACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
21916830 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21916856 C
1 C
21916857 CTATGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21918412 original size:26 final size:26
Alignment explanation
Indices: 21918376--21918428 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21918366 CCGGTCCTAT
*
21918376 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21918402 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21918428 C
1 C
21918429 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21919315 original size:26 final size:26
Alignment explanation
Indices: 21919286--21919336 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
21919276 CGGTCCTATC
21919286 TTAGACTGGGAATGAACTCCGTATGT
1 TTAGACTGGGAATGAACTCCGTATGT
21919312 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
21919337 CCTCAGTCAA
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGT
Found at i:21919544 original size:909 final size:903
Alignment explanation
Indices: 21916896--21919584 Score: 4450
Period size: 895 Copynumber: 3.0 Consensus size: 903
21916886 ACGGGCGGGC
* * *
21916896 AGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTCTAAATTCATACAATGGTC
1 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
21916961 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACAATTTTCAAA
66 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACAATTTTCAAA
*
21917026 ACTTTTTACGGTTTAGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACATGGTAGA
131 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACATGGTAGA
*
21917091 CGTGATCCTTTTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
196 CGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
21917156 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
261 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
*
21917221 ATAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCA
326 ATAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
21917286 ATATAAA-GCTCAAGTAGCAGCACCCATCGTACATCATGTCCGCACAACCCCCCGG-CCCCCCAA
391 ATATAAAGGC-CAAGTACCAGCACCCATCGTACATCATGTGCGCAC-ACCCCCCGGCCCCCCCGA
**
21917349 TCGCCGGAACCCCAATGCCGCCGGTCGGGTTCTCCGACGATGCTACGGCGATGGTACCCCGGTGA
454 TCGCCGGAACCCCAATGCCGCCGGTCGGGTTCTCCGA-GAT-CT-C-GCGATGGTACCCCGACGA
** * * *
21917414 AGAAAAATGCAGCACCAGCACATGGCCGAGCGTAGTATGTGCTGCCGTAACCCTCGGTCCGGT-C
515 AGAAAAATGCAGCACCAGCACATGGCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCC
* * *
21917478 TGTCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTTTGCCTAAGTCAA
580 TATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
*
21917543 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGAGGATCGA
645 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGA
* * *
21917608 CCGGGTCCCCCTCTATGTGCTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGAC
710 CCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGAC
* *
21917673 TTGGAATGAACTTCATATGCCTAAGCCAACCGACGAAACGAGCATGCGAGCGGGCGGGCGGGCGG
775 TTGGAATGAACTTCATATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCGGGCGGGCGGGCAG
* **
21917738 GTACTACGTCGGCCAGAGAGACGGGATGCATAAGCCATGGATCGATAGGGTGGTAGGTGGCTTT
840 GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGCTTT
*
21917802 AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
1 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
*
21917867 CCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACAATTTTCAAA
66 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACAATTTTCAAA
* *
21917932 ACTTTTTACGGTTCAGGATTTTTTAAAAGTTTTTCGAAAGGTGTTTTGGCCCCAAACAT-GTAGA
131 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACATGGTAGA
*
21917996 CGTGATCCTTGTATTTTTTTTGGCAAGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
196 CGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
* * * *
21918061 TTTTGTGACCACTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAAGTCTACTGGCAGCAAACCT
261 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
21918126 ATAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
326 ATAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * * *
21918191 ATATAAAGGCCAAGTACTAGCACCCATCGTACATCATGTGCGCACACCCCCCGACCTCTCTGATC
391 ATATAAAGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCGGCCCCCCCGATC
* *
21918256 GCCGGAACCCCAATGTCACCGGTCGGGTTCTCC--GA--T---GATGGTACCCCGACGAAGAAAA
456 GCCGGAACCCCAATGCCGCCGGTCGGGTTCTCCGAGATCTCGCGATGGTACCCCGACGAAGAAAA
*
21918314 ATGCAGCACCAACACATGGCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCCTATCTT
521 ATGCAGCACCAGCACATGGCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCCTATCTT
* *
21918379 AGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACA
586 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * *
21918444 AAACGAGCGTGTGGGCGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGT
651 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGT
* * * *
21918509 CCCCCTCTACGTGCTACCGATCCTGCTGCCGTAACCCTCGATCTAGTATGATCTTAGACTTGGAA
716 CCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTTGGAA
* * *
21918574 TGAACTTCATATGCCTAAGCCAACCGATGAAACGAGCATGCGGGCGGGTGGACGGGCAGGCACTA
781 TGAACTTCATATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCGGGCGGGCGGGCAGGCACTA
* *
21918639 CG-CTGGCTAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTT
846 CGTC-GGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGCTTT
* *
21918697 AGGCACATGTTCATACTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
1 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
21918762 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTCTCTACTTTTCACAATTTTCAAA
66 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACAATTTTCAAA
21918827 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACATGGTAGA
131 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACATGGTAGA
21918892 CGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
196 CGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
21918957 -TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
261 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
21919021 ATAAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
326 AT-AAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
21919086 AATATAAAGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCGCCCCCGGCCCCCCCG
390 AATATAAAGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACA-C-CCCCCGGCCCCCCCG
* * *
21919151 ATCACCGGAACCCCAATGCCGTCGGTCGGGTTCTCCGATGATTCTCCGACGATGGTACCCCGACA
453 ATCGCCGGAACCCCAATGCCGCCGGTCGGGTTCTCCGA-GA-TCT-CG-CGATGGTACCCCGACG
*
21919216 AAGAAAAATGCAGCACCAGCACATGGCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTC
514 AAGAAAAATGCAGCACCAGCACATGGCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTC
* *
21919281 CTATCTTAGACTGGGAATGAACTCCGTATGTTTAGACTGGGAATGAACTCCGTATGCCTCAGTCA
579 CTATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* *
21919346 ACCCACGAAACTAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCG
644 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCG
*
21919411 ACCGGGTCCCCCTCTACGTGTTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGA
709 ACCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGA
* * * * *
21919476 CTTGGAATGAACTTCATATGCCTAAGCCAACCGACAAAATGGGCATGCGGGCGGACGGGCGAGCA
774 CTTGGAATGAACTTCATATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCGGGCGGGCGGGCA
* *
21919541 GGCACTACGTCGGCCAGAGAGACGGAATGCGCAAGCCGTGGATC
839 GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATC
21919585 AATGGCAGCA
Statistics
Matches: 1654, Mismatches: 109, Indels: 37
0.92 0.06 0.02
Matches are distributed among these distances:
894 72 0.04
895 540 0.33
896 177 0.11
897 1 0.00
898 43 0.03
899 1 0.00
901 2 0.00
902 2 0.00
904 9 0.01
905 269 0.16
906 183 0.11
909 354 0.21
910 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (903 bp):
AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTCTCTATTTTTCACAATTTTCAAA
ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACATGGTAGA
CGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAGTTTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
ATAAAATCTCAAATGCGCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAAGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCGGCCCCCCCGATC
GCCGGAACCCCAATGCCGCCGGTCGGGTTCTCCGAGATCTCGCGATGGTACCCCGACGAAGAAAA
ATGCAGCACCAGCACATGGCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCCTATCTT
AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGT
CCCCCTCTACGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTTGGAA
TGAACTTCATATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCGGGCGGGCGGGCAGGCACTA
CGTCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGCTTT
Found at i:21919887 original size:26 final size:26
Alignment explanation
Indices: 21919858--21919913 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
21919848 CCGATCTGAT
21919858 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21919884 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21919910 CTTA
1 CTTA
21919914 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21920758 original size:26 final size:27
Alignment explanation
Indices: 21920729--21920783 Score: 103
Period size: 26 Copynumber: 2.1 Consensus size: 27
21920719 GTCCGATCTT
21920729 AGACTGGGAATGAACTCCGTATG-CTA
1 AGACTGGGAATGAACTCCGTATGCCTA
21920755 AGACTGGGAATGAACTCCGTATGCCTA
1 AGACTGGGAATGAACTCCGTATGCCTA
21920782 AG
1 AG
21920784 TCAACCCATG
Statistics
Matches: 28, Mismatches: 0, Indels: 1
0.97 0.00 0.03
Matches are distributed among these distances:
26 23 0.82
27 5 0.18
ACGTcount: A:0.31, C:0.20, G:0.27, T:0.22
Consensus pattern (27 bp):
AGACTGGGAATGAACTCCGTATGCCTA
Found at i:21921660 original size:26 final size:26
Alignment explanation
Indices: 21921624--21921676 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21921614 CCGGTGCGAT
*
21921624 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATCAACTCCATATG
*
21921650 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCATATG
21921676 C
1 C
21921677 CTAAGCTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCATATG
Found at i:21922423 original size:900 final size:896
Alignment explanation
Indices: 21920432--21922623 Score: 3023
Period size: 898 Copynumber: 2.4 Consensus size: 896
21920422 GTACAAACCA
* *
21920432 TTCAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGT
1 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGT
* * *
21920497 GAATTCTCGATGTTTGATGAGGGATAGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
66 GAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
21920562 ATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCT-GGTCAGGTTCT
131 ATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC-CTCGGTCAGGTTCT
* * * * ** *
21920626 CCGGCGATGCTCTGGCGATGGTGCCCCGGTAAAGAAAAATGTGCCACCAGCACATGCCCGAGCCC
195 CCAGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGACACCAGCACATGCCCGAGCCC
** * * *
21920691 AGCATGTGCTGTCGCAATACTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTAA
260 AGCATGTGCTACCGCAA-CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * *
21920756 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGACCGTGCGGGTGTTCAACGGCC
324 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGTGCTCAACCGCC
* * * * * * * * *
21920821 AGAGGGGCCGGATGCGCAAGCTGGGGATTGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTA
389 AAAGGGGCAGGATACGCAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCGGTCGATCCTACTA
* * * **
21920886 CCACAACCCTCAGTCCGACCCGATCTTAGATGGGAATGAATTTCGTAAGCCTAAGCCAACCGATG
454 CCACAACCCTCAGTCCGACCCAATCTTAGATGGGAATGAACTCCGTAAGCCTAAGCCAACCGACA
* *
21920951 AAACGAGCAGGCGGGCGGGCGGACACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
519 AAACAAGCAGGCGGGCGGGCGGACACTACGTCGGCCAGAAAGACGGGATGCGCAAGCCGTGGATC
*
21921016 GATAGGGTGGTAGGTAGGTTTAGGCACGTCTTCACATTTCTCCATGCCAATGCCATTTTTATGGC
584 GATAGGGTGGTAGGTAGGTTTAGGCACATCTTCACATTTCTCCATGCCAATGCCATTTTTATGGC
*
21921081 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCGTTTT
649 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACCCGTTTT
* * * * * * * * *
21921146 CTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTTAAAATTTTTTTGGAAGGTG
714 CAATTTTTCACGATTTTTAAAACTTTTTACAGTTCAGGATTTTTTAAAAATTTTTTCGAAAGGAG
* * * **
21921211 TTTTGGCTCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAAC
779 TTTTGGCTCAAAACTTGGGAGACATGATCCTTATATTTTTGGTGGCATGCACAAAAAAATTCAAC
*
21921276 AAAAAACTCGAAGTGTATAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCAT
844 AAAAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCAT
* * *
21921329 TTCAGACACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGC
1 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGT
* * *
21921394 AAGTTCTCGAGGTTTGATGAGGGAAAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCGCA
66 GAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * *
21921459 CATTATGTGCGCACACGCCCCCGGCCCCCCGATCGCCGGAACCCTAATGCCGTCGGTCAGGTTCT
130 CATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCCTCGGTCAGGTTCT
* * * * *
21921524 CCAGTGATCCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGTGCCT
195 CCAGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGACACCAGCACATGCCCGAGCCC
* *
21921589 AGCATGTGCTACCGCAACCTTCGGTCCGGTGCGATCTTAGACTGGGAATGAACTCCATATGCTTA
260 AGCATGTGCTACCGCAACC-TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* ** *
21921654 GACTGGGAATCAACTCCGTATGCCTAAG-CTAACCCACAAAACGAGCGTACGGGTGCTCAGCCGC
324 GACTGGGAATGAACTCCGTATGCCTAAGTC-AACCCATGAAACGAGCGTACGGGTGCTCAACCGC
* * * *
21921718 CAAAGGGGTAGGATACGTAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCGGTCGATCTTGCT
388 CAAAGGGGCAGGATACGCAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCGGTCGATCCTACT
* * ** ** * *
21921783 GCCGCAACCCTC-GATTGGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCATCCG
453 ACCACAACCCTCAG-TCCGACCCAATCTTAGA-TGGGAATGAACTCCGTAAGCCTAAGCCAACCG
* * *
21921847 ACAAAATAAGCGACCGGACGGGCGGGCGGGCACTACGTCGGCCAGAAAGATGGGATGCGCAAGCC
516 ACAAAACAAGC-A--GG-CGGGCGGGCGGACACTACGTCGGCCAGAAAGACGGGATGCGCAAGCC
* * * *
21921912 GTGGATCGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCATGCCAATGCCATTT
577 GTGGATCGATAGGGTGGTAGGTAGGTTTAGGCACATCTTCACATTTCTCCATGCCAATGCCATTT
*
21921977 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAAGACAAC
642 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAAC
*
21922042 TCG-TTTCAATTTTTCACGATTTTTAAAACTTTTTACAGTTCAGGA-TTTTTAAAAATTTTTTCG
707 CCGTTTTCAATTTTTCACGATTTTTAAAACTTTTTACAGTTCAGGATTTTTTAAAAATTTTTTCG
**
21922105 AAAGGAGTTTTGGC-CAAAACTTGGGAGATGTGATCCTTATATTTTTGGTGGCATGCACAAAAAA
772 AAAGGAGTTTTGGCTCAAAACTTGGGAGACATGATCCTTATATTTTTGGTGGCATGCACAAAAAA
* *
21922169 ATTCAACTAAAAACTTGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCAT
837 ATTCAACAAAAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCAT
** * * *
21922229 TTGTGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT-TGAAAAGCTCTTTAAGCGGGTGT
1 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGT
*
21922293 GAGTTCTCGAGGTTTGATGCGGGATATGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
66 GAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* ** *
21922358 CATCATGTGCACACACCCCCCCACCCCCCTCGATCGTCGGAACCCCAATGCCCTCGATCAGGTTC
130 CATCATGTGCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCCTCGGTCAGGTTC
* *
21922423 TCCGATAATGCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAA-AAAAGTGTGACTCCAGCA
194 TCC----A-G-T-----GATGCTCCGACGATGGTGCCCCGAC-AAAGAAAAATGTGACACCAGCA
* *
21922487 CATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGATCCGGCCCGATCTTAGACTGGGAATGAA
247 CATGCCCGAGCCCAGCATGTGCTACCGCAA-CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* * *
21922552 CTCTGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTTCGG
311 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGG
*
21922617 GCGCTCA
376 GTGCTCA
21922624 TCCGGTCGGA
Statistics
Matches: 1130, Mismatches: 140, Indels: 36
0.87 0.11 0.03
Matches are distributed among these distances:
897 86 0.08
898 332 0.29
899 138 0.12
900 172 0.15
901 28 0.02
902 39 0.03
903 169 0.15
904 1 0.00
905 1 0.00
906 1 0.00
911 157 0.14
912 6 0.01
ACGTcount: A:0.26, C:0.25, G:0.25, T:0.24
Consensus pattern (896 bp):
TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGT
GAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
ATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCCTCGGTCAGGTTCTC
CAGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGACACCAGCACATGCCCGAGCCCA
GCATGTGCTACCGCAACCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
CTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGTGCTCAACCGCCAA
AGGGGCAGGATACGCAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCGGTCGATCCTACTACC
ACAACCCTCAGTCCGACCCAATCTTAGATGGGAATGAACTCCGTAAGCCTAAGCCAACCGACAAA
ACAAGCAGGCGGGCGGGCGGACACTACGTCGGCCAGAAAGACGGGATGCGCAAGCCGTGGATCGA
TAGGGTGGTAGGTAGGTTTAGGCACATCTTCACATTTCTCCATGCCAATGCCATTTTTATGGCTT
GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACCCGTTTTCA
ATTTTTCACGATTTTTAAAACTTTTTACAGTTCAGGATTTTTTAAAAATTTTTTCGAAAGGAGTT
TTGGCTCAAAACTTGGGAGACATGATCCTTATATTTTTGGTGGCATGCACAAAAAAATTCAACAA
AAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCAT
Found at i:21922451 original size:11 final size:11
Alignment explanation
Indices: 21922430--21922454 Score: 50
Period size: 11 Copynumber: 2.3 Consensus size: 11
21922420 TTCTCCGATA
21922430 ATGCTCCGACG
1 ATGCTCCGACG
21922441 ATGCTCCGACG
1 ATGCTCCGACG
21922452 ATG
1 ATG
21922455 GTGCCCCGAC
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 14 1.00
ACGTcount: A:0.20, C:0.32, G:0.28, T:0.20
Consensus pattern (11 bp):
ATGCTCCGACG
Found at i:21922571 original size:26 final size:26
Alignment explanation
Indices: 21922535--21922587 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21922525 CCGGCCCGAT
21922535 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
21922561 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
21922587 C
1 C
21922588 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:21924137 original size:286 final size:286
Alignment explanation
Indices: 21923571--21924133 Score: 880
Period size: 286 Copynumber: 2.0 Consensus size: 286
21923561 GTGGGCGGGC
* *
21923571 ACTACACCGGTCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGG
1 ACTACACCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGG
**
21923636 CACATCTTCATATTTCTGGGTGCCAATGCCATTTTTATGGCTTGTAAATTCAAGCAATGGTCCCT
66 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAAGCAATGGTCCCT
*
21923701 TAAGCCTTCACGTGAAGTTTCATAGCAAGATGACTCGTTCTCTATTTTTCAAAATTTTTGAAACT
131 TAAGCCTTCACGTGAAGTTTCATAGCAAGACGACTCGTTCTCTATTTTTCAAAATTTTTGAAACT
* * * *
21923766 TTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGTAGGAGTTTTGGCCCCAAACTTGGTAGATAT
196 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACAT
21923831 GATCCTTGTAGTTTTTTTGGCCCCAA
261 GATCCTTGTAGTTTTTTTGGCCCCAA
* * * * *
21923857 ACTACGCCGGCCAGAGAGACAGGATGTGCAAGTCGTGGATCGATAGGGTGGTGGGTGGGTTTAGG
1 ACTACACCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGG
*
21923922 GACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA-CAATGGTCCC
66 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA-AGCAATGGTCCC
* * **
21923986 TTAAGCCTTCACGTGAAGTTTCA-AGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAA
130 TTAAGCCTTCACGTGAAGTTTCATA-GCAAGACGACTCGTTCTCTATTTTTCAAAATTTTTGAAA
* *
21924050 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAATGA-TTTTGGCCCCAAACTTGGTAGAC
194 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
21924114 GTGATCCTTGTATTTTTTTT
259 ATGATCCTTGTAGTTTTTTT
21924134 TGGCATGCAA
Statistics
Matches: 252, Mismatches: 23, Indels: 5
0.90 0.08 0.02
Matches are distributed among these distances:
285 41 0.16
286 210 0.83
287 1 0.00
ACGTcount: A:0.23, C:0.18, G:0.23, T:0.36
Consensus pattern (286 bp):
ACTACACCGGCCAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGG
CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAAGCAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATAGCAAGACGACTCGTTCTCTATTTTTCAAAATTTTTGAAACT
TTTTACGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACAT
GATCCTTGTAGTTTTTTTGGCCCCAA
Found at i:21927371 original size:26 final size:26
Alignment explanation
Indices: 21927342--21927394 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21927332 CCGGTCCGAT
*
21927342 CTTAGTCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21927368 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21927394 C
1 C
21927395 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21928268 original size:26 final size:26
Alignment explanation
Indices: 21928239--21928290 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
21928229 CCGATCCGAT
*
21928239 TTTAGACTGGGAAAGAACTCCGTATG
1 TTTAGACCGGGAAAGAACTCCGTATG
*
21928265 TTTAGACCGGGAATGAACTCCGTATG
1 TTTAGACCGGGAAAGAACTCCGTATG
21928291 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.27, T:0.27
Consensus pattern (26 bp):
TTTAGACCGGGAAAGAACTCCGTATG
Found at i:21931835 original size:26 final size:26
Alignment explanation
Indices: 21931797--21931849 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21931787 CGAGTCCAAT
21931797 CTTAGACAAGGAATGAACTCCGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
** *
21931823 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACAAGGAATGAACTCCGTATG
21931849 C
1 C
21931850 GTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACAAGGAATGAACTCCGTATG
Found at i:21932738 original size:26 final size:26
Alignment explanation
Indices: 21932700--21932752 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21932690 CTGATCCGAT
* *
21932700 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21932726 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21932752 C
1 C
21932753 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21933646 original size:26 final size:26
Alignment explanation
Indices: 21933610--21933659 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
21933600 GTCTGTTCTC
21933610 AGACTGGGAATGAACTCCATATGCTT
1 AGACTGGGAATGAACTCCATATGCTT
*
21933636 AGACTGGGAATGAACTCCGTATGC
1 AGACTGGGAATGAACTCCATATGC
21933660 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.26, T:0.24
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCATATGCTT
Found at i:21936306 original size:26 final size:26
Alignment explanation
Indices: 21936277--21936329 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21936267 CTTGTCCGAT
21936277 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21936303 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21936329 C
1 C
21936330 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21937198 original size:26 final size:26
Alignment explanation
Indices: 21937168--21937219 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
21937158 TAGTCTGATA
21937168 TTAGACTAGGAATGAACTCCATATGC
1 TTAGACTAGGAATGAACTCCATATGC
* *
21937194 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTAGGAATGAACTCCATATGC
21937220 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.19, G:0.23, T:0.27
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCATATGC
Found at i:21937720 original size:895 final size:896
Alignment explanation
Indices: 21926178--21947007 Score: 25719
Period size: 903 Copynumber: 23.4 Consensus size: 896
21926168 CAGGTTCTAG
*
21926178 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GAGG-GTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * * *
21926241 TCGATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTATGTACCAGCACCCATCACAGATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * ** *
21926306 GTGCGCGCACCCCCCCGACCCCCCGATCGCCAGAACCTTAATGCCGCCGGTCAGGTTCTCCGACG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * *
21926371 ATGCTCC-AGCGATGGTGCACCGACGAAGAAAAATGGGGCACCAGCACATGCCTGAACCCAGCAT
196 ATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* *
21926435 GTGCTGCAGCAACCCT---T--G---G---TT---C---G---G---TCCG-AT-CTTAGACTAG
260 GTGCTGCCGCAACCCTCGGTCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
21926475 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCCGACCAAAGG
325 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG-CCAGAGG
* * ** * * * * * * * * *
21926540 GACGGGATGCACAATTCAGGGATCGATCAGGTCCCCATTTGCGTGCTACTGATCCTGCTATCGTA
389 GGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGCA
* * *
21926605 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAAC
454 ACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
** * * * *
21926670 GAGTTGGCGGGCGGACAGGCAGGCACTACACCGGCCAGAGAGACGGAATGCACAAGCCGTGGATC
518 GAGCGGGCGGGC-G--A-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
**
21926735 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT--ATGTGGAATTGCCATTTTTATG
579 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG-CCAA-TGCCATTTTTATG
* *
21926798 GCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACGTGAAG-TTCTATGGCAAGACGACTCAT
642 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC-ATGGCAAGACGACTCGT
* * * * *
21926862 TTTTTATTTTTAATGATTTTTGAAACTTTTTGCGGTTC-ATAATTTTTTAAAATTTTTTCAGAAG
706 TTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAG
* * * * *
21926926 TAGTTTTGACACCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
770 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
21926991 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAGAAGTGTCCCCATTTCAGA
835 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21927053 CACTTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
21927118 TCGAGGTTTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
** * * * * *
21927183 GTGCGCACACCCCCTAGCCCCCCCGATCGTCGAAACCCTAATGCCGCCAGTCAGGTTCTCCGACG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
*
21927248 ATGCTCCGACAATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
21927313 TGCTACCGCAACCCTCGGTCCGGTCCGATCTTAGTCTGGGAATGAACTCCGTATGCTTAGACTGG
261 TGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * * * *
21927378 GAATGAACTCTGTATGCCTAAGCCAACCCATGAAATGAGCCTGCCGGCGCTCAGTCGGCCAGAGG
325 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGCCAGAGG
* * * * * *
21927443 GGCGGGTTGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGCCGATCCTGTTGTTGTA
389 GGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGCA
* * *
21927508 ACCCTCGATCTGATCCAATGTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
454 ACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * * *
21927573 GAGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGATACGCGAGCCATGGATCGATA
518 GAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* *
21927638 GGATGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGT
583 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT
* **
21927703 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAATACGACTTATTTT-TAT
648 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * * * * *
21927767 TTTTCACGA-TTTTGAAACTTTCTACGGTTTGGGATTTTTTCAAATTTTTTTGGAAGGAGTTTTA
713 TTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG
* ** *
21927831 CCCCCAAACTTATTAGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTCAGCGAAAA
778 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
21927895 ACTCGGAGTGTACAAGATTTTGTGACTATTTGTAAAAAA-TGTCCCCATTTCAGA
843 ACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGA
* *
21927949 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
21928014 TTGAGGTTTTATGAGGGATAGGGAGCCAATATAATGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
21928079 GCGCGCACACCCCCCTGGCCCCCCCGATTGTCGGAACCACAATGCCGACGGTCAGGTTCTCCGGT
131 GTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * *
21928144 GATGCTCC-AGTGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCA
195 GATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * * * *
21928208 TGTGTTGTCGCAACCCTCGATCCGATCCGATTTTAGACTGGGAAAGAACTCCGTATGTTTAGACC
259 TGTGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * *
21928273 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCACTCAGCTGGCCAAA
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC-CGCCAGA
* * * * *
21928338 GGGGCGGGATGCGCAAGTCGGGGATCGGCTGGGTCCCCCACTGCGTGCTGCCGATCCTGCTGCCG
387 GGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCG
* * *
21928403 CAACCC-CGAT-TCGGTCCTATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACAA
452 CAACCCTCGGTCT-GGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * *
21928466 AATGAGCGGGCGGGCAGGCAGGCGGGCACTATGCTGGCCAAAGAGACGGGATGCGCAAGTCGTGG
515 AACGAGCGGGCGGGC--G-A-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * *
21928531 ATCGATAGGATGGTAGGTGGGTTAAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAC
576 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* *
21928596 GGCTTGTAAATTCATACAATGGTCCCTTGAGCCCTCACGTGAAGTTTCA---CAAGACGACTCGT
641 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * *
21928658 TTTCTATTTTTCAAGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCTGAAAG
706 TTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGG
*
21928723 AGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
771 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* ** *
21928788 GCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTGCATTTCATA
836 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21928849 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAGGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
21928914 TTGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTATCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * ** * *
21928978 GTGTGCACTCCCCCCCCGGCCCTCCCGATCGTTGGAACCCCAAAGCAGCCGGTCAGGTTCTCCGG
131 GTGCGCA--CACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * ** * *
21929043 TGATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATGCAGCACCAGCACATGCCTGAGCCCAGCA
194 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * *
21929108 AGTGCTGCCGCAACCCTCGGTCCAGTCCAATCTTTGACTAGGAATGAACTCCGTATGCTTAGACT
259 TGTGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* ** * * *
21929173 GGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATAACCGTACGGGTGCTCAGCCGGCCAGA
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAGA
* * * * * * * * *
21929238 GGGTCGGGATGCACAAGCTGAGTATCGATCGGGTCCCCTTCTGCGTGCTGCCGATCCTACTGCCG
387 GGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCG
*
21929303 CAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAAGCCAACCGACGAA
452 CAACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
21929368 ACGAGCGGGCGGACGGGCTAGCGGGCACTACGCCGGCCAGAGAGACAGGATACACAAGCCGTGGA
516 ACGAGC--G-GG-CGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
21929433 TCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATG
577 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* * *
21929498 GCCTGTAAATTCATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTT
642 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
21929563 TTCTATTTTTCATGATTTTTGAACCCTTTTGCGGTTCAAGAATTTTTTAAAATTTTTTCGGAAGG
707 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAG-ATTTTTTAAAATTTTTTCGGAAGG
21929628 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAAATTC
771 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AAATTC
21929693 AGCCT-AAAACT-GAAGTGGTACAAGATTTTGTGACCATTTGAAAAAAGGTGTCCCCATTTCAGA
835 AG-CTAAAAACTCGAAGT-GTACAAGATTTTGTGACCATTTGAAAAAA-GTGTCCCCATTTCAGA
*
21929756 CACTTTAATAGCTACTGGCAGCAAACCTGT-AAATCTCCAAAT-CTCTTTAAGGGGGTGTGAGTT
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT-CAAATGCTCTTTAAGGGGGTGTGAGTT
*
21929819 CTCAAGGTTTG-TGA-GGATA-GGGGCCAATATAAGGGCCAAAGTACC-G-----A--G--CATC
65 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC-AAGTACCAGCACCCATCGCACATC
* * * *
21929871 ATGTGCGCACACCCCCCCGACCCCCCAGAATCGTCGGGAACCCCAATG-CGCCAGTCAGGTTCT-
129 ATGTGCGCACA-CCCCCCGGCCCCCCCG-ATCG-CCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * *
21929934 ------T-C-ACG--GATGGTGCCCCGATGAAGAAACATGCGGCACCAGCACATGCCCGAGCCTA
191 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * * * *
21929989 GCATGCGCTACCGTAACCCTCAGTCTGGTCCGATCTTCGACTGGGAATGAACTCTGTATGCTTAG
256 GCATGTGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
** * * *
21930054 ACTACGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACTAGCGTGCGGGCACTCAGCCGGCC
320 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCC
* * * * * * **
21930119 AGAGGAGCGGGATACGCAAGCCGGGGATCGACCAGGACCCCCTCTGCGTGCTACCGATCCGGGAG
384 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
* * *
21930184 TCGCAACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGAC
449 TCGCAACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * * * *
21930249 GAAACGAGCGGGCGGG-GGGCGGGCAGTATGTCGACCAGAGAAACGGGATGTGGAAGCCGTGGAT
513 GAAACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * * * *
21930313 CAAAAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTTTGCATGCCAATGGCATTTTTATGG
578 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* * *
21930378 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTTACGTGAAGTTTCATAGCAAGACAACTCGTTT
643 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * * * **
21930443 TCTCTTTTTAATGATTTTCGAAACTTTTTGTGGTTTG-GCATTTTTTAAAATTTTTTTAGAAGGA
708 TCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAG-ATTTTTTAAAATTTTTTCGGAAGGA
* * * *
21930507 TTTTTGTCCCTAAACTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
772 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
21930572 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
837 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
21930632 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGAGGGTGTTAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
21930697 TCGAGGTTTGATGAGGGATAGGGGTCCAATATAAAGGCTAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
21930762 GTGCGCACACCCCCTCCGACCCCCTCGGATTGCCGAAACCCCAATG-CGACCGGTCAGGTTCTCC
131 GTGCGCACA-CCCC-CCGGCCCCC-CCGATCGCCGGAACCCCAATGCCG-CCGGTCAGGTTCTCC
* * * * ** *
21930826 GGTGATGCTCCGGCGATGGTGCCCTGACGATGAAAAATGCGGCACCAGCACATGCTTGAGCCCAA
192 GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
*
21930891 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC-----
257 CATGTGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * *
21930951 CT---AA-G---T-CG-AT--C----T--A--CA--AAACAAGTGTGCGAGCGCTCAACCGGCCA
321 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCA
** * * * * * * * *
21930995 GA-GGGTAGGATGCGCAAGTCGGGGATCAACTGGGTCCCACTCTGCATGCTGCCAATCCTACTAT
385 GAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGT
* * * * * *
21931059 CGTAACCCTCAGT-TCGGTCTGATCTTAGACTGGGAATGAACTTCATATGCCTAAGCCAACCTAC
450 CGCAACCCTCGGTCT-GGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * *
21931123 GAAACAAGCGGGCGGGCGGGCGGGGACTACGTCGGCCAGAGAGACGGGATGCACAAGCCATGGAT
513 GAAACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * * ** *
21931188 TGATAGGGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGAGATTTTTATTG
578 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
*
21931253 CTTGTAAATTCATTA-AATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTT
643 CTTGTAAATTCA-TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* ** *
21931317 TTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
707 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGA
* * * *
21931382 GTTTTGGCCCCAAACTTGGTAGACGTGATCTTTTTATGTTTGTTGGCATGTACAAAAAAATTCAG
772 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* * *
21931447 GTAAAAACTCGAAGTGTAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGA
837 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
21931507 CACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
21931572 TCAAGGTTTGATGAGGGATAGGGGGCTAATATAAAGGCCAAGTACCAGCACCCATCACACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
21931637 GTGCGCACACCCCCCCGGCCCCCCCGATCACCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
131 GTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * * *
21931702 GATGCTCCGACGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCGAACCTAGCCT
195 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * **
21931767 GTGCTGTCGCAACCCTCAGTCGAGTCCAATCTTAGACAAGGAATGAACTCCGTATGCTTAGACTG
260 GTGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * *
21931832 GGAATGAACTTCGTATGCGTAAGTCAACCCACGAAACGAGCATGCGGGCG-TGCAGCCGACGAGA
324 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT-CAGCCG-CCAGA
* * * * ** * * * *
21931896 GAGGTGGGATGCGTAAGCCGGGGATAGGTCGGGTCCCCCTCGGTGTGCTACCGATCCTGCTGTCA
387 GGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCG
* * * * *
21931961 CAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAATTCCGTATTCCGAAGCCAACCGACGAA
452 CAACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * *
21932026 ACGAGCGGGCGGGCGGGCGTTCGGGTACTACGCCGGCCAGAGAGACGGGATGTGCAAGACGTGGA
516 ACGAGCGGGCGGGC--GAG--CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * *
21932091 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTCTG
577 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* *
21932156 GCTTGTAAATTTATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
642 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
21932221 CTCTATTTTTCATGATTTTTGAAACCTTTTGCGGTTC-AGGATTTTTTAAAATTTTTTCGAAAGG
707 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGG
** * * ** * *
21932285 AGTTTTCACCCCAAACTTGGTAGACGTGATCCTTGTATTTCTATTGGTGTGCACAAACAAATCCA
771 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* * *
21932350 ACTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAGAAAAGTGTCCCCATTTCAGA
836 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
21932411 CACTTCAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTTAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
21932476 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * ** * * * *
21932541 GTGCGCACACCCCCTGGCCCCCCCGATCACCGGAACCCCAACACCGTCGATCAAGTTCTCTGGCG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* ** *
21932606 ATGCTCCTACGATGGTGCCCCGTTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * *
21932671 TGCTGCCACAACCCTTGGTCTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTAG
261 TGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
21932736 GAATGAACTCCGTATGCCTAAGTCAACCTACGAAACGAGTGTGCGGGCGCTCAGCCGGCTAGAGG
325 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAGAGG
* * ** * * * *
21932801 GGCGGGATGCGCAAGTCGGGGATCGGCTAGGTCCCCCTCTACGTGCTGTCAATCTTGCTG-CTGC
389 GGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTC-GC
* * * *
21932865 AACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAA
453 AACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * * * *
21932930 CGAGCGGGCGGGCGGTCGGGCGGGCATTACGTCGGCCAGAGAGATGAGATGCACAAGCCATGGAT
517 CGAGCGGGC--G-GG-CGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* ***
21932995 CGATAGGGTGGTAGGTGGGTTTAGGCACATATTCATATTTCTATGTGCCAATGCCATTTTTATGG
578 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
*
21933060 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTT
643 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
21933125 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-ACGATGTTTTAAAATTTTTTCGGAAGGA
708 TCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGA
* **
21933189 GTTTTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTCACATGCACAAAAAAATTCAG
772 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* * * * * *
21933254 CAAAAAACTCGAAGTGCATAAGATTTTGTAACCATTTCAAAAAAAGTGTCCCCATTTTCGGA
837 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCA-TTTCAGA
* *
21933316 CACTTTAGTGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
21933381 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
*
21933446 GTGCGCACACCCCCCTCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
131 GTGCGCACA-CCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * *
21933511 CGATGCTCCGACGATGGTGCCCCGATGAAGAGAAATGTGGCACCAGCACATGCCCGAGCCCAGCA
194 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * *
21933576 TGTGCTGTCGCAACCCTCGGTCTGGTCTGTTCTCAGACTGGGAATGAACTCCATATGCTTAGACT
259 TGTGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* *
21933641 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTG-TCCAGCCGGCCAG
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT-CAGCC-GCCAG
* ** * * * *
21933705 AGGGGTGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCATACTGCCGATCTTGCTGCC
386 AGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTC
* * * * * * **
21933770 ACAACCCTCGGTCTGGTCTGATCTTAGACTAGGAAAGAACTTCGTATGGCTAAGCCAACTAACGA
451 GCAACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* ** * * * * *
21933835 AACGAGC---AGGTAG-GCGGACACTACGTCAGCCAGAGAGACGGGATGCACGAGCCGTGGATCG
515 AACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
** * *
21933896 ATAGAATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGTCATTTTTATGGCT
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* *
21933961 TGCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTC
645 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * ** * * * *
21934026 TTTTTTTAACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTTGGAAGGATTT
710 TATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * *
21934091 TTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTTTGGCATGCACAAAAAAAGTCAGG
775 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTA--TTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
21934156 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCTATTTCAGA
838 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21934215 CACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
21934280 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
21934345 GTGTGCACACCCTCCGG--CCCCCGATCGTCGGAACCCCAATACCGCCGGTCAGGTTCTCCGACG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* **
21934408 ATGC-CCAGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCTTAGCCCAGCAT
196 ATGCTCC-GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* ** * * * *
21934472 GTACTGTTGCAACCCTCGATCCGATCTGGTCTTAGACTGGGAATGAACTCCG-ATTGCTTAGACT
260 GTGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGTA-TGCTTAGACT
* * * * *
21934536 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAACTGGCAGAG
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCAGAG
* * * * *
21934601 GGGCGGGATGCGCAAGCCGTGGATCGACCGGGTCCCCCTCTGCGTGTTGTCGATCCTGCTGCCAC
388 GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGC
*
21934666 AACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
453 AACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
21934731 CGAGCGGGCGGACGGGCGGGCACTACGTCAGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
517 CGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* ** * *
21934796 AGGGTGGTAGTTGGGTTTAGGCTGATCTTCATATTTCTACATGCCAATGCTATTTTTATGGCTTG
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
* * ** * *
21934861 TAAATTCATACAATGGTCCCTTAAGCCTTCACATCAAGTTTCATGGCAAGGTGACTCCTTTTCCA
647 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * * *
21934926 -TTTTCACGATTTTTAAAACTTTTTACGGTTCGGGATTGTTTAAAATTTTTTCGGATGGATTTTT
712 TTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
** *
21934990 GGCAACAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCAC------A---A---AAA
777 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
* *
21935043 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCA-TTCATA
842 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
21935097 CACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
21935162 TCGAGTTTTGATGAGGGATAGGGGGCTAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCTT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
21935227 ATGCACACACACCCCCTGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGG---T----
131 GTGCGCACAC-CCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
**
21935285 ---T-CTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCTCC-AGCCCAGC
194 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGC-CCGAGCCCAGC
* * * * * * *
21935345 ATGTGCTGTCGCAACCCTCGGTCTGGTTCGAT-ATAGATTGGGAATGAACT-CATATGCTTAGAT
258 ATGTGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * *
21935408 TGGGAATGAACTCTGTATGCCTAAGTCAACTCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAA
322 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAG
* * * ** *
21935473 AGGGGCGGGATGCGCAAGCCGGGGATCCG-TCAGGTCCCCCTCTGCGTGGTATCGATCCTGCT-A
386 AGGGGCGGGATGCGCAAGCCGGGGAT-CGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGT
* * ** * * *
21935536 CTGAAACCCTCGATCTGGTGTGATCTTAGACTAGGAATGAACTCTGTATACCTAAGCCAACCGAC
450 C-GCAACCCTCGGTCTGGT-CCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * *
21935601 -AAACTAAGCGGGCGGACAGATGGGCAGGTACTACGTCGGCCAGAGAGACGGGACGCGCAAGCCG
513 GAAAC-GAGCGGGCGGGC-GA---GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
21935665 TGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTATGCATGCCAATGCCATTTT
573 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
21935730 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
638 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** ** *
21935795 CGTTTTCTATTTTTCACGATTTTCAAAAGGTTTTGCGGTTCGCA-TTTTTTTAAAATTTTTT-GG
703 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCG-AGATTTTTTAAAATTTTTTCGG
* * *
21935858 AAGGAGTTTTGGACCCAAACTTGGTACACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAA
767 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
21935923 TTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAA
832 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21935988 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTTTGTA-TT
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG-AGTT
* * * * * *
21936052 CTCGTGGTTTGATAAGGGATATGGGCCCAATATAAGGGTCAAGTACCATCACCCATCGCACATCA
65 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** * * * * **
21936117 TGTACGCACACCCCCCGGCCCCCCCGATCATCAGAACCCTAATGCCGTCAGTCAGGTTCTCCGAT
130 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * *
21936182 GACGCTCC-AGCGATGGTGCCCCGTCGAAGACAAATGCGGCACCAGCACATGCCCGAGCCCAGCT
195 GATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* *
21936246 TGTGCTGCCGCAACCCTCGATCTTGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
259 TGTGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * *
21936311 GGGAATGAACTTCGTATGCCTAAGTCAACCCA-TAGAACGAGCGTACGGGCGCTCAGTCGGCCAT
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGA-AACGAGCGTGCGGGCGCTCAG-CCGCCAG
* * * *
21936375 AGGGGCAGGATGCGCAAGCCGGGGATCGACCGGGTCCACCTCTGCGTGCTGCCGATCCTACTGCC
386 AGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTC
* ** * * * *
21936440 ACAACCCTCAATCCGGTCCAATCTTAGACTGGGAATGAACTACGTATACCTAAGCCAACCAACGA
451 GCAACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * *
21936505 AACGAGCGGGCGGGC-A-C---TA-TA--CCGGCCAGAGAGACGAGATGAGCAAGCCGTGGATCG
515 AACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* ***
21936562 ATAGGGTGGTAGGTGGTTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCT
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
*
21936627 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTC
645 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * *
21936692 TATTTATCATGATTTTTGAAACCTTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTT
710 TATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTT
*
21936757 TTGGCCCCATACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
775 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
21936822 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGA
840 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21936879 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGGGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
21936944 TTGAGGTTTCATGAGGGATAGAGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * ** * * *
21937009 GTGCGCACACACCCCGGGCCCCCTAATCGCTGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * * * *
21937074 ATGCTCCGACGAT-GTGACCCGACGAAGAAAAATGTGACGCCAGCAAATGCCCAAGCCCAGCATG
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * *
21937138 TGCTGTCGCAACCCTCGGTCTAGTCTGATATTAGACTAGGAATGAACTCCATATGCTTAGACTGG
261 TGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
21937203 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGTGTGCGGCCGCTCAGCCGCCAGAGTG
325 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCAGAGGG
* * * * * *
21937268 GCGGGATGCGCAAGCCGGGGATCGACCGAGTCCCACTCTGCGTGCTGCTGATCCTACTATCACAA
390 GCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGCAA
* *
21937333 CCCTCGGTCTGGTCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAGGA
455 CCCTCGGTCTGGTCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* * ** * * *
21937398 GCGGGCGGGCGAGTGGGCATTACGTTGACCACAGAGACGGGATGCGCAAGTCGTGGATCGATAGG
520 GCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
** *
21937463 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAAT-TCATTTTTATGGCTTGTAA
585 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
*
21937527 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTT
650 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * * *
21937592 TTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTCAAATTTTTTCGGAAGGACTTTTGGT
715 TTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
* *
21937657 CCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAAC
780 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
* *
21937722 TCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTACCCATTTCAGA
845 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
21937774 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
21937839 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * * *
21937904 GTGCGCACA-CCCCCAGCCATCCTGATCGCCGGAACCTCAATGCCGCCGGTCAGGTTCTACGACG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * * *
21937968 ATGCTCCGACGATGGTGACCCAGA-GAAGAAAAATGTGACACCAGCAGATGCCCAAGCCCAGCAT
196 ATGCTCCGACGATGGTG-CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * *
21938032 GTGCTGCCGCAACCCTCGGTCCAGTCCGATATTAAACTAGGAATGAACTCCGTATGCTTAGACTG
260 GTGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* *
21938097 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAG
324 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAGAG
* * * * * *
21938162 GGGCGAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTTTGCGTGATGCCAATCCTGCTATCGT
388 GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGC
* * *
21938227 AACACTCGGTCTGGTCCAATCTTAGACTGGGAATGAGCTCCGTATGCCTAACCCAACCGACGAAA
453 AACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
21938292 CGAGCGGGC--G-GA-----CACAACGCCGGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGAT
517 CGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
*
21938349 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATAGCTTG
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
21938414 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
647 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* * * * * *
21938479 TTTTTCACAATTTTGGAAAATTTTTGTGGTTCGGGATTTTTTTAAAATATTTTCGGAAGGAGTTT
712 TTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGA-TTTTTTAAAATTTTTTCGGAAGGAGTTT
* * *
21938544 TGGCCCCAAACTTGGTAGATGTGAT-CTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAA
776 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
* *
21938608 AAACTCCAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
841 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21938664 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
21938729 TCGAGGTTTGATGAGAGATAGGGGGCGAATATAAGGGCCGAGTTCCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
21938794 GTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCTGCCAGTCAGGTTCTCCGGC
131 GTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * * * * * *
21938859 GAAGCTCGGAAGATGGTGCCCCGGCGAAGAAAAATGTGGCACCAGCACAAGCCAGAGCCCAGCAT
195 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * * **
21938924 TTGCTGCCACAACCCTCAGTCCGATCCAATCTTAGACTGGGAATGAACTCTATATGCTTAGACTG
260 GTGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * *
21938989 GGAATTACCTCCGTATGCCTAAGTCAACCCATGAAACGAACTTGTGGGCGCTCAGCCGGCCAGAG
324 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAGAG
* * * ** * * *
21939054 GGGCGAGATGCACAAGCCGGGGATCGGCTAGGTCCACCTCTGCATGCTGTCGATCCTGCTG-CAG
388 GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTC-G
* * * * *
21939118 CAACCTTCGGTCCGATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
452 CAACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-A
* * ** *
21939183 ACGAGCGAGCGGGCGGGCGGGCGGGCAGTACGCCGGCCAGAGAGACAAGATGCACAAGCCGTGGA
515 A--A-CGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
21939248 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
577 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
21939313 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
642 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* ** * *
21939378 TTTTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTCTTT-GAAAGG
707 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTT-TTTCGGAAGG
* * * *
21939442 AGTTTTGGCCCCAAACTAGGTAGATGTGGTCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCA
771 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
21939507 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCTGA
836 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* ** **
21939568 CACTTTAATGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGCATGTTTGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
21939633 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
21939698 GTGCGCACACCCCCTGGCCCCCCTGATCACCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGTG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
** * * *
21939763 -TCGCTCCGGGGATGGTGCCCCGACGAAGAAAAATGCGGCATC-GAAACATGCCTGAGCCCAGCA
196 AT-GCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG-CACATGCCCGAGCCCAGCA
* * * * *
21939826 TGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTGAGATTGGGAATGAACTCCGTATGCTTAGACT
259 TGTGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
**
21939891 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTAGGCCAGA
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGCCAGA
** * * * * * * * *
21939956 GATGCAGGATGGGCAACCCGGGGATCGGCCAGGTCCCCCTCTGCATGCTGCCAATCCTGCTGTTG
387 GGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCG
* * * * *
21940021 CAACCCTCAGTCCGATGT-GATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAACCGACGA
452 CAACCCTCGGTCTG--GTCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * * * *
21940085 AACAAACGGGC--G-GA-CGGCCACTACGCCGACCAAAGAGACGGGATGCGCAAGCCATGGATCG
515 AACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
21940146 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * *
21940211 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTT
645 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * *
21940276 TATTTTTCATGAGTTTTGAAACTTTTTGCGGTTCAAGATTTTTTTAAA-TTTTTCGGAATGA-TA
710 TATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGT-
* *
21940339 TTTGGCCCCAACCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCT
774 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
21940404 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAGAAAGTGTCCCCATTTCAGA
839 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21940462 CACTTTAATGGCTACTGGCAGCGAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
21940527 TCAAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * *
21940592 GTGTGCACA-CCCCCGGCCCTTCCGATTGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * *
21940656 ATGCTCCGGCGATGGTGCCTCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATG
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
**
21940721 TGCTGCCATAA----C-GTC-G--C--TC-----C------T--A-TCCG-ATG-TTAGACTGGG
261 TGCTGCCGCAACCCTCGGTCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * * * *
21940760 AATGAACT-CGTATGCCTAAGTCAATCAACGAAACGAGCGTGTGTGCACTCAGTCGGCCAAAGGG
326 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGCCAGAGGG
* * * * * * ** *
21940824 GCGAGATGCGCAAG-TGGAGGATCGACCGGGTCCCCTTCCGTGTGCTGCCGATCTTGCTACCACA
390 GCGGGATGCGCAAGCCGG-GGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGCA
* * *
21940888 ACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCT-A---AA---ATGAAAC
454 ACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * *
21940946 GAGCGGGTGGGCAGCCAGGCAGGCACTACGCCAGCCAGAGAGACGAGATGCACAAGCCGTGGATC
518 GAGCGGGCGGGC-G--A-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
21941011 GATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCAGCGTGCCAATGCCATTTTTATGGC
579 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* * *
21941076 TTGTAAACTCATATAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTT
644 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * *
21941141 CTATTTTTCATGATTTTTGAAACCTTTTGCGGTTC-AGGATTTTTTAAAATTTTTTCAGAAGGAA
709 CTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAG
* * * * *
21941205 TTTTGGCCCTAAACTTGGTAGATGTGATCATTGTATTTTTTTTGGCATGGA-AAAAAAATTCAGC
773 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
* *
21941269 TAAAAACACGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
838 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
21941328 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTT
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
21941393 TCGAGCTTTGATGAGGG-TA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
21941456 GTACGCACA----------CACCC---C-CCGG----CC----CCGACGGTTAGGTTCT-C--CG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
*
21941496 --G-T-----GATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * ** *
21941553 TGCTACCGCAACCCTCCGTCTAGTTTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGG
261 TGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
21941618 GAATGAACTCCGTATGACTAAGTCAACCCATGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGCGG
325 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAGAGG
* * * * ** * ** *
21941683 GGCGGGATGCGTACGTCGGAGATCGGGCGGGTCCCCCTCTACGTGCTATCGATCCTGCTGTCGGA
389 GGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGCA
** * * * * * *
21941748 ACCCTCGGTCCAGTCTGATCTTAGAGTGGGAATGAACT-TGCATGCCTAAGCCAACCGGCGTAAC
454 ACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * * * * *
21941812 GAGCGGGCGGGCAGGCGGGCGGGCACTATGTCGGCCAAAAAAATGGGATGCGCAAGTCGTGGATC
518 GAGCGGGC--G--GGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * * *
21941877 GATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTACGTGCCAATGCCAATCTTT-TGG
579 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC-ATTTTTATGG
* * *
21941941 ATTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTC
643 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
21942006 TCTATTTTTCACGATTTTTG-AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAG
708 TCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAG
*
21942070 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTACTTTTT-TTGGCATGCATAAAAAAATTCAG
773 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAG
* * *
21942134 CTAAAAACACGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATCTCAGA
837 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
21942194 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCCCTTTAA-GGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
21942258 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * ** * * *
21942323 GTGTGCACACCCCCCGGCCTCCCCGATCGTCGGAACCCAAATGCCATCGGTCAAGTTTTTCGGCG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* *
21942388 ATGCTCCGACGATAGTGCCCCGACGAAGAAAAATGCGGCA-CAGCACAT-CCTCGAGCCCAACAT
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-CGAGCCCAGCAT
* * * ** * * *
21942451 GTACTGTCGCAGCCCTCAATCCGATCCGATCTTAGACTTGGAATGAACTACGTATGCTTAGACTG
260 GTGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * *
21942516 GGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTGCGGGAGCTCAGCCGGCCAAAG
324 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC-GCCAGAG
* ** * * * *
21942581 GGGCGGGATGCGCAAGCAGGGGATCGGTCGGGTCCCCCTCTACGTCCTGCCGATCTTGTTG-CTG
388 GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTC-G
*
21942645 CAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
452 CAACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * *
21942710 ACGATCGGGCGGGTGGGCGGACAGGCACTACGTCGGCCAGAGAGACGGGATGCGAAAGCCGTGGA
516 ACGAGCGGGCGGGCGAGC-G---GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
21942775 TCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACATGCCAATGCCATTTTTATG
577 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* *
21942840 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATT
642 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * * *
21942905 TTCTATTTTTCACGATTTTTGAACCTTTTTGCGGTTTGGGATTTTTTTAAATCTTTTCAGAAGGA
707 TTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGA
* * * * * *
21942970 -TCTTTTGCCCCAAACTTGGTAGATGTGCTCCTTGTATTTTTTTTGGCTTGCAAAAAAAAATTCA
772 GT-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
21943034 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
836 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
21943095 CA-TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
21943159 TCGAGGTTTGATAAGGGATAGAGGGCCAATATAAGGGCCAGGTACCAGCACCCATCGTACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * * *
21943224 GTGCGCACACCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCTACCGGTCAAGTTCTTCGACG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * *
21943289 ATTCTCCGACGATGGCGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * *
21943354 TGCTACCACAACCCTCGGTCAAATCCGATCTTACACTTGGAATGAACTTCC-TATGCTTAGACTG
261 TGCTGCCGCAACCCTCGGTC-AGTCCGATCTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTG
* * *
21943418 GGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAACGTGCGGGCGCTCAGCCGACTAGAG
324 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG-CCAGAG
** * * * * * *
21943483 GGGTAGGTTGCGCAAGCCGGGGATCGATCAGGTCCCCCTCTACGTGCTGCCAATCCTACTG-CTG
388 GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTC-G
* *
21943547 CAACCCTTGGTCTGGTCCAGTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAA
452 CAACCCTCGGTCTGGTCCA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* ** * * *
21943612 ATGAGCGGGCGGGCGA----TAACTACGCCGACCAGAGAGACGGGATGCGTAAGCCGTGGATTGA
516 ACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
*
21943673 TAGGGTGGTAGGTGGGTTTAAGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
581 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* *
21943738 GTAAATTCATACAATGGTCCCTTGAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCT
646 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* ** * *
21943803 ATTTTTCATGATTTTTGAAACTTTTTGTAGTTC-AGGATTTTTTAAAATTTTTTCGAAATGAGTT
711 ATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTT
* ** * * *
21943867 TTCGATCCAAACTTGGTAGACGTGATCCCTCTATTTTTCTTGGCATGCACAAAAAAATTCAGCTA
775 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
21943932 AAAACTCGAAGTGTACAAGATTGTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
840 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
21943989 CACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTCTGAGTT
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTT
21944054 CTCGAGGTTTGATGAGGGATAGGGGGCCACA-ATAAGGGCCAAGTACCAGCACCCATCGCACATC
65 CTCGAGGTTTGATGAGGGATAGGGGGCCA-ATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
21944118 GTGTGCGCACACCCCCCTAGACCCCTCCGATCGTCGAAACCCCAATGCTGCCGGTCAGG-T-T--
129 ATGTGCGCACACCCCCC--GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * *
21944179 -----T--TCCAACAATGGTGACCCGGCGAAGAAAAATGCGGCAGCAGCACATGCCCGAGCCCAG
192 GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * * * * *
21944237 CATGTGCTGCCGCAGCCCTTGATCCGATCCAATCTTAGACTTGGAATGAACTTCGTATCCTTAGA
257 CATGTGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * *
21944302 CTGGGAATGAGCTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGCCA
321 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC-CGCCA
* ** * *
21944367 AAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCTGATCCTGCTG-
385 GAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGT
* * * *
21944431 CTGCAACCCTTGGTCCGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAT
450 C-GCAACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * *
21944496 GAAACGA--------GC-A---TGTACTATGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGAT
513 GAAACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * * * *
21944549 CGATAGGGTGGTACGTCGATTTAGGCACATCTTCATATTTCTGCATACTAATGCCATTTTTATGG
578 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* * * *
21944614 CTTGTAAATTCATAAAATGATCCCTTAAGCTTTCACATGAAGTTTCATGGCAAGACGACTCGTTT
643 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** * **
21944679 TCTATTTTTCACAATTTTCAAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTCAAAAGGA
708 TCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGA
* * *
21944743 TTTTTGGCCCCAAACTTGGTAGACGTGACCCTTGTATTTTTGTTGGCAAGCA-AAAAAACATTCA
772 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCA
*
21944807 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAA
836 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
21944868 TACTTTAATGGATACTGGCCGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * ** * * *
21944933 TCGAGGTTTGATGAGTGATAGGAGGCCAATATAAATGCCAACTACTAGCACCCATTGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * ** *
21944998 GTGTGCACACCCCCCAGGCCCCCTCGAACGCCGGAACCCTAATGTTGCCGGTCAGGTTCTCCAGC
131 GTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* * ** * *
21945063 GATGCTCTGGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCTAGCAT
195 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
21945128 GTGCTACCGTAACCCTCGGTCCGGTCCTATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
260 GTGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * *
21945193 GGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCGCTCAGTCGACCAAAG
324 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG-CCAGAG
* * * * * *
21945258 GGGCGGGATGCACAAGCCGGGGATCGATCGGATCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGT
388 GGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGC
* * * * * * *
21945323 AGCCCTCGGTCCGATCTGATTTTAGACTGGGAATGAACTCCGTATGCCTAAACCAATCGAC-AAA
453 AACCCTCGGTCTGGTC-CATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * *
21945387 --A-CGAGC--G-G-GTGGGCACTACGCCGGCCAAAGAGACAGGATGCGTAAGCCGTGGATCGAT
517 CGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* * *
21945445 AGGGTGGTAGGTGGGTTTAGGCAAATCTTCATATTTCTACATGCCAAAGCC-TCTTTTATGGCTT
582 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT-TTTTATGGCTT
*
21945509 GTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
646 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * * *
21945574 ATTTTTCATGATTTTTGAAACTTTTTACAGTTCG-GAATTTTTTAAAATTTTTT-AGAAGTAGTT
711 ATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAG-ATTTTTTAAAATTTTTTCGGAAGGAGTT
*
21945637 TTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
775 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*
21945702 AAAACTCGGAGTGGTACAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTT-AGA
840 AAAACTCGAAGT-GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
21945758 CACTTTAATGGCTAACTGGCAGCAAACCTGTAAAATCGCAAATGCTCTTTAAGGGGTTGTGAGTT
1 CACTTTAATGGCT-ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
21945823 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAATATAAGGGCCAAGTACCAGCACC
65 CTCGAGGTTTGATGAGGGATA---GG---------GGGCCAATATAAGGGCCAAGTACCAGCACC
* **
21945888 CATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCC-ATGGTC
118 CATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTC
* * *
21945951 AGGTTCT-C--CG--G-T-----GA---TGCCCCGACGAAGAAAAATGTGGTACCAGCACATGCT
183 AGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
* * * * * * * *
21946002 CGAGCCTAGCATGTGCTGTCACAACCCTCAGTCCGATCCTATCCTAGACTGGGAATGAACTTCGT
248 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCAG-TCCGATCTTAGACTGGGAATGAACTCCGT
* * *
21946067 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCATCCCATGAAACAAGCGTGCGGGCGCTC
312 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * * * *
21946132 AGCTGGCCAGAGGGGCGGGATACCCAAGCCGGGGATCGACCGGGTTCCCCT-TCGTGTGTTGCCG
377 AGC-CGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCT-GCGTGCTGCCG
* * * * * * * *
21946196 ATCCTGCTATCACAACCTTCGATCCGGTCCAATCTTAGATTGGGAATGAACCCCATATGCCTAAG
440 ATCCTGCTGTCGCAACCCTCGGTCTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
21946261 CCAACTGACAAAACGAGCGGGC--G-G-GCGGGCACTATGTCGGCAAGAGAGACGGGATGCGCAA
504 CCAACCGACGAAACGAGCGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
21946322 GCCGTTGATCGAATAGGATTGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
569 GCCGTGGATCG-ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
21946387 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGA
633 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
21946452 TGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTTAAATTTTT
698 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
* * *
21946517 TCAGAAGGAGTTTTGGCCCCAGACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
763 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
** * * * *
21946582 GCAATTCAGCTAAAAACGCGAAGTGTGCAATATTTTGTGACCATTTGAAAAAAATGTCCCCATTT
828 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
21946647 CAGA
893 CAGA
* * *
21946651 CAGTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTC
1 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
21946716 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
66 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
21946781 GTGCGCACACCCCCTGG-CCCCCCGATCGCCGGAACCCCAATACCGTCGGTCAGGTTTTCCGGCG
131 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * * * * *
21946845 ATGGT--G-C-CTAG-G---CGAAG-A-AAAAAT-TGACACCAGCACAT-CCTAGAGCCCAGCAT
196 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-CGAGCCCAGCAT
* *
21946898 GTGCTGCCGCAACCCTCGGTCCAGTCCTATCTTAGACT-GGAAGTGAACTCTGTATGCTTAGACT
260 GTGCTGCCGCAACCCTCGGT-CAGTCCGATCTTAGACTGGGAA-TGAACTCCGTATGCTTAGACT
*
21946962 AGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
323 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
21947008 TACCGATCCT
Statistics
Matches: 17376, Mismatches: 2098, Indels: 953
0.85 0.10 0.05
Matches are distributed among these distances:
832 59 0.00
836 1 0.00
837 4 0.00
838 1 0.00
839 1 0.00
840 2 0.00
843 16 0.00
847 2 0.00
848 1 0.00
851 4 0.00
854 1 0.00
855 3 0.00
856 1 0.00
857 3 0.00
858 14 0.00
859 26 0.00
860 123 0.01
861 4 0.00
862 1 0.00
863 3 0.00
864 55 0.00
865 240 0.01
866 669 0.04
867 114 0.01
868 6 0.00
869 2 0.00
870 3 0.00
871 1 0.00
872 1 0.00
873 205 0.01
874 262 0.02
875 609 0.04
876 63 0.00
877 309 0.02
878 393 0.02
879 600 0.03
880 106 0.01
881 18 0.00
882 139 0.01
883 60 0.00
884 388 0.02
885 16 0.00
886 298 0.02
887 298 0.02
888 330 0.02
889 256 0.01
890 815 0.05
891 835 0.05
892 707 0.04
893 136 0.01
894 784 0.05
895 1049 0.06
896 552 0.03
897 508 0.03
898 231 0.01
899 923 0.05
900 1063 0.06
901 719 0.04
902 444 0.03
903 1229 0.07
904 966 0.06
905 237 0.01
906 87 0.01
907 378 0.02
908 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
TGCTGCCGCAACCCTCGGTCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGCCAGAGGGG
CGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGTCGCAAC
CCTCGGTCTGGTCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
CGGGCGGGCGAGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
TCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
Found at i:21941618 original size:26 final size:26
Alignment explanation
Indices: 21941582--21941633 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
21941572 CTAGTTTGAT
21941582 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21941608 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
21941634 ACTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21942519 original size:26 final size:26
Alignment explanation
Indices: 21942481--21942533 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21942471 CCGATCCGAT
*
21942481 CTTAGACTTGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
*
21942507 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTACGTATG
21942533 C
1 C
21942534 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:21943421 original size:26 final size:26
Alignment explanation
Indices: 21943383--21943435 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
21943373 CAAATCCGAT
*
21943383 CTTACACTTGGAATGAACTTCC-TATG
1 CTTACACTGGGAATGAAC-TCCGTATG
*
21943409 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
21943435 C
1 C
21943436 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
25 3 0.12
26 21 0.88
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:21945187 original size:26 final size:26
Alignment explanation
Indices: 21945158--21945210 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21945148 CCGGTCCTAT
21945158 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21945184 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21945210 C
1 C
21945211 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21945863 original size:12 final size:12
Alignment explanation
Indices: 21945846--21945876 Score: 62
Period size: 12 Copynumber: 2.6 Consensus size: 12
21945836 GAGGGATAGG
21945846 GGGCCAATATAA
1 GGGCCAATATAA
21945858 GGGCCAATATAA
1 GGGCCAATATAA
21945870 GGGCCAA
1 GGGCCAA
21945877 GTACCAGCAC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.39, C:0.19, G:0.29, T:0.13
Consensus pattern (12 bp):
GGGCCAATATAA
Found at i:21946082 original size:26 final size:26
Alignment explanation
Indices: 21946046--21946096 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
21946036 GATCCTATCC
*
21946046 TAGACTGGGAATGAACTTCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
21946072 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
21946097 CTAAGTCATC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:21946970 original size:26 final size:26
Alignment explanation
Indices: 21946928--21946980 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
21946918 CCAGTCCTAT
*
21946928 CTTAGACTGGAAGTGAACTCTGTATG
1 CTTAGACTGGAAGTGAACTCCGTATG
21946954 CTTAGACTAGGAA-TGAACTCCGTATG
1 CTTAGACT-GGAAGTGAACTCCGTATG
21946980 C
1 C
21946981 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 21 0.84
27 4 0.16
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAGTGAACTCCGTATG
Found at i:21953208 original size:26 final size:26
Alignment explanation
Indices: 21953172--21953224 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21953162 CTGGTCCGAT
*
21953172 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
21953198 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGATTGGGAATGAACTCCGTATG
21953224 C
1 C
21953225 CTAAGTCATC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.15, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCGTATG
Found at i:21954938 original size:26 final size:26
Alignment explanation
Indices: 21954902--21954954 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21954892 CTGGTCCGAT
*
21954902 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21954928 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21954954 C
1 C
21954955 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21955826 original size:26 final size:26
Alignment explanation
Indices: 21955797--21955849 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21955787 CCGATCCGAT
21955797 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21955823 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21955849 C
1 C
21955850 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21956728 original size:26 final size:26
Alignment explanation
Indices: 21956692--21956744 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21956682 CCGATCCGAT
*
21956692 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21956718 CTTAGACTGGGAATGTACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21956744 C
1 C
21956745 CTAACTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21957622 original size:26 final size:26
Alignment explanation
Indices: 21957593--21957645 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21957583 CCGATCCGAT
21957593 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
* *
21957619 CTTAGACTGGGAATGTACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
21957645 C
1 C
21957646 CTAACTCATC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:21958018 original size:902 final size:895
Alignment explanation
Indices: 21954832--21958704 Score: 5449
Period size: 895 Copynumber: 4.3 Consensus size: 895
21954822 TGCCACCGAC
** * * *
21954832 GAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCTGGT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGAT
*
21954897 CCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * *
21954962 AACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGTCGGGCATC
131 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCGGGGATC
* * * * ** * *
21955027 GATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTACCGTGACCCTC-GATCCGATCCGATCTTA
196 GACCGGGTCCCCCTCTGCGTGCTCT-GATCCTGCTGCCGCAACCCTCAG-TCTGATCTGATCTTA
* * * * * ** **
21955091 GACTGGAAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGA-CGGATGGAAACTACG
259 GACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACAAGCGGAGCGGGCGGGCACTACG
* * * *
21955155 CCGGCAAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGCTAGGTTTAGGCACATC
324 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
21955220 TTCATATTTCTACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
389 TTCATATTTCTACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * ** *
21955285 TTCACGTGAAGTTTCATGACAAGA-TGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTATA
454 TTAACGTGAAGTTTCATGGCAAGACT-ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* * * *
21955349 CGGTTCAAGATTTTTTAAAATTTTTT-TGAAGGAGTTTTAGCCCCAAACATGGTAGACGCGATCC
518 CGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCC
* *
21955413 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAGAAAA-TCGAAGTGTACAAGATTGTGTG
583 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA-AAAACTCAAAGTGTACAAGATTTTGTG
* *
21955477 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAAT
647 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT
*
21955542 CTCAAATGTTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
712 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * * * * *
21955606 GGCCAAGCACCAGCACCCATTGCACATCATGTGAGCACACCCCCCTCCGCCCCCCTGATCGTCGG
777 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CAGCCCCCCCGATCGCCGG
** * * **
21955671 AACCCCAATGCCGTTGGTCAGGTTCTCCGGCGATGCTCCGGTGATAGTGCCCCGAC
840 AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGT
* * * *
21955727 GAAGAAAAATACGGCACCAGCACATGCCTGAGCCTAGCATGTGCTGCCACAACCCTCGGTCCGAT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGAT
21955792 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * *
21955857 AACCCACGAAACGAGCGTGCGGGCGCTCAACCAGCAAGAGCGGCGGCATGCATAAG-CACGGGAT
131 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTC-GGGGAT
* * * ** * *
21955921 CGACCGGGTCCCCCTCTGTGTGCTGTCAATCCTGCTATCACAACCCTCAGTCTGGTCTGATCTTA
195 CGACCGGGTCCCCCTCTGCGTGCTCT-GATCCTGCTGCCGCAACCCTCAGTCTGATCTGATCTTA
* * *
21955986 GACTAGGAATGAACTTTGTATGCCTAAGCCAA-TCGACGAAACAAGC-GAGCAGGCGGGCACTAC
259 GACTGGGAATGAACTTCGTATGCCTAAGCCAACT-GACGAAACAAGCGGAGCGGGCGGGCACTAC
21956049 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
323 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
21956114 CTTCATATTTCTGA-GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAG
388 CTTCATATTTCT-ACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * * * **
21956178 ACTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTT
452 CCTTAACGTGAAGTTTCATGGCAAGACTACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT
* * * ** * * *
21956243 ACGGTTTGTGATTTTTTTAAATTTTTTCGGAAGGAGTTTTCACCCCTAACTTGGTAGACATGATC
517 ACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATC
* *
21956308 CTTGTATTTTTGTTGGCATGCATAAAAAATTTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTG
582 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTG
* * * * *
21956373 ACCATTTGAAAATAGTGTCCCCAATTCGGACACTTTAATGGCTACTGGCAACAAACCTGTAAAAT
647 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT
* *
21956438 CTCAAATGCTCTTTAAGGGGGTGAGAGTACTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
712 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
21956503 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCCGGAA
777 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCCGGAA
* * * *
21956568 CCCAAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTGCCCCAGT
842 CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGT
* * * * * *
21956622 GAAGAAAAATGCGACACCAGCAAAGGCCC-AGGGCCAGCATGTGCTGCCGCAGCCCTTGGTCCGA
1 GAAGAAAAATGCGGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA
* * *
21956686 TCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGTACTCCGTATGCCTAACT
65 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
** * *** *
21956751 CAACCCACGAAATTAGTGTATAGGCGCTCAGCCGGCCAGAGGGGCAGGATGCACAAG-CTGGGGA
130 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTC-GGGGA
* * * * *
21956815 TCGACCGGGTCCCCTTCTACGTGCTACCGATCCTGTTGCCGCAACCCTCAGTCTGGTCTGATCTT
194 TCGACCGGGTCCCCCTCTGCGTGCT-CTGATCCTGCTGCCGCAACCCTCAGTCTGATCTGATCTT
* * * *
21956880 AGACTGGGAATGAGCTTCGTATGCCTAAGCCAACTGACGAAACGAGCGAGGGGGTGGCCGGGCAC
258 AGACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACAAGCG-GAGCG-GG-CGGGCAC
*
21956945 TACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
320 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*
21957010 CATCTTCATATTTCTACATGCCAAGGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTA
385 CATCTTCATATTTCTACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTA
* *
21957075 AGCCTTAATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTT
450 AGCCTTAACGTGAAGTTTCATGGCAAGACTACTCGTTTTCTATTTTTCATGATTTTCAAAACTTT
* * * * * *
21957140 TTGCGGTTCGGGATTTTTTTAAATTTTTTCAGAAGGATTTTTGGCCCCAAACATAGTAGACGTGA
515 TTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGA
* * * *
21957205 TCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGTTACAAACTCAAAGTGTACAAGGTTTTG
580 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTG
*
21957270 TGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAAA
645 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAA
* * * *
21957335 ATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTTGAGGTTTAATGAGGGATAGGGGGCCAATTTA
710 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
21957400 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCCCCGATCGCC
775 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCAG-CCCCCCCGATCGCC
* * * * *
21957465 GGAACCCCAATGCCACCGGTTAGGTTCTCCGGTGATGCTCCCGCGATGGTTCCCCGGT
838 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGT
* * * * * * * *
21957523 GAAGAAAAATGCGACACCAGCAAATGCCCAAGGCTAGCATGTGCTGTCGCAGCCCTTGGTCCGAT
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGAT
* * *
21957588 CCGATCTTAGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGTACTCCGTATGCCTAACTC
66 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* *
21957653 ATCCCACGAAACGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCGGGGATC
131 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCGGGGATC
* * * * *
21957718 GATCGGGTCCCCCCTCTGTGTGCTACTGATCCTGTTGCCACAACCCTCAGTCTGATTTGATCTTA
196 GACCGGGT-CCCCCTCTGCGTGCT-CTGATCCTGCTGCCGCAACCCTCAGTCTGATCTGATCTTA
21957783 GACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACAAGCGGGCGAGCGGGCGGGCACT
259 GACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACAAGC--G-GAGCGGGCGGGCACT
* * *
21957848 ACGTCGGCCAGAGAGATGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
321 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
21957913 ATCTTCATATTTCTACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAA
386 ATCTTCATATTTCTACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
21957978 GCCTTAACGTGAAGTTTCATGGTAAGACTACTTGTTTTCTATTTTTCATGATTTTCAAAACTTTT
451 GCCTTAACGTGAAGTTTCATGGCAAGACTACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT
* * * *
21958043 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGCAGGATTTTTGGCCCCAAACTTGGTAGACGTGAT
516 TACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGAT
*
21958108 CCTTGTATTTTTGTTGGCATGCA-AAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
581 CCTTGTATTTTTGTTGGCATGCACAAAAAA-ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTG
21958172 TGACCATTTGAAAAAAGTGTCCCCATTT-AGGACACTTTAATGGCTACTGGCAGCAAACCTATAA
645 TGACCATTTGAAAAAAGTGTCCCCATTTCA-GACACTTTAATGGCTACTGGCAGCAAACCTATAA
* * *
21958236 AATCTGAAATTCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATAT
709 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* *
21958301 AAGGGCCAAGTACCAGCACCCATCGCCCATCATGTGCGCACACCCCCC-GCCCCCCCCGATTGCC
774 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAG-CCCCCCCGATCGCC
* * * * * *
21958365 AGAACCCCAATGCCGCCGGTCAAGTTCTCCGGCAATGCTCAGGCGATGGTTCGCCGGT
838 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGT
* * *
21958423 GAAGAAAAATGCGGCACTAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGATCC-AG
1 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-
** * *
21958487 TGTGATCTTAGATTGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
65 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * *
21958552 CAACCCACGAAACGAGCGTGCGGGTGCTCAACCGACCAGAGGGGCGGGATGCACAAGTCGGGGAT
130 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCGGGGAT
* * * * * *
21958617 CGACCGAGTCCCTCTCTACGTGCTGCCGATCCTACTGCCGCAACCCTCAGTCCGAT-TCGATCTT
195 CGACCGGGTCCCCCTCTGCGTGCT-CTGATCCTGCTGCCGCAACCCTCAGTCTGATCT-GATCTT
* *
21958681 AGATTGGGAATGAACTCCGTATGC
258 AGACTGGGAATGAACTTCGTATGC
21958705 TTAGACTGGC
Statistics
Matches: 2670, Mismatches: 280, Indels: 52
0.89 0.09 0.02
Matches are distributed among these distances:
894 4 0.00
895 801 0.30
896 169 0.06
897 84 0.03
898 4 0.00
899 527 0.20
900 249 0.09
901 264 0.10
902 562 0.21
903 2 0.00
904 4 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (895 bp):
GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGAT
CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCGGGGATC
GACCGGGTCCCCCTCTGCGTGCTCTGATCCTGCTGCCGCAACCCTCAGTCTGATCTGATCTTAGA
CTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAACAAGCGGAGCGGGCGGGCACTACGCC
GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
CATATTTCTACATGCCAATGCCATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
AACGTGAAGTTTCATGGCAAGACTACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGG
TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTG
TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCA
TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCA
AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCCGGAACCCC
AATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGT
Found at i:21958532 original size:26 final size:26
Alignment explanation
Indices: 21958493--21958545 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21958483 CCAGTGTGAT
*
21958493 CTTAGATTGCGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
*
21958519 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
21958545 C
1 C
21958546 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:21958707 original size:26 final size:26
Alignment explanation
Indices: 21958678--21958730 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
21958668 CCGATTCGAT
* *
21958678 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
*
21958704 CTTAGACTGGCAATGAACTCTGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
21958730 C
1 C
21958731 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:21958790 original size:185 final size:185
Alignment explanation
Indices: 21958490--21958889 Score: 525
Period size: 185 Copynumber: 2.2 Consensus size: 185
21958480 GATCCAGTGT
* *
21958490 GATCTTAGATTGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
1 GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAA
* * * * *
21958555 CCCACGAAACGAGCGTGCGGGTGCTCAACCGACCAGAGGGGCGGGATGCACAAGTCGGGGATCGA
66 CCCACAAAACGAGAGTGCGGGCGCTCAACCGACCAGAGGGGCGAGATGCACAAGCCGGGGATCGA
* * * * * * *
21958620 CC-GAGTCCCTCTCTACGTGCTGCCGATCCTACTGCCGCAACCCTC-AGTCCGATTC
131 CCAG-GACCCCCTCTACATGCTGCCAATCCTACTACCACAACCCTCTA-TCCGATCC
*
21958675 GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCTGTATGCCTAAGTCAA
1 GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAA
* * * * * * *
21958740 CCCATAAAACGAGAGTGCTGGCGCTCAGCCGGCCAGAGGGGTGAGATGCACAAGCCGGGGATTGG
66 CCCACAAAACGAGAGTGCGGGCGCTCAACCGACCAGAGGGGCGAGATGCACAAGCCGGGGATCGA
* * *
21958805 CCAGGACCCCCTCTGCATGCTGCCAATCCTACTACCACAACCCTCTATCTGGTCC
131 CCAGGACCCCCTCTACATGCTGCCAATCCTACTACCACAACCCTCTATCCGATCC
* *
21958860 AATCTTAGACTGGGAATGAACTCCGTATGC
1 GATCTTAGATTGGGAATGAACTCCGTATGC
21958890 CTAAGCCAAC
Statistics
Matches: 186, Mismatches: 27, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
185 184 0.99
186 2 0.01
ACGTcount: A:0.24, C:0.28, G:0.26, T:0.21
Consensus pattern (185 bp):
GATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAA
CCCACAAAACGAGAGTGCGGGCGCTCAACCGACCAGAGGGGCGAGATGCACAAGCCGGGGATCGA
CCAGGACCCCCTCTACATGCTGCCAATCCTACTACCACAACCCTCTATCCGATCC
Found at i:21959615 original size:26 final size:26
Alignment explanation
Indices: 21959586--21959638 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21959576 GATGTCCGAT
21959586 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
21959612 CTTATACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21959638 C
1 C
21959639 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21960501 original size:26 final size:26
Alignment explanation
Indices: 21960463--21960514 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
21960453 CCGGTTCGAT
* *
21960463 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21960489 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21960515 ACTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.17, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21961217 original size:26 final size:26
Alignment explanation
Indices: 21961188--21961240 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21961178 ACTATCCGAT
*
21961188 CTTAGATTAGGAATGAACTCCGTATG
1 CTTAGAATAGGAATGAACTCCGTATG
*
21961214 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATAGGAATGAACTCCGTATG
21961240 C
1 C
21961241 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGAATAGGAATGAACTCCGTATG
Found at i:21962132 original size:26 final size:26
Alignment explanation
Indices: 21962103--21962155 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21962093 CCAGTCCGAT
*
21962103 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
21962129 CTTAGACTGGGAATCAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
21962155 C
1 C
21962156 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:21963567 original size:895 final size:893
Alignment explanation
Indices: 21960489--21963731 Score: 4493
Period size: 915 Copynumber: 3.6 Consensus size: 893
21960479 ACTCTGTATG
* * * * * *
21960489 CTTAGACTAGGAATGAACTCCGTATGACTAAGTCAACCCATGAAACGAGCGTGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGGACGGGCGGG
* * * *
21960554 CACTACGCCTG-CAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTTGGTGGGTTCAG
62 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
** *
21960618 GCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGATTGTAAATTCATACAATGGTCCC
127 GCACATCTTCATATTTCTACAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
21960683 TTAAGCCTTCTTGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTTGAAAC
192 TTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
*
21960748 TTTTTACGGTT-AGAGATTTTTTAAAATTTTTTGGAAGGAGTTTTGTCCCCAAACTTGGTAGACG
257 TTTTTACGGTTCAG-GATTTTTTAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* *
21960812 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAATTGTACAAGATT
321 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* * * * *
21960877 TTGTGACCATTCGAAAAAAGTGTCCCCAATTCAGACACTTTAATGGCTACTGGCAACGAACCTGT
386 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGT
* * * *
21960942 AAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGTATAGGGGGACAAT
451 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
*
21961007 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTG--CACCCCCCCGCCACCCCGATCGC
516 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGCCCCCCCGATCGC
* * * *
21961070 CAGAACCCCAATGCCGCCAGTCAGGTTCT-C--C---G-----GCGAAGGTGCCCCGACAAAGAA
581 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAA
* * * * * * *
21961124 AAATACGGCACCAGGACATGCCTGAGCCCAGAACGTGTTGCCGTAACCCTCGGTACTA-TCCGAT
646 AAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCTTCGGTAC-AGTCCGAT
* * * *
21961188 CTTAGATTAGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCC
710 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* * * ** ** * *
21961253 ATGAAACGAGTGTGCGGGCACTCAGCCAACCAGAGGGGTGGGATGTGCAAG-CTGGGGATTGGCC
775 ACGAAACGAGCGTGCGGGCACTCAGCCAGCCAGAGGGGCAGGATGCACAAGTC-GGGGATCGACC
* ** * *
21961317 GGGTACCCCTCTACGTGCTGTCGATCCTGCTGCTGCAACCTTCAGTCCGGTCTAAT
839 GAGT-CCCCTCTACGTGCTAACGATCCTGCTGCTGCAACCCTCAGTCCGGTCTGAT
*
21961373 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGTGGGCGGCGGACGGGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC------G-AGCGGACGGGC
* * *
21961438 GAGCACTACGTCGGCCTGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
59 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * * *
21961503 TAGGTACATCTTCATATTTCTATAAGCCAGTGCCACTTTTATGGCTTGTAAATTCATACAATGGT
124 TAGGCACATCTTCATATTTCTACAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* *
21961568 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCAATTTTTCATGATTTTTGA
189 CCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * * *
21961633 AACTTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACCTGGTA
254 AAC-TTTTTACGGTTCAGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTA
*
21961698 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAATAATTCAGCTAAAAACTCGAAGTGTACAA
317 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
21961763 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAAC
382 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAAC
*
21961828 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
447 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
21961893 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGGCCCCCCCG
512 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCC-GCCCCCCCG
* * *
21961958 ATCGCCGGAACCCCAATGTCACCGGTCTGGTTCTCCGACGATGCTCTGACGATGCTCCGGCGATG
576 ATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTC---C-A-------GCGATG
* *
21962023 GTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCACAACCC
630 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAA-CC
* *
21962088 TT-GGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATCAAC-TCTG
694 TTCGGTACAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTC-G
* * *
21962151 TATGCCTAAGTCAACCCACGGAACGAGCGTACGGGCGCTCAGCC-GACCAGAGGGGCAGGATGCA
758 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCAG-CCAGAGGGGCAGGATGCA
* ** * *
21962215 CAAGTCGGGGATCGACCGAGTCCCTTTCTACGTG-TTGCTGATCCTGCTGCTACAACCGTCAGTC
822 CAAGTCGGGGATCGACCGAGTCCC-CTCTACGTGCTAAC-GATCCTGCTGCTGCAACCCTCAGTC
21962279 CGGTCTGAT
885 CGGTCTGAT
* * *
21962288 GTTAGACTGGGAATCAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGAGGGCGGGTGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGA---C----GGG
* * *
21962353 CGGGCACTACGTCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGAGGGT
58 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
21962418 TTAGGCACATCTTCATATTTCTTCATGCCAATGCCAATTTTATGGCTTGTAAATTCATACAATGG
123 TTAGGCACATCTTCATATTTCTACAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
21962483 ACCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGATTCGTTTTCTAATTTTCATGATTTTTT
188 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
21962548 AAACTTTTTGCGGTTCAGGATTTTTAAAAATCTTTTTGGAAGGAATTTTGGCCCCAAACTTGGTA
253 AAACTTTTTACGGTTCAGGATTTTTTAAAAT-TTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
*
21962613 GATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
317 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
21962678 GATTTTG-GACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTAGCAGCAAAC
382 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAAC
* **
21962742 CTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTAAGTTCTCAAGGTTTGATGAGGGATAGCAGG
447 CTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
* *
21962807 CCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGACCCCCCC
511 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCG-CCCCCCC
* * * **
21962872 GATCGTCGGAACCCCAATACCGCCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCTGGT
575 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGAC
* * * * * *
21962937 GAAGAAATATGCGACCCCAGCACATG-CTCGAGCCCAGCATGTCCTGCCGCAACCTTCGGTTCGG
640 GAAGAAAAATGCGGCACCAGCACATGCCT-GAGCCCAGCATGTGCTGCCGCAACCTTCGGTACAG
* * *
21963001 TCCGATCTTAGACTGGGAATGAACTCTGTAAGCTTAGACTGGGAATGAACTTCGTCTGCCTAAGT
704 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGT
21963066 CAACCCACGAAACGAGCGTGCGGGCACTCAGCCAGCCAGAGGGGCAGGATGCACAAGTCGGGGAT
769 CAACCCACGAAACGAGCGTGCGGGCACTCAGCCAGCCAGAGGGGCAGGATGCACAAGTCGGGGAT
* * * * * * * *
21963131 CGATCGAGTCGCCCTATGCGTGCTAACGATCCTGTTGCCGTAACCCTCAGTCTGATCTGAT
834 CGACCGAGTC-CCCTCTACGTGCTAACGATCCTGCTGCTGCAACCCTCAGTCCGGTCTGAT
* *
21963192 CTTAGACTTGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGCGGGCACT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCACT
* * *
21963257 ACGCCGGCCAGAAAGACGGGATGCG-AAACCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCAC
66 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
21963321 ATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTAAATACATACAATGGTCCCTTAA
131 ATCTTCATATTTCTACAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * *
21963386 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTTAAAACTTTT
196 GCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * *
21963451 TACGATTCAGGACTTTTTAAAATTTTTTCGGAAGGCGTTTTGGCCCCAAACTTGGTAGACGTTAT
261 TACGGTTCAGGATTTTTTAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
21963516 CCTTTTATTTTTATTGGCATGCACAAAAAAATTCAACTAAAAA-TGCGAAGTGTACAAGATTTTG
325 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT-CGAAGTGTACAAGATTTTG
*
21963580 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
389 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAA
*
21963645 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAAAGGTTTGATGAGGGATAGGGGGCCAATATA
454 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATA
*
21963710 AGGGCCAAGTACAAGCACCCAT
519 AGGGCCAAGTACCAGCACCCAT
21963732 GGCAGCAAAC
Statistics
Matches: 2104, Mismatches: 192, Indels: 115
0.87 0.08 0.05
Matches are distributed among these distances:
884 41 0.02
887 20 0.01
888 168 0.08
889 28 0.01
890 255 0.12
892 9 0.00
893 37 0.02
894 7 0.00
895 330 0.16
896 114 0.05
899 1 0.00
900 1 0.00
903 9 0.00
904 266 0.13
905 7 0.00
908 2 0.00
909 4 0.00
911 1 0.00
912 2 0.00
914 89 0.04
915 518 0.25
916 195 0.09
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (893 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCACT
ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
ATCTTCATATTTCTACAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
GCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
TACGGTTCAGGATTTTTTAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAAT
CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAG
GGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGCCCCCCCGATCGCCGGAA
CCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATG
CGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCTTCGGTACAGTCCGATCTTAGA
CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAA
CGAGCGTGCGGGCACTCAGCCAGCCAGAGGGGCAGGATGCACAAGTCGGGGATCGACCGAGTCCC
CTCTACGTGCTAACGATCCTGCTGCTGCAACCCTCAGTCCGGTCTGAT
Found at i:21963807 original size:104 final size:104
Alignment explanation
Indices: 21963627--21963835 Score: 382
Period size: 104 Copynumber: 2.0 Consensus size: 104
21963617 TAATGGCTAC
21963627 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAAAGGTTTGATGAG
1 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAAAGGTTTGATGAG
21963692 GGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCA
66 GGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCA
**
21963731 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
1 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAAAGGTTTGATGAG
* *
21963796 GGATAGGGGGCCAATATAAGGGCCATGTACCAGCACCCA
66 GGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCA
21963835 T
1 T
21963836 CGCACATCAT
Statistics
Matches: 101, Mismatches: 4, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
104 101 1.00
ACGTcount: A:0.30, C:0.18, G:0.29, T:0.23
Consensus pattern (104 bp):
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAAAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCA
Found at i:21964035 original size:26 final size:26
Alignment explanation
Indices: 21964006--21964058 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21963996 CTGGTCCGAT
21964006 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
21964032 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21964058 C
1 C
21964059 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21964928 original size:26 final size:26
Alignment explanation
Indices: 21964899--21964951 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
21964889 CTGGTCCGAT
21964899 CTTAGACTGGGAATGAACT-CTGTATG
1 CTTAGACTGGGAATGAACTAC-GTATG
21964925 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
21964951 C
1 C
21964952 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:21965710 original size:26 final size:26
Alignment explanation
Indices: 21965681--21965733 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
21965671 CTGGTTCGAT
21965681 CTTAGACTGGGAATGAACT-CTGTATG
1 CTTAGACTGGGAATGAACTAC-GTATG
21965707 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTGGGAATGAACTACGTATG
21965733 C
1 C
21965734 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTACGTATG
Found at i:21966897 original size:785 final size:775
Alignment explanation
Indices: 21964608--21966967 Score: 3351
Period size: 782 Copynumber: 3.0 Consensus size: 775
21964598 TCCCCATTTC
*
21964608 AGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGT
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGT
*
21964673 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
66 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT-
* *
21964738 ATCTGCTCACACCCCCCGGACCTTCCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCTG
130 A----CAC-CACCGCCC-G--C--CCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCC-G
* * * * * *
21964803 TGA-AACTCCGGTGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCTCTAGCCCAGC
184 TGATGA-TCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGC
* * *
21964867 ATGTGCTACCGTAACCCCCGATCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
248 ATGTGCTGCCGCAACCCCCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
21964932 TGGGAATGAACTACGTATGCCTAAGTCAACCCACAAAACGAGTGTGCGACCGCTCAGCTGGCCAG
313 TGGGAATGAACTACGTATGCCTAAGTCAACCCACAAAACGAGTGTGCGACCGCTCAGCTGGCCAG
21964997 AGGGGTGGGACGCACAATCCGGGGATCGATCGGGTCCCTCTCTACGTGCTGCCGATCTTGCTGCC
378 AGGGGTGGGACGCACAATCCGGGGATCGATCGGGTCCCTCTCTACGTGCTGCCGATCTTGCTGCC
21965062 GCAACCCTCGGTCTGGTCTGATCTTAAATTGGAAATGAACTCCATTTGCCTAAACCGACCAACGA
443 GCAACCCTCGGTCTGGTCTGATCTTAAATTGGAAATGAACTCCATTTGCCTAAACCGACCAACGA
21965127 AACGAGCGGGCGGGCACTACGTCGGCCAGAGAGACGTGATACGCAAGCTGTGGTTCGATAGGGTG
508 AACGAGCGGGCGGGCACTACGTCGGCCAGAGAGACGTGATACGCAAGCTGTGGTTCGATAGGGTG
21965192 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATCCCATTTTAATGGCTTGTAAATT
573 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATCCCATTTTAATGGCTTGTAAATT
*
21965257 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCACTTTCTATTTTTC
638 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTC
* * *
21965322 ACGATTTTCT-AAACTTTTTATGGTTCGTGATTTTTGAAAATTTTTTCGAAAGGGGTTTTGGCCC
703 ACGATTTT-TGAAACTTTTTATGGTTTGAGATTTTTTAAAATTTTTTCGAAA-GGGTTTTGGCCC
21965386 CAAACTTGGT
766 CAAACTTGGT
*
21965396 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCTTTAATGGGGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAG
*
21965461 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCTTCGTACAT
65 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG--CA-
* * *
21965526 CATGTGTGCACACCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT-TCC--G
127 CA----T--ACACCACCGCCCGCCCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGTG
* * * *
21965588 ATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGGCACCAGCACAT-CCCAAGCCCAGCATG
186 ATGATCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATG
*
21965652 TGCTGCCGCAACCCCCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
251 TGCTGCCGCAACCCCCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
21965717 GAATGAACTACGTATGCCTAAGTCAACCCACAAAACGAGTGTGCGACCGCTCAGCTGGCCAGAGG
316 GAATGAACTACGTATGCCTAAGTCAACCCACAAAACGAGTGTGCGACCGCTCAGCTGGCCAGAGG
21965782 GGTGGGACGCACAATCCGGGGATCGATCGGGTCCCTCTCTACGTGCTGCCGATCTTGCTGCCGCA
381 GGTGGGACGCACAATCCGGGGATCGATCGGGTCCCTCTCTACGTGCTGCCGATCTTGCTGCCGCA
*
21965847 ACCCTTGGTCTGGTCTGATCTTAAATTGGAAATGAACTCCATTTGCCTAAACCGACCAACGAAAC
446 ACCCTCGGTCTGGTCTGATCTTAAATTGGAAATGAACTCCATTTGCCTAAACCGACCAACGAAAC
21965912 GAGCGGGCGGGCACTACGTCGGCCAGAGAGACGTGATACGCAAGCTGTGGTTCGATAGGGTGGTA
511 GAGCGGGCGGGCACTACGTCGGCCAGAGAGACGTGATACGCAAGCTGTGGTTCGATAGGGTGGTA
21965977 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATCCCATTTTAATGGCTTGTAAATTCAT
576 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATCCCATTTTAATGGCTTGTAAATTCAT
21966042 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACG
641 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACG
* * *
21966107 ATTTTTGAAACATTTTATAGTTTGAGATTTTTTAAAATTTTTTC-AGAAGGGTTTTGACCCCAAA
706 ATTTTTGAAACTTTTTATGGTTTGAGATTTTTTAAAATTTTTTCGA-AAGGGTTTTGGCCCCAAA
21966171 CTTGGT
770 CTTGGT
** *
21966177 AGATGCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGTGTGTGAG
1 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-GTGTGAG
*
21966242 TTCTCGAGGTTTTG-TGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCATCCATCGCACA
65 TTCTCGAGG-TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
21966305 -AC-CCTCGGCCCGCCCGATCGCTAGAACCCCAATGCCGCCGGTCAAGTTCTCCGATGATGATCC
129 TACACCACCGCCCGCCCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGATCC
* * * * *
21966368 GGCGGTAGTGCCCC-ACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCT
193 GGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCC
* * * * **
21966432 GCAACCCTCGGTCCGGTCCGATCTTTGATTGGGAATGAACTCCATATGCTTAGACTGGGAATGAA
258 GCAACCCCCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
* * * ** * * * * * *
21966497 CT-CTGTATACCTAAGTCAACACACGAAACGAACGTGCGATCGCTCAACCGACCAGAAGGGCGGG
323 CTAC-GTATGCCTAAGTCAACCCACAAAACGAGTGTGCGACCGCTCAGCTGGCCAGAGGGGTGGG
* ** * * * * * * * * *
21966561 ATGTGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTGTCGCAACCCTC
387 ACGCACAATCCGGGGATCGATCGGGTCCCTCTCTACGTGCTGCCGATCTTGCTGCCGCAACCCTC
** * * * * * * *
21966626 GGTCCAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACTGACGAAACGAGCGG
452 GGTCTGGTCTGATCTTAAATTGGAAATGAACTCCATTTGCCT-A---AACCGAC-CAACGA---A
* * * * * *
21966691 GCGAGAAGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGG
509 AC--G-A-GCGGGCGGGCACTACGTCGGCCAGAGAGACGTGATACGCAAGCTGTGGTTCGATAGG
* *
21966756 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
570 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATCCCATTTTAATGGCTTGTAA
* **
21966821 ATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTGGTTTTCTATTT
635 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTT
* ** * *
21966886 TTCATGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTTGGC
700 TTCACGATTTTTGAAACTTTTTATGGTTTGAGATTTTTTAAAATTTTTTC-GAAAGGGTTTTGGC
*
21966951 CCCAAACTTAGT
764 CCCAAACTTGGT
21966963 AGACA
1 AGACA
21966968 TGATCATTGT
Statistics
Matches: 1424, Mismatches: 114, Indels: 70
0.89 0.07 0.04
Matches are distributed among these distances:
769 40 0.03
770 5 0.00
772 25 0.02
773 235 0.17
774 1 0.00
777 8 0.01
778 7 0.00
780 37 0.03
781 99 0.07
782 505 0.35
783 42 0.03
784 1 0.00
785 221 0.16
786 27 0.02
787 35 0.02
788 52 0.04
789 69 0.05
791 2 0.00
792 8 0.01
793 2 0.00
796 1 0.00
797 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (775 bp):
AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATA
CACCACCGCCCGCCCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGTGATGATCCGGC
GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCA
ACCCCCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTA
CGTATGCCTAAGTCAACCCACAAAACGAGTGTGCGACCGCTCAGCTGGCCAGAGGGGTGGGACGC
ACAATCCGGGGATCGATCGGGTCCCTCTCTACGTGCTGCCGATCTTGCTGCCGCAACCCTCGGTC
TGGTCTGATCTTAAATTGGAAATGAACTCCATTTGCCTAAACCGACCAACGAAACGAGCGGGCGG
GCACTACGTCGGCCAGAGAGACGTGATACGCAAGCTGTGGTTCGATAGGGTGGTAGGTGGGTTTA
GGCACATCTTCATATTTCTGCATGCCAATCCCATTTTAATGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAA
CTTTTTATGGTTTGAGATTTTTTAAAATTTTTTCGAAAGGGTTTTGGCCCCAAACTTGGT
Found at i:21968060 original size:902 final size:896
Alignment explanation
Indices: 21966182--21970945 Score: 5930
Period size: 902 Copynumber: 5.3 Consensus size: 896
21966172 TTGGTAGATG
* *
21966182 CTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTC
1 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
21966247 GAGGTTTTG-TGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAG----CAT----C--CA--
66 GAGG-TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * ** * *
21966298 T-CGCACAACCCTCGGCCCGCCCGATCGCTAGAACCCCAATGCCGCCGGTCAAGTTCTCCGATGA
130 TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
* * * * * *
21966362 TGATCCGGCGGTAGTGCCCC-ACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGT
195 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGT
* * *
21966426 GCTG-CTGCAACCCTCGGTCCGGTCCGATCTTTGATTGGGAATGAACTCCATATGCTTAGACTGG
260 GCTGTC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * ** * *
21966490 GAATGAACTCTGTATACCTAAGTCAACACACGAAACGAACGTGCGATCGCTCAACCGACCAGAAG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* *
21966555 GGCGGGATGTGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTGTCGCA
389 GGCGGGATGCGCAAGC-GGGGATCGGTCGGGT-CCCCTCTGCGTGCTGTCGATCCTACTG-CTCA
* * ** * *
21966620 ACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACTGACGAAAC
451 ACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* ** *
21966685 GAGCGGGCGAGAAGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATC
516 GA--GGGCGGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
21966750 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
579 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
*
21966815 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-ATGAAGTTTCATGGCAAGACGACTGGTTT
644 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGA-GAAGTTTCATGGCAAGACGACTCGTTT
* *
21966879 TCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGAG
708 TCTATTTTTCATGATTTTCGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGAG
* * * * * * *
21966944 TTTTGGCCCCAAACTTAGTAGACATGATCATTGTATTTTTTTTCGCTTGAACAAAAAAATTCAGC
773 -TTTGGCCCCAAACGTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGC
*
21967009 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACA
836 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
21967070 CTTTAATGGCTACTCGCAGCAAACCTGTAAAATCTCAACTGCTCTTTAAGGGGGTGTGGGTTCTC
1 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
**
21967135 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-CACATCACCT
66 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
** * * *
21967199 GCGCACACCTCCCCGGCCCCCCCGATCATCGGAACCACAATGCCGCCGGTCAGGTTCTTCGGCGA
131 GCGCACACC-CCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
* * *
21967264 TGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCTAGCATGT
195 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGT
* * * *
21967329 GCTG-CAGCAACCCTCGGTTCAGTCCGATCTTCGACTGGGAATGAACTCCGTAAGCTTAGACTGG
260 GCTGTC-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
21967393 GAATAAACTCCGTAGGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGACCAGAGG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGG
* * * * * * * * * **
21967458 GGTGAGATGCGCAAGTCGGTGATCAGTCGGGTCCCCACTGCATGCTGTCGATCTTGCTACCTTTA
389 GGCGGGATGCGCAAG-CGGGGATCGGTCGGGTCCCCTCTGCGTGCTGTCGATCCTACT-GCTCAA
*
21967523 CCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
452 CCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* *
21967588 AGTGGACGGGTGGGCAGGCGGGCACTGCGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
517 AG-GG-CGGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * *
21967653 ATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCTACATGCCAATGCTATTTTTATGGCT
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* * *
21967718 TGTAAATTCAGACAATGGTCCCTTAAGCCTTCACGAGGAGTTTCATGGCAAGACGACCCGTTTTC
645 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGAGAAGTTTCATGGCAAGACGACTCGTTTTC
* **
21967783 TATTTTTCATGATTTTCAAAACTTTTTAAAGTTTGGGCATTTTTTTAAAA-TTTTTCGGACAAGA
710 TATTTTTCATGATTTTCGAAACTTTTTACGGTTTGGG-A-TTTTTTAAAATTTTTTCGGA-AAGA
* * *
21967847 GTTTGGCCCCGAA-GTGGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAGTTCAGG
772 GTTTGGCCCCAAACGTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-TTCA-G
21967911 CT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCACTTTCAGACA
835 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTTCAGACA
*
21967972 CTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
1 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
21968037 GAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGT
66 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
** * * * *
21968102 GCGTGCACCCCACTGGCCCCCCCGATCGCTGGAACACCAATGCCACCGGTCAGGTTCTCCGTA--
131 GCGCACACCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-ACG
* *
21968165 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACTC-GCACTTGCCCGAGCCCAGCAT
194 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCAC-CAGCACATGCCCAAGCCCAGCAT
* * * * *
21968229 GTGCTGTCGCAACCCTCGGTCTGGTCCAATCTTAGATTGGGAATGAAGTCCATATGCTTAGACTG
258 GTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * * * *
21968294 GGAACGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCAGGCGCTCAGCCGGCCAGAA
323 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAG
* ** * * * * * *
21968359 TGGCAAGATGCGCAAGCCAGCGATCGGTCGGGTCCCTCTCTACGTGCTAG-CAATCTTGCTGCTG
388 GGGCGGGATGCGCAAG-CGGGGATCGGTCGGGTCCC-CTCTGCGTGCT-GTCGATCCTACTGCT-
* * *** * * * * *
21968423 GAACCCTCGATCTGGTGTGATCTTAGATTGTGAATAAACTCCGTATACCTAAGCCAATCGACGAA
449 CAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
*** * * *
21968488 ACGA--GCGAACGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGGTACGCAAGCCGTGGATC
514 ACGAGGGCGGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
21968551 GATAGGGTGGTATGTTGGTTTAGGCACATCTTCATATTTATGCATGCCAATGCCATTTTTATGGC
579 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* *
21968616 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTT
644 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGAGAAGTTTCATGGCAAGACGACTCGTTTT
* * * *
21968681 CTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCT-AGATTTTTTAAAATTTTTTCGGAAGGAA
709 CTATTTTTCATGATTTTCGAAACTTTTTACGGTT-TGGGATTTTTTAAAATTTTTTCGGAAAG-A
* * * * * * *
21968745 TTTTAGCCTCGAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC
772 GTTTGGCCCCAAACGTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAATTCAGC
* * * * * *
21968810 CAAAAATTCGAAATGTACCAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTTC-GAAAA
836 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACA
* * *
21968871 TTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTT
1 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
21968936 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATTGCACATCATGT
66 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* ** * *
21969001 GCACACATCCCCCTCGG-CCCCCCGATCGCCAAAACCCCAATGCCGCCGGTCAGATTCTCCGGCG
131 GCGCACA-CCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
** *
21969065 ATGCTCCGGCGATGGTGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCTAAGCCCAGCATG
194 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATG
* * * *
21969130 TGCTGCCACAACCCTCGGTCCGGTCGGATCGTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
259 TGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * *
21969195 GAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCCCTCAGTAC-ACCAGAG
324 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGACCAGAG
* * * *
21969259 GGGCGGGATGCGCAAGCCGGGGATTGGCCGGGTCCCCTCTGTGTGCTGCCGATCCTACTGCTGCA
388 GGGCGGGATGCGCAAG-CGGGGATCGGTCGGGTCCCCTCTGCGTGCTGTCGATCCTACTGCT-CA
* * ** *
21969324 ACCCTCTATCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATGGATGAAAC
451 ACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * *
21969389 GA--GCGGGTGGGCGGGCGGGCACTACG-CTGGCCAAAGAAACAGGATGCGCAAGCCGTGGATCG
516 GAGGGCGGGTGGGCGGGCGGGCACTACGTC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * * * * *
21969451 ATAGGGTGCTAGGTGGGTTTAGGCACCTCTTCATATTTCTACGTCCCAATTCCATTTTTATGGCT
580 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* *
21969516 TGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-ATGAAGTTTCACGGCAAGATGACTCG-TTT
645 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGA-GAAGTTTCATGGCAAGACGACTCGTTTT
* ** * *
21969579 CTATTTTTCATGATTTTCGAAACTTTTTACAGTTCAGGACTTTTTAAAATTTTTTCGGAAAGACT
709 CTATTTTTCATGATTTTCGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGA-G
* * *
21969644 TTTGGCCCCAAGCTTGGTCGACATGATCCTTGTATTTTT-TTGGCATGCACAAAAACATTCAGCT
773 TTTGGCCCCAAACGTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAA-ATTCAGCT
21969708 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
837 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
21969768 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTT
1 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* *
21969833 GAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGT
66 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * *
21969898 GCGCACACCCCCTCTG-CCCCCCGATCGCCGAAACCCCAATGCCGCCAGTCAGGTTCTCCGACTA
131 GCGCACACCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
* * *
21969962 TGCTCCTGCGATGGTGCCCCAACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
195 TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGT
* * *
21970027 GCTGTCGCAACCCTCGGTCTGGTCCTATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGG
260 GCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * *
21970092 -ATGAACTCCGTATGTCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGG
325 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGG
* * * * *
21970156 GCGGGA-GCGCAAGCTGAGGATC-GACGGGT-CCCTGT-CATG--GT--A--CT-C--CACAACC
390 GCGGGATGCGCAAGC-GGGGATCGGTCGGGTCCCCTCTGCGTGCTGTCGATCCTACTGCTCAACC
* **
21970208 C-CGAT-CGGTCCAATCTTAGACTTGGAATG---T-TATATG-C-AAGCC-ACC-A--AAACGAG
454 CTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
** ** * *** ** *
21970261 GG-GCAT--GC-GG-ATGCACTACGCTC--CTAGAGAGGTAGGATGCGCAA--AATGAATCGATA
519 GGCGGGTGGGCGGGCGGGCACTACG-TCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
* *
21970317 GGGT-G-AGTTTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT-GCTTT
583 GGGTGGTAG-GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC-TT
* * *
21970379 GTAAATTCATTACAAATGGTGCCCTTAAAGCCTTCACGTGAAG-TTCATGGTAAGACGACTC-AT
646 GTAAATTCA-TAC-AATGGT-CCCTT-AAGCCTTCACGAGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
21970442 TTCTATTTTTCACGATTTT-GAAACTTTTTACGGTTCGAGATTTCTTAAAATTTTTTCGGAAGGA
707 TTCTATTTTTCATGATTTTCGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGA
* *
21970506 GTTTTGGCCCCAAACGTTGTAGACATGATCCTCGTATTTTTGTTGGCATGCACAAAAACATTCAG
772 G-TTTGGCCCCAAACGTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAA-ATTCAG
* * * *
21970571 CTAAAAAATTGAAGTGTAGAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAGACA
835 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
*
21970633 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCTC
1 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * *
21970698 GAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCACACATCATGT
66 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * *
21970763 GCGCACACCCCCTGGCCCCCCCGATCGTCGTAACCCCAATGCCGTCGGTCAGGTTCTCCGACGAT
131 GCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * ** *
21970828 GCTCCAGCGATGGTGCCCCGACGATGAAAAATACGTCACCAGCACATGCCTGAGGCCAGCATGTG
196 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTG
** * * * *
21970893 CTACCGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAAAGAACTCCGTATG
261 CTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
21970946 TCTAAGCCAA
Statistics
Matches: 3388, Mismatches: 415, Indels: 169
0.85 0.10 0.04
Matches are distributed among these distances:
861 4 0.00
862 55 0.02
863 16 0.00
864 80 0.02
865 418 0.12
866 22 0.01
867 2 0.00
868 3 0.00
869 6 0.00
870 2 0.00
871 2 0.00
872 1 0.00
873 5 0.00
874 1 0.00
875 4 0.00
876 1 0.00
879 22 0.01
880 3 0.00
881 6 0.00
882 1 0.00
884 1 0.00
885 2 0.00
887 5 0.00
888 73 0.02
889 28 0.01
891 2 0.00
892 5 0.00
893 10 0.00
894 13 0.00
895 62 0.02
896 174 0.05
897 213 0.06
898 120 0.04
899 689 0.20
900 216 0.06
901 20 0.01
902 752 0.22
903 332 0.10
904 17 0.01
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (896 bp):
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
GCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCCCAGCATGTG
CTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGG
CGGGATGCGCAAGCGGGGATCGGTCGGGTCCCCTCTGCGTGCTGTCGATCCTACTGCTCAACCCT
CGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGG
CGGGTGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
TTCATACAATGGTCCCTTAAGCCTTCACGAGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
TCATGATTTTCGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAAGAGTTTGGCCC
CAAACGTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
Found at i:21968289 original size:26 final size:26
Alignment explanation
Indices: 21968252--21968311 Score: 79
Period size: 26 Copynumber: 2.4 Consensus size: 26
21968242 CCTCGGTCTG
* *
21968252 GTCCA-AT-CTTAGATTGGGAATGAA
1 GTCCATATGCTTAGACTGGGAACGAA
21968276 GTCCATATGCTTAGACTGGGAACGAA
1 GTCCATATGCTTAGACTGGGAACGAA
*
21968302 CTCCATATGC
1 GTCCATATGC
21968312 CTAAGTCAAC
Statistics
Matches: 31, Mismatches: 3, Indels: 2
0.86 0.08 0.06
Matches are distributed among these distances:
24 5 0.16
25 2 0.06
26 24 0.77
ACGTcount: A:0.30, C:0.20, G:0.23, T:0.27
Consensus pattern (26 bp):
GTCCATATGCTTAGACTGGGAACGAA
Found at i:21969190 original size:26 final size:26
Alignment explanation
Indices: 21969161--21969211 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
21969151 GGTCGGATCG
21969161 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
*
21969187 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
21969212 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:21970104 original size:25 final size:26
Alignment explanation
Indices: 21970055--21970105 Score: 86
Period size: 25 Copynumber: 2.0 Consensus size: 26
21970045 CTGGTCCTAT
*
21970055 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21970081 CTTAGACTGGG-ATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21970106 TCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
25 13 0.54
26 11 0.46
ACGTcount: A:0.25, C:0.18, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21972566 original size:26 final size:26
Alignment explanation
Indices: 21972527--21972577 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
21972517 CTGGTCCATT
*
21972527 CTTAGACTGAGAATGAATTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
*
21972553 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGAGAATGAACTCCGTAT
21972578 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:21975653 original size:903 final size:899
Alignment explanation
Indices: 21970918--21977230 Score: 8027
Period size: 903 Copynumber: 7.1 Consensus size: 899
21970908 GTCCAGTCTG
* * * *
21970918 ATCTTAGACTGGGAAAGAACTCCGTATGTCTAAGCCAACCGACGAAAC--G-A-GTGGGAGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* **
21970979 GGTGGTAACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
66 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
21971044 GCTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAAT
131 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
21971109 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * *
21971174 TG-AAACTTTTTGCGGTTCGGGATTTTTT-AAATTTTTTTGGAAGGAGTATTGGCCCCAAACTTG
261 TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTG
* * *
21971237 GTAGACGTGATCCTTGTATTTTTGTTAGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTA
326 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * * *
21971302 CAAGATTTTGTGACCATTTGAAAAAAATGTCCGCATTTCAGACACTTTAATAGCTACTGACAGCA
391 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
21971367 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGG
456 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
* * *
21971432 GGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTAACCGCACCCCCTCCCCCGGC
521 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT--GCGCA--CAC-CCCCCGGC
* * * *
21971497 ACCCCGATCGTTGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCC
581 CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-GAGATGCTCC-G-GATGGTGCC
* ** *
21971562 CCGACGAAGAAAAATGTAGCACCAGCACATGCCCTAGCCCAGCATGTGCTGCCGCAA-CC-C--T
643 CCTACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
21971623 -CGGT-C---C----A---G--T----T-CG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTA
708 CCGGTCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
21971667 AGTCATCCCACGAAAATGAGCGTGCAGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGG
773 AGTCAACCCACG-AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * * ** ** *
21971732 GGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTACTACTGCAACCCTCTATCTGATCCA
837 GGATCGGCCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
* *
21971795 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCTGGCGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* * * *
21971860 GGTGGGCACTACG-TGAGCCAGGGAGACAGGATG-GCAAGCCGTGGATCGATAGGGTGGTAGGTG
66 GGCGGGCACTACGCCG-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
21971923 GGTTTAGGCACATCTTCATATTTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
130 GGTTTAGGCACATCTTCATA-TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* *
21971988 AGTGGTCCCTTAAACCTTCACTGTGAAG-TTCATGGCAAGCACGACTTCGTTTCCTATTTCTTCA
194 A-TGGTCCCTTAAGCCTTCAC-GTGAAGTTTCATGGCAAG-ACGAC-TCGTTTTCTATTT-TTCA
* * *
21972052 TGATTTTTGAAAACTTTTTACGGTTCAGGGATTTTTTAAAATTTTTTTCGAAAGGACTTTTGG-C
254 CGATTTTTGAAAACTTTTTGCGGTTC-GGGATTTTTTAAAA-TTTTTTCGAAAGGAGTTTTGGCC
* * * *
21972116 ACAAACTTGTTACAACGTGATCCCTTGTATTTTTGTTGGGCATGCACAACAAAAATTCAGCTAAA
317 CCAAACTTGGTA-GACGTGAT-CCTTGTATTTTT-TTTGGCATGCACAA-AAAAATTCAGCTAAA
* * * **
21972181 AACTCAAAGTGTACAAGATTTTGTTACCATTTAAAAAACAGTGTCCTTATTTCAGACACTTTAAT
378 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA-AGTGTCCCCATTTCAGACACTTTAAT
* *
21972246 GGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTT
442 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
21972311 GATGAGGGATAAGTGGCCAACTATAAAGGGCCAAGTTACCAGCA-CTAT-GCACA-CATGTGCGC
507 GATGAGGGATAAGGGGCCAA-TAT-AAGGGCCAAG-TACCAGCACCCATCGCACATCATGTGCGC
* * * *
21972373 ACACCCCCCCCGGTCCCCCGATCGCCGGAACCCCAATGCCATCAGTCAGGTTCTCCGACGATGCT
569 ACA--CCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-GATGCT
* * *
21972438 CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCACCACATGCCCGAGCGCAGCATGTGCTG
631 CCG--GATGGTGCCCCTACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * *
21972503 CCTCAACCCTCGGTCTGGTCC-ATTCTTAGACTGAGAATGAATTCCGTATGCTTAGACTGGGAAT
694 CCGCAACCCTCGGTCCGGTCCGA-TCTTAGACTG-GAATGAACTCCGTATGCTTAGACTGGGAAT
* * *
21972567 GAACTCCGTAT-CCTAAGTCAACCAACGAAACGAG-GTGCGGGCCCTCAGTCGGCCAGAGGGGCG
757 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCG
* * ** *
21972630 GGATGCGAAAGTCGGGGATCGATCGAGT---CC-C--CGT-C--T-G----T-C-G---CAACCC
822 GGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCC
*
21972676 TCGGTCTGGTCCG
887 TCGGTCTGGTCCA
* * *
21972689 ATCTTACACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAC--G-A---------GCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* * *
21972742 GGCGGGCACAACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTATGTGG
66 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *** ** *
21972807 GTTTAGGCAAATCTTCATATTTCTATGTGCCAATGAAATTTTTATGGCCTGTAAATTCATACAAT
131 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
21972872 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTAACGATTTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * **
21972937 TG-AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC-AGAAGGAGTTTTGGTGCCAAACTT
261 TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTT
* *
21973000 GGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAATTCGAAGTG
325 GGTAGACGTGATCCTTGTA-TTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * * * *
21973065 TACAAGATTTTGTGGCAATTTGAAAAAA-TGTCCGCATTTCAGACGCTTTAGTGGCTACTGGCAG
389 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
21973129 CAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-A
454 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAA
* * *
21973193 GGGGACCAATATAAGGGCTAAGTACCCGTACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
519 GGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CC
* *
21973258 CCCCGATCGTCAGAACCCCAATGCCGTCGGTCAGGTTCTCC--G--G---C-GATGGTGGCCC-A
582 CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAGATGCTCCGGATGGTGCCCCTA
* *
21973314 GCGAAGAAAAATGCGG-ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTTCG
647 -CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCG
** * *
21973378 GTTTGATCTTAGACTGGGAATGAACTCCGTTTGCTTAGACTGGGAACGAACTCAC-TATGCCTAA
711 GTCCGATCTTAGACT-GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC-CGTATGCCTAA
* * * *
21973442 GTCAACCCACGAAATGAGCGTACGGGCGTTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGG
774 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * * * *
21973507 ATCGGCCGGGTCCCCCTCTACGTGCTATTGATCCTGCTACCACAACCCTCCGTCCGATCCG
839 ATCGGCCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
* * * ** *
21973568 ATCTTAGACTGGGAATGATCTCTGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCTGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* * * * * *
21973633 GGTGGGCACTACACCGGCTAGAGAGACAGGATGTGCAAGCCATGGATCGATAGGGTGGTAGGTGG
66 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
21973698 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATACAATTTTTATGGCTTGTAAATTCATAAAAT
131 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
21973763 GGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCGAGATGACTCGTTTTCTGTTTTTCACGATTTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
21973828 T-AAAACTTTTTGAGGTTTGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTAGCCCCAAACTGG
261 TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTG
* * *
21973892 GTAGATGTGATCCTTGTATTTTTGTTGGCATGCACCAAAAAATTCAGCTAAAAACTCGAAGTGTA
326 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
** * * *
21973957 CAAGATTTTGTGACCATTTGAAAAAAGTACCCCCATTTAAGACATTTTAATGGCTACTGGCAACA
391 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * * *
21974022 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCAAGATTTGATAAGGGATAGGG
456 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
* * *
21974087 GGCCAATATAAGGGCCATGTACCAGCACCCATCGCAAATCATGTGCGCACACCCCCCCGGCCCCT
521 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCC
* *
21974152 CGATCGAT-GGAACCCCAATGCCGCCGGTCAGGTTCTCC--G--G---C-AATGGTG-CCCTGAC
585 CGATCG-TCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAGATGCTCCGGATGGTGCCCCT-AC
* * * * *
21974207 GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGTATGTGCTACCGCAACCGTCAGTCCGGT
648 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* *
21974272 CCGATCTTAGACTGGGATGGAACTCCGTATTCTTAGACTGGGAATGAACAT-CGTATGCCTAAGT
713 CCGATCTTAGACTGGAAT-GAACTCCGTATGCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGT
* *
21974336 CAACCCACGAAACGCGCGTGCGGGCGGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCGG
776 CAACCCACGAAACGAGCGT----GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * * * *
21974401 GGATCGACCGGGTCCCCCTTTGCGTGTTGA-CGATCCTACTGCCATAACCCTCAGTCTGGTTCA
837 GGATCGGCCGGGTCCCCCTCTGCGTGCT-ATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
* * *
21974464 ATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAATGA--A------CGGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* *
21974521 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAGCCGTTGATCGATAGGGTGGTAGGTGG
66 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
21974586 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
131 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
21974651 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* ** *** * *
21974715 TCAAAACTTTTTGCGGTTTAGGATTTTTTAAAATTTTTTCGGGGGGAGTCTTGGCCCCAAAATTG
261 TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTG
* *
21974780 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTTGAAGTGTA
326 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * *
21974845 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTGCAGACACTTTAATTGCTACTGGGAGCA
391 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
21974910 AACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
456 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
21974975 GGCCAATATAAGGGCCAAGTACCAGCACCCATCG-ACATCATGTGCGCACACCCCCCCTGGCCCC
521 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GG-CCC
**
21975039 CCCGATCAACGGAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGGGAATGGTGCCCC
583 CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-GATGCTCC-GG-ATGGTGCCCC
*
21975104 TACGAAGAAAAATGCGGGACCCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
645 TACGAAGAAAAATGCGGCA-CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * * *
21975169 CAGTCTGATCTTAGATTGGAATGAACTCCGTATGCTTAGACAGGGAATGCACTCCGTATGCCTAA
709 CGGTCCGATCTTAGACTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * **
21975234 GTCAACCCACGAAACAAGCGTGCTGGCGCTCAGTCGACCA-AAGGGCGAGATGCGCAAGCCATGG
774 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * ** * * *
21975298 ATCGGCCAGGTCCCCCTCTGCGTGCTATCAATTTTGCTGTCGCAACCCTCGGTCTAGTCCA
839 ATCGGCCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
* * * *
21975359 ATCTTAGACCGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCATGCGGGCGGGTG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* * * *
21975424 GGCGGGCACTACGTCGGCTAGAGAGACGTGATGCGCAAGCCGTGGATCGATAGGGTAGTAGGTGG
66 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *
21975489 GTTTAGGCACATCTTCATATTTCTGCATGCCACTGCCATTTTTATGGCTTGTAAATTCATACAAC
131 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
21975554 AGTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAGACGACTCGTTTTCTATTTTTTACGATTTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * *
21975619 TGAAAA-TTTTTGTGGTTCGGGATTTTTTAAAATTTTTTCAAAAGGATTTTTAGCCCTAAACTTG
261 TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTG
* *
21975683 GTAGATGTGATCCTTGTATTTTTTTT-GAATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
326 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
*
21975747 CAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
391 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * * *
21975812 AACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGTTCTCGGGGTTTGGTGAAGGATAGGG
456 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
* * * * *
21975877 GGCCAATATGAGGGCCAAGTACCAGCAACCATCGCACATAATATGCACACACCCCCCGGCCCCCC
521 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* *
21975942 GATCGTCGGAACCCTAATGCTGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTG-CCCTAA
586 GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA-GATGCTCCG--GATGGTGCCCCT-A
*
21976006 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGG
647 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* * *
21976071 TCCGATCTTAGACTGAAAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGT
712 TCCGATCTTAGACTG-GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* *
21976136 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGTCGGGGAT
776 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * *
21976201 CGGCCGGGTCCCCCTCTGTGTGCTGTCAATCCTGCTGCCACAACCCTCGATCCGGTCCT
841 CGGCCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
* * *** * * * *
21976260 ATCTTAGACTGGGAATGAACTTCGTATTCCTAAGCCAATTAACGAAACAAGCGGGTGGGCGGGCA
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
* ** * * *
21976325 AGCTTGCACTACGCCGGGCAAAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGG
66 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
21976390 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCTTTTTTATGGCTTGTAAATTCATAGAAT
131 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
21976455 GGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTGTTTTTCATGATTTT
196 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * *
21976520 TG-AAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGTCCCAAAATTG
261 TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTG
* * * * *
21976584 GAAGACGTGATCCTTTTATTTTTGTTGGTATGCACAAAAAAATTCATCTAAAAACTCGAAGTGTA
326 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
21976649 CATGATTTTGTGACCATTTGAAAAATA-TGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGC
391 CAAGATTTTGTGACCATTTGAAAAA-AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * * *
21976713 AAACCTGTAAAATCTCGAATGCTCTTTAGGGGGGTGTGAGTTCTCGATGTTTGATGAGGGATAGG
455 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAG
** *
21976778 GGGCCAATATAAGGGCCAAGTATGAGCACCCATCGCACATCAAGTGCGCACACCCCCCGGCCCCC
520 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
* * ** *
21976843 TCGATCGTCGGAACCCCAATGCTGTCGGTCAGGTTCTCCGGTGATGCTCCAACAATGGTGCCTC-
585 -CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-GAGATGCTCC--GGATGGTGCCCCT
* *
21976907 ATTGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
646 A-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
*
21976972 GGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
710 GGTCCGATCTTAGACT-GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
21977037 GTTAACACATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGG
774 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * * * **
21977102 ATCGACCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGTCATAACCCTCGGTCCGGTCTT
839 ATCGGCCGGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
* * * *
21977163 ATCTTAGACTGGGAATGAACTCCGTATGCCTAACCCAACCGACGATACGAGCGGGCGGGCAGGCG
1 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
21977228 GGC
66 GGC
21977231 ACTAGCCGGC
Statistics
Matches: 4739, Mismatches: 535, Indels: 298
0.85 0.10 0.05
Matches are distributed among these distances:
858 91 0.02
859 49 0.01
860 47 0.01
862 1 0.00
863 2 0.00
864 1 0.00
865 1 0.00
866 3 0.00
867 2 0.00
868 6 0.00
869 21 0.00
870 51 0.01
871 108 0.02
872 1 0.00
873 47 0.01
874 21 0.00
875 31 0.01
876 23 0.00
877 61 0.01
878 11 0.00
879 72 0.02
880 61 0.01
881 108 0.02
882 97 0.02
883 61 0.01
884 12 0.00
885 12 0.00
886 15 0.00
887 36 0.01
888 460 0.10
889 65 0.01
890 194 0.04
891 460 0.10
892 178 0.04
893 109 0.02
894 72 0.02
895 126 0.03
896 153 0.03
897 3 0.00
898 1 0.00
899 67 0.01
900 232 0.05
901 432 0.09
902 404 0.09
903 611 0.13
904 13 0.00
906 1 0.00
907 3 0.00
909 2 0.00
910 2 0.00
913 50 0.01
914 8 0.00
915 16 0.00
916 25 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCG
GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
TGAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTG
GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGG
GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAGATGCTCCGGATGGTGCCCCTACGAA
GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
ATCTTAGACTGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCC
GGGTCCCCCTCTGCGTGCTATCGATCCTGCTGCCACAACCCTCGGTCTGGTCCA
Found at i:21976106 original size:26 final size:26
Alignment explanation
Indices: 21976077--21976129 Score: 72
Period size: 26 Copynumber: 2.0 Consensus size: 26
21976067 CCGGTCCGAT
21976077 CTTAGACT-GAAAATGAACTCCGTATG
1 CTTAGACTAG-AAATGAACTCCGTATG
* *
21976103 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGAAATGAACTCCGTATG
21976129 C
1 C
21976130 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.32, C:0.19, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGAAATGAACTCCGTATG
Found at i:21977016 original size:26 final size:26
Alignment explanation
Indices: 21976980--21977032 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21976970 CCGGTCCGAT
21976980 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21977006 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
21977032 C
1 C
21977033 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21977291 original size:166 final size:167
Alignment explanation
Indices: 21977058--21977394 Score: 403
Period size: 166 Copynumber: 2.0 Consensus size: 167
21977048 AAACGAGCGT
* * **
21977058 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGC
1 GCGGGCACTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCGACGATCGACCGGGTCCCCCTCTGC
* ** * * ** * *
21977123 ATGCT-GTCGATCCTGCTGTCATAACCCTCGGTCCGGTCTTATCTTAGACTGGGAATGAACTCCG
66 ATGCTACT-GATCCTGCTACCACAACCCCCAATCCGGTCTGATCTTAGACTAGGAATGAACTCCG
* *
21977187 TATGCCTAACCCAACCGACGATACGAGCGGGCGGGCAG
130 TATGCCTAACCCAACCGACGAAACAAGCGGGCGGGCAG
* *
21977225 GCGGGCACT-AGCCGGCCCA-AGGGGCGAGATGCGCAAG-CTGACGATTGGCCGGGTCCCCCTCT
1 GCGGGCACTCAGCCGG-CCAGAGGGGCGAGATGCGCAAGTC-GACGATCGACCGGGTCCCCCTCT
* **
21977287 GCATGCTACTGATCCTGCTACCGCAACCCCCAATCTTGTCTGATCTTAGACTAGGAATGAACTCC
64 GCATGCTACTGATCCTGCTACCACAACCCCCAATCCGGTCTGATCTTAGACTAGGAATGAACTCC
* * * *
21977352 GTATGCCTAAGCCGACCGACGAAACAAGTGGGCGGGCGG
129 GTATGCCTAACCCAACCGACGAAACAAGCGGGCGGGCAG
21977391 GCGG
1 GCGG
21977395 ACGGAAACTA
Statistics
Matches: 143, Mismatches: 24, Indels: 7
0.82 0.14 0.04
Matches are distributed among these distances:
165 1 0.01
166 130 0.91
167 12 0.08
ACGTcount: A:0.20, C:0.31, G:0.32, T:0.18
Consensus pattern (167 bp):
GCGGGCACTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCGACGATCGACCGGGTCCCCCTCTGC
ATGCTACTGATCCTGCTACCACAACCCCCAATCCGGTCTGATCTTAGACTAGGAATGAACTCCGT
ATGCCTAACCCAACCGACGAAACAAGCGGGCGGGCAG
Found at i:21978075 original size:26 final size:26
Alignment explanation
Indices: 21978039--21978091 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21978029 CTGGTTCGAT
21978039 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21978065 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
21978091 C
1 C
21978092 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21980699 original size:26 final size:26
Alignment explanation
Indices: 21980659--21980711 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
21980649 GTGGTCCAAT
*
21980659 CTTAGACTGGGAATGAACT-CTGTATG
1 CTTAGACTGGAAATGAACTAC-GTATG
21980685 CTTAGACTGGAAATGAACTACGTATG
1 CTTAGACTGGAAATGAACTACGTATG
21980711 C
1 C
21980712 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTACGTATG
Found at i:21981578 original size:26 final size:26
Alignment explanation
Indices: 21981549--21981599 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
21981539 CCAGTCCGAT
21981549 CTTAGAATGCGAATGAACTCCGTATA
1 CTTAGAATGCGAATGAACTCCGTATA
* *
21981575 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGAATGCGAATGAACTCCGTAT
21981600 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.20, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGAATGCGAATGAACTCCGTATA
Found at i:21982294 original size:900 final size:895
Alignment explanation
Indices: 21979337--21985463 Score: 7257
Period size: 890 Copynumber: 6.9 Consensus size: 895
21979327 TTAAAGCTTA
* * *
21979337 CGGTTCAAGATTTTTTAAAA--TTTTCGGAAGGATTTTTGG-CCCAAACTTGGTAGACGTGAAT-
1 CGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG-ATC
* * *
21979398 C-TGTATTTTTGTTGGCAATGCA-AGAAAATATTCAGCTAAAAAAATCGAAGTGTAAAAAGATTT
65 CTTGTATTTTTGTTGGC-ATGCACA-AAAAAATTCAGCT-AAAAACTCGAAGTGT-ACAAGATTT
*
21979461 TGTGA-CATTTTGAAAAAAGTGT-CCCATTCCAGACACTTTAATGGCTACTGGCAGC-AACCTGT
126 TGTGACCA-TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * *
21979523 -AAAT-TCAAAATGCTC-TTGA-GGTGTTTGAGTTCTCAAGGTTTGATGAGGGATAGGGTGGCCA
190 AAAATCTC-AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG-GGCCA
* * *
21979584 AT-TAAAGGGCCAAGTTA-CAGCAACCCATCGCACATCATGTGTGCACCCCACCCCCGGCCCCCT
253 ATAT-AAGGGCCAAG-TACCAGC-ACCCATCGCACATCATGTGCGCA-CAC-CCCCCGGCCCCCC
* * *
21979647 CGATCACTGGAAA-CCCAATGCCGCCAGTCAGGTTCTCCGACGATGCTCCGGTGATGGTGCCCCG
313 CGATCA-TCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGGCGATGGTG-CCCG
** * * * *
21979711 GTGAAGAAAAATGCTGCACCAGCACATGCCTGAGCCCAGCATGTGCTG-T-CACAACC-C--T--
375 ACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCA-ACCCTCGGTCC
* **
21979769 --T--G------G-CT-CG---G---TCC-AAT-CTTAGACTGGGAAACAACTCCGTATGCCTAA
439 GGTCCGATCTTAGACTGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * ** *
21979814 GTCAACCCACGAAACGAGCGTGCTGGCACTCAGCCGGCCAGAGGGGTAGGATGCGCAAGCCGGGG
504 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGG
* * * * * *
21979879 ATTGGTCAGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCACAACCCTCAGTCCAGTCTGATCT
569 A-TCGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCT
* * *
21979944 TAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACAAAACGAGCGGGCGTGCGGACGGGTG
633 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGGCG-G-GG--GGGCG
* * *
21980009 GGCACTACGCCGACCGGAGAGACGGGATGCGCAAGCCGTGGATCGATTGGGTGGTAGGTGGGTTT
693 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
21980074 AGGCACATCTTCATATTTCTGCATGCGAATGCCATTTTTATGGCTTTTAAATTCATACAATGGTC
758 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
*
21980139 CCTTCAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTCTATGATTTTTGA
823 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC-ATGATTTTTGA
*
21980203 AACTTCTTG
887 AACTTTTTG
* * * * * *
21980212 CGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCGAACTTGGAAGACGTGATGC
1 CGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * *
21980277 TTGTATTTTT-TTGGCATGCACAAAAAAATTCAGCCAAAAACTGGAAGTGTACAAGATTTTGTGG
66 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* *
21980341 CCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACCTGTAAAATC
131 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
*
21980406 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGG
196 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * *
21980471 GCCAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCCGGCCCCCCCGATCACCGGAAC
261 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCATCGAAAC
* * * * *
21980536 CCCAATGCCGCTGGTTAGGTTCTCCGATGATGCTGCGACGATGGTGCCCCGACGAAGAAAAATGC
326 CCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGGCGATGGTG-CCCGACGAAGAAAAATAC
* *** ** *
21980601 GGCACCAGCATATGCCCGAGCCCAGCATGTGCTGCCATAACCCTCGGTGTGGTCCAATCTTAGAC
389 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * * * *
21980666 TGGGAATGAACTCTGTATGCTTAGACTGGAAATGAACTACGTATGCCTAAGTCAACCCATGAAAC
454 TGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * ** * * *
21980731 GAGTGTGTGGGCGCTCAGCCGGTCAGAGGGGCGGGATGCGTAAGTCGGGGATCGATCTGGTCCCA
519 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCG-TCGGGTCCCC
* * * * *
21980796 CTCTGCGTGTTGTCGATCTTACTGTCACAACCCTCGGTCCGGTCCGATCTTAGACTAGGAATGAA
583 CTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* * *
21980861 CTCCATATGCCTAAGCCAACCGATGAAAC-A--AGC----GGGCGGGCACTACGCCGGCCAGAGA
648 CTCCGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGGGGGGCGGGCACTACGCCGGCCAGAGA
* * * * *
21980919 GATGGGATGCGTAACCCATGGATCGATAGGGTAGTAGGTGGGTTTAGGCACATCTTCATATTTCT
713 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
**
21980984 ATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
778 GCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* *
21981049 TTTGATGCCAAGACGACTCGTTTT-TATTTTTCATGATTTTTGAAAC-TTTTG
843 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
** * *
21981100 CGGTTC-AGGATTTTTTAAAATCCTTTC-AGAAGTAGTTTTGGCCCCAAACTTGGTAGACATGAT
1 CGGTTCGA-GATTTTTTAAAATTTTTTCGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
21981163 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
64 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* * *
21981228 GACCATTTAAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAA
129 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * *
21981293 TCTCAAATGCTCTCTAAGGGGGTGTGAGTTCTCGAGGTTGGATGAGGGATAGGGAGCCAATATAA
194 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* ** *
21981358 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCAATCGCCGG
259 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCATCGA
* * * *
21981423 AACCCTAATGCCGCCAGTCAGGTTTTCCGACGATGCTCTGGTGATGGTGCCCTGACGAAGAAAAA
323 AACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTC-GGCGATGGTGCCC-GACGAAGAAAAA
* * *
21981488 TATGGCTCCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCAGTCCGATCTTA
386 TACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTA
* * **
21981553 GAATGCGAATGAACTCCGTATACTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATAA
451 GACTGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * *
21981618 AACGAGCGTGCGGGTGCTCAGCCGGCCAGTGGGGCAGGATGCACAAGCCAGGCATCAGTCGGGTC
516 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-GTCGGGTC
* * * * * * * *
21981683 CCCTTCTGCATGCTGCCAATCCTGCTACCACAACACTCGGTCTGGTCCAATCTTAGACTGGGAAT
580 CCCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
* *
21981748 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGGGGGGGCGGGCACTACGCCAGTCA
645 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGGCGGGGGGGCGGGCACTACGCCGGCCA
* *
21981813 GAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGTTGGGTTTAGGCACATCTTCATAT
709 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * * **
21981878 TTCTGGGTGCCGATGCCATTTTTATGGCCTGTAAATTCATACTTTGGTCCCTTAAGCCTTCACGT
774 TTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * * ** *
21981943 GAAGTTTCATGGCAAGACGACTCTTTTTTTATTTTTCACGATTTTCCAAACTTTTTA
839 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
* *
21982000 CGGTTCGGGATTTTTTAAAATTTTTTCGAAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
1 CGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * * *
21982065 TTGTATTTCTGTTGGCACGCA-AAACAAAATTCAGCTAAAAACTCAAAGTGAACAAGATTTTGTG
66 TTGTATTTTTGTTGGCATGCACAAA-AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* * * * *
21982129 ACCATTTGAAAAAAGTGTCCGCATTTAAGACACTTTAATTGCTACTGGCAGCAAACCTATAATAT
130 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
21982194 CTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGGGGGACAGGGGGCCAATATAAG
195 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * ** *
21982259 GGCCAAGTACCAGCACCCATCGCACATCTTGTGCGCACA-CCCCCTGCCCTTCCGATCGTCGAAA
260 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCATCGAAA
* ** * **
21982323 CCCTAATGCCGTTGGTCAGGTTCTCCGACGA---T--G-G-T-G-CCCCGGTGAAGAAAAATACG
325 CCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCGATGGTGCCCGACGAAGAAAAATACG
* * *
21982379 TCACCAGCACATGCTCGAGCCCAGCATGTGTTG-TCGCAA-CC-C--T-C-G---G----T---C
390 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGAC
*
21982427 --C---T--A-TCCG-AT-CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAAC
454 TGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * *
21982482 GAGCGTACGAGCACTCAGTCGGCCAGAGGGGCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCC
519 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-GTCGGGTCCCC
* * * * * * * *
21982547 CTCTGCGCGCTATCGATCTTGCTGCCGCAACCCTCGATCCGGTCCAATCCTAGACTAGGAATGAA
583 CTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* *
21982612 CTCCGTATGCCTAAGCCAACCGACGAAACGA---GCGGGCGGGCGGGCACTACGCCGGCTAGAGA
648 CTCCGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGGGGGGCGGGCACTACGCCGGCCAGAGA
* *
21982674 GACCGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
713 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
21982739 AG-GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAT
778 -GCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* *
21982803 GTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATTGTTGAAAC-TTTTG
842 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
* * * *
21982856 GGGTTTGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAGCTTGGTAGACGTGACCC
1 CGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * *
21982921 TTGTATTTTTGTTGACATCCACAAAAAAATTCAGCTGAAAACTCGAAGTGTACAAGATTTTGTGA
66 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
21982986 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
131 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
21983051 TCAAATGCTCTTTAAGGGGGT-TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
196 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * *
21983115 GCCAAGTGCCAGCACCCTTCGCACATCATGTGCGCACACCCCCCGG-CTCCCCGATCATCGAAAC
261 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCATCGAAAC
* * * * *
21983179 CCTAATGCCGCCGATCAAGTTCTCCGACGATGCTCCGGCGATGGTGTCCCGAGGAAGAAAAATGC
326 CCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGGCGATGGTG-CCCGACGAAGAAAAATAC
* * * * *
21983244 AGCACCAGCACCTGCCCGAGCCCAGCATGTGCTGCTGCAGCCCTCAGTCTGGTCCGATCTTAGAC
389 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * * ** * * *
21983309 TGGGAATGAACTCTGTATGTTTAGACAAGGAATGAACTCCCTATGCCTAAGTCAACCCATGAATC
454 TGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * *
21983374 GAGCGTACGGGCGCTCAGCCAGCCAGAGGGGCGGGATGTACAAGTCGGGGATAGGTCGGGTCCCT
519 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGAT-CGTCGGGTCCCC
* * ** * * * *
21983439 CTCTGCATGCTGTCGATCCTGCTACCGTAACCCTCAGTCCCGTCCAATTTTAGACTGGGAATGAA
583 CTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* * * *
21983504 CTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGAGCGAGCGGGTGGACACTACGTCGGCC
648 CTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGGCG-G-G-G-GGGCGGGCACTACGCCGGCC
* * * * *
21983569 AGAGAGACGGGACGTGCAAGTCGTGGATCGATAGGG-GTGTAGACTCGG-TTAGGCACATCCTTC
708 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG-GTAG-GTGGGTTTAGGCACAT-CTTC
* *
21983632 ATATTTCTACGTGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
770 ATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
**
21983697 ACGTGAAG-TTCATGGCAACGACGACTCGTTTTCTACTTTTTCATGATTTTCAAAACTTTTTG
835 ACGTGAAGTTTCATGGCAA-GACGACTCGTTTTCTA-TTTTTCATGATTTTTGAAACTTTTTG
* * * **
21983759 CGGTTCGAGATTTTTTAAATTTTTTTCGGAAGGATTTTTTGGCAACAAACTTGGTAGACGTGATC
1 CGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
21983824 CTTGTGTTTTGGATTGGCATGCA-TAAAAAATCTCA-CT-AAAACTCGAAGTGTACAAGATCTTT
65 CTTGTATTTTTG-TTGGCATGCACAAAAAAAT-TCAGCTAAAAACTCGAAGTGTACAAGAT-TTT
* *
21983886 GTGACCATTTG-AAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGCAGTAAACCTGTAA
127 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
*
21983950 AATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
192 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * * **
21984015 AAGGGCCAAGTACTAGCACCCCTCGCATATCATGTGCGCACACCCCCCCTGG-CCCTTCGATCAT
257 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GGCCCCCCCGATCAT
*
21984079 CGAAACCCCAATGCCGCCGGTCAGG-T-T----C--T-C-CGGCGATGGTGCCCCACAGAAGAAA
320 CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCGATGGTGCCCGAC-GAAGAAA
* * *
21984134 AATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCGCAA-CC-C--T-C-G---GAT-T
384 AATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCT
* * *
21984189 TAG--T-C---T--A------AT-CTTAGATTGGGAATGAACTTCGTATGCCCAAGTCAACCCAC
449 TAGACTGCGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
** * * * * *
21984239 GAAACGAGCGTGCGGGCGCTCAGTTGGCCAGAGGGGCTGGGATGCGCAAACCGAGGATCGACCTG
514 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC-GGGATGCACAAGCCGGGGATCG-TCGG
** * * ** * * * *
21984304 GTCCCCCTCTGCGTGCTACCAATCCTACTATCGCAACCCTCGGTCTGGTCTGATCTTAGATTGGG
577 GTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGG
* *
21984369 AATGAACTTCGTATGCCTAAGCCAACCGACGAAACGA---GCGGGTGGGG-GGGCACTGCGCCGG
642 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGG-GGGGCGGGCACTACGCCGG
*
21984430 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGTGGGTTTAGGCA-AGTCTTC
706 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA-TCTTC
* *
21984494 ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTC
770 ATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
*
21984559 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTG
835 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
* *
21984620 -GGTTCGAGATTTTTTAAAACTTTTTT-GGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTGATC
1 CGGTTCGAGATTTTTTAAAA-TTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
21984683 CTTGTTTTTTTGTTGGCATGAACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
65 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
21984748 ACCATTTGAAAAAAGTGCCCCCATTTCAGACAATTTAATGGCTACTGGCAGCAAACCTGTAAAAT
130 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
21984813 CTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAAGTTTGATGAGGGATAGGGGGCCAATATAAG
195 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * ** * *
21984878 GGCCAAGTACCAGCACGCATCGCTCATCATGTGCGCACACCCCCCCGGCCCCCTTGATCGTCGGA
260 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCATCGAA
* * * * *
21984943 ACCCCAATTCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCTTGGCGAAGAAAAAT
324 ACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCT-CGGCGATGGTGCC-CGACGAAGAAAAAT
* * * * *
21985008 AAGGCACCAGCAAATGCCCGAGCCGAGCATGTGCTGCTGCATCCCTCGGTCTGGTCCGATCTTAG
387 ACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAG
* * *
21985073 ACTG-GAAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGAATGCCTAACTCAACCCACGA
452 ACTGCG-AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * * *
21985137 AACGAGCATGCGGGCTCTCAGCCAGCAAGAGGGGCGGGATGCACAAGCCGAGGAACGATCGGGAC
516 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCG-TCGGGTC
* * * * * * * *
21985202 CCCCTCTACATGTTGCCGATCCTGCTGCCACAAACCTTGGTCTGGTTCGATCTTAGACTGGGAAT
580 CCCCTCTGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAAT
* * * * * *
21985267 GAACTCCGTATGCCTAAGCCAACCGACAAAATGAGCGAGCGGGCGGGCGGGCACTATGACGGCCA
645 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGGCGGGGGGGCGGGCACTACGCCGGCCA
* * * * *
21985332 GAGAGATGGGATGCGCAAGCCGTAGATCGATAGGATGGTAGGTGGGTTTGGGCACATATTCATAT
709 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
** **
21985397 TTCTGTATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGAGTTCACGT
774 TTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
21985462 GA
839 GA
21985464 TCCTTGTTTT
Statistics
Matches: 4510, Mismatches: 555, Indels: 350
0.83 0.10 0.06
Matches are distributed among these distances:
855 115 0.03
856 204 0.05
857 188 0.04
858 14 0.00
859 60 0.01
860 233 0.05
861 210 0.05
862 97 0.02
863 72 0.02
864 6 0.00
865 2 0.00
866 49 0.01
867 6 0.00
868 2 0.00
869 2 0.00
870 67 0.01
871 162 0.04
872 4 0.00
873 1 0.00
874 1 0.00
875 47 0.01
876 151 0.03
877 50 0.01
878 62 0.01
879 37 0.01
880 37 0.01
881 5 0.00
882 2 0.00
883 3 0.00
884 1 0.00
885 5 0.00
886 6 0.00
887 48 0.01
888 70 0.02
889 233 0.05
890 488 0.11
891 6 0.00
892 182 0.04
893 3 0.00
894 9 0.00
895 165 0.04
896 69 0.02
897 3 0.00
898 216 0.05
899 166 0.04
900 346 0.08
901 96 0.02
902 191 0.04
903 131 0.03
904 136 0.03
905 18 0.00
906 33 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (895 bp):
CGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCATCGAAAC
CCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCGGCGATGGTGCCCGACGAAGAAAAATACGG
CACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTG
CGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGTCGGGTCCCCCTC
TGCGTGCTGTCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
CGTATGCCTAAGCCAACCGACGAAACGAGGGGCGGGGGGGCGGGCACTACGCCGGCCAGAGAGAC
GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCG
TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
Found at i:21985097 original size:26 final size:26
Alignment explanation
Indices: 21985068--21985120 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
21985058 CTGGTCCGAT
*
21985068 CTTAGACT-GGAAATGAACTCCGTATG
1 CTTAGACTAGG-AATGAACTCCGAATG
21985094 CTTAGACTAGGAATGAACTCCGAATG
1 CTTAGACTAGGAATGAACTCCGAATG
21985120 C
1 C
21985121 CTAACTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.92
27 2 0.08
ACGTcount: A:0.32, C:0.21, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGAATG
Found at i:21985880 original size:26 final size:26
Alignment explanation
Indices: 21985841--21985893 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
21985831 CCGGTCTGAT
*
21985841 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGAGAATGAACTCT-GTATG
21985867 CTTAGACTGAGAATGAACTCTGTATG
1 CTTAGACTGAGAATGAACTCTGTATG
21985893 C
1 C
21985894 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCTGTATG
Found at i:21986752 original size:26 final size:26
Alignment explanation
Indices: 21986723--21986775 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
21986713 CCGATCCGAT
21986723 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21986749 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21986775 C
1 C
21986776 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21987657 original size:26 final size:26
Alignment explanation
Indices: 21987621--21987673 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21987611 CCGATCCGAT
*
21987621 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21987647 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
21987673 C
1 C
21987674 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:21989397 original size:26 final size:26
Alignment explanation
Indices: 21989368--21989420 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
21989358 CCGGTCCGAT
21989368 CTTAGAC-TGGGAATGAACTCCGTATG
1 CTTAGACAT-GGAATGAACTCCGTATG
21989394 CTTAGACATGGAATGAACTCCGTATG
1 CTTAGACATGGAATGAACTCCGTATG
21989420 C
1 C
21989421 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACATGGAATGAACTCCGTATG
Found at i:21990305 original size:26 final size:26
Alignment explanation
Indices: 21990267--21990319 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21990257 CTAGTGCGAT
21990267 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
21990293 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21990319 C
1 C
21990320 CAAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21990678 original size:899 final size:899
Alignment explanation
Indices: 21988829--21995188 Score: 8104
Period size: 899 Copynumber: 7.1 Consensus size: 899
21988819 TCTCTCTGCC
*
21988829 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAATACGACTCGTTTTCTATT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * ** *
21988894 TTTCATGATTTTTGAATCGTTTTGTGGTTCGAGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGG
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
* * * *
21988959 CCCCAAACTTGGTAGACGCGATCCTTGTATTTTTATTGGCATGAACAAAAAACTTCAGCTAAAAA
131 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
21989024 CTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
196 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * **
21989089 TACTCGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGAT
261 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
*
21989154 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCG
326 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-
** * * * * * * *
21989219 CCCCCCAGCCTGCCCGATTGT-GAAACCCCAATGCCGCCCGTCAGGTTTTCCGGCGATGCTCCGG
389 CCCCCTGGCC-CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGA
* * * * * * * *
21989283 TGATGGTTCCCC-AGCGAAGAAAAATACGGCACCAGCACAGGCTCGAACCTAGCATGTGCTGCTG
453 CGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
*
21989347 TAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACAT-GGAATGAA
517 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC-TGGGAATGAA
* * *
21989411 CTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCACTCTGTCC-GCCAGAGGGGCGGG
581 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGGCCAGAGGGGCGGG
* ** * * * *
21989475 ATGCGCAAGCCGGGGATCGGTCGGGT-CCCCTTTGCGTGCTGCCAATCCTACTGCCACAAGCCTC
645 ATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTC
** * * * * *
21989539 GGTCTGGTCCAATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCTAACCGATGAAACGAGCAG
710 GGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * * * * *
21989604 GCAGGCGGGCGGGCACAATGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATTGATAGGGTGG
775 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
21989669 TAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTA
840 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* * *
21989729 AATTCATACAACGGTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGACGACTCGCTTTCTATT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * *
21989794 TTTCACGATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAATTGTTTCGAAAGGAGTTTTGA
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
* * ** *
21989859 ACCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAGCTCAACTAAAAA
131 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* **
21989924 CTCTAAGTGTACAACTTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
196 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* *
21989989 TACTGGCAGCAAACCTAG-AAAATCTCGAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGA
261 TACTGGCAGCAAACCT-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
*
21990053 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACC
325 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * * *
21990118 CCCTCTGGCCGCCCGATCGTTGGAACCCCAATGCCGTCGGTCAGGTTCACCGACGATGCTCCGAT
390 CCC-CTGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGAC
* * * *
21990183 GATGGTGCCCCGACGAAGAAAAATACGGCACTAGCACATGCCCGTGCCCAGCATGTGCTGCCGTA
454 GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
** * * *
21990248 ACCCTCGGTCTAGTGCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTT
519 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * * * *
21990313 CGTATGCCAAAGTTAACCCACGACATGAGCGTGCGGGCGCTCAACCAGCCAGAGGGGTGGGATGC
584 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * * * *
21990378 GCAAGTCGGGGATCAACCGAGTCCCCCTCTGCGTGTTTCCAATCCTACTGTCGCAACCCTCAGTC
649 GCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTC
* * * **
21990443 TGGTCTGATCTTAGACT-AGAATGAACTCCGTATGCTTAAGCCAACCGATGAAACGAGCTTGCGG
714 TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * * * *
21990507 GCGGGCGGGCACAATGCCGGCCAGAGAGACGGGATACGCAAGCCGTTGATCGATAAGGTGGTAGG
779 GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
21990572 TGGGTTTAGGCACATCTTCATATTTCTGCATACCAATGCTATTTTTATGGCTTGTA
844 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* * * *
21990628 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGAATCATTTTCAATT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * * *
21990693 TTTCATGATTTTTTAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTTGCAAGGGGTTTTGG
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
*
21990758 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAA
131 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* * *
21990823 CTCGAAGTGCACAAGATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGC
196 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * * *
21990888 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTATGGAGGTGTGACTTCTCAAGGTTTGAT
261 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* *
21990953 GAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAAGTGCGCACACCC
326 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * *
21991017 CCCTCGGCCCCCCCGATCGTC-GAATCCCCAATGCTGTCGGTCAGGTTTTTCGGTGATGCTCCGA
391 CCCT-GG-CCCCCCGATCGTCGGAA-CCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGA
* * ** ***
21991081 CGATGCTACCCCGATAAAGAAAAATGCAAAACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
453 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * *
21991146 AACCCTCGATCCGGTCTGATCTTATACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACG
518 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC-
* * * * *
21991211 T-TGTGTGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAAAGGGGAGGGAT
582 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * *
21991275 GCGCAAGCCGGGGATCAACCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAACCCTCAG
647 GCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGG
* * *
21991340 TCTAGT-TCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG
712 TCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* * * * *
21991404 CAGGCGGACGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTTGATTGATAGGGTGGT
776 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
21991469 AGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTA
841 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* *
21991528 AATTCATACAATGGTCCCATAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
*** * * * * *
21991593 TTTCACGATTTGCAAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGCTTTGG
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
* * * *
21991658 CCCCGAACTTGGTAGACGTTATCCTTGTATTTTTTTTGGCATGCACAAAAATATTCAGCTAAAAA
131 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
21991723 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAGACACTTTACTGGC
196 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * * *
21991788 TATTGGCAGCAAACCAGAAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
261 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * *
21991853 GAGGGATAGGGGGCCAATATAGGGGCCAAGTACCAGCACCCATCGCACATCATCTGCGCAAACCC
326 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * *
21991918 CCC-GGCCCCCCGATCGTCGGAACCCCAATGTCGCCGGCCAGGTTCT-C--CGA---T-----GA
391 CCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGA
* * * * * * **
21991971 TGGTGCCCCGGCAAAGAAAAATACGGCACCAGCACATGCCCGAGACCAGCATTTGTTGCCAAAAC
456 TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * *
21992036 CCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTCATATGCTTAGACTGGGAATGAACTCCG
521 CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
21992101 TACGCCTTAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGGCGGCCAGAGAGGCGGGATGCG-
586 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
** * * * ** * *
21992165 ATACCCGAGGATCGACCGGGTCCCCCTCTTCGTGCTGCCGATCTTGTTGCCACAACCATCGGT-T
651 A-AGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCT
* * * * ** * *
21992229 CGATCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAATCCGTCCGACGAAACGAGCGGACTG
715 -GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * * * * *
21992294 GCAGGCAGGCACTACGTCGACCAGGGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGG
779 GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
** *
21992359 TGAATTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTA
844 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* *
21992415 AATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTCTT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** * * * * * *
21992480 TTTCACGCTTTTCAAAATTTTTTACGGTTTGGGATTTTTTAGAATTTTTTCGGATGGAGTTTTGG
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
** * *
21992545 CCCTGAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAA
131 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
21992610 ATC-AGAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGG
196 CTCGA-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
21992674 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGA
260 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * *
21992738 TAAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACC
325 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * *
21992803 CCCATGGCCCCCCCCGATCATTGGAACCCCAATGCCGTCGGTCAGGTTCT-C--CG--G-T----
390 CCCCTGG--CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGA
* * * * * *
21992858 -GATTGTGCCCC-AGTGAAGAAAAATGCAGCACCAGCACATGCCTGAGCCTAGCATGTGCTACCG
453 CGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
21992921 CAACCCTCGGTCTGATTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAAC
517 CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * **
21992986 TCCGTATGCCTAAGTCAACCCATGAAAAGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGAAGGAT
582 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
** * ** * * * *
21993051 GCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTATCGACCCTACTGTCGCAACCCTTGA
647 GCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGG
* * * *
21993116 TCTGGT-TCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAATGAGTGGG
712 TCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----G
* * *
21993180 CGGGTGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGG
772 CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
*
21993245 TGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
837 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* * * * * *
21993308 AATTCATACACTGGTCCCTTAAGTCTTCACGTGAAGTTTCATGGTAGGACGACTTGTTTTCTCTT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* * * * **
21993373 TTTTATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAAAATTTTC-AGAAGGA-TTTTG
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGA-AAGGAGTTTTG
* * *
21993436 GCCCCAAACTTGGTAGACATGATCCTTATATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAA
130 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
21993501 ACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTACTGG
195 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* *
21993566 CTACTCGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGA
260 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* * *
21993631 TGAGGGATAGGGGGCCAATACAAGGGCCAATTACCAGCACCCATCACACATCATGTGCGCACA-C
325 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * *
21993695 CCCCTGGTCGCCCCGATCGTCGGAACGCTAATGTCGTCGGTCAGGTTCTCCGGCGATGCTCCGAC
390 CCCCTGG-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGAC
* * * *
21993760 GATGGTGCCTCGGCGAAGAAAAATGCGGCACCAGCACATGGCCGAGCCCAGCCTGTGCTGCCGCA
454 GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* *
21993825 ACCCTCGGTCCGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTC
519 ACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * * * * * * *
21993890 CGTATACCTAAGTCAACCCACAAAATGAGCGTACGGGTGGTCAGCCTGCCAAAGCGGCCGGATGC
584 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * * * *
21993955 GCAAGTCGGGGATCGACCGGGTCCCCCTTTACGTGTTGCCGATCTTACTACCACAACCTTCGGTC
649 GCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTC
* ** * *
21994020 CGGTCCAATCTTAGACTGGGAATGAACTCCGTACGCCTAAGCCAACCAACGAAACGA----GCGG
714 TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * * * *
21994081 GCAGGAGGGCACTATGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGG
779 GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * * *
21994146 TGGGCTTAGGCAGATCTTCATATTT-TCACATGCCAATGCCATTTTTATGGCTTGCA
844 TGGGTTTAGGCACATCTTCATATTTCT-GCATGCCAATGCCATTTTTATGGCTTGTA
* *
21994202 AATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGAAGACTCG-TTTCTATT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
** * * * * * *
21994266 TTTCACGATTTTCAAAACTTTTTTCAGTTC-AGGATTTTTTTAAATTCTTTCGGAACGAGTTTTG
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGAAAGGAGTTTTG
* *
21994330 GCCCCAAACTTGGTAGATGTGATCCTTGTATTTTT-TCTGGCTTGCACAAAAAAATTCAGCTAAA
130 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAAAAATTCAGCTAAA
* *
21994394 AACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATG
194 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* *
21994459 GCTACTGGCAGCAAACCTGTAAAATTTCAAATGCTCTTTAAGGGGGTGTGATTTCTCGAGGTTTG
259 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * * *
21994524 ATGAGGGATAGGAGGCCAATATAGGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGTACAC
324 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
** * * * *
21994589 CCCCC-GGCCCGCCCGATCGTTAGAACCCCAATGCTGTCGGTCAGGTTCTTCGGTGATGCTCCGG
389 CCCCCTGGCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGA
* * * ***
21994653 CGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACAAGCTCGAGCCCAGCATGTGCTATTGC
453 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * * * *
21994718 AACACTCGATCCGGTCTGATCTTAGACTGGGAATGAACACCGTATGCTTAGACTGGGAATAAACT
518 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * *
21994783 CCGTATGCCAAAGTCAACCCACGAAGCGAGCGTGCGGGCACTCAACCGGCC--A-------G--G
583 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * ** *
21994837 -G--A-TC---GAT----CGGGTCCCCCTCTGCGTGCTGCCAATCCTACTGTCATAACCCTCGAT
648 CGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGT
* * *
21994891 -TCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCAACAAAAGGAGCGAGC
713 CT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-GAA--A-CGAGC
* * * *
21994955 GGACGGGC-GGCTGGGCACTACTCCGGCCAGGGAGACGGGATGCTCAAGCCGTGGATCGATAGGG
773 GGGCGGGCGGGC-GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* * * *
21995019 TAGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATCGCTTCTA
837 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
21995082 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
1 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
* ** *
21995147 TTTCACGA-TTTTGGAACTTTTTACGGTTTAAGATTTCTTAAA
66 TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAA
21995189 GACGTGATCC
Statistics
Matches: 4761, Mismatches: 630, Indels: 158
0.86 0.11 0.03
Matches are distributed among these distances:
872 82 0.02
873 2 0.00
875 1 0.00
876 6 0.00
879 4 0.00
880 185 0.04
881 18 0.00
882 1 0.00
883 1 0.00
885 1 0.00
886 90 0.02
887 652 0.14
889 295 0.06
890 2 0.00
891 35 0.01
892 172 0.04
893 353 0.07
894 604 0.13
895 7 0.00
896 1 0.00
897 4 0.00
898 110 0.02
899 957 0.20
900 860 0.18
901 55 0.01
902 263 0.06
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (899 bp):
AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG
CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
CCCTGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGA
TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
CCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
AAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCTG
GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
Found at i:21992400 original size:887 final size:886
Alignment explanation
Indices: 21985458--21995188 Score: 11852
Period size: 900 Copynumber: 11.0 Consensus size: 886
21985448 TTAAGAGTTC
* * *
21985458 ACGTGATCCTTGTTTTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACACGAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * **
21985523 ATTTTGTGACCATTTGAAAAAAGGTGTCACCATTTCAGGCACTTTAATGGCTACTACCAGCAAAC
66 ATTTTGTGACCATTTGAAAAAA-GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
21985588 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
130 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
21985653 CAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGACCCCCCCG
195 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-GCCCCCCG
* * * * * * ** * *
21985718 ATCGCCGGAACCCCAATGCCGTCGATCAGCTTCTTCGGTGATGGTGCCCCGAAGAGGAATAATGC
258 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGGTGCCCCGGCGAAGAAAAATGC
* * * *
21985783 AGCACCAGCACATGCCTGAGCCCAGCATGTGCTGTCC-CAACCCTCTGTCCGGTCTGATCTTAGA
323 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CCGCAACCCTCGGTCCGGTCCGATCTTAGA
* * *
21985847 CTGGGAATGAACTTCGTATGCTTAGACTGAGAATGAACTCTGTATGCCTAAGTCAACCCACGAAA
387 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * ** *
21985912 CGAGCCTGTGGGCGCTCAGCCTGCCAGAGGGGCGGGAAT-CGCAAGCTGGGGATCGGTCAGGTCC
452 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG-ATGCGCAAGCCGGGGATCGACCGGGTCC
* * * * ** * * * ** * * *
21985976 CCCTCTACGTGTTACCGATCCTGCTATCGCAACCTTCAGTTC-AGTCTGATGTTAGGCTAGGAAT
516 CCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGA-TCCAATCTTAGACTGGGAAT
* * * * * *
21986040 GAACTCCATGTGCCTAAGCCAACCAACGAAAC-A--AGCGGACGGGCGGGCACTACGTCGGCCAG
580 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAG
* * *
21986102 AGAGACGAGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTTATATT
645 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * ** ** * *
21986167 TCTACATGCCAATGCCATTTTTATCACTTGTAAATTCATACAATGGTCCCTGCAGCCATCACATG
710 TTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * ** *
21986232 AAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAG
775 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAG
21986297 A-TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
840 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
21986343 ACGTGATCTTTTTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
*
21986407 ATTTTGTGACCATTTGAAAAAAGTGTGCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
** *
21986472 TGTAAAATCTCAAATGCTCTTTAAGGAAGTGTGAGTTCTCGAGGTTCGATGAGGGATAGGGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
**
21986537 AATATAAGGGCCAAGTACCAGCACCCATCATACATCATGTGCGCACACCCCCCGGCCACCCCGAT
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC-CCCCGAT
* * ** * *
21986602 CGTCGGAACCCCAATGCCGCCAGTCAGGTTCTTCGGGGATGGTGCCCCGGTGAAGAAAAATGCAG
260 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGGTGCCCCGGCGAAGAAAAATGCGG
* *
21986667 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCCCAACCCTCGGTCCGATCCGATCTTAGACTG
325 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
** *
21986732 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACAAACGAAACTA
390 GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * *
21986797 GCCTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCTCAAGCCGGGGATCGGCCAGGTCCCGCT
455 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCT
* * * * * * * *
21986862 CTTCGTGCTGCTGATCCTACTGCCGCAACACTCAGTCTGGTCCAATCTTAGATTGAGAATGAACT
520 CTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACT
* * * *
21986927 CCGTATGCCTAAGCCGACTGACAAAACGAGCGGGCGGGCGGG-GGGCACTACGCCGGCCAGAGAA
585 CCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAG
* * * * *
21986991 ACGGGATGCGCAA-CCATGGATCGATAGGGTGGTAGGTGGGTTTTGACACATCTTCATATATCTG
649 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG
* * *
21987055 CGTGCGAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGT
714 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** *
21987120 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTT
779 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTT
* * * *
21987185 TTTAAAATTTTTTCAGAAAGAGTTCTGGCCCTAAACTCT--TAAG
844 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT-TGGT-AG
* * * *
21987228 ACATGATCCTTGTATTTCTGTTAGCATACACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
21987293 ATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
*
21987357 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
21987422 AATATAAGGGCCAAGTACCAGCACCCACCGCACATCATGTGCGAACACACCCCCCGGCCCCCCCG
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCCGG-CCCCCCG
* * * *
21987487 ATCGTCGGAACCCCAAGGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTTCCCAGGCG
258 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--CGA---T-----GATGGTGCCCCGGCG
* * * ** *
21987552 AAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATTTGCTACCTTAACCC-CTGGTCCGAT
312 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GGTCCGGT
*
21987616 CCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
376 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * *
21987681 AACCCACGAAATGAGCGTACGGGCACTCAGCCGGCCAAAGGGGCGGGATGCGCAAGCCGGGGATC
441 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
** * * * * * ** **
21987746 GGTCGGGTCCCCCTCCGCGTGTTGCCGATCTTGCT-ACATAACCCTCGGTCCGATCTGATCTTAG
506 GACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAG
* * * * *
21987810 ATTGGGAATGAACTCCTTATGCTTAAGCCAACC-ACCAAACGAGCGGGCGGACGGGCAGGCGGGC
571 ACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGG-CGGGCGGGCGGGC
** *
21987874 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTTTGTGGGTTTAAG
631 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
* *
21987939 CACATCTTCATATTTATGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
696 CACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
*
21988004 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTCTCGATTTTTGAAACT
761 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
* * * * *
21988068 TTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAATGAGTTTTAGCCCTAAACTTGGTAG
826 TTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * *
21988129 ACTTGATCCTTGAATTTTT-TTGGCATGCACAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
*
21988193 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
21988258 TGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *
21988323 AATATGAGGGCCAAGTACCAGCACCCATCGCACATTATGTGCGCACAACCCCCCTGGCCCCCTCG
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCC-GGCCCCC-CG
* * * * *
21988388 ATCGTCGAAACCCCTATGCCGCCGGTCAAGTTCTCCGGTGATGGTGCCCCGACGAAGAAAAATGC
258 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGGTGCCCCGGCGAAGAAAAATGC
** *
21988453 GGCACCAGCACATGTTCGAGCCCAGCATGTGCTGCCGCAAGCCTCGGTCCGGTCCGATCTTAGAC
323 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGAC
* * *
21988518 ------T--A---C----G---A-A-T--G-A--AA-TTCGTATGCCTAACTCAACCCACGAAAT
388 TGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAC
* * * * * * * * *
21988557 GAGCGTGTGGGCGCTCAACCTGCTAGAGGGGCAGGATGCACAAGTCAGGGATCGATCGGGTCCCC
453 GAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCC
** * * * *
21988622 CTCTATGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGATTCGATCTTAGACGGGGAATGAA
518 CTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAA
* *
21988687 CTCCGTATGCCTAAGCCAACCGACGAAACGAGTTGGCGGGTGGGCGGGCGGGCACTACACCGGCC
583 CTCCGTATGCCTAAGCCAACCGACGAAACGA----GC-GGCGGGCGGGCGGGCACTACGCCGGCC
* * *
21988752 AGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGATAGTAGGTGGGTTTAGGCACATCTTCATA
643 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA
*
21988817 --TTT-C-T--C--T--C-------T-GC----CAATTCATACAATGGTCCCTTAAGCCTTCACG
708 TTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
* * * * **
21988860 TGAAGTTTCATGGCAATACGACTCGTTTTCTATTTTTCATGATTTTTGAATCGTTTTGTGGTTCG
773 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCG
**
21988925 AGATTTTTTAAAATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTAG
838 AGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * * *
21988974 ACGCGATCCTTGTATTTTTATTGGCATGAACAAAAAACTTCAGCTAAAAACTTGAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
21989039 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGTAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
**
21989104 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGGTTTGATGAGGGATAGGGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * *
21989169 AATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCGCCCCCCAGCCTGCCC
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA---CCCCCCGGCC-CCCC
* * * * * *
21989234 GATTGT-GAAACCCCAATGCCGCCCGTCAGGTTTTCCGGCGATGCTCCGGTGATGGTTCCCCAGC
257 GATCGTCGGAACCCCAATGCCGCCGGTCAGG---T-------T-CTCCGATGATGGTGCCCCGGC
* * * * * * *
21989298 GAAGAAAAATACGGCACCAGCACAGGCTCGAACCTAGCATGTGCTGCTGTAACCCTCGGTCCGGT
311 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
21989363 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACAT-GGAATGAACTCCGTATGCCTAAGT
376 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC-TGGGAATGAACTCCGTATGCCTAAGT
* * *
21989427 CAACCCACAAAACGAGCGTGCGGGCACTCTGTCC-GCCAGAGGGGCGGGATGCGCAAGCCGGGGA
440 CAACCCACGAAACGAGCGTGCGGGCGCTCAG-CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
** * * * * * *
21989491 TCGGTCGGGT-CCCCTTTGCGTGCTGCCAATCCTACTGCCACAAGCCTCGGTCTGGTCCAATCTT
504 TCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTT
* * * * *
21989555 AGACTAGGAATGAACTCTGTATGCCTAAGCTAACCGATGAAACGAGCAGGCAGGCGGGCGGGCAC
569 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGCAC
* * * * *
21989620 AATGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCA
633 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*
21989685 CATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACGGTCCCTTA
698 CATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* *
21989750 AGCTTTCACGTGAAGTTTCATGGCAAGACGACTCGCTTTCTATTTTTCACGATTTTTGAAACTTT
763 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
* * * **
21989815 TTATGGTTCGAGATTTTTTAAAATTGTTTCGAAAGGAGTTTTGAACCCAAACTTGGTAG
828 TTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* ** * * *
21989874 ACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAGCTCAACTAAAAACTCTAAGTGTACAAC
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
*
21989939 TTTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
21990004 TAG-AAAATCTCGAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGC
131 T-GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
21990068 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCTCTGGCCGCCCG
195 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-C-GGCCCCCCG
* * *
21990133 ATCGTTGGAACCCCAATGCCGTCGGTCAGGTTCACCGACGATGCTCCGATGATGGTGCCCCGACG
258 ATCGTCGGAACCCCAATGCCG-C---C-GG-TCA--G--G-TTCTCCGATGATGGTGCCCCGGCG
* * * * ** *
21990198 AAGAAAAATACGGCACTAGCACATGCCCGTGCCCAGCATGTGCTGCCGTAACCCTCGGTCTAGTG
312 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* * * *
21990263 CGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCAAAGTTA
377 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * *
21990328 ACCCACGACATGAGCGTGCGGGCGCTCAACCAGCCAGAGGGGTGGGATGCGCAAGTCGGGGATCA
442 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* * * * * * * * **
21990393 ACCGAGTCCCCCTCTGCGTGTTTCCAATCCTACTGTCGCAACCCTCAGTCTGGTCTGATCTTAGA
507 ACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGA
* * * * * *
21990458 CT-AGAATGAACTCCGTATGCTTAAGCCAACCGATGAAACGAGCTTGCGGGCGGGCGGGCACAAT
572 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGCACTAC
* * *
21990522 GCCGGCCAGAGAGACGGGATACGCAAGCCGTTGATCGATAAGGTGGTAGGTGGGTTTAGGCACAT
636 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
21990587 CTTCATATTTCTGCATACCAATGCTATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
701 CTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * * * *
21990652 CTTCACGTGAAGTTTCATGCCAAGACGAATCATTTTCAATTTTTCATGATTTTTTAAACTTTTTA
766 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTA
* * * *
21990717 CGGTTTGAGATTTTTTAAAATTTTTTTGCAAGGGGTTTTGGCCCCAAACTTGGTAG
831 CGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
21990773 ACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGCACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
21990838 ATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * *
21990903 TGTAAAATCTCAAATGCTCTTTATGGAGGTGTGACTTCTCAAGGTTTGATGAGGGATA-GGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *
21990967 AATATAAGGGCCAAGTACCAGCACCCATCACACATCAAGTGCGCACACCCCCCTCGGCCCCCCCG
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGG-CCCCCCG
* * * * * **
21991032 ATCGTC-GAATCCCCAATGCTGTCGGTCAGGTTTTTCGGTGATGCTCCGACGATGCTACCCCGAT
258 ATCGTCGGAA-CCCCAATGCCGCCGGTCA--------GGT--T-CTCCGATGATGGTGCCCCGGC
* *** *
21991096 AAAGAAAAATGCAAAACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGT
311 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* * * * *
21991161 CTGATCTTATACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACGT-TGTGTGCCTAAGT
376 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC-TCCGTATGCCTAAGT
* * *
21991225 CAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAAAGGGGAGGGATGCGCAAGCCGGGGAT
440 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * * * * * *
21991290 CAACCGGGTCCCCCTCTACGTGCTGCCGATCCTGCTACCGCAACCCTCAGT-CTAGTTCAATCTT
505 CGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGA-TCCAATCTT
* *
21991354 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCAGGCGGACGGGCAC
569 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCGGGCGGGCGGGCAC
* * *
21991419 TACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTTGATTGATAGGGTGGTAGGTGGGTTTAGGCA
633 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
* * *
21991484 CATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCATA
698 CATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* ***
21991549 AGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTGCAAAACTTT
763 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
* * * * *
21991614 TTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGCTTTGGCCCCGAACTTGGTAG
828 TTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * *
21991673 ACGTTATCCTTGTATTTTTTTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
21991738 ATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAGACACTTTACTGGCTATTGGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
21991803 AGAAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * *
21991868 AATATAGGGGCCAAGTACCAGCACCCATCGCACATCATCTGCGCAAACCCCCCGGCCCCCCGATC
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
* * * *
21991933 GTCGGAACCCCAATGTCGCCGGCCAGGTTCTCCGATGATGGTGCCCCGGCAAAGAAAAATACGGC
261 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGGTGCCCCGGCGAAGAAAAATGCGGC
* * * ** *
21991998 ACCAGCACATGCCCGAGACCAGCATTTGTTGCCAAAACCCTCGGTCTGGTCCGATCTTAGACTGG
326 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
* * * *
21992063 GAATGAACTTCATATGCTTAGACTGGGAATGAACTCCGTACGCCTTAGTCAACCCACGAAACGAG
391 GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * * *
21992128 CGTGCGGGCGCTCAGGCGGCCAGAGAGGCGGGATGCG-ATACCCGAGGATCGACCGGGTCCCCCT
456 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA-AGCCGGGGATCGACCGGGTCCCCCT
* * ** * * * *
21992192 CTTCGTGCTGCCGATCTTGTTGCCACAACCATCGGTTCGATCCGATCTTAGACTGGGAATGAACT
520 CTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACT
* * ** * * * * * *
21992257 CTGTATGCCTAATCCGTCCGACGAAACGAGCGGACTGGCAGGCAGGCACTACGTCGACCAGGGAG
585 CCGTATGCCTAAGCCAACCGACGAAACGAGCGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAG
* **
21992322 ACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGAATTTAGGCACATCTTCATATTTTTG
649 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG
*
21992387 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGT
714 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * ** * * *
21992452 TTCATGGCAAGACGACTCGTTTTCTCTTTTTCACGCTTTTCAAAATTTTTTACGGTTTGGGATTT
779 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTT
* * **
21992517 TTTAGAATTTTTTCGGATGGAGTTTTGGCCCTGAACTTGGTAG
844 TTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * *
21992560 ACGAGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAAATC-AGAGTGTACAA
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA-AGTGTACAA
*
21992624 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
65 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* *
21992689 CTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGAGGGC
130 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
21992753 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCATGGCCCCCCCC
195 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGG--CCCCCC
* * * * * * *
21992818 GATCATTGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATTGTGCCCCAGTGAAGAAAAATG
257 GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGGTGCCCCGGCGAAGAAAAATG
* * * * * * *
21992883 CAGCACCAGCACATGCCTGAGCCTAGCATGTGCTACCGCAACCCTCGGTCTGATTCGATCTTAGA
322 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
* *
21992948 CTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAA
387 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * ** * **
21993013 AGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGAAGGATGCGCAAGTCGGGGATCGGTCGGGTCCC
452 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCC
* ** * * * * * * * *
21993078 CCTCTGCATGCTATCGACCCTACTGTCGCAACCCTTGATCTGGTTCAATCTTAGACTAGGAATGA
517 CCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGA
* * * *
21993143 ACTCCGTATGCCTAAGCCAACTGACGAAATGAGTGGGCGGGTGGGTGGGCGGGCACTACGCCGGC
582 ACTCCGTATGCCTAAGCCAACCGACGAAACGA----GC-GGCGGGCGGGCGGGCACTACGCCGGC
* *
21993208 CAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCAT
642 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * *
21993273 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACACTGGTCCCTTAAGTCTTCAC
707 ATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * * * * *
21993338 GTGAAGTTTCATGGTAGGACGACTTGTTTTCTCTTTTTTATGATTTTTGAAACTTTTTGCGGTTC
772 GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC
* ** *
21993403 GGGATTTTTTAAAAAATTTTCAGAAGGA-TTTTGGCCCCAAACTTGGTAG
837 GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * *
21993452 ACATGATCCTTATATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAG
1 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
21993517 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTACTGGCTACTCGCAGCAAACC
66 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
*
21993582 TGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
131 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * * *
21993647 AATACAAGGGCCAATTACCAGCACCCATCACACATCATGTGCGCACACCCCCTGGTCGCCCCGAT
196 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGAT
* * * * *
21993712 CGTCGGAACGCTAATGTCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCTCGGCGAA
260 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--CGA---T-----GATGGTGCCCCGGCGAA
* *
21993777 GAAAAATGCGGCACCAGCACATGGCCGAGCCCAGCCTGTGCTGCCGCAACCCTCGGTCCGGTCCG
314 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
* * *
21993842 ATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTCCGTATACCTAAGTCAAC
379 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * * * * *
21993907 CCACAAAATGAGCGTACGGGTGGTCAGCCTGCCAAAGCGGCCGGATGCGCAAGTCGGGGATCGAC
444 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * * * * * *
21993972 CGGGTCCCCCTTTACGTGTTGCCGATCTTACTACCACAACCTTCGGTCCGGTCCAATCTTAGACT
509 CGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGACT
* * * * * *
21994037 GGGAATGAACTCCGTACGCCTAAGCCAACCAACGAAACGA---GCGGGCAGGAGGGCACTATGTC
574 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCC
* * *
21994099 GGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGCTTAGGCAGATCTT
639 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
** * *
21994164 CATATTTTCACATGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGTCCTTTAAGCCTT
704 CATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* ** * *
21994229 CACGTGAAGTTTCATGGCAAGAAGACTCG-TTTCTATTTTTCACGATTTTCAAAACTTTTTTCAG
769 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG
* * *
21994293 TTC-AGGATTTTTTTAAATTCTTTCGGAACGAGTTTTGGCCCCAAACTTGGTAG
834 TTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * *
21994346 ATGTGATCCTTGTATTTTT-TCTGGCTTGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAA
1 ACGTGATCCTTGTATTTTTGT-TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
21994410 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAAC
65 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
21994475 CTGTAAAATTTCAAATGCTCTTTAAGGGGGTGTGATTTCTCGAGGTTTGATGAGGGATAGGAGGC
130 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * *
21994540 CAATATAGGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGTACACCCCCCGGCCCGCCCGA
195 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-CCCGA
** * * * *
21994605 TCGTTAGAACCCCAATGCTGTCGGTCAGGTTCTTCGGTGATGCTCCGGCGATGGTGCCCCGACGA
259 TCGTCGGAACCCCAATGCCGCCGGTCAGGTTC-TC--CGA---T-----GATGGTGCCCCGGCGA
* * * *** * * *
21994670 AGAAAAATACGGCACCAGCACAAGCTCGAGCCCAGCATGTGCTATTGCAACACTCGATCCGGTCT
313 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCC
* * *
21994735 GATCTTAGACTGGGAATGAACACCGTATGCTTAGACTGGGAATAAACTCCGTATGCCAAAGTCAA
378 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * *
21994800 CCCACGAAGCGAGCGTGCGGGCACTCAACCGGCC--A-----GGGAT--------C---GAT---
443 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
* * ** * * * **
21994844 -CGGGTCCCCCTCTGCGTGCTGCCAATCCTACTGTCATAACCCTCGATTCGGTCTGATCTTAGAC
508 CCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGAC
* * *
21994908 TGGGAATGAACTCCGTATGCCTAAACCAACCAACAAAAGGAGCGAGCGGACGGGC-GGCTGGGCA
573 TGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-GAA--A-CGAGCGG-CGGGCGGGC-GGGCA
* * * *
21994972 CTACTCCGGCCAGGGAGACGGGATGCTCAAGCCGTGGATCGATAGGGTAGTAGGTGGGTTTAGGC
632 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* *
21995037 ACATCTTCATATTTTTGCATGCCAATGCCATTTTTATCGCTTCTAAATTCATACAATGGTCCCTT
697 ACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
*
21995102 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTGGAACTT
762 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
** *
21995166 TTTACGGTTTAAGATTTCTTAAA
827 TTTACGGTTCGAGATTTTTTAAA
21995189 GACGTGATCC
Statistics
Matches: 7688, Mismatches: 970, Indels: 381
0.85 0.11 0.04
Matches are distributed among these distances:
844 62 0.01
845 85 0.01
846 231 0.03
847 9 0.00
848 10 0.00
849 2 0.00
856 2 0.00
857 87 0.01
858 1 0.00
860 1 0.00
862 1 0.00
863 2 0.00
864 99 0.01
865 56 0.01
866 93 0.01
867 3 0.00
868 2 0.00
870 1 0.00
871 1 0.00
872 85 0.01
873 2 0.00
875 3 0.00
876 7 0.00
878 84 0.01
879 5 0.00
880 189 0.02
881 24 0.00
882 395 0.05
883 218 0.03
884 220 0.03
885 258 0.03
886 161 0.02
887 710 0.09
888 6 0.00
889 297 0.04
890 83 0.01
891 36 0.00
892 167 0.02
893 360 0.05
894 612 0.08
895 4 0.00
896 11 0.00
897 56 0.01
898 312 0.04
899 933 0.12
900 956 0.12
901 340 0.04
902 398 0.05
903 1 0.00
904 1 0.00
905 3 0.00
907 2 0.00
909 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (886 bp):
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGGTGCCCCGGCGAAGAAAAATGCGGC
ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
GAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTC
TGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTC
CGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCA
TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTT
TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
Found at i:21992980 original size:26 final size:26
Alignment explanation
Indices: 21992942--21992994 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21992932 CTGATTCGAT
*
21992942 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21992968 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
21992994 C
1 C
21992995 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:21993873 original size:26 final size:26
Alignment explanation
Indices: 21993844--21993894 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
21993834 CCGGTCCGAT
* *
21993844 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
21993870 CTTAGACTGGGAATAAACTCCGTAT
1 CTTAGACTGGGAATAAACTCCGTAT
21993895 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:21994774 original size:26 final size:26
Alignment explanation
Indices: 21994738--21994790 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21994728 CCGGTCTGAT
*
21994738 CTTAGACTGGGAATGAACACCGTATG
1 CTTAGACTGGGAATAAACACCGTATG
*
21994764 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACACCGTATG
21994790 C
1 C
21994791 CAAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACACCGTATG
Found at i:21997386 original size:26 final size:26
Alignment explanation
Indices: 21997350--21997402 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21997340 CTGGTGCGAT
*
21997350 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
21997376 CTTAGACTGGGAATAAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
21997402 C
1 C
21997403 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:21998273 original size:26 final size:26
Alignment explanation
Indices: 21998237--21998289 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
21998227 CTGATCCGAT
*
21998237 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
21998263 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
21998289 C
1 C
21998290 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:21999446 original size:25 final size:25
Alignment explanation
Indices: 21999418--21999465 Score: 87
Period size: 25 Copynumber: 1.9 Consensus size: 25
21999408 TCCGATGTTA
21999418 GACTGGGAATGAACTCCGTATGCTT
1 GACTGGGAATGAACTCCGTATGCTT
*
21999443 GACTGGGAATGAACTCTGTATGC
1 GACTGGGAATGAACTCCGTATGC
21999466 CTACGTCAAC
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 22 1.00
ACGTcount: A:0.25, C:0.19, G:0.29, T:0.27
Consensus pattern (25 bp):
GACTGGGAATGAACTCCGTATGCTT
Found at i:21999602 original size:285 final size:288
Alignment explanation
Indices: 21999057--21999614 Score: 793
Period size: 285 Copynumber: 1.9 Consensus size: 288
21999047 GGTGCCCTGG
* * *
21999057 CGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTACTACTGCAACCCTTGGTCTGG
1 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTACTACCGCAACCCTCGGTCTGG
* * * * *
21999122 TTCGATCTTAGACTGGAAATTAACTCTGTTTGCTTAGATTGGGAATGAACTCCGTATGCCTAAGT
66 TCCGATCTTAGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * *
21999187 CAACCCATGAAACGAGCGTGCGGGCACTCAATCGGCCAGAGCGACAGGATGCGCAAGCTCAGGAT
131 CAACCCACGAAACGAGCGTACGGGCACTCAACCGGCCAGAGCGACAGGATACACAAGCTCAGGAT
* * *
21999252 CGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGTTGCCGTAACCCTCGGTCCAATCTAATCTTA
196 CGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTACCATAACCCTCGGTCCAATCTAATCTTA
21999317 GACT-GGAATGAATTCTGTATGCCTCGA
261 GACTAGGAATGAATTCTGTATGCCTCGA
21999344 CGAAGAAAAATGCGGCACCAGCACATG-CCGAGCCCAGCATGTACTACCGCAACCCTCGGTCCT-
1 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTACTACCGCAACCCTCGGT-CTG
* * * *
21999407 GTCCGATGTTAGACTGGGAATGAACTCCGTATGCTT-GACTGGGAATGAACTCTGTATGCCTACG
65 GTCCGATCTTAGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * *
21999471 TCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCAGGATACACAAG-TCGGGG
130 TCAACCCACGAAACGAGCGTACGGGCACTCAACCGGCCAGAGCGACAGGATACACAAGCTC-AGG
* * ** *
21999535 ATCGACCGGGTCCCCTTCTGCGTGCTGTCGATCCTGCTACCATAACCCTCGGTCCGGTCTGATCT
194 ATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTACCATAACCCTCGGTCCAATCTAATCT
21999600 TAGACTAGGAATGAA
259 TAGACTAGGAATGAA
21999615 CTCCGTACTC
Statistics
Matches: 238, Mismatches: 30, Indels: 7
0.87 0.11 0.03
Matches are distributed among these distances:
284 2 0.01
285 139 0.58
286 69 0.29
287 28 0.12
ACGTcount: A:0.24, C:0.28, G:0.26, T:0.21
Consensus pattern (288 bp):
CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTACTACCGCAACCCTCGGTCTGG
TCCGATCTTAGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
CAACCCACGAAACGAGCGTACGGGCACTCAACCGGCCAGAGCGACAGGATACACAAGCTCAGGAT
CGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTACCATAACCCTCGGTCCAATCTAATCTTA
GACTAGGAATGAATTCTGTATGCCTCGA
Found at i:22000332 original size:26 final size:25
Alignment explanation
Indices: 22000293--22000344 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 25
22000283 CCGGTTTGAT
22000293 CTTAGACTGGAATGAA-CTATGTATG
1 CTTAGACTGGAATGAACCT-TGTATG
*
22000318 CTTAGAGTGGGAATGAACCTTGTATG
1 CTTAGACT-GGAATGAACCTTGTATG
22000344 C
1 C
22000345 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
25 7 0.29
26 15 0.62
27 2 0.08
ACGTcount: A:0.29, C:0.13, G:0.27, T:0.31
Consensus pattern (25 bp):
CTTAGACTGGAATGAACCTTGTATG
Found at i:22001235 original size:25 final size:26
Alignment explanation
Indices: 22001192--22001243 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
22001182 TCAATCCAAT
22001192 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22001218 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22001243 C
1 C
22001244 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 18 0.69
26 8 0.31
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22003738 original size:861 final size:873
Alignment explanation
Indices: 21999437--22005586 Score: 7190
Period size: 879 Copynumber: 7.0 Consensus size: 873
21999427 TGAACTCCGT
* *
21999437 ATGCTT-GACTGGGAATGAACTCTGTATGCCTACGTCAACCCACGAAACGAGCGTACGGGCGCTC
1 ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * ** *
21999501 AGCCGGCCAGAGGGGCAGGATACACAAG-TCGGGGATCGACCGGGTCCCCTTCTGCGTGCTGTCG
66 AGCCGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCG
* ** * * *
21999565 ATCCTGCTACCATAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTACT-CCTAA
130 ATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTA-TGCCTAA
* * * *
21999629 GCCAACCGACGAAACGAGCAGG-CTGGCAGGCGGGCACTATG-TCGGCCTA-AGTGACGGGATGC
194 GCCAACCGACGAAACGAGC-GGACGGGCGGGCGGGCACTACGCT-GGCC-AGAGAGACGGGATGC
** * **
21999691 GCAAGCCGTTTATCGATAGAGG-GGTAGTTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAA
256 GCAAGCCGTGGATCGATAG-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
* * *
21999755 TGCCATTTTCATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGA
320 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * **
21999820 AAGATGACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTGCGGTTC-AGGATTTTTTAAAA
385 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAA
* * * *
21999884 TTTTTTCGGAAGGA-TTTTTGCTCCCAAACTTGGTATACGTGATCCTTGTGTTTTGGTTGGCATG
449 TTTTTTCGGAAGGAGTTTTGGC-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
* *
21999948 CA-AAAAAAATACAGCTAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-C
513 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * * * *
22000011 CCATTCCAGACACTTTAATGTCTGCTGGCAGCAAACCTGTAAAACCTCAAATACTTTTTAAGGGG
578 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
22000076 GTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCAT
643 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* *
22000141 CGCACATCATTTGCGCACA-----C--ACCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
708 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
* * *
22000199 TTCTCCG-G-CGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCAT
773 TTCTCCGAGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* *
22000262 GTGCTGTAGCAACCCTCGGGTCCGGTTTGATCTTAGACTGGAATGAACT-A
838 GTCCTAT-GCAACCCTC--GT-CGG---G-TC-T---CTGG-AT--ACTCA
* * * * *
22000312 TGTATGCTTAGAGTGGGAATGAAC-CTTGTATGCCTAAGTCAACCCATGAAATGAGCATGCAGGC
1 ---ATGCTTAGACTGGGAATGAACTC-TGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * ** ** *
22000376 GCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGACCGGGTCCCCCTCTGTATGCTA
62 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTG
* * * * * *
22000441 CCGATCCAGCTGCCGTAACTCTCAGT-TCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCC
127 TCGATCCTGCTGCCGCAACCCTCGGTCT-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
22000505 TAAGCCAATCGACGAAATGAGTGGGCGGGCGGGCGGGCACTATG-TCGGCCAGAGAGACGGGATG
191 TAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCT-GGCCAGAGAGACGGGATG
* * * *
22000569 TGCAAGCCGTGGATCGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATGTTTGTGCGTGCCAA
255 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
* *
22000634 TGCCATTTTTATGGCTTGTAAATACATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGC
320 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * *
22000699 AAGACGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTATACGGTTCGGGATTTTTTAAAAT
385 AAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAAT
* * *
22000764 CTTTTCGGAAGGAGTTTTGGCCCCATACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA
450 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
22000829 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCC
515 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
22000893 ATTTCAGACACTTTAATGGCTATTGGCAGCAAACTTGTACAATCTCAAATGCTCTTTAAGGGGGT
580 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
22000958 GTGAGTTCTTGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
645 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
22001023 CACACCATGTGCGCACACCCCCCCCGGCCCCCCCGATC-TCCGGAAGCCCAATGCCGTCGATCAG
710 CACATCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGT-CGGAACCCCAATGCCGTCGGTCAG
** * * *
22001087 GTTCTCCGACGATGATCCGGTGATGGTGCCCCGGTGAAGAATAATGTGGCAGCAGCACATGCCCG
772 GTTCT-C--CGA-GA-----TGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* *** *** *
22001152 AGCCCAGCATGTGCTGCCACAACCCTCGGTTCAATCCAATCTTAGACTGGGAATGAACTCCGT
828 AGCCCAGCATGTCCT-ATGCAACCCTC-G-----TCGGGTC-T---CT-GG-AT--ACT-C-A
* * * *
22001215 ATGCTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGAGCGCTC
1 ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
** *
22001279 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGG-CTGGGTCCCCCTCTACGTGCTG-CT
66 AGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTC-
* ** * *
22001342 GATCCTGCTGCCACAACCCTCAATTCGGGTTCGATCTTAGA-TGGGAATGAACTCCGTATGCCTA
129 GATCCTGCTGCCGCAACCCTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
22001406 AGCCAACCGACGAAATAAGCGAGCGGGA-TGGCGGGCGGGCACTACGCCGGCTAGAGAGACAGGA
193 AGCCAACCGACG--A-AA-CGAGC-GGACGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGA
* * * *
22001470 TGCGCAAGCCGTGGATCGTTAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCATTCC
253 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC
*
22001535 AATGCCATTTTTATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
318 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
** *
22001600 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTC-ATGACTTTTTAA
383 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAA
* **
22001664 AATTTTTTCGGAAAGA-TTTCCAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
447 AATTTTTTCGGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
22001728 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
511 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * * *
22001793 CCCCATTTCAGACACTTTAATTGCTACTGGCAGTAAACCTGTAAAATCTCAAATGGTTTTTAAGG
576 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
*
22001858 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCTGCACCC
641 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* * *
22001923 ATCACACATCATGTGCGCACACCCCCCAGCCCCCCTGATCGTCGGAACCCCAATGCCGTCGGTCA
706 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* *
22001988 AGTTCTCTGACGATGCTCCGATGATGGTGCCCGGACGAAGAAAAATGCGGCACCAGCACATGCCC
771 GGTTCTC---CGA------GATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* * *
22002053 GAGCCTAGCATGTCCTGTGCAA-CC-C-TC-GGTC-C-GG-T-C-CG
827 GAGCCCAGCATGTCCTATGCAACCCTCGTCGGGTCTCTGGATACTCA
* * * * *
22002091 AT-CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCCACGAAACCAGCGTGCGGGCACTC
1 ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * ** * * *
22002155 AGTCGGCTAGAGGGGCGGGATGCGCAAGCTGGGCATCAATCGAGTCCCCCTCTACGTGCTGTTGA
66 AGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
** * * *
22002220 TCCTGCTGTTGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGC
131 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
22002285 CAATCGACG-AA--A-C-GA---GCGGGCGGGCACTACGCT-GCCAGAGTGATGGGATGCGCAAG
196 CAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAG
* * * *
22002341 CCGTGGATCTATAGGGTTGTAGGTGGGTTTAGGCACTTCTTCATATTTCTACGTGCCAATGCCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
*
22002406 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
22002471 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGGGGTTCG-GATTTTTTAAAATTTTTTC
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
* * *
22002535 GGAAGGAGTTTTGGCCCCTAACATGGTAGACGTGATGCTTGTATTTTTGTTGGCATGCACAAAAA
456 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* **
22002600 AATTCAGCTAAAAAATTAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
521 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
22002665 GACACTTTAATTGCTACTGGCAGCAAACCTATAAAATCTCAAATGGTTTTTAAGGGGGTGTGAGT
586 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
22002730 TCTCAAGGTTTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACCTGCACCCATCGCACATC
651 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
*
22002795 ATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGA
716 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* *
22002859 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCTAGCCCAGCA
781 -GA---T-----GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
22002924 TGTCCTATGCAA-CC-C-T-GGGTC-C-GG-T-CT-A
837 TGTCCTATGCAACCCTCGTCGGGTCTCTGGATACTCA
* * *
22002952 AT-CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGGAACGAGCGTACGGGCGCTT
1 ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
22003016 AGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
66 AGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
* * * * * * * *
22003081 TCCTACTGTCACAACACTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAAAC
131 TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
22003146 CAACCGACGAAATGAGCGGACGGGTGGGCGGGCACTACGCTGACCAGAGAGACGGGATGCGCAAG
196 CAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAG
* * * * *
22003211 CCATGGATTGATAGGGTAGTAGGAGAGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
22003276 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* **
22003341 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
* * ** * * *
22003406 AGAAGTAGTTTTTTCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCACGCACAAAAT
456 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
*
22003471 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCA
521 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
22003536 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
586 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
** * * *
22003601 TCTCGAGGTTTGATGAGGGATA-GGGTTCAATATAAAGGCCAAGTACTAGAACCCATCGCACATC
651 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
22003665 ATGTGCGCACACCCCCCCGGCCCCCCCGATCTTCGAAATCCCAATGCCGCCGGTCAGGTTCTCCG
716 ATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
** * ** * * *
22003730 A-A-GATGGTGCCCCGGTGAAGAAAAATGCGGCTCCAGCACATGTTCGAGCCTAGCATGTGCTGC
780 AGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTCCT-A
* *
22003793 CGTAACCCTCAGTCAGGATCGATCTTAGACTGGGAATGAACTCCA
844 TGCAACCCTC-GTC-GG---G-TC-T---CT-GG-AT--ACT-CA
* * *
22003838 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCT
1 -ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
** * * * * **
22003903 CAATCGGCCAGAGGGGCGGGATGCGTAAGCCGAGGATCGG-CTGG-CTCCCCTCTGCGTGCTACC
65 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTC-CCCCTCTGCGTGCTGTC
* * * * * *
22003966 GATCCTGTTGTCGCAACCCTTGGTCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAA
129 GATCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * *
22004031 GCCAACCGACGAAACGAGC-GA---GCGGGCGGGCACTACACCGGCTAGAGAGATGGGATGCGTA
194 GCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCA
* * * ** * * *
22004092 AGCCGTAGATCGATAGGGTGGCAGGTGGGTTTCGAAACAACTTCATATTTTTGCATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
22004157 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
*
22004222 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACCTTTTGCGGTTCGAGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
* * * *
22004287 TTGGATGGAGTTTTCGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGCATGCATAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
22004351 AAAATTCAGCT-ACAACTCGAAGTGTATAAGA-TTTGTGACCATTTGAAAAAAGTATCCCCGTTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
22004414 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * ** * *
22004479 GTTCTTGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGTACCAGTGCCCATCGTAAA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
22004544 TCATGTGTGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
714 TCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * **
22004609 CGATGATGCTTCGGTGATGGTGCCTCGACGAAGAAAAATACAACACCAGCACATGCCCGAGCCCA
778 CGA-GA--------TGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * * *
22004674 GCATATGCTGCTGCAACCCTCAATCCGATCCGATCTTAGACTGGGAATGAACTCCGT
834 GCATGTCCT-ATGCAA-CC-C--T-CG-TCGGGTC-T---CT-GG-AT--ACT-C-A
* *
22004731 ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTC
1 ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
** *
22004796 AGCCGGCCAGAGGGGCGGGATGCGCAAG-TCGAAGATCGGTCGGGTCCCCCTCTACGTGCTG-CT
66 AGCCGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-
* * * * * *
22004859 GATCCTGCTACCGCAACCCTCGGT-TCGGTCTGATCTTAGATTGGGAATGAACTTCGTATGCTTG
129 GATCCTGCTGCCGCAACCCTCGGTCT-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* **
22004923 AGCCAACCGACAAAAACGAGCGGACGGGCGGGCGGGCGGGTGTGCACTG-TGCCTGCCAGAGAGA
193 AGCCAACCGAC-GAAACGAGCGGACGGGCGGGCGGGC---ACT--AC-GCTG---GCCAGAGAGA
* *
22004987 CGGGATGCGCAAGCCATGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
248 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
22005052 GTGCCAATGCCATTTTTATGGCTTGAAAATTCAAACAATGGTCCCTTAAGCCTTCACGTGAAGTT
313 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* ** * * *
22005117 TAATGGTGAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTT
378 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTT
* *
22005182 TTAAAATTTTTTCGAAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
443 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
** * * * * *
22005247 ATATGCATAAAAATATTCAGCTAAACACTCGAAGTGTACAAGATTTTATGACTATTTGAAAAAAG
508 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* * * * *
22005312 TGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACTTATAAAATCTCAGATTCTCTTTA
573 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
*
22005377 AGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
638 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * *
22005442 CCCATCGCACACCATGTGCGCACA-CCCCCTGCCCCCCCGATCGTCGGAACCCCAAT-CTCATCG
703 CCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGC-CGTCG
* * ***
22005505 GTCAGGTTCTTCGACGATGCTCCGGCGATGGTGCCTCGGTAAAGAAAAATGCGGCACCAGCACAT
767 GTCAGGTTC-TC--CGA-GAT-----GATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT
*
22005570 GCTCGAGCCCAGCATGT
823 GCCCGAGCCCAGCATGT
22005587 GCTGTCGTAA
Statistics
Matches: 4582, Mismatches: 521, Indels: 309
0.85 0.10 0.06
Matches are distributed among these distances:
853 3 0.00
856 1 0.00
858 3 0.00
861 339 0.07
862 283 0.06
863 184 0.04
864 19 0.00
865 1 0.00
866 5 0.00
868 3 0.00
869 18 0.00
870 231 0.05
871 226 0.05
872 44 0.01
875 23 0.01
876 151 0.03
877 3 0.00
878 13 0.00
879 426 0.09
880 317 0.07
881 113 0.02
882 23 0.01
883 254 0.06
884 4 0.00
886 5 0.00
887 94 0.02
888 91 0.02
889 37 0.01
890 1 0.00
891 2 0.00
892 173 0.04
893 82 0.02
894 11 0.00
895 2 0.00
896 3 0.00
897 3 0.00
898 12 0.00
899 160 0.03
900 97 0.02
901 6 0.00
902 106 0.02
903 333 0.07
904 141 0.03
906 241 0.05
907 115 0.03
908 19 0.00
909 156 0.03
910 5 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (873 bp):
ATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
AGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGA
TCCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
CAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
GATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTCCTATG
CAACCCTCGTCGGGTCTCTGGATACTCA
Found at i:22003852 original size:26 final size:26
Alignment explanation
Indices: 22003816--22003868 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
22003806 CAGGATCGAT
22003816 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
22003842 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
22003868 C
1 C
22003869 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:22004737 original size:26 final size:26
Alignment explanation
Indices: 22004708--22004760 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
22004698 CCGATCCGAT
22004708 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
22004734 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22004760 C
1 C
22004761 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22005654 original size:26 final size:26
Alignment explanation
Indices: 22005615--22005667 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
22005605 CCAATCCAAT
*
22005615 CTTAGACTGAGAATGAACTTCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
* *
22005641 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
22005667 C
1 C
22005668 CAAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:22006238 original size:26 final size:26
Alignment explanation
Indices: 22006209--22006260 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
22006199 TGGTCTAATT
*
22006209 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
22006235 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
22006261 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:22007154 original size:26 final size:26
Alignment explanation
Indices: 22007118--22007170 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
22007108 CTGATCCAAT
22007118 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22007144 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22007170 C
1 C
22007171 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22009811 original size:26 final size:26
Alignment explanation
Indices: 22009782--22009837 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
22009772 CTGGTTCGAT
*
22009782 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22009808 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22009834 CTTA
1 CTTA
22009838 TGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22010703 original size:26 final size:26
Alignment explanation
Indices: 22010674--22010729 Score: 87
Period size: 26 Copynumber: 2.2 Consensus size: 26
22010664 CCGGTCTGAT
*
22010674 CTTAGACTGGTAATGAAC-TCTGTATG
1 CTTAGACTGGGAATGAACTTC-GTATG
22010700 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
22010726 CTTA
1 CTTA
22010730 TGTCAACCCA
Statistics
Matches: 28, Mismatches: 1, Indels: 2
0.90 0.03 0.06
Matches are distributed among these distances:
26 26 0.93
27 2 0.07
ACGTcount: A:0.27, C:0.16, G:0.23, T:0.34
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:22011337 original size:896 final size:892
Alignment explanation
Indices: 22006137--22023745 Score: 8663
Period size: 873 Copynumber: 19.4 Consensus size: 892
22006127 AAAATCTCGG
* * * * * * * * * *
22006137 CGAAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTG-CCACAACCCTCAGTCTG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGA-AACACTCGGTCCG
* *
22006201 GTCTAATTTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * *
22006266 TCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGTGGGATGCGCAAGCTGGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
* * * * * * * * * ** **
22006331 TCGACCGGGTCCCCCTCTGCGTGCTACTGATCCTGCAGCCACAACCGTC-AGTCCGGTCCCATCT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGA-TCTAGTCTGATCT
** * * * * *
22006395 TAGACTTTGAATGAACTCTGTATGCCTAAGCTAATCGATGAAAGGAGTGGGCTGGCGG-CGGGCG
259 TAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GC--GCGGACGGGCG
* * *
22006459 GGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
318 GACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
**
22006524 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
383 GTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* ** * * *
22006589 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAATTTCTATCTTGCTCGA
448 CAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* ** * * **
22006654 TTTTTGAAACTTTTTGCGGCTCGGGATTTTTT-AAATTTTTTT-GGAAGGAGTTTTGGAACCAAA
513 TTTTCGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAA
* * * * *
22006717 CTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTCAGCCAAAAACTCAAAG
578 CTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
*
22006782 TGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGC
643 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
22006846 AGCAAATCTGTAAAATCTCAAATGCTCTTTAACGGGGTGTGAGTTCTC-AAGGTTTGATGAGGGA
708 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAA-GTTTGATGAGGGA
* * * * * **
22006910 TAGGGAGCCAACATAAGGGCCAGGAATAAGCACCCATCGCACATCATGTGCGCACACCCCCCTCG
772 CAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CG
* * * *
22006975 GCCCCCCCGATCGTCAGAACCCCAATGCCGTCGATCAGGTTCTCCGGCGATGCTCCGGCGATGGT
835 ACCCCCCCGATCGTC-GGACCCCAATG-CGCCGATTAGG---T-------T-CTCCGGC-ATGGT
22007040 GCCCC-A
886 GCCCCGA
* * * * * ** * * * *
22007046 GCAAAGAAAAATACGGCACCAGCACTTGAC-CGAGCCCAACATGTGCTGCCGCAACCCTCGGTCT
1 -CGAAGGAAAATGCGGCACTAGCACATG-CTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCC
* ** *
22007110 GATCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
64 GGTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
22007175 GTCAACCCACGGAACGAGCGTGCGGGCGCTCAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGCG
129 GTCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGG
** * * * *** * * * * *
22007240 ATCAGTCGGGTCCCCCTCTGCATGTTGTTGATCCTACTGCCGCAATCCTCTATC-AGGTTTGATC
194 ATCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTA-GTCTGATC
* * * *
22007304 TTAGACTGGGAATGAACTCTGTATGCCTAAGCGAACCGACGAAACGA--GCGG-CAGGCAGG-CG
258 TTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGC-GGACG
* * * * *
22007365 GGCGGGCACTACGTCAGCCAGAAAGACAGGATGCGCAAGCCGTGGATCGATATGGTGGTAGGTGG
322 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *
22007430 GTTTAGGCACATCTTCATATTTCTGTGTGCCAATACCATTTTTATGGCTTGTAAATTCATACAAT
387 GTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * * * *
22007495 GGTCACTTAAGCCTTCACATGAAGTTTCGTGGCAAGATGAGTCATTTTCTATTTTTCACGACTTT
452 GGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
22007560 CAAAACTTTTTACGGTTTGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
517 CGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
* * *
22007624 GTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACCAAAAAAATTCAGCTAAAAAATCGAAGTGT
582 GCAGACGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGT
*
22007689 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCAGC
646 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
22007754 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
711 AAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGG
* * *
22007819 GGTCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGCACACCCCCCGGCCCCC
776 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCC
* * * * * *
22007884 CCGATCTTCGAAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCG
841 CCGATCGTCG-GACCCCAATG-CGCCGATTAGGTTCT-C--C---G----G-C-ATGGTGCCCCG
22007949 A
892 A
* * * * * * * * *
22007950 TGAAGAAAAATACGGCACCAGCACATGCCCAAGCCTAGCATGTGCTGTC---ACA-AC---CC--
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
*
22008006 TC-AATC-----C---G---G---TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
66 TCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * *
22008054 CAACCCACAAAACAAGCTTGCGGGCGCTCAGCAGGCCAGAAGGGCGGGATGCGCAAGCCGGGGAT
131 CAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGAT
* * * * * * * *
22008119 CGACCGGGTCCCCTTCTGCATGCTACCGATCCTGCTGCCACAACCCTCGGTCCAGTCTGATCTTA
196 CAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTTA
* * * *
22008184 GGC-ATGGAATGACCTCCGTATGCCTAAGCCAACCGACGAAACGA--GCGGATGGGCGGGCGGGC
261 GACTA-GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGGC
* * *
22008246 GGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGAACGATAGGATGGTAGGTGGGTT
325 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*
22008311 TAGGCACATCTTCATATTTCTATGTGCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGGT
390 TAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * * * * *
22008376 CGCTTAAGCCTTCACGTGAAGTTTCATGACAAGACGACACGTTTTCTATTTTTCATGATTTTTGA
455 CCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG-
** * * *
22008441 AAACTTTTTGGGGTTCGGGATTTTTTAAAATTTTTTT-TGAAGGGGTTTTGGCCCCAAACTTGGT
519 AAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGC
*
22008505 AGACGTGATCCTTGTATTTTTGTTGGCATGCACCAAAAAATTCAGCTAAAAACGTCGAAGTGTAA
584 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGT--
22008570 ACAAGATTTTGTGACCATTTGGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTCA
646 ACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG-CA
* * * * *
22008635 GC-AA-TTA-AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTAGAGGTTTGGATGACGGAA
709 GCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTT-GATGA-GGGA
* * * *
22008697 TAGGGGGCCCAATATAA-GGCCAAGTA-TAGTACACATACGCACATCATGTG-GC-CAACCCACC
772 CAGGGGG-CCAATATAAGGGCCAAGTACCAGCACCCAT-CGCACATCATGTGCGCAC-ACCC-CC
* * * * *
22008758 CCAGGCCCCCCGATCGT-GCGAACCCAATGCTACCGGTTAGGTTCTCCGCGCATGGTG-CCCGA
833 CGA-CCCCCCCGATCGTCG-GACCCCAATGC-GCCGATTAGGTTCTCCG-GCATGGTGCCCCGA
* * * * * * *
22008820 TGAAGAAAAATGCGGCACTAGCACTTGC-CGAGCCCAGCATGTGCTGTCGTAACCCTCTGTCCGG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
* *
22008884 TCTGATCTTAGACTGGGAATGAACT-TCGTATGCATAGACTGGGAATGTACTCC-TATGCCTAAG
66 TCTGATCTTAGACTGGGAATGAACTCT-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* ** * * *
22008947 TCAACCCACGAAACAAGCGTGCGGGTGCCCAGTCGGCCAGAGGGGTGAGATGCGCAAGCCAGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
** * * * * * * * * * **
22009012 TCAGTCGGGTCCTCCTCTGCATGCTGCCGATCCTGCTATCGTAACTCTTGGTCTAGTCCAATCTT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTT
* * * * * *
22009077 AGACTGGGAATGAACTCCGTATGCGTAAGCCAACCGACGAAACGAGCG-TG-CGGGCGGGCAGAC
260 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGGC
** *
22009140 GGGCACTACGCCGGCCAGAGAGACAAGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTT
325 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* *
22009205 TAGGCACAACTTCATATTT-T-TGCATGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATG
390 TAGGCACATCTTCATATTTCTATG--TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
22009268 GTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACTATTTTC
453 GTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* ** * *
22009333 AAAACTTTTTAAGGTTTAGGATTTTTT-AAATTTTTTTCAGAAGGTGTTTGGGCCCCAAACTTGG
518 GAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * * * *
22009397 CAGACCTGATCCTTGTATTTTTGTTGGCATGCCCGAAAAAATTCAACTAAAAACACGAAGTGTAC
583 CAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
22009462 AATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGTAGCAA
648 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
22009527 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-CTGAAGTTTGATGAGGGATCAGG
713 ACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-GAAGTTTGATGAGGGA-CAGG
* *
22009591 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCAGGCCCC
776 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GACCCC
* * * *
22009656 TCC-ATCGTCGGAACCCCAATGCCGTCGATTAGGTTCTCCGGTGATAGTGCCCCGA
840 CCCGATCGTCGG-ACCCCAATG-CGCCGATTAGGTTCTCCGG-CATGGTGCCCCGA
* * *
22009711 CGAAGGAAAATGCGGCACCAGCACATGCTCGAGCCCAGTATGTGCTGCCGAAACACTCGGTCTGG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
* *
22009776 T-TCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCTTATG
66 TCT-GATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
22009840 TCAACCCACGAAACGAGCGTGCGTGCGATCAGCCGGCCAGAGGGGCAAGATGCGCAAGCCGGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
* *
22009905 TCAACCGAGTCCCCCTCTACGTGCTACCGAT-CTAGCTGTCGCAACCCTCGATCTGGTCTGATCT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCT-GCTGTCGCAACCCTCGATCTAGTCTGATCT
* * * * * *
22009969 TAGACTGGGAATGAACTCCATAAGCCTAAGCCAAGCGATGAAACGAGCG-GG-CAGGCGGACGGG
259 TAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGG
* * * *
22010032 TGGGCACTATGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATAGATAGGGTGGTAGGTGGGT
324 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
22010097 TTAGGCACATCTTCATATTTATGTGTGCCAATGCCATTTTTATAGCTTGTAAATTCATACAATGG
389 TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
22010162 TCCCTTAATCCTTCACATGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCACGATTTTCG
454 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
*
22010227 AAACTTTTTATGGTTCGGGATTTTTTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGC
519 AAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGC
* * *
22010291 AGACGTGATCCTTTTATTTTTGTTGGCATGCCCAAAAAAATTCAGCTAAAAACCCGAAGTGTACA
584 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
22010356 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
649 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
22010421 CCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGGG
714 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGGG
*
22010486 CCAATATAAGGGCCAAGTATCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCG
779 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCG
*
22010551 ATCGTCGGTACCCCAATGTCGCCGATCAGGTTCTCCGGCAATGGTGCCCCGA
844 ATCGTCGG-ACCCCAATG-CGCCGATTAGGTTCTCCGGC-ATGGTGCCCCGA
* * *
22010603 CGAAGGAAAATACGGCACTAGGACATGCTCGAGCCCAGTATGTGCTGTCGGAACACTCGGTCCGG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
* * * *
22010668 TCTGATCTTAGACTGGTAATGAACTCTGTATGCTTAGACTGGGAATGAACTTCGTATGCTTATGT
66 TCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * *
22010733 CAACCCACGAAACGAGCGTGCGTGCGATCAACCGGCCAGAGGGGTGGGATACGCAAGCCGGGGAT
131 CAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGAT
* * * *
22010798 CAACCGAGTCCCCCTCTACGTGCTACCCATCTTGCTGTCGCAACCCTCGATCTGGTCTGATCTTA
196 CAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTTA
*
22010863 GACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGTGCGGACGGGCGGACGGG
261 GACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--GCGGACGGGCGGACGGG
* * *
22010928 CGGGCACTACGTCGGCCAGAGAGACGGGATGCGGAAGGCGTGGATCGATAGGGTGGTAGGTGGGT
324 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
22010993 TTAGCCACATCTTTATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
389 TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
22011058 TCCCTTAAGCCTTCACATGAATTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
454 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
* * *
22011123 AAACTTTTTAAGGTT-GGAGATTTTTTAAAACTTTTTTGA-AAGGAGTTTTGGCCCTAAACTTGG
519 AAACTTTTTAAGGTTCGG-GATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
22011186 TAAACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTAC
583 CAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* **
22011251 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCTAGACACTTTAATTGCTACTGGCATTA
648 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCA
*
22011315 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-AAGGTTTGATGAGGGATAGG
712 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAA-GTTTGATGAGGGACAGG
* * **
22011379 GGGCCAATATAATGACCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTTTCGGT
776 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC---CGAC
* * * * * * * * ** *
22011444 CCCCCTGATCGCCGTAATCCCAATTCCGCCGGTCAGGTTCTCCGGCGATGGCGCCATGG
837 CCCCCCGATCGTCG-GACCCCAA-TGCGCCGATTAGGTTCTCCGGC-ATGGTGCCCCGA
* * * * * * * * *
22011503 CGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGTATATGCTGCCGCAACCCTCGGTCTGG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTC-CG
** * * * * ** **** * ** *
22011568 TGCTCCGGTGATGGT-GCACTAGCGAA-GAACACTCGTTTTCTATATTTCATGATTTTTAAAACT
65 -G-T-C--TGATCTTAG-ACT-GGGAATGAACTCT-GTATGCT-TA-GAC-TGGGAATGAACTCC
* * * ** ** ******* ****** * * ** * *
22011631 TTTTGCGGTTGGGGATTTTTTAAAATTTTTTTG-GAAGGAGTTTTGGCC--CAAAAGTTGGTAGA
119 GTATGC-CTAAGTCAACCCACGAAACAAGCGTGCG--GGCG-ATCAGCCGGCCAGAG--GG--G-
* * **** * *** * * **
22011693 C-ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGA-AGTG-TACA
175 CGA-GATGC--GCA-AGCCG--GGGAT---CAACCGAGTCCCCCT-----C-T-ACA-TGCTAC-
** ** * * *** * *
22011755 AAATTTTG-TGACCATTTGAAAAAAGTGTCCGCAT-T--TCAGACACTTTAATGGCTACTGGCAG
222 CGATCCTGCTG-----TCG---CAACCCT-CG-ATCTAGTCTGA-TC-TT-A--G--ACT---AG
* * ** * ****** *** ** * *
22011816 CAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGA-GTTCCTGAG-GTTTGATGAG-GGA
267 -GAA--TG--AACTC-CGTATGC---CTAA-GCCAACCGACGAAAC-GAGCG-CGGACGGGCGGA
* * **** * ** * * * ***
22011878 CAGGG-GGCCAATATAAGGGCCAAGTACCAGCAC-CCAT-CGCACATCATGTGTGCACACCCCCC
320 C-GGGCGGGCACTACGCCGGCC-AG-A-GAG-ACGGGATGCGCA-AGC-CGTG-G---A-TCGAT
*** * * * ** * ** *
22011940 AGGCCCCCCCG-ATCGTCGG--AACCCCAACGTCACCGATCAGGTTCTCCGATGATGGTGCCCCA
373 AGG----GTGGTA-GGTGGGTTTA-GGC-ACATCTTC-AT-A--TT-T-C--T-AT-GTG-CCAA
* ***** ** * * * * *
22012002 -GCGAAGAAAAAT-GC--G-GCA-CCA-GCACAT-G-CCC--GAGCC--CAGCATG-TGCTGTC-
420 TGC-CATTTTTATGGCTTGTAAATTCATACA-ATGGTCCCTTAAGCCTTCA-CATGAAG-TTTCA
* ** * * * * ** * *** * *
22012052 -GG--A-AC-CCTCGGTCCGGTCCAATCTT-A-GACTGGCAATGAACTCCGTAAGCATAGACTGG
481 TGGCAAGACGACTC-GT--TTTCTATTTTTCACGATTTTCGA--AACTTTTTAAG-GT--TC-GG
*** * ***** * **
22012110 GAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGCGCTCCGCCAGCCAAAAG
537 G-AT----TT--T-T-TAAAATTTTTTTCA-G-AA-G-GAGT-T------TTGGCC--CC-AAA-
* * * * ***** * ** *** * *
22012175 GGCGGGATGGGCAAGCCGGGGATCGAC-CG-AGTCCCCCTCT-GCGTGCTAC-CGATCCTGCTGC
578 --C----TTGGC-AGAC-GTGATC--CTTGTA-TTTTTGT-TGGCATGC-ACAAAAAAATTCAG-
** ** * * * ** ** * * * ***
22012236 CGCAACCCTC--AGTCTGGT-CTA-ATCTT-AGA-C-TGGGAATGAACTCCGTATGCCTAAACCA
629 CTAAAAACTCGAAG--T-GTACAAGATTTTGTGACCATTTGAA--AA--AAGTGTCCCCATTTCA
*** * ** * * * * * *
22012294 -ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACCACGTCGGCCAAAGAGACGGGATGCGCAAGC
687 GA-C-ACTTTA--A--TGGC-TACTGGC-AGCA--A--AC--CTATA-A-A----AT-CTCAA--
* ** * * * ** ***
22012358 CATGGATCGAT-AGGGTGGTAGTGGGTT-TAGGCACA-TCTTCAT-ATTTCTG-CATGCCAATGC
729 -AT-GCTCTTTAAGGG-GGT-GTGAGTTCT-CG-A-AGT-TTGATGA---GGGACA-G--GGGGC
* * * ** * * ** * * * * * ** **
22012418 CATTTTTATGGCTTGTAAATTCAAACAATGGTCCCTTAAGC-CTTCACGTGAAGTTTCATGGCAA
780 CA-ATATAAGG---GCCAAGT---ACCA-GCACCCAT-CGCACATCATGTG-CG---CA-CACCC
** **** * ** * **** **** * ****
22012482 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATT-TCTTAAAAT-
831 CCCGAC-C-CCCCCGA-TCGTC-GGA---CCCCAA--TGCGCCGATT-AGG-TTCTC-CGGCATG
* **
22012545 TTG-TTCGA
884 GTGCCCCGA
** ** * * * * * * ** * * * *
22012553 --AA-GAAGTTTTGGCCCCA-AACTTGGTAGTCGTGATCCTTGTATTTTTTTGGCAAGCACAAAA
1 CGAAGGAAAATGCGGCACTAGCACAT-G--CTC--GAGCCCAGTA----TGT-GC-TG-TC-GAA
* * * ***** * *** ***
22012614 AAATTCAGCTAAAAACTCGAAGT-TTACAAGATTCTGTGACCATTTGAAAAAAGTGTCCCCATTC
53 ACACTC-GGTCCGGTCT-G-A-TCTT---AGA--CTGGGA--A--TG--AACTCTGTATGC-TT-
** * * * * * ** * **** * *** * *
22012678 CAGACACT-TTAATG-GCTACTGGCA-GCAAACT-TGTAAAATCTC-AAATGCTCTTTAAGGAGG
101 -AG--ACTGGGAATGAACT-C-CGTATGC---CTAAGTCAACCCACGAAACAAGCGTGCGGGCGA
** * * * *** * * *** * ***
22012738 TGTG-AGTTCTC-GATGTTTGATGA-G-GGATAG--GGGG-CCAATATAAGGGCCAAATACTAGC
158 TCAGCCG-GC-CAGAGGGGCGA-GATGCGCA-AGCCGGGGATCAA-CCGA-GTCCCCCT-CTA-C
** * * **** * ** ***
22012796 ACCCATCACAC-ATCATG-TG-CGCAGACCCCCCCGA-CCCCCCCGATCGTCGGAAC-CCCAATG
215 ATGC-T-AC-CGATCCTGCTGTCGCA-A--CCCTCGATCTAGTCTGATC-TTAG-ACTAGGAATG
* * * * ** * * * ** * * * ****
22012856 CCAC-CGGTCAGGTTCTCCGACGATGCTCCAACG-ATGGTGCCCCGACGAAGAAAAATACGGTGC
272 -AACTCCGT-ATG-CCTAAG-CCA---ACCGACGAAACGAGCGCGGACG--G--GCGGACGG-GC
** * * * * * * * *
22012919 CAGCAC-ATCCCCGAGCC-TAG-CATGTGCTACCGCAACCCTCGGTCTGG-TCTGATCTAGATCG
325 GGGCACTA-CGCCG-GCCAGAGAGACGGGAT-GCGCAA-GC-C-G--TGGATC-GA--TAG---G
** *** * * * * * * * * ***
22012980 GAATGAAACTCCGTACTGACGGGGAAAGGAAAAACTCCCGTA-TGCTAAGT--CAA-CCCA-CGA
376 G--TG-------GTA--GGTGGGTTTAGGCACATCT-TCATATTTCTATGTGCCAATGCCATTTT
* * * *** * * * * ** ** * * *
22013040 AATGAACGTGCGGGCACTCAGTCGACTAGAGGGGCGGGATGCGCAAGCCGTGGATCGGTCAGGTC
429 TATG-GC-T-TGTAAATTCA-T--AC-A-ATGGTC-----CCTTAAGCC-TTCA-C-ATGAAGT-
* * * * * ** ** *** * * * * ****
22013105 CCTCTCTACGTGC-TGGCGATCTTGGTACCCCTCGGTC-CGGTTCGATCCTAGACTGAGAAATGA
477 --T-TC-ATG-GCAAGACGA-CTCGTTTTCTATTTTTCACGATT---TTCGAAACTTTTTAA-G-
* * ** * *** *** * * * ** * *
22013168 ACTTC-CGA-TGCTAAAGCCAATCGATGAAACGCACGGGCGGATCGGGCGGCGCACAACGCTGGC
531 -GTTCGGGATTTTTTAA---AATTTTTTTCA-G-A-AGG-AGTTTTGGC--CCCA-AAC-TTGGC
* * ** * ** ** * *
22013231 AGAAGACGGGATGCGTAACCGTGGATCGATAGGGTGGTAGGTGGGTTTGGCACATCTTCATATTT
584 ---AGAC--G-T--G-ATCC-T---T-G-TA---T-TTTTGTTGGCAT-GCACA---AAAAAATT
* ** * * *** * * * *
22013296 CTGC---ATGC-C-AA-TG-CCAATTATTTATGGCTTGGGTAATTCATACAA-T-TCTCCC--TT
626 CAGCTAAAAACTCGAAGTGTACAA-GATTT-T-G--TGACCATTTGAAAAAAGTGTC-CCCATTT
* * * * * ** * * ** * *
22013350 AAG-C-CTTCACGTGAAGTTTCATGGCAAGCCGACTCGTTTTCTATTTTTCACTATTTTTGAACT
685 CAGACACTTTA-ATG--GCTAC-TGGC-AGCAAAC-C--TAT-AAAATCTCA--A---ATG--CT
* ** * * ** * * * ** * * ** * **
22013413 TTTTTCGGAAGGATTTTTG-GCCCCAAACTTG--GA-AGACA-TGATCCTTGAATTTTTGTTGG-
734 CTTTAAGG--GGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGGGCC---AATATAAG--GGC
* * * ** * * ** * ****** **** ****
22013472 CATGCA-CA-AAAACATTCAGCTAAAAAATCGAAGTGTACAAAATTTTGTGA-CCATTTGAAAAA
792 CAAGTACCAGCACCCA-TC-GC----ACATC-ATGTGCGC-ACACCCCCCGACCCCCCCGATCGT
* * * * * ** **** *
22013534 AGTGTCCCCATTTCAGACAC-TTTAATGG--CTACTAGCA--GCAAACCTA
849 CG-GACCCCAATGC-G-C-CGATT-A-GGTTCT-CCGGCATGGTGCCCCGA
** ** * ** **** * * * * **
22013580 TAAAATATCAAATGC-TCTTTAAGGGGGTG-T-GAGTTCTCCAGGT-T-TGATG-AGAGATA-GG
1 CGAAGGA--AAATGCGGCACT-AGCACATGCTCGAG--C-CCA-GTATGTGCTGTCGAAACACTC
* ** * ** ** ** * * ** * ******* *
22013638 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG--TGCGCACACCCCCCCGGCC
59 GGTCCGGTCT--GATCTTAG-ACTGGGA---AT-GAAC-TC-TGTATGCTTAGACTGGGAATG-A
* * ** * ** ** * * *
22013701 CCCCCG-AT-CTCTGGAACCCCAATGCCACCGGTTAGGTTCTCCGCGATGCTCCGGTGATGCTGC
114 ACTCCGTATGC-CT--AA-GTCAA-CCCA-C-G--A--AAC-AAGCG-TG--CGGGCGAT-CAGC
* * ** ** * * * * * ** **
22013764 C--CCGGTGAAGAAAAATGTGGC-A-CC-AGCA-CATGCCTGAG--CCCAGC-ATGTGCTACCGC
163 CGGCCAGAGGGGCGAGATG-CGCAAGCCGGGGATCA-ACC-GAGTCCCCCTCTACATGCTACCG-
* * * * * * * *
22013820 AACCAT-CGGTCCGGTCCGATCTTAGA-CTGGGAATGATCTCTGTATGCTTACACTGGGAATGAA
224 ATCC-TGCTGT-C-G--CAACCCTCGATCT----A-G---TCTG-AT-CTTAGACTAGGAATGAA
* ** * ** ** * * ** ** * *
22013883 CTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGG
274 CTCCGTATGCCTA-A----G-CCAACCGACG-A-AAC-GAG-C-GCGGACG-GGCGGACGGGCGG
* ** * * *
22013948 GCGCT-CAGCCGGGTAGAGGGGCGGGATGCGCAAGCTGTGGAATCGATAGGGTTGGTAGGTGGGT
327 GCACTAC-GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG-ATCGATAGGG-TGGTAGGTGGG-
* * *
22014012 TTTAGGCCACATCTTCATATTTCTGCATG-GCCAATGCCATTTTTATGGCGTGTAAATACATAAA
388 TTTAGG-CACATCTTCATATTTCT--ATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
22014076 ATGGTCCTTTAAGCCTTCACGCTGAATGTTTTATGGCAAGACGACTCCGTTTTCTATTTTTC-C-
450 ATGGTCCCTTAAGCCTTCAC-ATGAA-GTTTCATGGCAAGACGACT-CGTTTTCTATTTTTCACG
* *
22014139 A---T-G--A---TTT----TT---G--------AAACTTTTTTCGGAAGG-GTTTTTGGCCCCA
512 ATTTTCGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAG-TTTTGGCCCCA
***
22014179 AACTTTTTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
576 AACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
22014244 AGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCACCATTTCAGACACTTTAATGGCTATTG
641 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
** * * * *
22014309 TTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGATTGATGAGGG
706 GCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGG
* * *
22014374 ATAGGGGGCCAATATAAGGGCCAAGTACAAACA-CCATCGCACATCATGTGCGCACA-CCCCC-A
771 ACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGA
* * * *
22014436 ACCCCCCGATCGTCGGAACCCCAATGTCGTCGGTCAGGTTCTTCGTCGATGCTCTGGCGATGGTG
836 CCCCCCCGATCGTCGG-ACCCCAATG-CGCCGATTAGG----T--TC--T-C-C-GGC-ATGGTG
*
22014501 CCCCGG
887 CCCCGA
* * * * * * * * * *
22014507 TGAAGAAAAATGCGGCACCAGCACATGCCCAATCCCAGCATGTGCTG-CTGCAACCCTCAGTCCG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTC-GAAACACTCGGTCCG
* ** * *
22014571 ATCCCATCTTAGACTGGGAATTAACTCCGT-TCGCTTAGACTGGGAATGAACTCCGTATGCCTAA
65 GTCTGATCTTAGACTGGGAATGAACTCTGTAT-GCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * * * * *
22014635 GTTAACCCATGAAACGAGCGTGCGGGC-ACTCATCCAGCCAGAGGGGCGGGATGCACAAACTGAG
129 GTCAACCCACGAAACAAGCGTGCGGGCGA-TCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGG
* * * * * * * ** * * *
22014699 G-TCGATCGGGTCCCTCTC-AGCGTGCTGCCAATCCTGCTACCTCAACCCTCAGTTC-GGTCTGA
193 GATCAACCGAGTCCCCCTCTA-CATGCTACCGATCCTGCTGTCGCAACCCTC-GATCTAGTCTGA
* * *
22014761 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCGAACCGACGAAAC-A----AG-CGGGC--A-
256 TCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGAC
* * *
22014817 -GGCGGGCACTTTACG--GGCCAGAGAGATGGGAAGCGCAAGCCGTGGATCGATACGGTGGTAGG
321 GGGCGGGCAC--TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
22014879 TGGGTTTAGGTACATCTTCATATTTTTATGTGCCAATGCCACTTTTATGGCTTGTAAATTCATAC
384 TGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * * *
22014944 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTTTATTTTTCATGAT
449 AATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * ** * *
22015009 TTTTGAATCTTTTTGCGGTTTGGGATTTTTTAAAA-TTTTTTC-GAAAGGATTTTTGGCCCCAAA
514 TTTCGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAG-AAGGAGTTTTGGCCCCAAA
* *
22015072 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAG
578 CTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* * * *
22015137 TGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAAACACTTTAATAGCTCCTGGC
643 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * * * *
22015202 AGCAAACCTGTAAAATCTCTAATGTTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
708 AGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGAC
* *
22015267 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCATGTGCGCACACCCCCCGGCC
773 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACC
* * * * *
22015332 CCCCTGATCGTCAGAACCTCAATGCCGCCGGTCAGGTTCTCCAATGATGTTCCGACGATGGTGCC
838 CCCCCGATCGTC-GGACCCCAATG-CGCCGATTAGGTTCTCC------G----G-C-ATGGTGCC
*
22015397 CCGG
889 CCGA
* ** * * * * *
22015401 CGAAGAAAAATGTAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG-CA-AC-C-GT-C-G
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
*
22015460 ---G-TC-----C--GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCAGTATGCCTAAGT
66 TCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* ** ** * * * * * *
22015505 CAACCCACAAAATGAGCGTATGGGCGTTCAACCGGCCAGAGGGGCGGGATGCGTAAACCCGGGAT
131 CAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGAT
* * * * ** * * * * **
22015570 CGACCGGGTCCCCCTCTACGTGTTGTCGATCCTGCTGCCGCAACCCTTGGTC-CGATCCCATCTT
196 CAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAG-TCTGATCTT
* * ** * * * * * *
22015634 AGA-TTGGAAATAAACTTTGTATGCCTATGCCAACCAACAAAACGAGTGC-G-CGGGCGGGCGGC
260 AGACTAGG-AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGG
* * * *
22015696 CGGGCACTACGCCGACTAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGT
324 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
22015761 TTAGGCACATCTTCATATTTCTACGTGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGG
389 TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
22015826 TCCCTTAAGCGTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTCTATTTTTGACGATTTTC
454 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCG-TTTTCTATTTTTCACGATTTTC
* * * *
22015891 AAAACTTTTTGCA-GTTCAGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
518 GAAACTTTTT-AAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTG
* * * * *
22015954 GTAGACGTGATCCCTGTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTA
582 GCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
22016019 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
647 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * * *
22016084 AACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGCGAGTTCTCGAGGTTTGATGACGGATAGGG
712 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGG
* * * *
22016148 GGCCAATATAAGGGCCAAGTACCAGCACCCATTGTACATCATGTGCGCACACTCCCCTGGCCCCC
777 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCGACCCCC
* *
22016213 CAGATCGTCGGAACCCCAATGC-CACCAGTTAGGTTCTCCGATGATGCTCCGACGATGGTGCCCC
841 CCGATCGTCGG-ACCCCAATGCGC-CGA-TTAGGTTCTCC------G----G-C-ATGGTGCCCC
22016277 GA
891 GA
* * * * * * * *
22016279 CGAAGAAAAATGCAGTACCAGCACATGCCCGAGCCCAGCATGTGCT-ACTGCAAC-C-C--T-C-
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTC-GAAACACTCGGTCCG
*
22016337 G---G---TT---C---G-AT--A--C--TAT-CTTAGATTGGGAATGAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * *
22016382 TCAACCCACGGAACGAGCATGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
* * * * ** * *
22016447 TCGACC-AGGTCCCCCAT-TGCGTGCTACCGATCCTACTACCACAACCCTC-AGTCCCA-TCTGA
195 TCAACCGA-GTCCCCC-TCTACATGCTACCGATCCTGCTGTCGCAACCCTCGA-T-CTAGTCTGA
* * * * *
22016508 TCTTAGACTGGGAATGAACTCTGTATGGCTAAGCCAACCGACGAAATGA------ACGGGCGGGC
256 TCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGAC
*
22016567 GGGTGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
321 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * ***
22016632 GGTTTAGGCATATCTTTATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
386 GGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * *
22016697 TGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTT
451 TGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * * *
22016762 TCAAAATTTTTTACGGTTCGGGATTTTTTTAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
516 TCGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTT
*** * * *
22016826 CATAGACTTGATCAC-TGTATTTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGT
581 GGCAGACGTGATC-CTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* * *
22016890 GTACAAGATTTTGTGACCATTTGAAAAAAGTATCCCCATTTCAAACACTTTAATGGCTACTGACA
644 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * * *
22016955 GCAAACCTGTAAAATATCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
709 GCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACA
** * *
22017020 GGGGGCCAATATAAGGGCCAAGTAATAGCACCCATCGCACATCATGTGCGTACACCCCCCCCG-G
774 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCCGAC
* ** * * * *
22017084 CCCCCCAATCACCTGAACCCCAATGCCGCCGGGCAGGTTCTCCGACGATGCTCCGGTGATGGTGC
837 CCCCCCGATCGTC-GGACCCCAATG-CGCC--G-A---T-T---A-GGTTCTCCGG-CATGGTGC
*
22017149 CTCGA
888 CCCGA
* * * * * * * * * * *
22017154 TGAAGAAAAATGCGGCCCCAGCACATGCCCGAGCCCAGCATGGGATG-CTGTAACCCTCGGTCTG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTC-GAAACACTCGGTCCG
** *
22017218 GTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * *
22017283 TCAACCCACAAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGTAAGTCGGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
* * * * *** * * * * * *
22017348 TCGATCGGGTCCCTCTCTGTGTGCTGCCAATACTCCTGCCGCAACCCTC-AGTCTGATTC-GATC
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGA-TCT-AGTCTGATC
* * * * *
22017411 TTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAAC-A------A-GTG-GG-CCG
258 TTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGG
* * *
22017466 GCAGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGTCGTGGATCGATAGGGTGGTAGGTGGG
323 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
22017531 TTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
388 TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
22017596 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTGTTCATGATTTTT
453 GTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * *
22017661 GAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTT-GGAAGGAG---T-----CTAACTTGG
518 GAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
22017717 TAGACGTGATCCTTGTATTTTTGCTGGCATGCATAAAAAAATTTAGCTAAAAACTCGAAGTGTAC
583 CAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
22017782 AAGAGTTTGTGACCATTTGACAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCA
648 AAGATTTTGTGACCATTTGA-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * * * *
22017847 AACTTGTAATATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGT
712 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGG
* *
22017912 GGCCAATATAAGGGCCAACTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCCGA-CCCC
777 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACCCCC
* * * * * *
22017976 CTGATCATCGGAACCCCAATGCCGCCGGTCAGATTCTCCGACGATGCTCCGACGATGGTGCCCTG
841 CCGATCGTCGG-ACCCCAATG-CG-C---C-GA-T-T---A-GGTTCTCCGGC-ATGGTGCCCCG
22018041 A
892 A
* * * * * * * * **
22018042 CGAAGAAAAATGTGGCACCAACACATGCCCGAGTCCAGCATGTGCTGTCGTAATC-CTCAATCCG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCG-AAACACTCGGTCCG
* * * * *
22018106 GTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATCCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * **
22018171 TCAACCCACGAAACGAA-CGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGTAAGTCAAGG
130 TCAACCCACGAAAC-AAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGG
* * * *** * * * * * * *
22018235 ATCGATCGGGTCCCCCTCTGTGTGCTATCGATACTACTGCCGTAACCCTCGGTCTGGTCTGATCT
194 ATCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCT
* * * *
22018300 TAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAACAAGCG-GG-CGGGC--A----
259 TAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGG
* * *
22018357 --GGCACTACGCTGGCCAGAGAGACGGGATGCGTAAGCCATGG-TCGATAGGGTGGTAGGTGGGT
324 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
22018419 TTAGGCACATCTTCATATTTCTGTGTGCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGG
389 TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
22018484 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTTCATGATTTTCG
454 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
* * * * * *
22018549 AAAC-TTTTACGGTTCAGGATTTTTTAAAA-TCTTTTCGGAAGGATTTTTGGCCCCAAACTTGGT
519 AAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGC
22018612 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
584 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
22018677 AGATTTTGAGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
649 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * * *
22018742 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGATTTCTCGAGGTTTGATGAGGGATAGGAGG
714 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGGG
* * * * * * *
22018807 CCAATATAAGGGCCAAATACCAGCACCCATCGCATATCATGTGTGCAGACCCCGCGGCCCCCACG
779 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCG
* * * ** *
22018872 ATCGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTCGGCGATGCTCCGGTGGTGGTGCCCCGG
844 ATCGTCGG-ACCCCAATG-CG-C---C--G--ATT-AG-G-TTCTCCGG-CATGGTGCCCCGA
* * * * * *
22018935 TGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTC-ACAACCCTCGGTCTG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGA-AACACTCGGTCCG
* ** * * *
22018999 GTCCGATCTTAGACTGGGAATGAACTCCATTTGCTTAGACTAGGAATGAACTCCATATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
22019064 TCAACCCACGAAACGAGCGTGC-GGC-ACTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCTGGGG
130 TCAACCCACGAAACAAGCGTGCGGGCGA-TCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGG
**** * * * ** * * * ** **
22019127 AAT-GGTTGGGTCCCTCTCTACGTGCTGTCGATCCTGCTATCGTAACCCTCGGTCCGGTCCAATC
194 -ATCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATC
* * * * * * *
22019191 TTAGACTGGGAATGAAATCCATATGCCTAAGCCAACCGATGAAACGAGC-TGG-CAGGCGGGCGG
258 TTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGG
* * * *
22019254 ACGGGCGCTACGTCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
323 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* ***
22019319 TTTTAGGCACATCTTGATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
388 -TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
22019384 GTTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTCTTCTATTTTTCACGATTTT
452 GGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * *
22019449 CAAAACTTTTTGTA-GTTAGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCAAAACTT
517 CGAAACTTTTT-AAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTT
* * * ** *
22019512 GGTAGACGTGATCCTTGTATTTTTTTTGGCATCCGTAAAAAAATTCAGCTAAAAAATCGAAGTGT
581 GGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* * *
22019577 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACGGGCAGA
646 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * * *
22019642 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGG
711 AAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGG
* *
22019707 GGGACAATATAAGGG-CAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCACCCG--GCC
776 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGACCCC
* * * *
22019769 CCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGTCCC
840 CCCGATCGTCGG-ACCCCAATG-CGCCGATTAGGTTC-TC--C---G----G-C-ATGGTGCCCC
22019834 GA
891 GA
** * * * * * * * *
22019836 TAAAGAAAAATGCGGCACCAGCACCTGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGT
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
** * ** * *
22019901 TCCAATCTCAGACTGGGAATGAACTTCT-TATGCTTAGACAAGGAATGAACTCCCTAAGCCTAAG
66 TCTGATCTTAGACTGGGAATGAAC-TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * *
22019965 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCTGAGGGGTGGGATGCACAAGCCAGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
*** * * * * * * * * * *
22020030 TCGGTCGGGTCCCCCTCTGCATGCTGCCAATCTTGCTGCCGTAACACTCGGTCTGGT-TCGATCT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCT-GATCT
* * * * * *
22020094 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACGAGTG-GG-CGGACGGGCGGG
259 TAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGG
* * * * * * *
22020157 TGAGCACTACGTCGGCCAGAAAGACGGGACGCACAAGCCGTGGATCGATAGGGTGGTAGGTTGGT
324 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *** *
22020222 TTAGGCACATCTTGATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGT
389 TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
22020287 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTCTTCTATTTTTCACGATTTTCA
454 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
* * * *
22020352 AAACTTTTTGTA-GTTAGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCAAAACTTGG
519 AAACTTTTT-AAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGG
* * * **
22020415 TAGACGTGATCCTTGTATTTTTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
583 CAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* ** *
22020480 AAGATTTTGCGACCATTTGAAAAAAGTAACCTCATTTCAGACACTTTAATGGCTACTGGCAGCAA
648 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * * *
22020545 GCCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCTAGGTTTGATGAGGGATAGGGG
713 ACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGG
* * **
22020610 GCCAGTATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGCACACCCCACCGGGCCCCC
778 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGACCCCCC
* *
22020675 CGATCGTCGGAACCCCAATGCCACCGGTTAGGTTCTCCGGCGATGCTCCAACGATGCTACCCCGA
842 CGATCGTCGG-ACCCCAATG-CGCCGATTAGGTTCTCCGGC-ATG-------G-TG---CCCCGA
* * * ** * *
22020740 CGAAGAAAAATGCGGCACCAGCACATGC-CTGAGCCCAGCATGTGCTACCGCAAC-C-C--T-CA
1 CGAAGGAAAATGCGGCACTAGCACATGCTC-GAGCCCAGTATGTGCTGTCGAAACACTCGGTCCG
*
22020799 GTC----C----A----G--T---C-C--AAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * * * *
22020843 TCAACCCACGAAACGAGCGTGCGAGTGCTCAGCCGGGCAGAAGGGCGGGTTGCACAAGCCAGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
** * * * * * * * * * **
22020908 TTGACTGGGTCCCCCTCTGCATGCTATCAATCCTACTGCCGCCACCCTCGTTCCGGTCTGATCTT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTT
* * * *
22020973 AGACTGGGAATGAACTCCGTATGCCTAAGCTAATCGACG-AACGATCG-GG-C--G-GG-CGGGC
260 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGGC
* * *
22021031 GGGCACTACGTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTT
325 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*** ***
22021096 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAACAAT
390 TAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * *
22021161 CCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAA
455 CCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGA
* * *
22021226 AACTTTTTACA-GTTGGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
520 AACTTTTTA-AGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGC
* * **
22021289 AGACGTGATCCTTGTATTTTTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
584 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* ** * *
22021354 AGATTTTGCGACCATTTGAAAAAAGTAACCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAG
649 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * *
22021419 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCTAGGTTTGATGAGGGATAGGGGG
714 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGGG
* * **
22021484 CCAGTATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGCACACCCCACCGGGCCCCCC
779 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGACCCCCCC
* *
22021549 GATCGTCGGAACCCCAATGCCACCGGTTAGGTTCTCCGGCGATGCTCCAACGATGCTACCCCGA
843 GATCGTCGG-ACCCCAATG-CGCCGATTAGGTTCTCCGGC-ATG-------G-TG---CCCCGA
* * * ** * *
22021613 CGAAGAAAAATGCGGCACCAGCACATGC-CTGAGCCCAGCATGTGCTACCGCAAC-C-C--T-CA
1 CGAAGGAAAATGCGGCACTAGCACATGCTC-GAGCCCAGTATGTGCTGTCGAAACACTCGGTCCG
*
22021672 GTC----C----A----G--T---C-C--AAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * *
22021716 TCAACCCACGAAACGAGCGTGCGAGTGCTCAGCCGGGCAGAGGGGCGGGATGCACAAGCCAGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
** * * * * * * ** * * * **
22021781 TTGACTGGGTCCCCCTCTGCATGCTATCAATCCTACTACCGCCACCATCGTTCCGGTCTGATCTT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTT
* * * *
22021846 AGACTGGGAATGAACTTCGTATGCCTAAGCTAACCGACG-AACGATCG-GG-C--G-GG-CGGGC
260 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGGC
* * *
22021904 GGGCACTACGCCAGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTT
325 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
***
22021969 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
390 TAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * * * *
22022034 CTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATCTTTCACGATTTTCAA
455 CCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGA
*** * * * *
22022099 AACTTTTTGCTGTTCGGGATTTTTT-AAACTTTTTTCGGAAGGAGTTTTGGCCCCACACTTGGTA
520 AACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGCA
* * * *
22022163 GACATGATCATTGTATTTTTTTTGGCATGGA-AAAAAAATTCAGCTAAAAACTCGAAGTGTA-AG
585 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA-
** * *
22022226 AGATTTTGTGACCATTTGAAAAAAGTAACCCCATTTTAGACACTATAATGGCTACTGGCAGCAAA
649 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * * *
22022291 CCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCCG-GGTTTGATGAGGGATAAGGG
714 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-CGAAGTTTGATGAGGGACAGGGG
* * *
22022355 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCCGGCCCCTC
778 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACCCCCC
* * * * * *
22022420 CGATCGCCGGAACCCTAATGCCACCGGTTAGGTTCTCCGACGATGCTCCGATGATGCTGCCCTGG
842 CGATCGTCGG-ACCCCAATG-CGCCGATTAGGTTCT-C--CG--G---C-ATG--G-TGCCCCGA
* * * * * * * * * *
22022485 TGAAGAAAAATGCCGCACCAACACATGCTTGAGCCCAGCATGTGCTGCCGTAACCCT-GGATCCG
1 CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGG-TCCG
* * * *
22022549 GTCCGATCTTAGACTGGGAATGATCTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * *
22022614 TCAACCCATGAAACGAGGGTGCGGGTGCTCAGCCGGGCAGAGGGGCGGGATGCGCAAGCCAGGGA
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
** * * * * ** * * * * * *
22022679 TTGACTGGGTCCCCCTCTGCGTGCTGTCGATCCTACTATCGCCACCCTCGGT-TCGGTCCGATCT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCT-AGTCTGATCT
* *
22022743 TAGACTGGGAATGAACTCCGTATGCCTAAGCCGACCGACGAAACGA--GCGGAC--G-GG-CGGG
259 TAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGG
* * * * *
22022802 CGGGCACTACGCTGACCAGAGAGATGGGATGCGCAGGCCATGGATCGATAGGGTGGTAGGTGGGT
324 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
22022867 TTAGGCACATCTTCATATTTCTATGTGCCAATCCCACTTTTATGGCTTGTAAATTCATACAATGG
389 TTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
22022932 TCCCTTAAGCCTTCGCATGAAGTTTCATGGTAAGACGACTCGTTTTCTATCTTTCACGATTTTCA
454 TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCG
* * ***
22022997 AAACTTTTTACGGTTCGAGATTTTTTAAAA-TTTTTTC-GAAAGGAGTTTTGGCAGTAAACTTGG
519 AAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAG-AAGGAGTTTTGGCCCCAAACTTGG
* * * *
22023060 TAGACGTGATCCTCGTATTTTTGTTGGCAAGGA-AAAAAAATTCAGCTAAAAACTCGAAGTGTAC
583 CAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
22023124 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACCCTTTAATGGCTACTGGCAGCAA
648 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * ** * *
22023189 ACCTATAAAATCTAAAATGCTCCTTAAATGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
713 ACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGG
* * * *
22023254 GCCAATATAAGGGCCAAGTACTAGCACCCATCACATATCATGTGCGCACACCCCCCGGCCCCCCC
778 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCC
** * * * *
22023319 GATCGTCGGATCCGTAATGCCGTCGGTCAGGTTCTCCGATG-ATGGTGCCCCGC
843 GATCGTCGGA-CCCCAATG-CGCCGATTAGGTTCTCCG--GCATGGTGCCCCGA
* * * * * * * *
22023372 CGAAGAAAAATGCGACACCAGCACATGC-CTGAGCCCAGTATGTGCTATCGTAACCCTCAGTCTG
1 CGAAGGAAAATGCGGCACTAGCACATGCTC-GAGCCCAGTATGTGCTGTCGAAACACTCGGTCCG
*
22023436 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
65 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * * * * * * * *
22023501 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCAAAAGGGGTGGGATGCACAAGTCGGGGT
130 TCAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGA
** ** * * * * * * *
22023566 TTGATTGGGTCCCTCTCTGCGTGCTGCCGATCCTGCAGTCGCAACCCTCGATCCAGTCTGATCTT
195 TCAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTT
* * * *
22023631 AGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACAAAATGAGCG-GG-C--G-GG-CGGGC
260 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGGC
* * * **
22023690 AGGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGCCGTAAATCGATAGGGTGGT
325 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
22023746 CCTTGTATTT
Statistics
Matches: 13339, Mismatches: 2334, Indels: 2075
0.75 0.13 0.12
Matches are distributed among these distances:
866 14 0.00
867 17 0.00
868 95 0.01
869 145 0.01
870 49 0.00
871 15 0.00
872 308 0.02
873 1236 0.09
874 336 0.03
875 163 0.01
876 18 0.00
877 452 0.03
878 870 0.07
879 116 0.01
880 56 0.00
881 46 0.00
882 98 0.01
883 24 0.00
884 5 0.00
885 10 0.00
886 38 0.00
887 484 0.04
888 432 0.03
889 239 0.02
890 105 0.01
891 333 0.02
892 661 0.05
893 1016 0.08
894 530 0.04
895 44 0.00
896 492 0.04
897 239 0.02
898 246 0.02
899 464 0.03
900 152 0.01
901 757 0.06
902 614 0.05
903 400 0.03
904 145 0.01
905 154 0.01
906 21 0.00
907 20 0.00
908 8 0.00
909 15 0.00
910 274 0.02
911 15 0.00
912 5 0.00
913 7 0.00
914 4 0.00
915 13 0.00
916 10 0.00
917 7 0.00
918 9 0.00
919 8 0.00
920 13 0.00
921 7 0.00
922 11 0.00
923 13 0.00
924 32 0.00
925 22 0.00
926 8 0.00
927 16 0.00
929 2 0.00
930 6 0.00
931 13 0.00
932 2 0.00
933 7 0.00
934 1 0.00
935 15 0.00
936 12 0.00
937 16 0.00
938 12 0.00
939 14 0.00
940 10 0.00
941 2 0.00
942 2 0.00
943 1 0.00
944 3 0.00
946 1 0.00
947 5 0.00
948 3 0.00
950 3 0.00
951 1 0.00
952 3 0.00
953 9 0.00
954 15 0.00
955 9 0.00
956 10 0.00
957 14 0.00
958 8 0.00
959 2 0.00
960 4 0.00
961 2 0.00
962 5 0.00
963 13 0.00
964 5 0.00
965 15 0.00
966 6 0.00
967 12 0.00
968 9 0.00
969 6 0.00
970 4 0.00
971 5 0.00
972 4 0.00
973 5 0.00
974 4 0.00
975 2 0.00
976 5 0.00
977 8 0.00
978 10 0.00
981 2 0.00
982 1 0.00
983 3 0.00
984 1 0.00
986 1 0.00
990 4 0.00
992 1 0.00
993 3 0.00
995 4 0.00
996 14 0.00
997 1 0.00
998 1 0.00
1000 11 0.00
1001 7 0.00
1002 16 0.00
1003 17 0.00
1004 22 0.00
1005 6 0.00
1006 4 0.00
1007 7 0.00
1008 9 0.00
1009 11 0.00
1010 15 0.00
1011 5 0.00
1012 9 0.00
1013 12 0.00
1014 13 0.00
1015 6 0.00
1016 6 0.00
1017 14 0.00
1018 8 0.00
1019 14 0.00
1020 5 0.00
1021 6 0.00
1022 4 0.00
1023 6 0.00
1024 615 0.05
1025 814 0.06
1026 919 0.07
1027 1009 0.08
1028 895 0.07
1029 1060 0.08
1030 822 0.06
1031 803 0.06
1032 746 0.06
1033 724 0.05
1034 667 0.05
1035 708 0.05
1036 790 0.06
1037 683 0.05
1038 551 0.04
1039 608 0.05
1040 601 0.05
1041 514 0.04
1042 594 0.04
1043 1079 0.08
1044 490 0.04
1045 539 0.04
1046 560 0.04
1047 654 0.05
1048 734 0.06
1049 358 0.03
1050 620 0.05
1051 436 0.03
1052 501 0.04
1053 288 0.02
1054 390 0.03
1055 639 0.05
1056 481 0.04
1057 337 0.03
1058 352 0.03
1059 452 0.03
1060 521 0.04
1061 374 0.03
1062 314 0.02
1063 597 0.04
1064 468 0.04
1065 366 0.03
1066 374 0.03
1067 367 0.03
1068 396 0.03
1069 368 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (892 bp):
CGAAGGAAAATGCGGCACTAGCACATGCTCGAGCCCAGTATGTGCTGTCGAAACACTCGGTCCGG
TCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
CAACCCACGAAACAAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCGGGGAT
CAACCGAGTCCCCCTCTACATGCTACCGATCCTGCTGTCGCAACCCTCGATCTAGTCTGATCTTA
GACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGCGGACGGGCGGACGGGCG
GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAA
ACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGCAG
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGACAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGAT
CGTCGGACCCCAATGCGCCGATTAGGTTCTCCGGCATGGTGCCCCGA
Found at i:22013876 original size:26 final size:26
Alignment explanation
Indices: 22013840--22013918 Score: 122
Period size: 26 Copynumber: 3.0 Consensus size: 26
22013830 CCGGTCCGAT
* *
22013840 CTTAGACTGGGAATGATCTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
22013866 CTTACACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
22013892 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22013918 C
1 C
22013919 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.27, C:0.20, G:0.24, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22017261 original size:26 final size:26
Alignment explanation
Indices: 22017225--22017277 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
22017215 CTGGTCCAAT
22017225 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22017251 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22017277 C
1 C
22017278 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22020286 original size:901 final size:898
Alignment explanation
Indices: 22014141--22023745 Score: 11923
Period size: 873 Copynumber: 10.8 Consensus size: 898
22014131 ATTTTTCCAT
* * **
22014141 GATTTTTGAAACTTTTTTCGGAAGG-GTTTTTGGCCCCAAACTTTTTAGACGTGATCCTTGTATT
1 GATTTTTTAAAATTTTTTCGGAAGGAG-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* * ** *
22014205 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTG
65 TTTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * **
22014270 AAAAAAGTGTCACCATTTCAGACACTTTAATGGCTATTGTTAGCAAACCTGTAAAATCTCAAATG
130 AAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
22014335 CTCTTTAAAGGGGTGTGAGTTCTCGAGGATTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
195 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * **
22014400 ACAAACA-CCATCGCACATCATGTGCGCACA-CC-CCCAACCCCCCGATCGTCGGAACCCCAATG
260 ACCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCCCCGATCGTCGGAACCCCAATG
* ** * * * * **
22014462 TCGTCGGTCAGGTTCTTCGTCGATGCTCTGGCGATGGTGCCCCGGTGAAGAAAAATGCGGCACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * *
22014527 GCACATGCCCAATCCCAGCATGTGCTGCTGCAACCCTCAGTCCGATCCCATCTTAGACTGGGAAT
390 GCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
* * *
22014592 TAACTCCGT-TCGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCATGAAACGAGCGT
454 GAACTCCGTAT-GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * * * * *
22014656 GCGGGCACTCATCCAGCCAGAGGGGCGGGATGCACAA-ACTGAGG-TCGATCGGGTCCCTCTCAG
518 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGAT-GGTCGGGTCCCCCTCTG
* * * * * * *
22014719 CGTGCTGCCAATCCTGCTACCTCAACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCG
581 CGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * *
22014784 TATGCCTAAGCGAACCGACGAAAC-A--AGCGGGCAGGC--GGGCACTTTACG--GGCCAGAGAG
646 TATGCCTAAGCCAACCGACGAAACGATGGGCGGGCGGGCGGGGGCAC--TACGCCGGCCAGAGAG
* * * * * *
22014842 ATGGGAAGCGCAAGCCGTGGATCGATACGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTTTA
709 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
** *
22014907 TGTGCCAATGCCACTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
774 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * ** * ** *
22014972 TTCATGGCAAGACAACTCGTTTTTTATTTTTCATGATTTTTGAATCTTTTTGCGGTTTGG
839 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
* *
22015032 GATTTTTTAAAATTTTTTCGAAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
22015097 TTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * * * * *
22015162 AAAAACTGTCCCCATTTCAAACACTTTAATAGCTCCTGGCAGCAAACCTGTAAAATCTCTAATGT
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
22015227 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
22015292 CCAGCACCAATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCTGATCGTCAGAACCTCAATG
261 CCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCCCC-GATCGTCGGAACCCCAATG
* * * * * **
22015356 CCGCCGGTCAGGTTCTCCAATGATGTTCCGACGATGGTGCCCCGGCGAAGAAAAATGTAGCACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
22015421 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAA--C-C-GT-CGG-----TC-----C---G---
390 GCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
* * * *
22015465 G---TCCG-AT-CTTAGACTGGGAATGAACTCAGTATGCCTAAGTCAACCCACAAAATGAGCGTA
454 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * ** *
22015525 TGGGCGTTCAACCGGCCAGAGGGGCGGGATGCGTAAACCCGGGATCGACCGGGTCCCCCTCTACG
519 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT-GGTCGGGTCCCCCTCTGCG
* * * * ** * * * **
22015590 TGTTGTCGATCCTGCTGCCGCAACCCTTGGTCCGATCCCATCTTAGATTGGAAATAAACTTTGTA
583 TGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
22015655 TGCCTATGCCAACCAACAAAACGAGTGCGCGGGCGGGCGGCCGGGCACTACGCCGACTAGAGAGA
648 TGCCTAAGCCAACCGACGAAACGA-TGGGCGGGCGGGCGG--GGGCACTACGCCGGCCAGAGAGA
* * *
22015720 CGAGATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAC
710 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * *
22015785 GTGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTT
775 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
22015850 TCATGGCAAGACGACTCGTTTTTCTATTTTTGACGATTTTCAAAACTTTTTGCAGTTCAG
840 TCATGGCAAGACGACTCG-TTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
*
22015910 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
22015975 TTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
22016040 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
22016105 TCTTTAA-GGGGTGCGAGTTCTCGAGGTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
22016169 CCAGCACCCATTGTACATCATGTGCGCACACTCC-CCTGGCCCCCCAGATCGTCGGAACCCCAAT
261 CCAGCACCCATCGCACATCATGTGCGCACAC-CCACCCGGCCCCCC-GATCGTCGGAACCCCAAT
* * * * *
22016233 GCCACCAGTTAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGTACC
324 GCCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* *
22016298 AGCACATGCCCGAGCCCAGCATGTGCTACTGCAA-CC-C--T-CGG-------TT---C---G-A
389 AGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAA
* * *
22016344 T--A---C-TAT-CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCAT
453 TGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* ** *
22016402 GCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGACCAGGTCCCCCAT-TG
518 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT-GGTCGGGTCCCCC-TCTG
** * * * ** *
22016466 CGTGCTACCGATCCTACTACCACAACCCTCAGTCCCATCTGATCTTAGACTGGGAATGAACTCTG
581 CGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * *
22016531 TATGGCTAAGCCAACCGACGAAATGAACGGGCGGGC-GG-GTGGGCACTACGCCGGCCAGAGAGA
646 TATGCCTAAGCCAACCGACGAAACG-ATGGGCGGGCGGGCGGGGGCACTACGCCGGCCAGAGAGA
* *
22016594 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCTTTATATTTCTGC
710 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
22016659 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTT
775 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
*
22016724 TCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCAAAA-TTTTT-TACGGTTCGG
840 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTA--GTTCGG
* ** *
22016783 GATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTCATAGACTTGATCAC-TGTATT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC-CTTGTA-T
* ** *
22016847 TTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
64 TTTTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* * *
22016912 GAAAAAAGTATCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACCTGTAAAATATCAAAT
129 GAAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
22016977 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
194 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
** * * * ** *
22017042 TAATAGCACCCATCGCACATCATGTGCGTACACCCCCCCCGGCCCCCCAATCACCTGAACCCCAA
259 TACCAGCACCCATCGCACATCATGTGCGCACA-CCCACCCGGCCCCCCGATCGTCGGAACCCCAA
* * ** * * *
22017107 TGCCGCCGGGCAGGTTCTCCGACGATGCTCCGGTGATGGTGCCTCGATGAAGAAAAATGCGGCCC
323 TGCCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * * *
22017172 CAGCACATGCCCGAGCCCAGCATGGGATGCTGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGA
388 CAGCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGA
*
22017237 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCG
452 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
22017302 TACGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGTAAGTCGGGGATCGATCGGGTCCCTCTCTG
517 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT-GGTCGGGTCCCCCTCTG
* * * * * * * *
22017367 TGTGCTGCCAATACTCCTGCCGCAACCCTCAGTCTGAT-TCGATCTTAGACTGGGAATGAACTCC
581 CGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCC
* * * *
22017431 ATATGCCTAAGCCAACCGATGAAACAAGTGGGC---C-GGC--AGGCACTACGCCGGCCAGAGAG
645 GTATGCCTAAGCCAACCGACGAAACGA-TGGGCGGGCGGGCGGGGGCACTACGCCGGCCAGAGAG
* *
22017490 ACGGGATGCGTAAGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
709 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
**
22017555 TGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
774 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * ** * *
22017620 TTCATGGCAAGACGACTCGTTTTCTATTGTTCATGATTTTTGAAACTTTTTATGGTTCGG
839 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
* *
22017680 GATTTTTTAAAATTTTTTTGGAAGGAG---T-----CTAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
** * * * *
22017737 TTGCTGGCATGCATAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGAGTTTGTGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * * *
22017802 CAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGACAGCAAACTTGTAATATCTCAAATG
131 -AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
22017867 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAACT
195 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
22017932 ACCAGCACCCATCGTACATCATGTGCGCACACCCCCCCGACCCCCTGATCATCGGAACCCCAATG
260 ACCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCCCCGATCGTCGGAACCCCAATG
* * * *
22017997 CCGCCGGTCAGATTCTCCGACGATGCTCCGACGATGGTGCCCTGACGAAGAAAAATGTGGCACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * * * * *
22018062 ACACATGCCCGAGTCCAGCATGTGCTGTCGTAATCCTCAATCCGGTCCGATCTTAGATTGGGAAT
390 GCACATG-CCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
* * *
22018127 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGCATCCCTAAGTCAACCCACGAAACGAACGTG
454 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
22018192 CGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGTAAGTCAAGGATCGATCGGGTCCCCCTCTGTG
519 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT-GGTCGGGTCCCCCTCTGCG
* * * * *
22018257 TGCTATCGATACTACTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATA
583 TGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
22018322 TGCCTAAGCCAACCGATGAAAC-A--AGCGGGCGGGC--AGGCACTACGCTGGCCAGAGAGACGG
648 TGCCTAAGCCAACCGACGAAACGATGGGCGGGCGGGCGGGGGCACTACGCCGGCCAGAGAGACGG
* * **
22018382 GATGCGTAAGCCATGG-TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTG
713 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
*
22018446 CCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
778 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * * * *
22018511 TGGCAAGACGACCCGTTTTCTATTTTTCATGATTTTCGAAACTTTTACG--GTTCAG
843 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTT-TGTAGTTCGG
* *
22018566 GATTTTTTAAAATCTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * ** *
22018631 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGAGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
22018696 AAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
22018761 TCTTTAAGGGGGTGTGATTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAATA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * *
22018826 CCAGCACCCATCGCATATCATGTGTGCAGACCC-CGCGGCCCCCACGATCGTCGGAACCCCAATG
261 CCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCCC-CGATCGTCGGAACCCCAATG
** * * * ** * **
22018890 CCGTCGGTCAGGTTTTTCGGCGATGCTCCGGTGGTGGTGCCCCGGTGAAGAAAAATGCGGCACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* * * * *
22018955 GCACATGCTCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCTGGTCCGATCTTAGACTGGGAAT
390 GCACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
* * * *
22019020 GAACTCCATTTGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTG
454 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * ** * * *
22019085 C-GGCACTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCTGGGGAATGGTTGGGTCCCTCTCTACG
519 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGG-ATGGTCGGGTCCCCCTCTGCG
* ** * ** * *
22019149 TGCTGTCGATCCTGCTATCGTAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAAATCCATA
583 TGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
22019214 TGCCTAAGCCAACCGATGAAACGA-GCTGGCAGGCGGGCGGACGGGCGCTACGTCGGCCAAAGAG
648 TGCCTAAGCCAACCGACGAAACGATG--GGCGGGCGGGCGG--GGGCACTACGCCGGCCAGAGAG
*
22019278 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTAGGCACATCTTGATATTTCT
709 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCT
*
22019343 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCACGTGAAG
773 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * *
22019408 TTTCATGGCAAGATGACTCGTCTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTAGG
838 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
*
22019469 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
22019534 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
22019599 AAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACGGGCAGAAAACCTGTAAAATCTCAAATGC
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
22019664 TCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGAGGGATAGGGGGACAATATAAGGG-CAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
22019728 CCAGCACCCATCGCACATCATGTGCGCACACCCACCCGG-CCCCCGATCGTCGGAACCCCAATGC
261 CCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCCCCGATCGTCGGAACCCCAATGC
* * **
22019792 CACCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGTCCCGATAAAGAAAAATGCGGCACCAG
326 CACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* * * *
22019857 CACCTGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGTTCCAATCTCAGACTGGGAATG
391 CACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATG
* * ** * *
22019922 AACTTCTTATGCTTAGACAAGGAATGAACTCCCTAAGCCTAAGTCAACCCACGAAACGAGCGTGC
455 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * *
22019987 GGGCGCTCAGTCGGCCTGAGGGGTGGGATGCACAAGCCAGGGATCGGTCGGGTCCCCCTCTGCAT
520 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT-GGTCGGGTCCCCCTCTGCGT
* * * * * * * *
22020052 GCTGCCAATCTTGCTGCCGTAACACTCGGTCTGGT-TCGATCTTAGACTGGGAATGAACTCTGTA
584 GCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTA
* * * *
22020116 TGCCTAAGCCAACTGACGAAACGAGTGGGCGGACGGGCGGGTGAGCACTACGTCGGCCAGAAAGA
648 TGCCTAAGCCAACCGACGAAACGA-TGGGCGGGCGGGCGGG-G-GCACTACGCCGGCCAGAGAGA
* * * *
22020181 CGGGACGCACAAGCCGTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTGATATTTCTGC
710 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
22020246 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGTTCCCTTAAGCCTTCACGTGAAGTT
775 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
22020311 TCATGGCAAGATGACTCGTCTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTAGG
840 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
*
22020370 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCAAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
22020435 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
22020500 AAAAAGTAACCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAGCCTGTAAAATCTCAAATGC
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
22020565 TCTTTAAGGGGGTGTGAGTTCTCTAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
22020630 CAAGCACCCATCGCACATCATGTGCGCACACCCCACCGGGCCCCCCGATCGTCGGAACCCCAATG
261 CCAGCACCCATCGCACATCATGTGCGCACA-CCCACCCGGCCCCCCGATCGTCGGAACCCCAATG
* * * * *
22020695 CCACCGGTTAGGTTCTCCGGCGATGCTCCAACGATGCTACCCCGACGAAGAAAAATGCGGCACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
*
22020760 GCACATGCCTGAGCCCAGCATGTGCTACCGCAACCCTCA-----G-----TC-----C-----A-
390 GCACATGCC-GAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
*
22020804 G---TCC-AAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
454 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * * *
22020864 CGAGTGCTCAGCCGGGCAGAAGGGCGGGTTGCACAAGCCAGGGATTGACTGGGTCCCCCTCTGCA
519 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATGGTC-GGGTCCCCCTCTGCG
* * * *
22020929 TGCTATCAATCCTACTGCCGCCACCCTCGTTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
583 TGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
22020994 TGCCTAAGCTAATCGACG-AACGATCGGGCGGGCGGGC--GGGCACTACGTCGGCCAGAGAGACG
648 TGCCTAAGCCAACCGACGAAACGAT-GGGCGGGCGGGCGGGGGCACTACGCCGGCCAGAGAGACG
* *
22021056 AGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
712 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
*** *
22021121 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAACAATCCCTTAAGCCTTCACGTGAAGTTTA
777 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
** *
22021186 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACAGTTGGG
842 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
22021243 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
*
22021308 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
22021373 AAAAAGTAACCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAGCCTGTAAAATCTCAAATGC
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* *
22021438 TCTTTAAGGGGGTGTGAGTTCTCTAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* *
22021503 CAAGCACCCATCGCACATCATGTGCGCACACCCCACCGGGCCCCCCGATCGTCGGAACCCCAATG
261 CCAGCACCCATCGCACATCATGTGCGCACA-CCCACCCGGCCCCCCGATCGTCGGAACCCCAATG
* * * * *
22021568 CCACCGGTTAGGTTCTCCGGCGATGCTCCAACGATGCTACCCCGACGAAGAAAAATGCGGCACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
*
22021633 GCACATGCCTGAGCCCAGCATGTGCTACCGCAACCCTCA-----G-----TC-----C-----A-
390 GCACATGCC-GAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
*
22021677 G---TCC-AAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
454 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * *
22021737 CGAGTGCTCAGCCGGGCAGAGGGGCGGGATGCACAAGCCAGGGATTGACTGGGTCCCCCTCTGCA
519 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATGGTC-GGGTCCCCCTCTGCG
* * * * * * *
22021802 TGCTATCAATCCTACTACCGCCACCATCGTTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTA
583 TGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* *
22021867 TGCCTAAGCTAACCGACG-AACGATCGGGCGGGCGGGC--GGGCACTACGCCAGCCAGAGAGACG
648 TGCCTAAGCCAACCGACGAAACGAT-GGGCGGGCGGGCGGGGGCACTACGCCGGCCAGAGAGACG
* *
22021929 AGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
712 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
*
22021994 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTC
777 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* *
22022059 ATGGCAAGACGACTCGTTTTTTATCTTTCACGATTTTCAAAACTTTTTGCT-GTTCGG
842 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTG-TAGTTCGG
* * * *
22022116 GATTTTTTAAACTTTTTTCGGAAGGAGTTTTGGCCCCACACTTGGTAGACATGATCATTGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
22022181 TTTTTGGCAT-GGAAAAAAAATTCAGCTAAAAACTCGAAGTGTA-AGAGATTTTGTGACCATTTG
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACA-AGATTTTGTGACCATTTG
* * *
22022244 AAAAAAGTAACCCCATTTTAGACACTATAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
130 AAAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
22022309 CTTTTTAAGGGGGTGTGAGTTCTCCG-GGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAG
195 CTCTTTAAGGGGGTGTGAGTTCT-CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * *
22022373 TACCAGCACCCATCGCACATCATGTGCGTACACCCCCCCGGCCCCTCCGATCGCCGGAACCCTAA
259 TACCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCC-CCGATCGTCGGAACCCCAA
* * * * ** *
22022438 TGCCACCGGTTAGGTTCTCCGACGATGCTCCGATGATGCTGCCCTGGTGAAGAAAAATGCCGCAC
323 TGCCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCAC
* * * * *
22022503 CAACACATGCTTGAGCCCAGCATGTGCTGCCGTAACCCT-GGATCCGGTCCGATCTTAGACTGGG
388 CAGCACATGC-CGAGCCCAGCATGTGCTGCCGCAACCCTCAG-TCCGGTCCAATCTTAGACTGGG
* * * *
22022567 AATGATCTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAACGAGG
451 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * *
22022632 GTGCGGGTGCTCAGCCGGGCAGAGGGGCGGGATGCGCAAGCCAGGGATTGACTGGGTCCCCCTCT
516 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATGGTC-GGGTCCCCCTCT
** * * *
22022697 GCGTGCTGTCGATCCTACTATCGCCACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCC
580 GCGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* * *
22022762 GTATGCCTAAGCCGACCGACGAAACGA-GCGGACGGGCGGGC--GGGCACTACGCTGACCAGAGA
645 GTATGCCTAAGCCAACCGACGAAACGATG-GG-CGGGCGGGCGGGGGCACTACGCCGGCCAGAGA
* * *
22022824 GATGGGATGCGCAGGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
708 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
*** * * * *
22022889 ATGTGCCAATCCCACTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCGCATGAAG
773 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * *** *
22022954 TTTCATGGTAAGACGACTCGTTTTCTATCTTTCACGATTTTCAAAACTTTTTACGGTTCGA
838 TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
* *** *
22023015 GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCAGTAAACTTGGTAGACGTGATCCTCGTATTT
1 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* ** *
22023080 TTGTTGGCA-AGGAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
66 TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
22023144 AAAAAGTGTCCCCATTTCAGACCCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTAAAATGC
131 AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* **
22023209 TCCTTAAATGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
196 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * **
22023274 CTAGCACCCATCACATATCATGTGCGCACACCC-CCCGGCCCCCCCGATCGTCGGATCCGTAATG
261 CCAGCACCCATCGCACATCATGTGCGCACACCCACCCGG-CCCCCCGATCGTCGGAACCCCAATG
** * *
22023338 CCGTCGGTCAGGTTCT-C--CGA---T-----GATGGTGCCCCGCCGAAGAAAAATGCGACACCA
325 CCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCA
* ** * * **
22023392 GCACATGCCTGAGCCCAGTATGTGCTATCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAAT
390 GCACATGCC-GAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAAT
22023457 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
454 GAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * * * * *
22023522 CGGGCGCTCAGTCGGCAAAAGGGGTGGGATGCACAAGTCGGGGTTTGATTGGGTCCCTCTCTGCG
519 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGG-ATGGTCGGGTCCCCCTCTGCG
* * * * * *
22023587 TGCTGCCGATCCTGCAGTCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTCCGTA
583 TGCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
22023652 TGCCTAAACCAACCGAC-AAA--ATGAGCGGGCGGGCGGGCAGGCACTACGCCAGCCAGAGAGAT
648 TGCCTAAGCCAACCGACGAAACGATGGGCGGGCGGGCGGG--GGCACTACGCCGGCCAGAGAGAC
**
22023714 GGGATGCGCAAGCCGTAAATCGATAGGGTGGT
711 GGGATGCGCAAGCCGTGGATCGATAGGGTGGT
22023746 CCTTGTATTT
Statistics
Matches: 7781, Mismatches: 772, Indels: 326
0.88 0.09 0.04
Matches are distributed among these distances:
868 78 0.01
869 86 0.01
870 6 0.00
871 13 0.00
872 310 0.04
873 1214 0.16
874 294 0.04
875 184 0.02
876 16 0.00
877 256 0.03
878 693 0.09
879 9 0.00
880 4 0.00
882 2 0.00
883 10 0.00
884 7 0.00
885 2 0.00
886 32 0.00
887 469 0.06
888 447 0.06
889 173 0.02
890 3 0.00
891 244 0.03
892 161 0.02
893 351 0.05
894 193 0.02
895 3 0.00
896 13 0.00
897 219 0.03
898 233 0.03
899 470 0.06
900 43 0.01
901 784 0.10
902 391 0.05
903 253 0.03
904 115 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
TTTTTGGCATCCGTAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
AAAAAGTATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
CCAGCACCCATCGCACATCATGTGCGCACACCCACCCGGCCCCCCGATCGTCGGAACCCCAATGC
CACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
CACATGCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCAATCTTAGACTGGGAATGA
ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATGGTCGGGTCCCCCTCTGCGTGC
TGTCGATCCTACTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
CTAAGCCAACCGACGAAACGATGGGCGGGCGGGCGGGGGCACTACGCCGGCCAGAGAGACGGGAT
GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTAGTTCGG
Found at i:22022585 original size:26 final size:26
Alignment explanation
Indices: 22022556--22022608 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
22022546 CCGGTCCGAT
* *
22022556 CTTAGACTGGGAATGATCTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
22022582 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
22022608 C
1 C
22022609 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:22023479 original size:26 final size:26
Alignment explanation
Indices: 22023443--22023495 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
22023433 CTGGTCTGAT
22023443 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22023469 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
22023495 C
1 C
22023496 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:22024159 original size:26 final size:26
Alignment explanation
Indices: 22024130--22024179 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
22024120 CTGGTCCGAT
22024130 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
22024156 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
22024180 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:22025059 original size:26 final size:26
Alignment explanation
Indices: 22025030--22025079 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
22025020 CTGGTCCGAT
22025030 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGGAATGAACTCCGTACG
22025056 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
22025080 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTACG
Found at i:22027155 original size:117 final size:118
Alignment explanation
Indices: 22027018--22027248 Score: 367
Period size: 118 Copynumber: 2.0 Consensus size: 118
22027008 TCTTGTGCAG
* * *
22027018 GGAAAATTGATACTTTCAACTTTTCCCCAAAAAT-ATTTTTTGGAAATTTATTTTTAAGGAAAAT
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATCACTTTTTGAAAATTTATTTCTAAGGAAAAT
* *
22027082 TGATACTTTCAACTTTT-CCTCAAAAATATTTTTTTTGAAACTTTGATTTCCAA
66 TGATACTTTCAAATTTTCCCT-AAAAATATTTTTTTGGAAACTTTGATTTCCAA
* *
22027135 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATCCCTTTTTGAAAATTTATTTCTAAGGAAAAT
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATCACTTTTTGAAAATTTATTTCTAAGGAAAAT
*
22027200 TGATACTTTCAAATTTTCCCTAAAAATATTTTTTTGGAAATTTTGATTT
66 TGATACTTTCAAATTTTCCCTAAAAATATTTTTTTGGAAACTTTGATTT
22027249 TTATTTAAAG
Statistics
Matches: 104, Mismatches: 8, Indels: 3
0.90 0.07 0.03
Matches are distributed among these distances:
117 33 0.32
118 68 0.65
119 3 0.03
ACGTcount: A:0.34, C:0.13, G:0.09, T:0.44
Consensus pattern (118 bp):
GGAAAATTGATACTTTCAACTTTTCCCCAAAAATCACTTTTTGAAAATTTATTTCTAAGGAAAAT
TGATACTTTCAAATTTTCCCTAAAAATATTTTTTTGGAAACTTTGATTTCCAA
Found at i:22027217 original size:58 final size:57
Alignment explanation
Indices: 22027018--22027242 Score: 308
Period size: 58 Copynumber: 3.9 Consensus size: 57
22027008 TCTTGTGCAG
* * *
22027018 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTGGAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATATTTTTTGAAAATTTATTTCTAA
* *
22027075 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATATTTTTTTTGAAACTTTGATTTCCAA
1 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATA--TTTTTTGAAAATTT-ATTTCTAA
**
22027135 GGAAAATTGATACTTTCAACTTTTCCTCAAAAATCCCTTTTTGAAAATTTATTTCTAA
1 GGAAAATTGATACTTTCAACTTTTCCTCAAAAAT-ATTTTTTGAAAATTTATTTCTAA
* *
22027193 GGAAAATTGATACTTTCAAATTTTCC-CTAAAAATATTTTTTTGGAAATTT
1 GGAAAATTGATACTTTCAACTTTTCCTC-AAAAATA-TTTTTTGAAAATTT
22027243 TGATTTTTAT
Statistics
Matches: 149, Mismatches: 13, Indels: 11
0.86 0.08 0.06
Matches are distributed among these distances:
57 35 0.23
58 50 0.34
59 24 0.16
60 40 0.27
ACGTcount: A:0.35, C:0.14, G:0.08, T:0.43
Consensus pattern (57 bp):
GGAAAATTGATACTTTCAACTTTTCCTCAAAAATATTTTTTGAAAATTTATTTCTAA
Done.