Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35885061
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Warning! 165000 characters in sequence are not A, C, G, or T
File 72 of 195
Found at i:14318241 original size:877 final size:870
Alignment explanation
Indices: 14315927--14319233 Score: 3510
Period size: 901 Copynumber: 3.7 Consensus size: 870
14315917 GCCCAGCATG
* * * * * *
14315927 TGCTGCCAAAACCCTCAGTCCGGTCCGATCTTAGACTGGTAATGAACCCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAAAGAACTCCATATGCCTAAGCCAA
* * *
14315992 CCGACGAAACGAGCGGGCGGG-CGAGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGG
66 CCGACGAAACGAGCAGGCGGGCCG-GCACTACGCCGACCAGAGAGACGAGATGCGCAAGCCATGG
* * *
14316056 ATCGATAGGGTGGTAGGTGGGTTTAGGCACGTCTTCATATTTTTATGTGCCAATGCTATTTTTAT
130 ATCGATAGGGTGGTAGGTGGGTTTAGGCAC-T-ATCATA----CAT-TGCCAATGCCATTTTTAT
* * *
14316121 GGCTTGTAAATTCATAAAATAGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGG
188 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC-G
* *
14316186 TTTT-TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTGTCGTAAC
252 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA-
* *
14316250 GG-TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAGAAA-
316 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AAAT
* *
14316313 TCAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAGAAGTGTCCCCATTTCAGAC
380 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
14316378 AATTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
445 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
14316443 TGAGGTTTGATGAGGGATA-GGGGCCTAATATAAGGGCCAAGC-ACCAGCACCCATCACACATCA
510 CGAGGTTTGATGAGGGATAGGGGGCC-AATATAAAGGCCAA-CTACCAGCACCCATCACACATCA
* * * *
14316506 TGTGCGGACACCCCCCGGTCCCCCCGATCGTCGGAACCCTAATGCCG-TCAG-T-T-AGGTTCTC
573 TATGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGATCAGCTGTCAGGTTCTC
* * * *
14316567 CGTCGATGCTCCGGCGATGGTGCCCCAGTGAAGAGAAATACAGCACCAGCACATGCCCGAGCCCA
638 CGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATA-AGCACCAGCACATGCCCGAGCCC-
* ** *
14316632 AGATGTACTGTTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAG
701 --A-GTA-TG-TGCTACCC-C--AAC---CC--TC-TAGTCT--G-A-G-A-TCTGTATGCTTAG
* *
14316697 ATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACA-AGCATGCGGACGCTCAGCCGGC
746 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA-AGAGCATGCGGGCGCTCAGCCGGC
* * * ** *
14316761 CAGAGGGGCGGGTTGCGCAAGTCGGGGATCGGTCAGGTCCCCCTCTATGTGCTGTCGATCC
810 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
14316822 TGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
1 TGCTGCCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAAAGAACTCCATATGCCTAAGCCAA
** * * * *
14316887 TGGACGAAACAAAGCGGACGCGGGCCGGGCGGGCAAGCGGAGCAAGCATGCGACCAGAGAGTC-A
66 CCGACG----AAA-C-GA-GCAGG-CGGGCCGGC-A-C-TA-C--GC---CGACCAGAGAGACGA
* * **
14316951 AATGCGCAAAG-CGTGGATCGATAAAGTGGTAGGT-GG-TTAGGACATCT-TC-TACTATTTCTG
114 GATGCGC-AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGG-CA-CTATCATAC-A----T-
*
14317011 CATGCCAATGCCATTTTTATGGCTT-TTAATTCATA-AATGGT--CTTAAGCCTTCACGTG-AGT
170 --TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * *
14317071 TTCATGGCGAGACAACTCGTTTGTCTATTGGTTCATGA-TTTTG-AACTTTTTAC-GTTC-GGAT
233 TTCATGGCAAGACGACTCGTTT-TCTATT-TTTCACGATTTTTGAAACTTTTTACGGTTCGGGA-
*
14317132 TTTTTTAAAATTTTTT-AGAAGGAGTTTTGG-CCCAAA-TTGGTAGACGTG-TCCTTGTATTTTT
295 TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * *
14317193 GTTGGCATGCA-AAACCAAATTCAGCTAAAAACTCGAAGTGTAC-AGATTTTGCGGACCGTTTGA
360 GTTGGCATGCACAAA-AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG-TGACCATTTGA
* * * *
14317256 AAAAAGTGTCCCCATTTCAGACACATTAGTGGCTGCTTGGTAGCAAACCTGTAAAATCTCAAATG
423 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC-TGGCAGCAAACCTGTAAAATCTCAAATG
14317321 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAACT
487 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAACT
*
14317386 GCCAGCACCCATCACACATCATATGCGCACAAACCCCCCGGCCCCCCCGATCGTCGGAACCCCAA
552 ACCAGCACCCATCACACATCATATGCGCAC--ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAA
* * *
14317451 TGCCGTTGGTACCTCAATGCATCCGGTCAGGTTCTCCGACGATGCTTCGACGAGGGCGCCCCGGT
615 TGCC----G-A--TC-A-GC-T---GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGT
** *
14317516 GAAGAAAAATGTGCCACCAGCACATGCCCGAGCCCAGTATGTGCTGCCCCAACCCTC-AGTCTG-
667 GAAGAAAAATAAG-CACCAGCACATGCCCGAGCCCAGTATGTGCTACCCCAACCCTCTAGTCTGA
14317579 G-TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAAGAGCATGCG
731 GATCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAAGAGCATGCG
** * * *
14317641 GGCGCTCAGCCATCCAAAAGGGCGGGATGCGCAAGCCCGGGATCGGTCGGGT-CCCCTCTGCGTG
796 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTG
14317705 CTGCCGATCC
861 CTGCCGATCC
* * * *
14317715 TGCTGCCTCAACCATCAATCCGGTCTGATCTTAGACTAGGAAAGAACTCCATATGCCTAAGCCAA
1 TGCTGCCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAAAGAACTCCATATGCCTAAGCCAA
* * * *
14317780 CCGACGAAACGAGCAGGCGGGCCGGCACTACGCCGGCCAGAGAGACGGGATGTGTAAGCCATGGA
66 CCGACGAAACGAGCAGGCGGGCCGGCACTACGCCGACCAGAGAGACGAGATGCGCAAGCCATGGA
14317845 TCGATAGGGTGGTAGGTGGGTTTAGGCA-TATC-TACA-TGCCAATGCCATTTTTATGGCTTGTA
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACTATCATACATTGCCAATGCCATTTTTATGGCTTGTA
* *
14317907 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTTGTTTTCTATT
196 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
** * * **
14317972 TTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTCAG
261 TTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * * *
14318037 CCCCAAACTTGGTAGACCTGATCCTTGTATTTTTGTTGGCATGAACAAAAAGATTCAGCTAAATA
326 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
*
14318102 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCGTTTCAGACACTTTAATGGC
391 CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
14318167 TACTGGCGGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGATGTGAGTTCTCGAGGTTTGAT
456 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
* * * ** * *
14318232 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACCCATTGCACATCATGTACGCACACCC
521 GAGGGATAGGGGGCCAATATAAAGGCCAACTACCAGCACCCATCACACATCATATGCGCACACCC
* * * *
14318297 CCCGG-CCCCCTGATCGTCGGAACACCAATGCC-A-C--CTGTCAGGTTCTCAGGCGATGCTCCG
586 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGATCAGCTGTCAGGTTCTCCGACGATGCTCCG
* * * * * *
14318357 ATGATGGTGCCCCGATGAAGAAAAATACGACACCAGCACATGCCCGAGCCTAGCATGTGCTACCG
651 ACGATGGTGCCCCGGTGAAGAAAAATAAG-CACCAGCACATGCCCGAGCCCAGTATGTGCTACCC
*
14318422 CAACCCTCGATCTGGTCCGATCTTAGATTGCGAATGAACTTCGTATGCTTAGACTGGGAATGAAC
715 CAA-CC-C--TC---T-AG-TC-T-GA----G-AT---C-T-GTATGCTTAGACTGGGAATGAAC
* * * * * * *
14318487 TCCGTGTCCCTAAGTTAACCCACGAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGGAT
759 TCCGTATGCCTAAGTCAACCCACGAAAAGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* *
14318552 GCGCAAGCCGGGGATC-GTCTGGGTCCCCCTTTGCGTGCTGCCGTTCC
824 GCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
14318599 TGCTGTCACAACCCTCAGTTCGGTCTGATCTTAGACTGGGAAAGAACTCCGTGTGCCTAAGCTAA
1 TGCTGCCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAAAGAACTCCATATGCCTAAGCCAA
* * * * * *
14318664 CCGACAAAACGAGCAGGCGGGCAGACGGACGGGCACTACGTCGGCTAGAGAGACCAGATGAGCAA
66 CCGACGAAACGAGCAGGC-GG--G-C---C-GGCACTACGCCGACCAGAGAGACGAGATGCGCAA
* * * ** *
14318729 GTCATGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTTTGTATGCAATGCCAT
123 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC-T-ATCATA-CATTG---CCAATGCCAT
** *
14318794 TTTTATGGCTTGTAAATTCATACAATGGTCTTTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACG
182 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
14318859 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA-TTTTTAAAATATTTTT
247 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT-TTTTT
* * *
14318923 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCGTTGTATTTTTTTTGGCATGCACAAAA
311 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
14318988 AAATTTAGCTAAAAACTCGAAGTGGACAAGATTTTGTGACC-TTTCGAAAAAAGTGTCCCCATTT
376 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTT
* * ** *
14319052 CAGACACTTTAATGGCTACTAGTAGCAAACCAATAAAATCTCAAATGCTCTTTAAGGGGTTGTGA
440 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * * *
14319117 GTTCTCGAGGTTTGATGAGAGATAGGAGGCCAATAT-AAGGGCATAGTGCCAGCACCCATCGCAC
505 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCA-ACTACCAGCACCCATCACAC
* * * *
14319181 ATCATATGCGGACACCCCCCTCGGCCCCCCAGATCGCCAGAACCCCAATGCCG
569 ATCATATGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCG
14319234 TCGGTATGGG
Statistics
Matches: 2047, Mismatches: 233, Indels: 254
0.81 0.09 0.10
Matches are distributed among these distances:
857 78 0.04
858 2 0.00
859 1 0.00
860 1 0.00
861 3 0.00
865 1 0.00
866 1 0.00
867 2 0.00
868 25 0.01
869 10 0.00
870 6 0.00
871 6 0.00
872 25 0.01
873 30 0.01
874 46 0.02
875 23 0.01
876 23 0.01
877 151 0.07
878 93 0.05
879 19 0.01
880 1 0.00
881 2 0.00
882 6 0.00
883 92 0.04
884 94 0.05
885 10 0.00
886 4 0.00
887 3 0.00
888 2 0.00
889 3 0.00
891 1 0.00
892 62 0.03
893 81 0.04
894 96 0.05
895 64 0.03
896 6 0.00
898 2 0.00
899 18 0.01
900 104 0.05
901 471 0.23
902 25 0.01
903 55 0.03
904 53 0.03
905 30 0.01
906 28 0.01
907 10 0.00
908 10 0.00
909 16 0.01
910 27 0.01
911 31 0.02
912 16 0.01
913 2 0.00
914 6 0.00
915 3 0.00
916 3 0.00
917 1 0.00
919 2 0.00
920 61 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (870 bp):
TGCTGCCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAAAGAACTCCATATGCCTAAGCCAA
CCGACGAAACGAGCAGGCGGGCCGGCACTACGCCGACCAGAGAGACGAGATGCGCAAGCCATGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACTATCATACATTGCCAATGCCATTTTTATGGCTTGTA
AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
TTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
CTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
GAGGGATAGGGGGCCAATATAAAGGCCAACTACCAGCACCCATCACACATCATATGCGCACACCC
CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGATCAGCTGTCAGGTTCTCCGACGATGCTCCG
ACGATGGTGCCCCGGTGAAGAAAAATAAGCACCAGCACATGCCCGAGCCCAGTATGTGCTACCCC
AACCCTCTAGTCTGAGATCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
CGAAAAGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG
GTCCCCCTCTGCGTGCTGCCGATCC
Found at i:14320095 original size:25 final size:25
Alignment explanation
Indices: 14320061--14320108 Score: 87
Period size: 25 Copynumber: 1.9 Consensus size: 25
14320051 CGGGCACATA
14320061 CTCCGATGATAGTGCCCCGGTGATG
1 CTCCGATGATAGTGCCCCGGTGATG
*
14320086 CTCCGATGATAGTGCCCTGGTGA
1 CTCCGATGATAGTGCCCCGGTGA
14320109 AGACCAATGT
Statistics
Matches: 22, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
25 22 1.00
ACGTcount: A:0.17, C:0.27, G:0.31, T:0.25
Consensus pattern (25 bp):
CTCCGATGATAGTGCCCCGGTGATG
Found at i:14323854 original size:718 final size:711
Alignment explanation
Indices: 14321881--14324073 Score: 3082
Period size: 718 Copynumber: 3.1 Consensus size: 711
14321871 TCCTGCTGCT
* * *
14321881 GCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGACCTCTGTATGCCTAAGCCAACCTACGA
1 GCAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGA
* * *
14321946 AACG-A---GC--GGGCGGGCGGGCACTATGCCGGCCAAAAAGACGGGATGCGTAAGCCGTGGAT
66 AACGAACGGGCGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGGAT
* * *
14322005 CGATAGGGTGGTAGGTAGGTTTTGGCACATCTTCATATTTCTTCATGCCAATGCCAGTTTTATGG
131 CGATAGGGTGGTAGGTGGGTTTT-GCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGG
* *
14322070 TTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACACTCGTTTT
195 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACACTCGTTTT
* * * *
14322135 CTATTTTTCACGATTTTTGAAACTTTTGTGGTT-TGGGATTTTTTAAAATTTTTTCGGAAGGATT
260 CTATTTTTCATGATTTTTGAAACTTTTTTCGTTCT-GGATTTTTTAAAATTTTTTCGGAAGGAGT
* ** *
14322199 TTTGGCCCCTAACTTGGTAGACGTGATCCTTGTATTTTTGTTCACATGCACAAAAAAATTCACCT
324 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TCAGCT
* * * *
14322264 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCACATTTAAGACACTTTA
388 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
14322329 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGT
453 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGT
* * *
14322394 TTGATGAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCGCACATCAAGTGCGCA
518 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACA
* * * * *
14322459 CACCCCCCGGCCCCCT--AATCACCAGAACCCCAAAGCCGCCGGTCAGGTTCTCTGGTGATGCTT
583 CACCCCCCAGCCCCCTCGAA-CGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTC
* * * *
14322522 CGACGATGGTG-CCCGACGAAGAGAAATGCCGCACCGGCACATGCTCGAGTCTAGCATGTGCTGT
647 CGACGATGGTGCCCCGACGAAGA-AAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGT
14322586 C
711 C
* * *
14322587 GTAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACT-TCGTATGCCTAAGCCAATCGACG
1 GCAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGACG
* * * *
14322651 AAACGAGCGGAAG-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAGCCTT
65 AAACGAACGG--GCGG-GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGT
** ** *
14322715 GGATCGATAGGGTGGTAGGTGGGTATGGGCACATCTTCATATTTCTATGTGCCAATTCCATTTTT
127 GGATCGATAGGGTGGTAGGTGGGT-TTTGCACATCTTCATATTTCTACATGCCAATGCCATTTTT
** *
14322780 ATCACTTGTAAAATCATACAATGGTCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACT
191 ATGGCTTGTAAATTCATACAATGGT-CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-ACT
* * ** *
14322845 CGTTTTCTATTTTTCATGATTTTTGAAACTATTTGCGGTTCCAGATTTTTTAAAATATTTTCGGA
254 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTTC-GTTCTGGATTTTTTAAAATTTTTTCGGA
* * * *
14322910 AGGAGTTCTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTGTTGGCATGCATCAAAAAAT
318 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAAA
* *
14322975 TCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGAC
382 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
14323040 ACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGTTCT
447 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCT
*
14323105 CAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
512 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
14323170 TGCACACACCCCCTTCAGCCCCCTCGAACGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
577 TGCACACACCCCC--CAGCCCCCTCGAACGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
* * * *
14323235 GATGCTCCGACGATGGTGCCCCGACGAAGAAAACTACGGCACCAACAGATGCTGGAGCCCAGCAT
640 GATGCTCCGACGATGGTGCCCCGACGAAGAAAA-TGCGGCACCAGCACATGCTCGAGCCCAGCAT
14323300 GTGCTGTC
704 GTGCTGTC
** * *
14323308 GCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCAAAGCCAACCGACGA
1 GCAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGA
* * * *
14323373 AACGAACGGGCGGATGGGTGGGCGGGCACTACGTCAGCCAGAGAGAC-GGATGCGTAAGTCGTGG
66 AACGAACGGGCGG--GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGG
*
14323437 ATCGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
129 ATCGATAGGGTGGTAGGTGGGTTT-TGCACATCTTCATATTTCTACATGCCAATGCCATTTTTAT
*
14323502 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGT
193 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-ACTCGT
* *
14323567 TTTCTATTTTTCATGATTTTTGAAACTTTTTATCATTCTGGATTTTTTAAAATTTTTTTGGAAGG
257 TTTCTATTTTTCATGATTTTTGAAACTTTTT-TCGTTCTGGATTTTTTAAAATTTTTTCGGAAGG
**
14323632 AGTTTTGGCCCCCGACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAG
321 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAG
*
14323697 CTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
386 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14323762 TAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGGGTTCTCGAG
451 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAG
* * *
14323827 GTTTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCTGCACCCATCGCACATCGTGTGTG
516 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC--ATGTG
* * * * * * *
14323892 CACACCACCCCCGA-CCCCCCCGATCGCCTGAACCCCAATGTCGTCGGTCAGGTTCTCCGATGAT
579 CACA-CACCCCCCAGCCCCCTCGAACGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGAT
* * * *
14323956 GCTGCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCTCATGCCCGAGCCCAACATGTG
643 GCTCCGACGATGGTGCCCCGACGAAG-AAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTG
*
14324021 TTGTC
707 CTGTC
** * *
14324026 GCAACCCTCAGTCTGGTCCGATCTTAGACTGAGAATGAACTCCGTATG
1 GCAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATG
14324074 TTTAGACTAG
Statistics
Matches: 1311, Mismatches: 145, Indels: 50
0.87 0.10 0.03
Matches are distributed among these distances:
705 1 0.00
706 61 0.05
712 1 0.00
714 117 0.09
715 36 0.03
716 34 0.03
717 267 0.20
718 338 0.26
719 159 0.12
720 152 0.12
721 144 0.11
722 1 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (711 bp):
GCAACCCTCAGTCCAGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGA
AACGAACGGGCGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAGCCGTGGAT
CGATAGGGTGGTAGGTGGGTTTTGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACACTCGTTTTC
TATTTTTCATGATTTTTGAAACTTTTTTCGTTCTGGATTTTTTAAAATTTTTTCGGAAGGAGTTT
TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATCAGCTAAA
AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACACAC
CCCCCAGCCCCCTCGAACGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGAC
GATGGTGCCCCGACGAAGAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTC
Found at i:14324091 original size:25 final size:26
Alignment explanation
Indices: 14324049--14324098 Score: 84
Period size: 25 Copynumber: 2.0 Consensus size: 26
14324039 TGGTCCGATC
14324049 TTAGACTGAGAATGAACTCCGTATGT
1 TTAGACTGAGAATGAACTCCGTATGT
*
14324075 TTAGACT-AGAATTAACTCCGTATG
1 TTAGACTGAGAATGAACTCCGTATG
14324099 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
25 16 0.70
26 7 0.30
ACGTcount: A:0.32, C:0.16, G:0.20, T:0.32
Consensus pattern (26 bp):
TTAGACTGAGAATGAACTCCGTATGT
Found at i:14324984 original size:26 final size:26
Alignment explanation
Indices: 14324955--14325007 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14324945 CCGGTCCAAT
*
14324955 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14324981 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14325007 C
1 C
14325008 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14325477 original size:900 final size:899
Alignment explanation
Indices: 14323301--14326231 Score: 3904
Period size: 911 Copynumber: 3.2 Consensus size: 899
14323291 GCCCAGCATG
* * *
14323301 TGCTGTCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACT-CTGTATGCCAAAGCCA
1 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTAC-GTATGCCTAAGCCA
* * ** ** * * *
14323365 ACCGACGAAACGAACGGGCGGATGGGTGGGCGGGCACTACGTCAGCCAGAGAGAC-GGATGCGTA
65 ACCGATGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
14323429 AGTCGTGGATCGATAGGGTGGTAGGTGGGTTTATGCACATCTTCATATTTCTGCATGCCAATGCC
130 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
**
14323494 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGA
195 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGA
* *
14323559 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATC-ATTCT-GGATTTTTTAAAATTT
260 CGACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTA-CGGTT-TGGGATTTTTTAAAATTT
* * * *
14323622 TTTTGGAAGGAGTTTTGGCCCCCGACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
323 TTTCGAAAGGAGTTTTGGCCCCAGAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
*
14323687 AAAAAATCAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
388 AAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14323752 TCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTG
453 TCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
14323817 GGTTCTCGAGGTTTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCTGCACCCATCGCAC
518 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* ** *
14323882 ATCGTGTGTGCACACCACCCCCGACCCCCCCGATCGCCTGAACCCCAATGTCGTCGGTCAGGTTC
583 ATCATG-CCGCACA-CACCCCCG--CCCCCCGATCGCCTGAACCCCAATGCCGTCGGTCAGGTTC
* * * *
14323947 TCCGATGATGCTGCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCTCATGCCCGAGCC
644 TCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * ** * ** * * *
14324012 CAACATGTGTTGTCGCAACCCTCAGTCTGGTCCGATCTTAGACTGAGAATGAACTCCGTATGTTT
709 CAGCATGTGCTACCGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * **
14324077 AGACT-AGAATTAACTCCGTATGCCTAAGTCAACCCATGAAATGAGTGTACGGGCGCTT-AGTCG
774 AGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACCAGTGTACGGGCG-TTCAGTCG
* * * * **
14324140 GCCAGAGGGGAGGGATGCGCAAGCCGGGGATTGGCCGGCTCCCCCTCTGCGTGCTACCTTTCC
838 GCCAGAGGGGAGGGATGCGCAAGCCGAGGATCGACCGG-TCCCCCTCTGCGTGCTGCCGATCC
* * * *
14324203 TACTGCTGCAACCCTCGATCCT-GTCTGATCCTAGACTGGGAATGAACTACGTATGCCTAAGCCA
1 TGCTGCCGCAACCCTCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCA
* * * *
14324267 ACCGATGAAACGAGCGGGCGAGCGGGCGGGCAGGCAGGCGGGCACTACGTCGACCAGAAAGATGG
65 ACCGATGAAACGAGC--G-G-GCGGGC--G--GGCAGGCGGGCACTACGCCGGCCAGAGAGACGG
* * * *
14324332 GATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTTTACGTG
122 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATG
* *
14324397 CCAATGCCATTTTTATGGCTGGTAAATTCATACAATGGTCACTTAAGCCTTCATGTGAAGTTTCA
187 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCA
* * * *
14324462 TGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTA
252 TGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTA
*
14324527 AAATTTTTTC-AGAAGGAGTTTTGGCCCCA-AACTTGGTAGATGTGATCCTTGTATTTTTGTTGG
317 AAATTTTTTCGA-AAGGAGTTTTGGCCCCAGAA-TTGGTAGACGTGATCCTTGTATTTTTGTTGG
* * *
14324590 CATGCACAAAAAAATTAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTG
380 CATGCACAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * *
14324655 TCCCTATTTCAGACACTTTAGTGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAG
445 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAG
* * * **
14324720 GGGGTGTGAGTTCTCGAGGTTTGATGATGGAGAGGGGGCCAATATAAGGGCCAAGTACAAATACC
510 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* *
14324785 CAACGCACATCATGCACGCACA-ACCCCCGCCCCCCGATCACCTGAACCCCAATGCCGTCGGTCA
575 CATCGCACATCATGC-CGCACACACCCCCGCCCCCCGATCGCCTGAACCCCAATGCCGTCGGTCA
* ** *
14324849 GGTTCTCTGACGATGCTTTGGCGATGGTTCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
639 GGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* * *
14324914 GAGCCCAGCATGTGCTACCATAACCCTTGGTCCGGTCCAATCTTAGATTGGGAATGAACTCCGTA
704 GAGCCCAGCATGTGCTACCGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
14324979 TGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAA-CATTTGTGCAGGCGTTC
769 TGCTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACCA-GTGTACGGGCGTTC
* * * * * * *
14325043 AGCCGGCTAGAGGGGCGAGATGCACAAGCCGAGGATCGACCAAGTCCCCCTCTACGTGCTGCCGA
833 AGTCGGCCAGAGGGGAGGGATGCGCAAGCCGAGGATCGACC-GGTCCCCCTCTGCGTGCTGCCGA
14325108 TCC
897 TCC
* * * *
14325111 TGCTACCGTAACCATCGGTCTGGTCTGATCTTAGACTGGGAATGAACTACATATGCCTAAGCCAA
1 TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCAA
*
14325176 CCGATGAAACGAGCGGGTGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
66 CCGATGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14325241 GCCGTGGATCGATAGGGTGGTAGGTGGGCTTGGGCACATCTTCATATTTCTACATGCCAATGCCA
131 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
*
14325306 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAT
196 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
* * *
14325371 GACTTGTTTTCTTTTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATATTTTAAAATTTTTT
261 GACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTT
* * * *
14325436 CGAAAGGAGCTTTGACCCTAGAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGTACAAAA
326 CGAAAGGAGTTTTGGCCCCAGAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAA
* *
14325501 AAAATCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGACCCCATTTC
390 AAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * * *
14325566 AAACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAA
455 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
14325631 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCGCACAT
520 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * *
14325696 TATGTCCGCACAGC-CCCCCGGCCCCCCGATTGTCGGAACCCTAATGCCGTTGGTCAGGTTTTCC
585 CATG-CCGCACA-CACCCCC-GCCCCCCGATCGCCTGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * * * *
14325760 GGCGATGCTCCGGTGATAGTGCCCCGGCGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAG
647 GACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* *
14325825 CATGTGCTACCGTAACCCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACACCGTATGCTTAGA
712 CATGTGCTACCGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * *
14325890 CTGAGAGTGAACTCCATATGCCTAAGTCAACCCAC-AAACCGAGCGTACGGGCGCTCAGTCGGCC
777 CTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACC-AGTGTACGGGCGTTCAGTCGGCC
* * * * * * * *
14325954 ATAGGGGTGGGATGCGGAAGCTGAGGATCAATCGGGTCCCCCTCTGCGTGCTGCTGATCT
841 AGAGGGGAGGGATGCGCAAGCCGAGGATCGA-CCGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * *
14326014 TGCTGCCGCAACCCT-TGTTTCGGTCCAATCTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCA
1 TGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCA
* * * *
14326078 ACC-A-AATAACAAGCGGGCGGAC--G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGT
65 ACCGATGA-AACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * *
14326137 AAGTCATTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGC
129 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
14326202 CATTTTTATGGCTTGTAAATTCATACAATG
194 CATTTTTATGGCTTGTAAATTCATACAATG
14326232 CCATTTTTTT
Statistics
Matches: 1773, Mismatches: 223, Indels: 70
0.86 0.11 0.03
Matches are distributed among these distances:
898 124 0.07
900 269 0.15
901 191 0.11
902 91 0.05
903 301 0.17
904 8 0.00
905 2 0.00
906 5 0.00
907 158 0.09
908 162 0.09
909 8 0.00
910 27 0.02
911 427 0.24
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (899 bp):
TGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCAA
CCGATGAAACGAGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGAC
GACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTT
CGAAAGGAGTTTTGGCCCCAGAATTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
AAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
GACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGCCGCACACACCCCCGCCCCCCGATCGCCTGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
TGCTACCGTAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGA
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACCAGTGTACGGGCGTTCAGTCGGCCAGAGG
GGAGGGATGCGCAAGCCGAGGATCGACCGGTCCCCCTCTGCGTGCTGCCGATCC
Found at i:14325900 original size:26 final size:26
Alignment explanation
Indices: 14325858--14325910 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14325848 CCAGTCCGAT
* *
14325858 CTTAGACTGGGAATGAACACCGTATG
1 CTTAGACTGAGAATGAACACCATATG
* *
14325884 CTTAGACTGAGAGTGAACTCCATATG
1 CTTAGACTGAGAATGAACACCATATG
14325910 C
1 C
14325911 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACACCATATG
Found at i:14327742 original size:709 final size:698
Alignment explanation
Indices: 14326236--14328096 Score: 2351
Period size: 709 Copynumber: 2.6 Consensus size: 698
14326226 ACAATGCCAT
* * * * * *
14326236 TTTTTTGGAAGGAGTTTTGGCCCAAACTTGGTCGACCTGATCCTTGTATTTCTGTTAGCATGCAG
1 TTTTTCGGAAGGAGTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * * *
14326301 AAAAAAAATTAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCTCA
66 AAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCA
* *
14326366 TTTTAGACACTTTAATGGCTACTGGGAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTG
131 TTTCAG--A--TTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTG
* * * *
14326431 TGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCAC
192 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGC
* *
14326496 ACCTCATGTGAGCACACCCCCCTGACC-CCCCTGATCG-TCGGAACCCCAATG---CCGTCA-G-
257 ACATCATGTGAGCACA-CCCCCT-ACCTCCCC-GATCGCT-GGAACCTCAATGCCTCCGTCAGGT
* * **
14326554 --TCAAG-TTCTCCGGCGATGGTGCCCCGACGAAGAAAAAT-ATGGCACCAGCACATGCCCAAGC
318 TCTCGAGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGA-GGCACCAGCACATGCCTGAGC
** * * *
14326615 CCAGCATGTGCTATCGTAACCCTCGGTCAGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGC
382 CCAGCATGTGCTGCCGCAACCCTCGGTCCGATCT-GATCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
14326679 CTAAGCCAACCGACGAAATGAGCGGGCGGGTGGGCCCTGCGCCAGCCAGAGAGACGGGATGTGCA
446 CTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCACTACGCCAGCCAAAGAGACGGGATGCGCA
* ***
14326744 AGCCATGGATCGATAGTGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
511 AGCCATGGATCGATAGGGTGGT--GTGGGTTTAGGCACATCTTCATATTTCTACAAGCCAATGCC
*
14326809 TTTTTTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
574 ATTTTTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
14326874 CGACTCATTTTCTATTTTCATGATTTTCGAAACTTTTTACGGTTTGGGATTTTTTAAAAT
639 CGACTCATTTTCTATTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTCAAAAA
* * *
14326934 TTTTTCGAAAGGAGTTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCAAGCA
1 TTTTTCGGAAGGAGTTTTGG-CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
14326999 CAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCC
65 CAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCC
* * *
14327064 ATTTCAGA-TAATAGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
130 ATTTCAGATTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGA
*
14327128 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGG-CAAGTACAAGTACCCATCGCAC
195 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG-GGCCAAGTACAAGCACCCATCGCAC
* * * *
14327192 ATCATGCGTGCACACCCCCTACCTCCTCGATCGCCTTGAACCTCAATGCCTTCCGTCAGGTTCTC
259 ATCATGTGAGCACACCCCCTACCTCCCCGATCG-CTGGAACCTCAATGCC-TCCGTCAGGTTCTC
* * * * ** * * * *
14327257 TGAGATGCTCTGGTGATGGTTCCCTGGTGAATAAAAATGCGGCACCAGTACATGCCTGAGTCCAG
322 -GAGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAG
*
14327322 CATGTGCTGCCGCAACCCTTGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
386 CATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
14327387 CCAACCGATGAAACGAGTGGGCGGGCGGGCAGGCGGGCACTACGTCGGCCAAAGAGACGGGATGC
451 CCAACCGACG-AA--A-TGAGCGGGC--G--GGCGGGCACTACGCCAGCCAAAGAGACGGGATGC
** *
14327452 GCAAGCTGTGGATCGATAGGGTGGT-TGGGTTTAGGC-CTATCTTCATATTTCTGCAAGCCAATG
508 GCAAGCCATGGATCGATAGGGTGGTGTGGGTTTAGGCAC-ATCTTCATATTTCTACAAGCCAATG
*
14327515 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
572 CCATTTTTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGCAA
** *
14327580 GACGACTTGTTCTT-TATTTTTCACGATTTTTAAAACTTTTTACGGTTTGGGATTTTTCAAAAA
637 GACGACTCATT-TTCTA-TTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTCAAAAA
* *
14327643 TTTTTCGGAAGGATTTTTGGCCACAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA
1 TTTTTCGGAAGGAGTTTTGGCC-CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * *
14327708 CAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTAGAAAAAATTG-CCCT
65 CAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCC
* * * *
14327772 ATTTCAAACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTGAAATGCTTTTTATGGGGGT
130 ATTTC--AGA--TTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGT
*
14327837 GTGACTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCG
191 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCG
* *
14327902 CACATCATGTGCGCACACCCCC--CCGGTCCCCCCGATCG-TAGGAACCTCAATGCCGTCGGTCA
256 CACATCATGTGAGCACACCCCCTACC--T--CCCCGATCGCT-GGAACCTCAATGCC-TCCGTCA
**
14327964 GGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGAGAAACCAGCACATGCCT
315 GGTTCT-CGA-GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCT
* * * * * *
14328029 GAGCCCAGCATGTGCTGCCACAACCCTCGGTCCAATCCGATCTTAAACAGGGAATGAACTCTGTA
378 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTA
14328094 TGC
443 TGC
14328097 TTAGACTGGG
Statistics
Matches: 1004, Mismatches: 117, Indels: 67
0.85 0.10 0.06
Matches are distributed among these distances:
692 8 0.01
693 19 0.02
694 120 0.12
695 2 0.00
697 7 0.01
698 19 0.02
699 103 0.10
701 2 0.00
702 2 0.00
703 112 0.11
704 3 0.00
706 1 0.00
707 9 0.01
708 116 0.12
709 159 0.16
710 2 0.00
711 51 0.05
712 2 0.00
713 128 0.13
714 27 0.03
715 112 0.11
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.27
Consensus pattern (698 bp):
TTTTTCGGAAGGAGTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
AAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCA
TTTCAGATTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAG
TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACAT
CATGTGAGCACACCCCCTACCTCCCCGATCGCTGGAACCTCAATGCCTCCGTCAGGTTCTCGAGA
TGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAATGAGCGGGCGGGCGGGCACTACGCCAGCCAAAGAGACGGGATGCGCAAGCCATGGAT
CGATAGGGTGGTGTGGGTTTAGGCACATCTTCATATTTCTACAAGCCAATGCCATTTTTATGGCT
TGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTC
TATTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTCAAAAA
Found at i:14328139 original size:25 final size:26
Alignment explanation
Indices: 14328078--14328140 Score: 103
Period size: 26 Copynumber: 2.5 Consensus size: 26
14328068 ATCTTAAACA
14328078 GGGAATGAACTCTGTATGCTTAGACT
1 GGGAATGAACTCTGTATGCTTAGACT
14328104 GGGAATGAACTGC-GTATGCTTAGACT
1 GGGAATGAACT-CTGTATGCTTAGACT
14328130 -GGAATGAACTC
1 GGGAATGAACTC
14328141 CGTTGCCTAA
Statistics
Matches: 36, Mismatches: 0, Indels: 4
0.90 0.00 0.10
Matches are distributed among these distances:
24 1 0.03
25 10 0.28
26 24 0.67
27 1 0.03
ACGTcount: A:0.29, C:0.16, G:0.29, T:0.27
Consensus pattern (26 bp):
GGGAATGAACTCTGTATGCTTAGACT
Found at i:14329734 original size:26 final size:26
Alignment explanation
Indices: 14329696--14329746 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14329686 CAGTCTGATC
*
14329696 TTAGACAGGGAATGAACTCCGTATGG
1 TTAGACAGAGAATGAACTCCGTATGG
*
14329722 TTAGACTGAGAATGAACTCCGTATG
1 TTAGACAGAGAATGAACTCCGTATG
14329747 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.16, G:0.27, T:0.25
Consensus pattern (26 bp):
TTAGACAGAGAATGAACTCCGTATGG
Found at i:14330616 original size:26 final size:26
Alignment explanation
Indices: 14330587--14330639 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14330577 TCGGTCCGAT
14330587 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14330613 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14330639 C
1 C
14330640 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14331521 original size:26 final size:26
Alignment explanation
Indices: 14331481--14331530 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14331471 CAGGTCTGAT
14331481 CTTAGACTGGAAATGAACTCCGTACG
1 CTTAGACTGGAAATGAACTCCGTACG
*
14331507 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGAAATGAACTCCGTA
14331531 TGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.22, G:0.24, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTACG
Found at i:14334175 original size:26 final size:26
Alignment explanation
Indices: 14334125--14334175 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14334115 CCAATCCGAT
**
14334125 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14334151 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATGAACTCCGTAT
14334176 ACCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14336882 original size:26 final size:26
Alignment explanation
Indices: 14336853--14336905 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14336843 CCAGTCCGAT
14336853 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14336879 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14336905 C
1 C
14336906 CTAACTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14337039 original size:904 final size:902
Alignment explanation
Indices: 14328942--14341950 Score: 16133
Period size: 904 Copynumber: 14.6 Consensus size: 902
14328932 CCAGCTTGTG
* * * *
14328942 CTACCGCAACCCTCGGTCTGAT-TCGATCTTAGACTGGGAATGAACTCTGTATGCGTAAGCCAAC
1 CTACCGCAACCCTCGGTCTGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * **
14329006 CAACGAAATGAGCGGTCGGACGGGCGGGCTG-GCACTACACCGGCCAGAGAGACGGGATGCGCAA
65 CGACGAAACGAGCGGGCGGGCGGGCGGGC-GAGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
* *
14329070 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC-CTATCTTCATATTTCTGCAAGCCAATGCC
129 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC-ATCTTCATATTTCTGCATGCCAATGCC
14329134 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
193 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
14329199 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
258 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTT
* * * * * * *
14329264 TCGGAATGAGTTTTGGCCCCAAACTTGGTAGATGTGATCATTTTATTTTTTTTCGCATGCACAAA
322 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAA
*
14329329 AAAATTCAGCTAAAAACGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
387 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
14329394 CAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGA
452 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
** *
14329459 GTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACA
517 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
14329524 TCATGTGCGCATACCCCCACCGGCCCCCCCGACCCCCCGATCATCGGAACCCCAATGCCG-CTGG
582 TCATGTGCGC--A----CA----CCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTC-GG
* * * * * ** **
14329588 TCAGCTTCTCCGGTGATGCTCCGAGGATGGTGCCTCGGTG-A-AAAAATGTAGCACCAGCACATG
636 TCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * * * * *
14329651 CTCGAGCCCAGTATGTGCTGTCGCAACCCTCGGTACAGTCTGATCTTAGACAGGGAATGAACTCC
701 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCC
* * * *
14329716 GTATGGTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGTGGGCGC
766 GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGC
* * * *
14329781 TCAGTCGGCCAGAGGGGTGGGATACGCAAGCCGGGGATCGGCCAGGTCCCCCTCTGCGTGCT---
831 TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCC
14329843 -A--C--
896 GATCCTA
* ** * * * *
14329845 C-A---CAACCCTCAGTCCAGT-TCGATCTTAGACTGGGAATGAACTCCATATACTTAAGCCAAC
1 CTACCGCAACCCTCGGTCTGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * ** *
14329905 CGACGAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGACCCACAAG
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* * **
14329970 CCGTGAATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAA
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC-A
* *
14330035 TTTTAAT-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGTC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14330099 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGATT-GGGATTTTTTAAATTTTTT
259 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGG-TTCGAGATTTTTTAAAATTTTT
* * * *
14330163 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGAGATCCTTGTACTTTTGTTGGCATGCACAGAA
323 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
* * ** *
14330228 AAATTTAGCTAGAAACTTAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTC
388 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
14330293 ATACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAG
453 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
14330358 TTCTCAAGGCTTGATGAGGGACAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
518 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * *
14330423 CATGTGCGCACACCCCCCTGGCTCCCCTGATCGTAGGAACCCTAATGCCGCCTGTCAGGTTCTCC
583 CATGTGCGCACACCCCCCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * ** *
14330488 AGCGATGCTCCGATGATGGTGCCCTGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAA
647 AGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC-A
* * *
14330553 GCATGTGCTGTCGTAACCCTCGGAT-CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
711 GCATGTGCTGCCGCAACCCTCGG-TCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * *
14330617 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTTAGCCGAC
775 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * *
14330682 CAGAGGGGCGGGATGTGCAAGCCGAGGATCGGCCGGGTCCCCCTCTGTGTGTTGCCGGTCCTG
840 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* ** * * *
14330745 CTACCACAACCCTCTTTCTGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACC
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
14330810 GACGAAACGA----GCGGACGGGCGGGC-A-CA--ATGCCGACCAGAGAGACGGGATGCGCAAGC
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
14330867 CGTGGATCGATAGGGTGGTAGGT-GGTTTAGGCACATCTTCATATTTC--CATGTGCCAATGCCA
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA--TGCCAATGCCA
* *
14330929 TTTTTATGGCTTGTAAATTCAGAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * ** * *
14330994 AACTCATTTTCTATTTTTCACGA-TTTTCACAACTTTTTTTGGTTTGGGATTTTTTAAAATTTTT
259 GACTCGTTTTCTATTTTTCACGATTTTTGA-AACTTTTTGCGGTTCGAGATTTTTTAAAATTTTT
* * * * *
14331058 TGGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCTTTGTATTTTTTTTGGCATGCACAAAA
323 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
* *
14331123 AAATTGAGCTAAAAACATCGAAGTGTACAAGATTTTGTGACCATTTGCAAAAAGTGTCCCCATTT
388 AAATTCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14331188 CAGACACTTTCATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
452 CAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14331253 AGTTCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCACAC
516 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
14331318 ATCATGTGCGCACA-CCCCCCGGCCCCCCGATC-ACTGGAACCCCAATGCCGTCGGTTAGGTTCT
581 ATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCT
* *
14331381 CCGGCGATGCTCCGACGATGGTGCCCC-AGCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCC
645 CCAGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
** * * *
14331445 CAGCATGTGCTATCGCAACCCTCGGT-CAGGTCTGATCTTAGACTGGAAATGAACTCCGTACGCT
709 CAGCATGTGCTGCCGCAACCCTCGGTCCA-GTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
* * *
14331509 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAAGCCACGAAACGAGCGTGCGGGCACTCAGTCG
773 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG
* **
14331574 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGTCCATGTCCCCCTCTGCGTGCT----A--C--
838 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * *
14331631 C-A---CAACCCTTGGTCGGGT-TCGATCTTAGACTGGGAATGAACTCCCTATTCCTAAGCCAAC
1 CTACCGCAACCCTCGGTCTGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *
14331691 CGACAAAATGAGCGGGCGGGCGAGC--G-G-GCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* * * * * ** *
14331752 CCGTGAATCGATGGGGTGGTAGGTGAGTTTACGCACATCTTCATATTTTTGTGTGCCAATGCCAA
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
** * *
14331817 TTTTACAGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
14331882 ACTCGTTTTCTATTTTTTATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAAGTTTTTT
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA--TTTTT
* * *
14331947 CGGAAGGAGTTTTGGCCCCAAACGTT-TTAGACGTGATCCTTGAATTTTTGTTGGCATGCACAAA
323 CGGAAGGAGTTTTGGCCCCAAAC-TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAA
14332011 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
387 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
14332076 CAAACACTTTCATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTG
452 CAGACACTTT-AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
14332140 AGTTCTCAAGATTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
516 AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
*
14332205 AT-ATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCT
581 ATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * ** **
14332269 CC-GACGATGCTCTGGCGATGGTGCCCTAACGAAGAAAAATATGGCACCAGCACATGCCCGAGCC
645 CCAG-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* *
14332333 CAACATGTGCTGCTGCAA-CC-C--T-CA----G----T---CT-GG--T---CT--G-AT-CTT
709 CAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * * ** * *
14332372 AGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAAGGAGCGTGTGCACGTTCAGCTGG
774 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * * * * * * * *
14332437 CCAGAGGGGCAGGATGTGCAAGCCGGGGACCAGCCGAGTCCCCCTCTACCTGCTACCGATCTTG
839 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
** * * * * *
14332501 CTGTCGCAACCCTTGGT-TCGGTCTGATCTTAGACTAGGAATGAACTTCATATGCCTAAGCCAAC
1 CTACCGCAACCCTCGGTCT-GGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
14332565 TGACGAAACGAACGGACGGGCGGGTGGGCGGGAACTACGTCGGCCAGAGAGACGGGATGCGCAAG
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* **
14332630 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCGTCATATTTCTGTGTGCCAATGCCAT
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* *
14332695 TTTTATGGCTTGTAGATTCATACAATGGTCCCTTAAGCCTACACGTGAAGTTTCATGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
*
14332760 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTTGAGATTTTTTAAAAGTTTTTC
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTTC
** * * *
14332825 GGAAGGAGTTTTGGCCCCAAACTTTTTAGTCGT-ATCCTTGTATTTTTATTGGCATGCACAAAAA
324 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAA
* * *
14332889 AATCCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTTA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
**
14332954 GACACTTTAATGGCTACAAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
14333019 TCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCACACATC
519 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
14333084 ATGTGCGCACA-CCCCCCGGCCCCCCGATC-ACTAGAACCCCAATGCCGTCGGTTAGGTTCTCCG
584 ATGTGCGCACACCCCCCCGGCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCA
*
14333147 GCGATGCT-CGACGATGGTGCCCC-AGCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAG
648 GCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
** * * *
14333210 CATGTGCTATCGCAACCCTCGGT-CAGGTCTGATCTTAGACTGGAAATGAACTCCGTACGCTTAG
712 CATGTGCTGCCGCAACCCTCGGTCCA-GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * *
14333274 ACTGGGAATGAACTTTCCGTATGCCTAAGTCAAGCCACGAAACGAGCGTGC-GGCACTCAGTCGG
776 ACTGGGAATGAAC--TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* **
14333338 CCAGAGGGGCGGGATGCGCAAGCC-GGGATCGTCCATGTCCCCCTCTGCGTGCT----A--C--
839 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * *
14333393 C-A---CAACCCTTGGTCGGGT-TCGATCTTAGACTGGGAATGAACTCCCTATTCCTAAGCCAAC
1 CTACCGCAACCCTCGGTCTGGTCT-AATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* *
14333453 CGACAAAACGAGCGGGCGGGCGAGC--G-G-GCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* * * * ** *
14333514 CCGTGAATCGATGGGGTGGTAGGTGAGTTTA-GCACATCTTCATATTTTTGTGTGCCAATGCCAA
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
** * *
14333578 TTTTACAGCTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * **
14333643 ACTCGTTTTCTATTTTTTATGATTTTTGAAACCTTTTAAGGTTCGAGATTTTTTAAAATTTTTTC
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTTC
* * *
14333708 -GAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTACTATTT-TTGGCATGCACAAAA
324 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCAAAAAA
* *
14333771 AAATTCAGCT--AAA-TTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTC
388 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
14333833 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
453 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14333898 TTCTCAAGGTTTGATGAGGGACAAGGGGCCAATATAAGGGCCAAGTACCAGTACCCATAGCACAT
518 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * *
14333963 GACGTGCGCCCACCCCCCCGGCCCTCCCGATCGTCGAAACCCCAATGGCATCGATCAGGTTCTCC
583 CATGTGCGCACACCCCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * * * * * *
14334028 AACGATGCTCCGGCCATGGTGCCCCGATGAAGAAAATTGCGGCACCACCACATG-CCGAACCTAG
647 AGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * **
14334092 CATGTGCTACCGTAACCCTCAGTCCAATCCGATCTTAGACTGGGAATGAACTTTGTATGCTTAGA
712 CATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * *
14334157 CTGGGAATGAACTCCGTATACCTAAGTCAACCCACGATACGAGCGTGCGGGCACTCAGTCGTCCA
777 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * *
14334222 GAGGGGCAGGATGCGAAAGCCGGGGATCGACTGGGTCCCCCTCTGCATGCTGCCGATCCTG
842 GAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * ** *
14334283 CTGCCACAACAATCGGTC-GGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
1 CTACCGCAACCCTCGGTCTGG-TCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* ** * * *
14334347 CGACGAAACGAGCAGGCGAACGGACGGG-TAGGCACTACGTCGGCCAGAGAGACGGGATGTGCAA
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGA-GCACTACGTCGGCCAGAGAGACGGGATGCGCAA
*
14334411 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
129 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14334476 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCACGTGAAGTTTCATGGCAAGAC
194 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
14334541 GACTCGTTTTCTATTTTTCACGATTTTTGTAACTTTTTACGGTTCTG-GATTTTTTAAAAGTTTT
259 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTC-GAGATTTTTTAAAA-TTTT
** * * * * *
14334605 TCAAAAGGTGCTTTAGCCCCAAACTTGGTAGAAGTGATCCATT-TATTTTTGTTGGCATGCACAA
322 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCAAAA
* * *
14334669 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCTATT
386 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
14334734 TCAGACACTTT-ATCGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGT
451 TCAGACACTTTAAT-GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
14334798 GAGTTATCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
515 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
*
14334863 CATCATGTGCGCACACCCCCCTCGACCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTT
580 CATCATGTGCGCACACCCCCC-CG-GCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTT
* ** * *
14334928 CTCCAACGTATTGCTCCTGGTGATGGTGCCCCGATGAAGGAAAATGCGGCACCGGTAGCA-ATTG
643 CTCCAGCG-A-TGCTCC-GACGATGGTGCCCCGACGAAGAAAAATGCGGCACC---AGCACA-TG
* * * *
14334992 CTCGAAGCCCAACATGTGCTTGCTGCGCAACCCTCAGT-CAGTCTGATCTTAGACT-GGAATGAA
701 CCCG-AGCCCAGCATGTGC-TGC--CGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAA
* * * * *
14335055 CTCCGTAT-CTTAGGA-TGGGGATGAACGCTGTAT-CCTAAGTCAACCCACAAAAAACGAGCATG
762 CTCCGTATGCTTA-GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC--GAAACGAGCGTG
* ** * *
14335117 CGGGCGCTCAGCCGGCC-GAGGGGCAGGATGCATAAGCCGGGGATCGGCCGGGTCCCTCTCTGCA
824 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCG
**
14335181 TGCTGTTGATCCTA
889 TGCTGCCGATCCTA
* * * * * * *
14335195 CTACCACAAGCCTTGGCCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * * *
14335260 GATGAAACGAGCGAGCGGGCGGGCAGGTGAGCACTTCGTCAGCCAGAGAGACAGGATGCGCACGT
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG-
* * * * *
14335325 CGTGTGGGGGGGGATAGATAGGGTTGTTA-GTGGG-TTAGGCACATCTTCATATTTCTGCGTCCC
130 C-CGT------GGATCGATAGGG-TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* * * * *
14335388 AATGCCATTTTTATGCCTTGTAAATTCATACAATGGTCTCTTAAGCCATCACGTTAAGTTTCAAG
187 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* *
14335453 GCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAA
252 GCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAA
* ** * * *
14335518 ATTTTTTCGGACGGAGTTTTGAACCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGCCAAG
317 A-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATG
*
14335583 CATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
381 CAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
14335648 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
446 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
14335713 GTGTGAGTTCTCAAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
511 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* ** *
14335778 CGCACATCATGTGCGCACACCCCCCTCAGCCCCCCCGATCACCGGAACCCTAATGCCGTCGGTCA
576 CGCACATCATGTGCGCACACCCCCC-C-GGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* * * * * * * *
14335843 GGTTCTCCGGTGATGCTCCAACGATGGTGCCCCAATGATGAAAAATACGGCACCAGCACATTCCC
639 GGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* ** * * ** **
14335908 GAGCCCAGCAGGTGCTGTGGGAACCCTCAGTCCAGTCTAATCTTAGACTATGAATGAACTCCGTA
704 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTA
* ** * *
14335973 TGCTTAGACTGGGGATGAACTATGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTTA
769 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
** * * *
14336038 ATCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATC-GCTCGGGTCCCCCTCTGTGTGCTGCCAA
834 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGC-CGGGTCCCCCTCTGCGTGCTGCCGA
14336102 TCCTA
898 TCCTA
* * * * * * *
14336107 CTGCCACAACCATCGATCTGGCCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACT
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * * *
14336172 AATGAAACGAGTGGGCGGGCGGGCGGGCGAGCACTTCGTCGACCGGAAAGACGGGATGCGCACGC
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * * * *
14336237 TGTGGATAGATAGGGTTGTTGGTGGGTGTAGGCACATCTTCATATTTCTGCGA-GCCAATGCCAT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC-ATGCCAATGCCAT
* * *
14336301 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTTAAGTTTCAAGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * *
14336366 ACTCGTTTTCTATTTTTTAGGATTTTTGAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
260 ACTCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTT
* ** * * *
14336431 TGGAAGGAGTTTTGAACCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGCCATGCATAAAA
323 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
*
14336496 AAAGTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
388 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14336561 AGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
453 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
** * *
14336626 TTCTTGAGGTTTGATTG-GGGATA-AGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACA
518 TTCTCAAGGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
14336689 TCATGTGTGCACACCCCCCCGGCACCCCCGATCGTCGGAGCCTCAACGCCGTCGGTCAGGTTCTC
582 TCATGTGCGCACACCCCCCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* *
14336754 TAGCGATGCTCCGACGATGGCGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
646 CAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
*
14336819 GCATGTGCTGCCGCAACCCTTGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
711 GCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* * * * * *
14336884 ACTGGGAATGAACTCCGTATGCCTAACTCAACCCACCAAACGAGCATACGGGCGCCCAGTCGGCC
776 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * *
14336949 AGAGGGGCGGGATGCGCAAGCCAGGGATCGGCCTGGTCCCCCTCTGCATGCTGCCGATCCTG
841 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * * *
14337011 CTACTGCAAACCTCGGTCTGGTCCAATCTTATACTGGGAATGAACTCCGTATGCCTAAGCTAACT
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* *
14337076 GACGAAACGA--------ACGGGC--G-G-GCATTACGTCGGCCAGAGAGACGGGATGCGCAAGC
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * *
14337129 CTTCGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAGTGCCATT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
14337194 TTTATGGCTTGTAAATTCATACAATGGTCCCTGAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
196 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
14337259 CTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCCGTTCGGGATTTTTTAAAATTTTT-GG
261 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTCGG
* *
14337323 AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAACAAAA
326 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAA
* *
14337388 TTCAGCTAAAAACTTGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
391 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14337453 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTCTAAGGGGGTGTGAGTTC
456 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
14337518 TCAAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACTAGCATCCATCGCACATCAT
521 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * *
14337583 GTGCGCACA-CCCCCCGGCCCCCCCTGATCGTTGGAACCCCAATACCGCCGGTCAGGTTCT-C--
586 GTGCGCACACCCCCCCGG-CCCCCC-GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAG
* * **
14337644 C---G----G-CGATGGTGCCCCGACGAAGAAAAATACGACACCAGCACATGCTTGAGCCCAGCA
649 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
**
14337701 TGTG-TGGCCGTGACCCTCGGTCC-G---G----T---C------TG-A-T-C-T-T-C---GAC
714 TGTGCT-GCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
* * * *
14337739 TGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAACGAGTGGGCGCTCAGCCGGCCAG
778 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * *
14337804 AGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCTATCCTA
843 AGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * *
14337864 CTGCCGCAACCCTCGGTCGGGTCTAATGTTAGACTGGGAATGAACTCCGCATGCTTAAGCCAACC
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
14337929 GACGAAACGAGCGGGCGGGCAGGCAGGCGAGCACTACGTCGGCCAGAGAGATGGGATGTGCAAGC
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * * *
14337994 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTCCATATTTCTACATGCAAATGCCATT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
14338059 TTTATTGCTTGTAAATTCATACAATGGTCCCTTAAG-CTGTCACGTGAAGTTTCATGGCAAGACG
196 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT-TCACGTGAAGTTTCATGGCAAGACG
* * * *
14338123 ACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCCGTTCGGGATTTTTTAAAATTTTTTG
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTCG
*
14338188 GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAA
* *
14338253 ATTCAGCTAAAAACTCGAAGTGTACAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAG
390 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
14338318 ACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * *
14338383 CTCAAGGTTTGATGAGGGATACGGGGCCAATATAAGGGCCAAGTACTAGCATCCATCACACATCA
520 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
14338448 TGTGCGCACA-CCCCCCGGCCCCCCCGATCG-CTGGAACCCCAATGCCG-C---C-GG---T-CA
585 TGTGCGCACACCCCCCCGG-CCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCA
* * ** **
14338502 G-G-TTCTCCGACGATGGTACCCCGGTGAAGAAAAATGCGGCACCAGCACATGCTTGAGCCCAGC
648 GCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
**
14338565 ATGTG-TGGCCGTGACCCTCGGTCC-G---G----T---C------TG-A-T-C-T-T-C---GA
713 ATGTGCT-GCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * *
14338603 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGAGTGGGCGCTCAGCCGGCCA
777 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* *
14338668 GA-GGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTA
842 GAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * * * * **
14338728 CTGCCGTAACCCTCGGTCGGGTCTAATGTTAGACTGGGAATGAACTCCGCATGCTTAAGCCGATT
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
14338793 GACGAAACGAGCGGGCGGGCAGGCAGGCGAGCACTACGTCGGCCAGAGAGATGGGATGTGCAAGC
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * * *
14338858 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTCCATATTTCTACATGCAAATGCCATT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
14338923 TTTATTGCTTGTAAATTCATACAATGGTCCCTTAAG-CTGTCACGTGAAGTTTCATGGCAAGACG
196 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT-TCACGTGAAGTTTCATGGCAAGACG
* *
14338987 ACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTTC-AGGAGTTTTTT-AAATTTTT
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GA-TTTTTTAAAATTTTT
* *
14339050 CGGTAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAGAAAA
323 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
** * * * *
14339115 AAATTCAGCTAAAAACTTAAAGTGTATAAGATTTTGTAACCTTTTGAAAAAAGTGTCCCTATTTC
388 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
14339180 GGACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTGTTTAAGGGGGTGTGAG
453 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
** * * *
14339245 TTCTCCAA-GTTTGATGAGGGATAGGGGGTGAAAATAAGGGTCAAGTACCAGTACCCATCGCACA
518 TTCT-CAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* ** * * *
14339309 TCATGTGCACACACCCCCTTGGCCCCTTCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
582 TCATGTGCGCACACCCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * * *
14339374 CAGTGATGCCCCAACGATGGTGCCCCGACGAAGAAATATGTGGCACCAGCACAAGCCCAAGCCCA
646 CAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * *
14339439 GCATGTGTTGCCACAACCCTTGGTCCAGTCCGATCTTGGACTGGGAATGAACTCCGTATGCTTAG
711 GCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* ** *
14339504 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTATGGGCGCTCAGCCAGCC
776 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * *
14339569 AGAGGAGCGAGATGCGCAAGCCGGGGATCGGTCGAGTCCCCCTCTGCGTGCTGCCAATCCTA
841 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * * *
14339631 CTACCACAACCCTCAGTCAGGTCTAATGTTAGACTGGAAATGAACTCCGTATGCCTAACCCAACC
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * *
14339696 GACAAAACGAGCGGGCGGACGGGCAGGCGGGCACTACATCGGCCAGAGAGATGGGATGTGCAAGC
66 GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
* * * * *
14339761 CGTGGATCGATAAGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTACGTGCAAATGCCATT
131 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* *
14339826 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCGTCACGTGAAGTTTCATGGCATGACGA
196 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
14339891 CTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-AGGAGTTTTTAAAATTTTTCG
261 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTCG
*
14339955 GTAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-AAAAAAA
* * ** *
14340020 AATTCAGCTAAAAACTTGAAGTGTATAAGATTTTGCAACCTTTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14340085 GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGTTGTTTAAGGGGGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
14340150 TCTCCAA-GTTTGATGAGGGATAGTGGTG--AAAATAAGGGTCAAGTACCAGCACCCATCGCACA
519 TCT-CAAGGTTTGATGAGGGATAG-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* ** * *
14340212 TCATGTG-GACACACCCCCCCGGCCCCTCGATCACCGGAACCCCAATGCCGCCAGTCAGGTTCTC
582 TCATGTGCG-CACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * * * *
14340276 CAGTGATGCCCCAACGATGGTGCCCCGACGAAGAAATATGTGGCACCAGCACAAGCCCAAGCCTA
646 CAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * *
14340341 GCATGTGCTGTCGCAACCCTTGATCCAGTCCGATCTTGGACTGGGAATGAACTCTGTATGCTTAG
711 GCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* ** *
14340406 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGATGCTCAACCGGCC
776 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * * * * ** *
14340471 AGAGGGGTGGGATACGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGTGTACTATCGATCCTG
841 AGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
* * * * * * *
14340533 CTGCCGTAACCCTCGAT-TCGATCTGATCTTAGACAGGGAATGAACTTCGTATGCCTAAGCCAAC
1 CTACCGCAACCCTCGGTCT-GGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* ** * * ** *
14340597 CGACGAAACAAGCGGGCGGGCATGCGGACGGGCACTACACCGGCCAGAGAGACGGGATGCGTAAG
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* * *
14340662 CCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAATTCTACATGCCAATGCCAT
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* * * * * *
14340727 TTTAATGGTTTGTAAATTCATGCAATTGTCCCTTATGCCTTCGCGTGAAGTTTCATGGCAAGACG
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* ** *
14340792 ACTCCTTTTCTATTTTTCATAATTTTTGAAACTTTTTGCGGTTCGAGATTTTTGAAAATTTTTTC
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTTC
*
14340857 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTT-TTGGCATGCAAAAAAA
324 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAA
* * * *
14340921 AATTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTCGAAAGAACTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
14340986 GACACTTTAATGGCTACTGGCAGCAAACATGTAAAATCTCAAATTGCTCTTTAAGGGGGTGTGAG
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA-TGCTCTTTAAGGGGGTGTGAG
* *
14341051 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA-CAGCAGCCATCGCACAT
518 TTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14341115 CATGTGCGCACACCCCCCCCGGCCCCCCTGATCG-CTAGAACCTCAATGCCGCCGGTCAGGTTCT
583 CATGTGCGCACA-CCCCCCCGGCCCCCC-GATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCT
* * * *
14341179 CCGGCGACGCTCTGACGATGGAGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
645 CCAGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * *
14341244 ATCATGTG-TGGCCGCAACCCTCGATCCGGTTCGATCTTAGACTGGGAATGAACTCCTTATGCTT
710 AGCATGTGCT-GCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTT
* * *
14341308 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAAGGAGCGTGCAGGTGCTCAGCCGG
774 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
** * * ** *
14341373 CCAGAGGGGCGGGACACACAAGCCGAGGATCGATCGGGTCCCCCTCTGTGTGCTGCCGATCCTA
839 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
** * * * * * *
14341437 CTGTCGCAACCCTCAGTCTAGTCTGATATTAGACTGGGAATGAAC-CCTGTATACCTAAGCTAAC
1 CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCC-GTATGCCTAAGCCAAC
* * * * ** *
14341501 CGACGAAACGAGCAGTCGGGCAGGCGGGCGGGCACTACACCGGCCAGAGAGACGTGATGCGCAAG
65 CGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAG
* * * ** **
14341566 CCGTGGATCGATAGAGTGGTAGGTCGCTTTAGGCATGTCTTCATATTTCTATATGCCAATGCCAT
130 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* *
14341631 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGTAAGACT
195 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * *
14341696 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGATTCAAGATTTTTTAAAATTTTTTC
260 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTTC
* * *
14341761 GGAAGGAGTTTT-GTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATTCAAAAAAA
324 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAA
*
14341825 ATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14341890 GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGTTGTTTAAGGGGGTGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
14341951 AAAATCGCAC
Statistics
Matches: 10686, Mismatches: 1133, Indels: 574
0.86 0.09 0.05
Matches are distributed among these distances:
853 175 0.02
856 1 0.00
857 3 0.00
858 1 0.00
859 1 0.00
860 3 0.00
861 6 0.00
862 105 0.01
863 2 0.00
864 616 0.06
865 420 0.04
866 285 0.03
868 1 0.00
869 2 0.00
870 3 0.00
871 2 0.00
872 2 0.00
873 2 0.00
874 130 0.01
875 92 0.01
876 248 0.02
877 49 0.00
878 210 0.02
879 68 0.01
880 209 0.02
881 49 0.00
882 220 0.02
883 220 0.02
884 74 0.01
885 2 0.00
886 71 0.01
887 221 0.02
888 292 0.03
889 349 0.03
890 90 0.01
891 56 0.01
892 333 0.03
893 9 0.00
894 244 0.02
895 299 0.03
896 117 0.01
897 124 0.01
898 314 0.03
899 418 0.04
900 122 0.01
901 142 0.01
902 721 0.07
903 772 0.07
904 1244 0.12
905 187 0.02
906 247 0.02
907 33 0.00
909 12 0.00
910 24 0.00
911 62 0.01
912 377 0.04
913 67 0.01
914 17 0.00
915 12 0.00
916 28 0.00
917 6 0.00
918 4 0.00
919 448 0.04
920 19 0.00
921 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (902 bp):
CTACCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTCGG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCG
ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
TGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
GGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTA
Found at i:14339942 original size:26 final size:23
Alignment explanation
Indices: 14339913--14339966 Score: 63
Period size: 26 Copynumber: 2.2 Consensus size: 23
14339903 TTTTCACGAT
*
14339913 TTTTGAAACTTTTTACGGTTCAGGAG
1 TTTTGAAAATTTTT-CGG-T-AGGAG
*
14339939 TTTTTAAAATTTTTCGGTAGGAG
1 TTTTGAAAATTTTTCGGTAGGAG
14339962 TTTTG
1 TTTTG
14339967 GCCCCAAACT
Statistics
Matches: 25, Mismatches: 3, Indels: 3
0.81 0.10 0.10
Matches are distributed among these distances:
23 9 0.36
24 1 0.04
25 3 0.12
26 12 0.48
ACGTcount: A:0.22, C:0.07, G:0.22, T:0.48
Consensus pattern (23 bp):
TTTTGAAAATTTTTCGGTAGGAG
Found at i:14341315 original size:26 final size:26
Alignment explanation
Indices: 14341279--14341331 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14341269 CCGGTTCGAT
*
14341279 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14341305 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14341331 C
1 C
14341332 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14342161 original size:26 final size:26
Alignment explanation
Indices: 14342125--14342177 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14342115 TCGGTCTGAT
*
14342125 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
14342151 CTTAGACTGGGAATAAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
14342177 C
1 C
14342178 CTAAGCCCAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:14348510 original size:13 final size:12
Alignment explanation
Indices: 14348477--14348507 Score: 62
Period size: 12 Copynumber: 2.6 Consensus size: 12
14348467 CACGATCGAG
14348477 GGGCCAATATAA
1 GGGCCAATATAA
14348489 GGGCCAATATAA
1 GGGCCAATATAA
14348501 GGGCCAA
1 GGGCCAA
14348508 ATACCAACAC
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 19 1.00
ACGTcount: A:0.39, C:0.19, G:0.29, T:0.13
Consensus pattern (12 bp):
GGGCCAATATAA
Found at i:14348724 original size:26 final size:26
Alignment explanation
Indices: 14348695--14348745 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
14348685 GGTCCGATCC
14348695 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
* *
14348721 TAGATTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
14348746 CTAGGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:14350495 original size:26 final size:26
Alignment explanation
Indices: 14350466--14350518 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14350456 CCGGTCCTAT
14350466 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14350492 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14350518 C
1 C
14350519 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14351073 original size:864 final size:881
Alignment explanation
Indices: 14348489--14351444 Score: 3177
Period size: 878 Copynumber: 3.4 Consensus size: 881
14348479 GCCAATATAA
* * * * *
14348489 GGGCCAATAT-AAGGGCCAAATACCAACACCCATCACACATCATGTGCGCACACACCCCCCGATC
1 GGGCCAATATAAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACG--CACACCCCCCG-GC
* * * * * *
14348553 CCCTCGATC-CCTGAATCCCCAATGCCACCGATCAGATTC-TCTGACGATGCTCTGGCGATGGTG
63 CCCCCGATCGCCGGAA-CCCCAATGCCGCCGGTCAGGTTCTTC-GACGATGCTC-GACGATGGTG
** * * * * * * * * *
14348616 CCTAGGCGAAAAAAAATGTGACACCAGCATATGCCTGAACCCAGCATGTGCTGTCGTAACCCTAG
125 CCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
* *
14348681 GTCCGGTCCGATCCTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAAC-TCTGTATG
190 GTCCGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTTC-GTATG
* * ** * * * * * *
14348745 CCTAGGTCAACCAATAAAACGAGCGTACAGGCGCTCAGTCGGCCCGAGGGGCGAGATGCGCAAGC
253 CCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* ** * * * * * * *
14348810 TGGGGATCGATCGGGTCCCCATCTGTGTGTTGCCGATCCTGCTGCCCCAACCCTCGATCTGGTCT
318 CGGGGATCGGCCGGCTCCCCCTCTGCGTGCTGCCGATCCTACT-ACACAA-CCTC-A---GGTC-
* * * * *
14348875 GATCTTAGACTGGGAATGAACTCCGTAT-GCCTAAGCCAACCGATGA---AACGAGC-GGG-CGG
376 GATC-T--ACT-AGAACGAGCTCCGCATAG--T-AGCC-A-TGATGAGCGAACGA-CTGGGACGG
* * * * * *
14348934 GCGGGGACTACGCCGGCCAAAGAGACGGGATGCACAAG-TCGTGGATTGATAGGGTGGTAGGTGG
431 TC-CGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCT-GTGGATCGATAGGGTGGTAGGTGG
* *
14348998 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATACCA-TTTTATG-GCTTCTAAATTCGA-ACA
494 GTTTAGGCACATCTTCATATTTCT-CGTGCCAATGCCATTTTTA-GAGCTTATAAATTC-ATACA
* * * * * *
14349060 ATTGTCCCTTAAGCCTTCACGTTAAGTTTCTTGGCAAGATGACTCATTTTTTATTTTTCATGATT
556 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATT
* * *
14349125 TTTGAAACTTTTTACGGTTGGGGATTTTTTAAAAATTTTTT-GGAAGGAGTTTTGGCCCCAAACA
621 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACT
* *
14349189 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCCAAAAACTCAAAGTG
686 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTG
* *
14349254 TACAAGATTTTGTGACCATTTGAAAAAAGTGACCCCATTTCAGACACTTTAATGGTTACTGGCAG
751 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
14349319 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGGTT-TCGAGG-TTGATGAGGAATA
816 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA-GTTCTCGAGGTTTGATGAGGAATA
14349382 GG
880 GG
*
14349384 GGGCCAA-ACCTATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
1 GGGCCAATA--TA-AAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCGGC
* *
14349448 CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATGCTTCGACGATGGTGCC
63 CCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGC-TCGACGATGGTGCC
* *
14349513 CCGGTGAAGAAAAAT-TCGGCACCAGCACATGCCCCAGCCTAGCATGTGCTGCCGCAA-CC-C--
127 CCGGTGAAGAAAAATGT-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
*
14349573 T-CGG-------T---CT--G---G---TCCG-AT-CTTAGAATGGCAATGAACTTCGTATGCCT
191 TCCGGTCCATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTTCGTATGCCT
* * * * * * * *
14349617 AAGTTAACCCACGAAACCAGCATGCGGGCGTTCAGTCGGCCAGAAGGGCGGG-TGCGCAAGTCGG
256 AAGTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * *
14349681 GGATCGGTCGGCTCCTCCTCTGCGTGCTGCTGATCCTACTACTACAACTCTCAGTCTGGTCTGAT
321 GGATCGGCCGGCTCCCCCTCTGCGTGCTGCCGATCCTACTAC-ACAAC-CTCA----GGTC-GAT
* * * * *
14349746 CTTAGTCTAGGAATGAGCTCCGTATACGTAAGCCAACCGATGAAATGAGCGGACGAGTGGGAGGG
379 C-TA--CTA-GAACGAGCTCCGCATA-GT-AG----CC-ATG--ATGAGCGAACGACTGGGACGG
** * * * *
14349811 TGGGCACTACGCCGGCCAGAGAGGCAGGATGCGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGT
431 TCCGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGT
* *
14349876 TTAGGCACATCTTCATATTT-TCGCATACCAATGCCATTTTTA-ATGGCTTATAAATTCTTACAA
496 TTAGGCACATCTTCATATTTCTCG--TGCCAATGCCATTTTTAGA--GCTTATAAATTCATACAA
*
14349939 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTGATGATTT
557 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
* * * *
14350004 TTGAAACTTTTTGCGGTTCGGGATTTTTT-AAACTTTTTTCGGAATGATTTTTGGTCCCAAACTT
622 TTGAAACTTTTTACGGTTCGGGATTTTTTAAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTT
* * * *
14350068 GGTAGACGTGATCCTTGTATTTTTTTTGGCTTGCACAAAAAATTTCAGCTAAAAACTCCAAGTGT
687 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGT
* * * *
14350133 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAAAGGCAACTGGCAAC
752 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
14350198 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGG
817 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGAATAGG
* *
14350263 GGGCCAATATAAAGGGGCCAAGTACCAGCACCCATCACACATCATGTACGCATACCCCCCGGCCC
1 GGGCCAATATAAA-GGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCGGCCC
**
14350328 CCTCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGCGT
65 CC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCT-CGACGATGGTGCCC
* * * * *
14350393 C-GCGAAGAAAAATGTGACACCAGCACATTCTCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTC
128 CGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* *
14350457 CGGTCCTATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTA
193 CGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTTCGTATGCCTA
* * *
14350522 AGTCAACCCACGAAACGAACGTGTGGACGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
257 AGTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
14350587 GATCGGCCAGG-TCCCCCTCTGCGTGCTGCCGATCCTACTAC-C-A-C-CA-G-C-A-C-A-T-G
322 GATCGGCC-GGCTCCCCCTCTGCGTGCTGCCGATCCTACTACACAACCTCAGGTCGATCTACTAG
** ** *
14350640 CCCGAGC-CCAGCAT-GT-G-C-TG-T-AGC-AACG-CTCGGTCCGGTCCG-A-T-CGCCGACCA
386 AACGAGCTCC-GCATAGTAGCCATGATGAGCGAACGACT-GGGACGGTCCGCACTACGCCGGCCA
14350693 GAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
449 GAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*
14350758 TTCTACGTGCCAATGCCATTTTTAGAGAC-TGTAAATTCATACAATGGTCCCTTAAGCCTTCACG
514 TTCT-CGTGCCAATGCCATTTTTAGAG-CTTATAAATTCATACAATGGTCCCTTAAGCCTTCACG
* *
14350822 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCA
577 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
* * ** * *
14350887 AGATTTTTTAAAAATTTTTTTCGAAAGGATTTTTGGCCCCAAACTTCTTAGAAGTGATCC-TCTA
642 GGATTTTTTAAAAA-TTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA
*
14350951 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGCGACCATT
706 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATT
* * *
14351016 TGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACAGGCAGCAAACTTGTAAAATCTCAAA
771 TGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA
**
14351081 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGAATAAA
836 TGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGAATAGG
* *
14351127 TGGCCAATAT-AAGGGCCAAGTACCAACACCCATCGCACATCATGTACGCACACCCCCCTGGCCC
1 GGGCCAATATAAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCC-GGCCC
* *
14351191 CCCTGATCGCCAGAACCCCAATACCGCCGGTCAGGTTC-TC--CGA---T----GATGGTGCCCC
65 CCC-GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCTCGACGATGGTGCCCC
* * *
14351246 GGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCACAACCCTTGGTCC
129 GGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
* *
14351311 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCTTAA
194 GGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTTCGTATGCCTAA
* * * * * *
14351376 GTCAACCCATGAGACGAACGTGCGGGCGCTCAGCCCGCCAGAGGGGCGAGATGCGTAAGCCGAGG
258 GTCAACCCACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
14351441 ATCG
323 ATCG
14351445 ATCGGGTCCC
Statistics
Matches: 1769, Mismatches: 209, Indels: 208
0.81 0.10 0.10
Matches are distributed among these distances:
852 9 0.01
853 177 0.10
857 1 0.00
860 3 0.00
862 46 0.03
863 144 0.08
864 263 0.15
865 42 0.02
866 5 0.00
867 12 0.01
868 85 0.05
869 64 0.04
870 5 0.00
871 5 0.00
872 5 0.00
873 4 0.00
874 4 0.00
875 1 0.00
876 90 0.05
877 22 0.01
878 380 0.21
879 84 0.05
880 2 0.00
881 2 0.00
882 4 0.00
883 11 0.01
885 1 0.00
888 1 0.00
890 4 0.00
891 3 0.00
893 1 0.00
894 7 0.00
895 97 0.05
896 21 0.01
898 35 0.02
899 3 0.00
900 1 0.00
902 5 0.00
903 3 0.00
904 68 0.04
905 47 0.03
906 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (881 bp):
GGGCCAATATAAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCGGCCCC
CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCTCGACGATGGTGCCCCGG
TGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
TCCATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTTCGTATGCCTAAGTC
AACCCACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
GGCCGGCTCCCCCTCTGCGTGCTGCCGATCCTACTACACAACCTCAGGTCGATCTACTAGAACGA
GCTCCGCATAGTAGCCATGATGAGCGAACGACTGGGACGGTCCGCACTACGCCGGCCAGAGAGAC
GGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTCGT
GCCAATGCCATTTTTAGAGCTTATAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
ATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT
AAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
CATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
GGGGGTGTGAGTTCTCGAGGTTTGATGAGGAATAGG
Found at i:14351348 original size:26 final size:26
Alignment explanation
Indices: 14351319--14351374 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
14351309 CCGGTCCGAT
14351319 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14351345 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14351371 CTTA
1 CTTA
14351375 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14353593 original size:714 final size:713
Alignment explanation
Indices: 14352422--14354607 Score: 3143
Period size: 715 Copynumber: 3.1 Consensus size: 713
14352412 CTATCGATCC
* *
14352422 TGCTGCTGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
1 TGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
14352487 CTGGGGA-AACAAGCGGGCGGGTGGGTAGGCGGGCATTACACCGGCCAAAGAGACGGGATGTGCA
66 C---CGACAA-AA-CGAGCGGGTAGG-CGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
**
14352551 AGCCGTGGATCGAT-GCATGGTAGGTGGGTTTAGGCACATCTTCATTATTTTCTATG-GCCAATT
125 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA-TA-TTTCTATGTGCCAA-T
14352614 GCCATTTTTATGGGCTTGT-AA-TCATA-AG-GGTCCCTTAAGCCTTCACGTGAAGTTTCATTGC
187 GCCATTTTTAT-GGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGC
* * * * * *
14352675 AAGGACCATTCGTTTTCTATTTTTCTTGATTGTTGAAACTTTTTACGGTTCGGGA--TTTTAAAA
251 AA-GACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * * * * *
14352738 TTTTTTTTCGGAAGGAGTTTTTGGCCCCAAAGTT-GCAAACGTGATACTTGTA--TTTATTGGCA
315 -TTTTTTT-GGAAGG-GGTTTTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCA
* *
14352800 CGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
377 TGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
14352865 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
442 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
14352930 GGGTGAGAGATCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
507 GGGTGAGAGATCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC
* **
14352995 ATCGCACCTCATGTAAGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCTAGTCA
572 ATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCTAGTCA
*
14353060 GATTCTCTGGCGATGCTCCGACGGTGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCTC
637 GATTCTCTGGCGATGCTCCGACGGTGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCC
14353125 GAGCCCAGCATG
702 GAGCCCAGCATG
* ** *
14353137 TGCTGCTGCAACCCTCGGTCTGGTTTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
14353202 CCGACAAAACGAGCGGGTAGGCGGCCGAGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCG
66 CCGACAAAACGAGCGGGTAGGCGG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
14353267 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTT
130 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTT
14353332 TATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACT
195 TATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACT
*
14353397 CATTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGA
260 CATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGA
* ** *
14353462 AGGGGTTTTGGCCCCAAACTTGGTATATGTGATCCTTGTATTTTTTTTGGTGTGCACAAAAAAAG
325 AGGGGTTTTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
* *
14353527 TCAGCCAAAAACTCAAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
390 TCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
14353592 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCAGAGATCT
455 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCT
* * *
14353657 TGAGGTTTGATGAGGGATAGCGGGCCAATATAAGGGCCAAGCACCAGTACCCATCGCACATCATG
520 TGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
** * *
14353722 TGCGCACACCCCCCTGGCCCCTTCGATCGTCAGAACCCCAATGCCGC-AGGTCAGGTTCTCTGGC
585 TGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGCTA-GTCAGATTCTCTGGC
* *
14353786 GATGCTCCGACGGTGGTGTCCCGACGAAA-AAAAATGCGGCACCAGCACATGCCCAAGCCCAGCA
648 GATGCTCCGACGGTGGTGCCCCGAC-AAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
14353850 TG
712 TG
* * *
14353852 TGCTG-TCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
1 TGCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
14353916 ACCGACAAAACGAGCGGG-CGAACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
65 ACCGACAAAACGAGCGGGTAG-GC-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
14353980 CGTGGATCAATAGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTATGTGCCAATACCATT
128 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATT
* * *
14354045 TTTATGGCTTGTAAATTCGTACAGTGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGA
193 TTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGA
* * * *
14354110 CTCATTTTCTATTTTTCATGATTTTTAAAAGTTTTTGTGGTTCGGGATTTTTTAAATTTTTTTTG
258 CTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTG
* * *
14354175 GAAGGGGTTTTCGTCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
323 GAAGGGGTTTTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
*
14354240 ATTTAGCTAAAAACT-AGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
388 ATTCAGCTAAAAACTCA-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
14354304 AACACTTTAATGGCTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
452 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGA
*
14354369 TCTTGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
517 TCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * ** *
14354434 ATGTGCGCACACCCCCCCAGCACCCCCGATCGTCGGAACCCCAATGTTGCTGGTCA-AGTTCTC-
582 ATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCTAGTCAGA-TTCTCT
*
14354497 --CGA-----CGA---TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
645 GGCGATGCTCCGACGGTGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
14354552 CATG
710 CATG
* * * * *
14354556 TGCTACCGTAACCCTTGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGT
1 TGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGT
14354608 CAGCTTAGAC
Statistics
Matches: 1335, Mismatches: 111, Indels: 61
0.89 0.07 0.04
Matches are distributed among these distances:
703 2 0.00
704 92 0.07
707 3 0.00
709 7 0.01
710 24 0.02
711 81 0.06
712 102 0.08
713 44 0.03
714 227 0.17
715 742 0.56
716 11 0.01
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (713 bp):
TGCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACAAAACGAGCGGGTAGGCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACTC
ATTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAA
GGGGTTTTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCTT
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCTAGTCAGATTCTCTGGCGAT
GCTCCGACGGTGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
Found at i:14354614 original size:26 final size:26
Alignment explanation
Indices: 14354585--14354637 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14354575 CCGGTCCGAT
14354585 CTTAGACTAGGAATGAACTCCGTCAG
1 CTTAGACTAGGAATGAACTCCGTCAG
*
14354611 CTTAGACTGGGAATGAACTCCGTCAG
1 CTTAGACTAGGAATGAACTCCGTCAG
14354637 C
1 C
14354638 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.25, T:0.23
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTCAG
Found at i:14356019 original size:886 final size:868
Alignment explanation
Indices: 14353858--14357287 Score: 4244
Period size: 894 Copynumber: 3.9 Consensus size: 868
14353848 CATGTGCTGT
** * * * *
14353858 CGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACA
1 CGCAACCCTCCGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
14353923 AAACGAGCGGGCGAACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
66 AAACGA----GCGAGCGGGCAGGCACTACGCCGGCCAGAGAGACAGGATACGCAAGCCGTGGATC
* * * *
14353988 AATAGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTATGTGCCAATACCATTTTTATGGC
127 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGC
* * * *
14354053 TTGTAAATTCGTACAGTGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCATTTT
192 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * ** * *
14354118 CTATTTTTCATGATTTTTAAAAGTTTTTGTGGTTCGGGATTTTTTAAATTTTTTTTGGAAGGGGT
257 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGGGT
* * * * *
14354183 TTTCGTCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCT
322 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
14354248 AAAAACT-AGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
387 AAAAACTCA-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
14354312 AATGGCTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
451 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGG
*
14354377 TTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
516 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * ** *
14354442 ACACCCCCCCAGCACCCCCGATCGTCGGAACCCCAATGTTG-CTGGTCAAGTTCTC--CGA----
581 ACA-CCCCCCGGC-CCCCCGATCATCGGAACCCCAATGCCGTC-GGTCAGGTTCTCTACGATGCT
*
14354500 ----CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTA
643 TCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * *
14354561 CCGTAACCCTTGGTCCGGTCCGATCTTAGACTAGGAATGAACTCCGTCAGCTTAGACTGGGAATG
708 CCGCAACCCTTGGTCCAGTCTGATCTTAGACTAGGAATGAA---C-T---C-----C---G--T-
* * * *
14354626 AACTCCGTCAGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAGAGGGACGG
755 -A-----T--GCCTAAGT-AACCCATGAAACGAGCGTGCGGGCGCTCAGCCGG-CAGAGGGGCGG
* * ** * *
14354691 AATGCGTAAGCCGGGGATCGGTCGGGTCCCCTTCTGCGTGCT-A---CTG-ATCCTACTGT
810 GATGCGCAAGCCGGGGATCGACCAGGTCCCC-TCTGCGTGCTGATCGCTGCA-CCTACTGC
* * * * * *
14354747 TGCAACCCTCCATCCGGTCTAATCTTAGACTGGGAATAAACTCCGTAT--CGAAGCCAACTGACG
1 CGCAACCCTCCGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
14354810 AAACGAGCGGGCGGGCAGGCACTACGCCGACCAAAGAGACAGGATGCGCAAGCCGTGGA-CGATA
66 AAACGAGCGAGCGGGCAGGCACTACGCCGGCCAGAGAGACAGGATACGCAAGCCGTGGATCGATA
*
14354874 -GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGACTTGT
131 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGT
*
14354938 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTAT
196 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * * *
14355003 TTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGGTTTTTA
261 TTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGGGTTTTG
* * *
14355068 GCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAACTAAAA
326 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* * * *
14355133 AATCAAAGTGTACAAGAGTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATTG
391 ACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
14355198 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCT-GAAGGTTTG
456 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCG-AGGTTTG
*
14355262 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGCACAC
520 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
* *
14355327 CCCCCTCCGGCCCCCCGAATCATTGGAACACCAATGCCGTCGGTCAGGTTCTCTGACGATGCTTC
584 -CCCC-CCGGCCCCCCG-ATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCT-ACGATGCTTC
* * * *
14355392 GGCGATGGTGCCCCGACGAAGAAAAATACGGTACCAGCACATACTCGAG-CCATGCATGTGCTGC
645 GGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA-GCATGTGCTGC
* *
14355456 TGCAACCGTTGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTAA-CCATGA
709 CGCAACCCTTGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTAACCCATGA
*
14355520 AACGAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCAGGTC
774 AACGAGCGTGCGGGCGCTCAGCCGGC-AGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTC
*
14355585 CCACTCTGTGTGCTGCCAATCCTGCTGCCAACCCTACTGC
838 CC-CTCTGCGTGCTG---AT-C-GCTG-C-A-CCTACTGC
* * ** *
14355625 CGTAACCCTCTGTTTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACG
1 CGCAACCCTCCGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * ** * * **
14355690 AAACGAGCAAGCGGGCGGGCGGGCACTATACCGGCCAGAGAGACGGGATACGTAAGTTGTGGATC
66 AAAC--G--AGCGAGCGGGCAGGCACTACGCCGGCCAGAGAGACAGGATACGCAAGCCGTGGATC
* *
14355755 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
127 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGC
* * * *
14355820 TTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCCTCGCAAGATGACTCGTTTT
192 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
*
14355885 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGG-AGGGAG
257 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGG-G
** * * * *
14355949 TTTTGGCAACAAACTTGGTAGACCTGATCCTTGTATTTTTGTTGGTATGCACAAAAACATTCGGC
321 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
*
14356014 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
386 TAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
14356079 AACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
451 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGG
*
14356144 TTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-CGCACATCATGTGCGC
516 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* *
14356208 ACACCCCTCCGACCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTAGCGATTCTT
581 ACACCCC-CCGGCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTA-CGATGCTT
* * ** *
14356273 CAGCGACGGTGCCCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGC
644 CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
*
14356338 CGCAACCCTCAATCCAGTCTGATCTTACACTGGTAATGAACTCCGTATGCTTAGACTGGGAATGA
709 CGCAACCCT---T---G---G-TC---CA---G---T---CT--G-AT-CTTAGACTAGGAATGA
* * * *
14356403 ACGCCGTATACCTAAGTTAACCCATGAAACAAGTGTGCGGGCGCTCAGCCGGACAGAGGGGCGGG
748 ACTCCGTATGCCTAAG-TAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGG-CAGAGGGGCGGG
* * * * *
14356468 ATGCGCAAGCCGGGGATCAACCAGATCCCTCTCTGCATGCTG-TCGGT-CA--TGCTGC
811 ATGCGCAAGCCGGGGATCGACCAGGTCCC-CTCTGCGTGCTGATCGCTGCACCTACTGC
* *
14356523 CACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
1 CGCAACCCTCCGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * *
14356588 AAACGAGCGAGTGGGCAGGCACTACGCCGGCTAGAGAGACAGGATAAGCAAGCCGTGGATCGATA
66 AAACGAGCGAGCGGGCAGGCACTACGCCGGCCAGAGAGACAGGATACGCAAGCCGTGGATCGATA
** * *
14356653 GGGTGGTAGGTGGGTTTAGGGTCATCTTCATATATT-TGCTTGCCAATGCCATTTTTATGGCTTG
131 GGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTACGTGCCAATGCCATTTTTATGGCTTG
*
14356717 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTTCTA
195 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* *
14356782 TTTTTCTTGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
260 TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGGGTTTT
* * * * *
14356847 GGCCCCAAAGTTGGCAAACGTGATCCTTGTATTTTTATTGGCATTCACAAAAAAATTCAGCTAAA
325 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
*
14356912 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
390 AACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
*
14356977 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGA-GAGATCTCGAGGTTT
455 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT-ATGAGTTCTCGAGGTTT
* * **
14357041 GATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACCTCATGTAAGCACA
519 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * * * *
14357106 CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTTGGTCAGATTCTCTGGCGATGCTCCGA
584 CCCCCCGG-CCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCT-ACGATGCTTCGG
* * *
14357171 CGGTGGTGCCCCGACGAAGAAAAATGCGGCACCACCACAT-CCTCGAGCCCAGCATGTGCTGCTG
647 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-CGAGCCCAGCATGTGCTGCCG
* * *
14357235 GAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
711 CAACCCTTGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAG
14357288 CCAACCGACA
Statistics
Matches: 2235, Mismatches: 226, Indels: 180
0.85 0.09 0.07
Matches are distributed among these distances:
865 1 0.00
866 70 0.03
867 3 0.00
868 8 0.00
869 30 0.01
870 4 0.00
871 1 0.00
873 2 0.00
875 4 0.00
876 1 0.00
877 1 0.00
878 47 0.02
879 2 0.00
880 18 0.01
881 416 0.19
882 120 0.05
883 96 0.04
884 45 0.02
885 31 0.01
886 401 0.18
887 20 0.01
888 1 0.00
889 40 0.02
890 1 0.00
891 2 0.00
892 2 0.00
893 3 0.00
894 540 0.24
895 134 0.06
896 1 0.00
898 69 0.03
901 2 0.00
902 1 0.00
904 4 0.00
905 1 0.00
906 2 0.00
907 2 0.00
908 29 0.01
909 3 0.00
910 76 0.03
911 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (868 bp):
CGCAACCCTCCGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
AAACGAGCGAGCGGGCAGGCACTACGCCGGCCAGAGAGACAGGATACGCAAGCCGTGGATCGATA
GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGT
AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
TTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGGGTTTTG
GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
ACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGA
TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
CCCCGGCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTACGATGCTTCGGCGAT
GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
CTTGGTCCAGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTAACCCATGAAACGAGC
GTGCGGGCGCTCAGCCGGCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCTCTGC
GTGCTGATCGCTGCACCTACTGC
Found at i:14356401 original size:26 final size:26
Alignment explanation
Indices: 14356361--14356411 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
14356351 CCAGTCTGAT
* *
14356361 CTTACACTGGTAATGAACTCCGTATG
1 CTTACACTGGGAATGAACGCCGTATG
*
14356387 CTTAGACTGGGAATGAACGCCGTAT
1 CTTACACTGGGAATGAACGCCGTAT
14356412 ACCTAAGTTA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTACACTGGGAATGAACGCCGTATG
Found at i:14358188 original size:715 final size:711
Alignment explanation
Indices: 14356525--14358696 Score: 3347
Period size: 715 Copynumber: 3.1 Consensus size: 711
14356515 CATGCTGCCA
*
14356525 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
1 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAA
* * * * **
14356590 ACGA----GCGAGTGGGCAGGCACTACGCCGGCTAGAGAGACAGGATAAGCAAGCCGTGGATCGA
66 ACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
** *
14356651 TAGGGTGGTAGGTGGGTTTAGGGTCATCTTCATATAT-T-TGCTTGCCAATGCCATTTTTATGGC
131 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATG--TGCCAATGCCATTTTTATGGC
* * *
14356714 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACCACTCGTTTT
194 TTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTT
* * * * *
14356779 CTATTTTTCTTGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
259 CTATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGT
* * * * *
14356844 TTTGGCCCCAAAGTTGGCAAACGTGATCCTTGTATTTTTATTGGCATTCACAAAAAAATTCAGCT
324 TTTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT
*
14356909 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
389 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
*
14356974 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCTCGAGGT
454 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCTTGAGGT
* * **
14357039 TTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACCTCATGTAAGCA
519 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* *
14357104 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTTGGTCAGATTCTCTGGCGATGCTCC
584 CACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCTGGCGATGCTCC
*
14357169 GACGGTGGTGCCCCGACGAAGAAAAATGCGGCACCACCACAT-CCTCGAGCCCAGCATGTGCTGC
648 GA-GGTGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC-CGAGCCCAGCATGTGCTGC
14357233 TG
711 -G
* *
14357235 GAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAA
1 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAA
* *
14357300 ACGAGCGGGC-AGGCGGGCGAGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
66 ACGAGCGGGCGA-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
14357364 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCT
130 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCT
* *
14357429 TGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACTCATTTTG
195 TGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTC
*
14357494 TATTTTTCACGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTT
260 TATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTT
* ** * *
14357559 TTGGCCCCAAACTTGGTATATGTGATCCTTGTATTTTTTTTGGTGTGCACAAAAAAAGTCAGCCA
325 TTGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
*
14357624 AAAACTCAAATTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
390 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
*
14357689 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCAGAGATCTTGAGGTT
455 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCTTGAGGTT
*
14357754 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGTACCCATCGCACATCATGTGCGCAC
520 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* *
14357819 ACCCCCCTGGCCCCTCCGATCGTCAGAACCCCAATGCCGCAGGTCAGGTTCTCTGGCGATGCTCC
585 ACCCCCC-GGCCCC-CCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCTGGCGATGCTCC
*
14357884 GATGGTGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGTC
648 GA-GGTGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-C
14357949 G
711 G
* * * *
14357950 CAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACAAA
1 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAA
* *
14358015 ACGAGCGGGCGAACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAA
66 ACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
* *
14358080 TAGGGTGGTAGGTGGGTTGAGGCACATCTTCATATTTCTATGTGCCAATACCATTTTTATGGCTT
131 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTT
* * *
14358145 GTAAATTCGTACAGTGGTCCCTTAGGCCTTCACCTGAAGTTTCATGGCAAGACGACTCATTTTCT
196 GTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCT
* *
14358210 ATTTTTCATGATTTTTAAAACTTTTTGAGGTTCGGGATTTTTTAAATTTTTTTTGGAAGGGGTTT
261 ATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTTT
* * * *
14358275 TCGTCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTAA
326 TGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
* *
14358340 AAACT-AGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAA
391 AAACTCA-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
14358404 TGGCTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTT
455 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCTTGAGGTT
*
14358469 TGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
520 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* **
14358534 ACCCCCCAGCACCCCCGATCGTCGGAACCCCAATGTTGCTGGTCAGGTTCTC---CGA-----CG
585 ACCCCCCGGC-CCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCTGGCGATGCTCCG
*
14358591 A--TGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
649 AGGTGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CG
* * * * *
14358653 TAACCCTTGGTCCGGTCTGATATTGGACTAGGAATGAACTCCGT
1 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
14358697 CAGCTTAGAC
Statistics
Matches: 1345, Mismatches: 103, Indels: 35
0.91 0.07 0.02
Matches are distributed among these distances:
703 95 0.07
706 3 0.00
710 66 0.05
711 3 0.00
713 1 0.00
714 511 0.38
715 660 0.49
716 6 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (711 bp):
CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACAAA
ACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTT
GTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCT
ATTTTTCATGATTTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTTT
TGGCCCCAAACTTGGTAAATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
AAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGAGATCTTGAGGTTT
GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
CCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCTGGCGATGCTCCGAG
GTGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCG
Found at i:14360041 original size:881 final size:863
Alignment explanation
Indices: 14357960--14360484 Score: 3371
Period size: 881 Copynumber: 2.9 Consensus size: 863
14357950 CAACCCTTGG
* *
14357960 TCTGGTCCGATCTTAGACTGGGAATGAAC-TCTGTATGCCTAAGCCAACCGACAAAACGAGCGGG
1 TCTGGTCTGATCTTAGACTGGGAATGAACTTC-GTATGCCTAAGCCAACCGACGAAACGAGC-GG
*
14358024 CGAACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGT
64 -G--CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * * *
14358089 AGGTGGGTTGAGGCACATCTTCATATTTCTATGTGCCAATACCATTTTTATGGCTTGTAAATTCG
126 AGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * * * *
14358154 TACAGTGGTCCCTTAGGCCTTCACCTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAT
191 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCAT
* * * *
14358219 GATTTTTAAAACTTTTTGA-GGTTCGGGATTTTTTAAATTTTTTTTGGAAGGGGTTTTCGTCCCA
256 GATTTTTGAAACTTTTT-ACGGTTC-GGATTTTTTAAAATTTTTTTGG-AGGGGTTTTGGCCCCA
** *
14358283 AACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACT-AG
318 AACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA-
* *
14358347 AAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACT
382 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
14358412 GGCGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGC
447 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TGAGGTTTGATGAGG
14358477 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC
511 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC
* * **
14358541 AGCACCCCCGATCGTCGGAACCCCAATGTTG-CTGGTCAGGTTCTC--CGA------CGATGGTG
576 GGC-CCCCCGATCATCGGAACCCCAATGCCGTC-GGTCAGGTTCTCTACGATCTTCGCGATGGTG
* * *
14358597 CCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTTG
639 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTTG
14358662 GTCCGGTCTGATATTGGACTAGGAATGAACTCCGTCAGCTTAGACTGGGAATGAACTCCGTATGC
704 GTCCGGTCTG--A-T---CT-----T--A----G--A-C-T--A---GGAATGAACTCCGTATGC
* * *
14358727 CTAAGTCAACCCATGAAATGAGCGTGGGGGCACTCAGCCGGCCAGAGGGACGGAATGCGTAAGCC
743 CTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGACGGAATGCGCAAGCC
** * * *
14358792 GAGGATCGGTCGGGTCCCCTTCTGCGTGCTACCGATCCTACTGCTGCAACCCTCCA
808 GAGGATCGACCAGGTCCCCTTCTGCGTGCTACCGACCCTACTGCCGCAACCCTCCA
* * * * **
14358848 TCTGGTCTAATCTTAGACTGGGAATAAACTCCGTAT--CGAAGCCAATTGACGAAACGAGCGGGC
1 TCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * * *
14358911 GGGCAGGCACTACGCCGACCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
66 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
14358976 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGACTTGTAAATTCATACAA
131 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
14359041 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTT
196 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTT
*
14359106 TTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGCAAGGGGTTTTGGCCCCAAACTTG
261 TTGAAACTTTTTACGGTTCG-GATTTTTTAAAATTTTTTTG-GAGGGGTTTTGGCCCCAAACTTG
* * *
14359171 GTAGACATGATCCCTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAAATCAAAGTGTA
324 GTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
* * *
14359236 CAAGAGTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATTGCTACTGGCAGCA
389 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
14359301 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGAAGGTTTGATGAGGGATAGGG
454 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTG-AGGTTTGATGAGGGATAGGG
14359366 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCC
518 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCC
* *
14359431 CCGAATCATTGGAACACCAATGCCGTCGGTCAGGTTCTCTGACGATGCTTCGGCGATGGTGCCCC
582 CCG-ATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCT-ACGAT-CTTC-GCGATGGTGCCCC
* * * ** *
14359496 GACGAAGAAAAATGCGGTACCAACACATGCTCGAGCCTTGCATGTGCTGCTGCAACCGTTGGTCC
643 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTTGGTCC
*
14359561 AGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGT-AA-CCATGAAACGAGCGTGCGGG
708 GGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGG
* * * *
14359624 CGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCAGGTCCCAC-TCTGCGTGC
773 CACTCAGCCGGCCAGAGGGACGGAATGCGCAAGCCGAGGATCGACCAGGTCCC-CTTCTGCGTGC
* **
14359688 TGCCAATCCTGCTGCCAACCCTACTGCCGTAACCCTCTG
837 T----A--C--C-G---ACCCTACTGCCGCAACCCTCCA
* *
14359727 TTTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCAGGC
1 TCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * **
14359792 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATACGTAAGTTGTGGATCGATAGGGTGGTAGGTG
66 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* *
14359857 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
131 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * *
14359922 TGGACCTTTAAGCCTTCACGTGAAGTTTCATCGCAAGATGACTCGTTTTCTATTTTTCATGATTT
196 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTT
* **
14359987 TTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAGGGAGTTTTGGCAACAAACTTG
261 TTGAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTTTGGAGGG-GTTTTGGCCCCAAACTTG
* * * * *
14360052 GTAGACCTGATCCTTGTATTTTTGTTGGCATGCATAAAAACATTCAGCTAAAAACTCGAAGTGTA
324 GTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
* *
14360117 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAACGGCTACTGGCAGCA
389 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
14360182 AACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGG
454 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-GAGGTTTGATGAGGGATAGGG
* *
14360247 GGCCAATATAAGGGCCAAGTACCAGCACCCA-CGCACATCATGTGCGCACACCCCTCCGACCCCC
518 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
*
14360311 CGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTAGCGATTCTTCAGCGATGGTGCCCCGG
583 CGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTA-CGA-TCTTC-GCGATGGTGCCCCGA
* * *
14360376 TGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG-TCGCAACCCTTGGTCTG
645 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCT-GCAACCCTTGGTCCG
* * * *
14360440 GTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACC
709 GTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACC
14360485 GACAAAACGA
Statistics
Matches: 1460, Mismatches: 133, Indels: 96
0.86 0.08 0.06
Matches are distributed among these distances:
867 73 0.05
868 3 0.00
869 24 0.02
871 1 0.00
872 1 0.00
873 1 0.00
874 1 0.00
875 2 0.00
876 2 0.00
877 2 0.00
878 144 0.10
879 66 0.05
880 24 0.02
881 471 0.32
882 467 0.32
883 7 0.00
884 38 0.03
885 3 0.00
886 19 0.01
887 3 0.00
888 30 0.02
889 3 0.00
892 1 0.00
893 1 0.00
895 73 0.05
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (863 bp):
TCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTT
TTGAAACTTTTTACGGTTCGGATTTTTTAAAATTTTTTTGGAGGGGTTTTGGCCCCAAACTTGGT
AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGAGGTTTGATGAGGGATAGGGGGC
CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
TCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTACGATCTTCGCGATGGTGCCCCGACGAAGA
AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTTGGTCCGGTCTGAT
CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGC
CGGCCAGAGGGACGGAATGCGCAAGCCGAGGATCGACCAGGTCCCCTTCTGCGTGCTACCGACCC
TACTGCCGCAACCCTCCA
Found at i:14362535 original size:885 final size:872
Alignment explanation
Indices: 14360439--14363843 Score: 4194
Period size: 883 Copynumber: 3.8 Consensus size: 872
14360429 CCCTTGGTCT
* * * * *
14360439 GGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACAAAACGAGCGGGCGAA
1 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-AGCGAG
* * * * * *
14360504 CGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGAATCAATAGGGTGGTAGGT
65 CGGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * * *
14360569 GGGTTGAGGCACATCTTCATATTTCTATGTGCCAATACCATTTTTATGGCTTGTAAATTCGTACA
130 GGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * * *
14360634 GTGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATT
195 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCATGATT
* ** * * *
14360699 TTTAAAACTTTTTGTGGTTCGGGATTTTTTAAATTTTTTTTGGAAGGGGTTTTCGTC-CCAAACT
260 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTTTT-GGCAACAAACT
** * *
14360763 TGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACT-AGAAGT
324 TGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA-AAGT
* *
14360827 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCG
388 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
14360892 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTGAGGTTTGATGAGCGATA
453 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TGAGGTTTGATGAGGGATA
*
14360957 GGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC-AGC
517 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGA-C
* **
14361021 ACCCCCGATCGTCGGAACCCCAATGTTG-CTGGTCAGGTTCTC--CGA--------CGATGGTGC
581 -CCCCCGATCATCGGAACCCCAATGCCGTC-GGTCAGGTTCTCTACGATGCTTCGGCGATGGTGC
* *
14361075 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTTGG
644 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCGTTGG
* *
14361140 TCCGGTCCGATCTTAGACTAGGAATGAACTCCATCAGCTTAGACTGGGAATGAACTCCGTATGCC
709 TCCAGTCTGATCTTAGACTAGGAATGAA---C-T---C-----C---------A-----TATGCC
** * * * * * *
14361205 TAAGTCAACCCACAAAATGAGCGTGCGGGCACTCAGCCGGCCAGAGGGACGGAATGCGTAAACCG
748 TAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGG-CAGAGGGGCGGGATGCGCAAGCCG
* * * * * * *
14361270 GGGATCG-GTCGGGTCCCCTTCTACGTGCTACCGATCCTACTGCTGCAA-CC-CT-CCAT-C-C
812 GGGATCGACT-AGGTCCCC-TCTGCGTGCTGCCGATCCTGCTGC-ACAACCCTCTGCCGTACTC
* * * *
14361328 GGTCTAATCTTAGACTGGGAATAAACTCCGTAT--CGAAGCCAACTGACGAAACGAGC-G-G-GC
1 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGAGC
*
14361388 GGGCAGGCACTACGCCGACCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
66 GGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* *
14361453 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGACTTTTAAATTCATACAA
131 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
14361518 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTT
196 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCATGATTT
* **
14361583 TTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCCCCAAACTTG
261 TTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCAACAAACTTG
* * * *
14361648 GTAGACATGATCCCTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAAATCAAAGTGTA
326 GTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
* * *
14361713 CAAGAGTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATTGCTACTGGCAGCA
391 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
14361778 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGAAGGTTTGATGAGGGATAGGG
456 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTG-AGGTTTGATGAGGGATAGGG
* *
14361843 GGCCAATATAAGGCCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCC
520 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGACCCC
* *
14361908 CCGAATCATTGGAACACCAATGCCGTCGGTCAGGTTCTCTGACGATGCTTCGGCGATGGTGCCCC
584 CCG-ATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCT-ACGATGCTTCGGCGATGGTGCCCC
* * * ** *
14361973 GACGAAGAAAAATGCGGTACCAACACATGCTCGAGCCTTGCATGTGCTGCTGCAACCGTTGGTCC
647 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCGTTGGTCC
14362038 AGTCTGATCTTAGACTAGGAATGAACTCCATATGCCTAAGT-AA-CCATGAAACGAGCGTGCGGG
712 AGTCTGATCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGG
*
14362101 CGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGCCGAGGATCGACTAGGTCCCACTCTGCGTGCT
777 CGCTCAGCCGGC-AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTAGGTCCC-CTCTGCGTGCT
*
14362166 GCCAATCCTGCTGC-CAACCCTACTGCCGTAACCCTC
840 GCCGATCCTGCTGCACAACCCT-CTGCCGT-A--CTC
*
14362202 TGTTTAGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCAG
1 -G----GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA-
* * * * * **
14362267 GCGGGCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATACGTAAGTTGTGGATCGATAGGGTGG
60 GCGAGCGGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGTGGATCGATAGGGTGG
* * *
14362332 TAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
125 TAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
14362397 ATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATCGCAAGATGACTCGTTTTCTATTTTTCA
190 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCA
* *
14362462 TGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGG-AGGGAGTTTTGGCAAC
255 TGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGG-GTTTTGGCAAC
* * * * *
14362526 AAACTTGGTAGACCTGATCCTTGTATTTTTGTTGTCCTGCACAAAAACATTCAGCTAAAAACTCG
319 AAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
*
14362591 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACT
384 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
14362656 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
449 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-GAGGTTTGATGAGG
* *
14362721 GACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-CGCACATCATGTGCGCACACCCCTCC
513 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC
* *
14362785 GACCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTAGCGATTCTTCAGCGATGGT
578 GACCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTA-CGATGCTTCGGCGATGGT
** *
14362850 GCCCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
642 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG-------C
* * *
14362915 AATCCAGTCTGATCTTACACTGGTAATGAACTCCGTATGCTTAGACTGGGAATGAACGT-CGTAT
700 AA-CC-GT-TGGTC---CA---G---T---CT--G-AT-CTTAGACTAGGAATGAAC-TCCATAT
* * *
14362979 ACCTAAGTCAACCCATGAAACAAGTGTGCGGGCGCTCAGCCGGACAGAGGGGCGGGATGCGCAAG
745 GCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGG-CAGAGGGGCGGGATGCGCAAG
* * * * * *
14363044 CCGGGGATCAAC-CGGATCCCTCTCTGCATGCTGTCGGTCATGCTGCCACAACCCTC-G--GT-C
809 CCGGGGATCGACTAGG-TCCC-CTCTGCGTGCTGCCGATCCTGCTG-CACAACCCTCTGCCGTAC
14363104 -C
871 TC
*
14363105 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-C--CGAGT
1 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGAGC
* * *
14363167 GGGCAGGCACTACGCCGGCCAGAGAGACAGGATAAGCAAGCCGTGGATCGATAGGGTGGTAGGTG
66 GGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTG
** * *
14363232 GGTTTAGGGTCATCTTCATATATT-TGCTTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
131 GGTTTAGGCACATCTTCATAT-TTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
*
14363296 ATGGTCCCTTAAGCCTTCACATGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCATGATT
195 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCATGATT
*
14363361 TTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG-AGGGAGTTTTGGCAACAAACT
260 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGG-GTTTTGGCAACAAACT
* *
14363425 TGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCATCTAAAAACTCGAAGTG
324 TGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTG
* *
14363490 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGTAG
389 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
14363555 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAG
454 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG-TTCTGAGGTTTGATGAGGGATAG
* *
14363620 GGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGACCC
518 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCC
* * * * *** * *
14363685 CTCCAATCGTCGGAACCCCAATGCTGTCGGTCAAGTTCTTCGGTGATGCTCCGACGATGGTGCCC
583 C-CCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTC-TCTACGATGCTTCGGCGATGGTGCCC
** * * * * * *
14363750 CGATAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCACGTGTTGTCGCAACCCTCGGTC
646 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCGTTGGTC
** ** *
14363815 TGGTCCAATCTTAGACTGGGAATGAACTC
711 CAGTCTGATCTTAGACTAGGAATGAACTC
14363844 TGTATGCTTA
Statistics
Matches: 2231, Mismatches: 202, Indels: 185
0.85 0.08 0.07
Matches are distributed among these distances:
865 3 0.00
866 3 0.00
867 78 0.03
868 6 0.00
869 15 0.01
870 18 0.01
871 2 0.00
873 1 0.00
874 3 0.00
875 1 0.00
877 1 0.00
879 29 0.01
880 1 0.00
881 22 0.01
882 102 0.05
883 485 0.22
884 62 0.03
885 449 0.20
886 4 0.00
887 24 0.01
888 3 0.00
889 35 0.02
890 2 0.00
891 3 0.00
892 5 0.00
894 455 0.20
895 129 0.06
896 95 0.04
897 3 0.00
898 55 0.02
901 1 0.00
902 1 0.00
903 1 0.00
904 3 0.00
906 1 0.00
907 2 0.00
908 30 0.01
909 5 0.00
910 83 0.04
911 3 0.00
912 7 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (872 bp):
GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGCGAGC
GGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACTCGTTTTCTATTTTTCATGATTT
TTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCAACAAACTTG
GTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTA
CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCC
GATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTACGATGCTTCGGCGATGGTGCCCCGACG
AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCGTTGGTCCAGTC
TGATCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCT
CAGCCGGCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACTAGGTCCCCTCTGCGTGCTGCCGAT
CCTGCTGCACAACCCTCTGCCGTACTC
Found at i:14363413 original size:894 final size:890
Alignment explanation
Indices: 14362046--14363912 Score: 2665
Period size: 894 Copynumber: 2.1 Consensus size: 890
14362036 CCAGTCTGAT
*
14362046 CTTAGACTAGGAATGAACTCCATATGCCTAAGT-AA-CCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
* * *
14362109 CGGCTAGAGGGGCGGGATGCGCAAGCCGAGGATCGACTAGGTCCCACTCTGCGTGCTGCCAATCC
66 CGGC-AGAGGGGCGGGATGCGCAAGCCGGGGATCGAC-CGGTCCC-CTCTGCGTGCTGCCGATCC
*
14362174 TGCTG-CCAACCCTACTGCCGTAACCCTCTGTTTAGTCTGATCTTAGACTGGGAATGAACTTCGT
128 TGCTGCCCAACCCT-C-G--GT----C-C-G----GTCTGATCTTAGACTGGGAATGAACTCCGT
* * * *
14362238 ATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCACTACGCCGGCCAAAGAGACGG
179 ATGCCTAAGCCAACCGACGAAACGAGC--GCGAGCGGGCAGGCACTACGCCGACCAAAGAGACAG
* ** * *
14362303 GATACGTAAGTTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATG
242 GATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTG
*
14362368 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCA
307 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* *
14362433 TCGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTA
372 TCGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * *
14362498 AAATTTTTTCGG-AGGGAGTTTTGGCAACAAACTTGGTAGACCTGATCCTTGTATTTTTGTTGTC
437 AAATTTTTTTGGAAGGG-GTTTTGGCAACAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGC
* *
14362562 CTGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
501 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
*
14362627 TCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
566 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* *
14362692 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
631 GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
*
14362757 CA-CGCACATCATGTGCGCACACCCCTCCGACCCCCCGATCATCGGAACCCCAATGCCGTCGGTC
696 CATCGCACATCATGTGCGCACACCCCCCCGACCCCCCGATCATCGGAACCCCAATGCCGTCGGTC
* ** *
14362821 AGGTTCTCTAGCGATTCTTCAGCGATGGTGCCCCGGTGAAGAAAAATGCGACACCAGCACATGCC
761 AGGTTCTCT-GCGATGC-TCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCC
* *
14362886 CGAGCCCAGCATGTGCTGCCGCAACCCTCAATCCAGTCTGATCTTACACTGGTAATGAACTCCGT
824 CGAGCCCAGCATGTGCTGCCGCAACCCTCAATCCGGTCCGATCTTACACTGG-AATGAACTCCGT
14362951 ATG
888 ATG
* * * *
14362954 CTTAGACTGGGAATGAACGT-CGTATACCTAAGTCAACCCATGAAACAAGTGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAAC-TCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAG
* * * *
14363018 CCGGACAGAGGGGCGGGATGCGCAAGCCGGGGATCAACCGGATCCCTCTCTGCATGCTGTCGGTC
65 CCGG-CAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG-TCCC-CTCTGCGTGCTGCCGATC
*
14363083 ATGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
127 CTGCTGCC-CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14363148 ACCGACGAAACGA-C-CGAGTGGGCAGGCACTACGCCGGCCAGAGAGACAGGATAAGCAAGCCGT
191 ACCGACGAAACGAGCGCGAGCGGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGT
**
14363211 GGATCGATAGGGTGGTAGGTGGGTTTAGGGTCATCTTCATATATT-TGCTTGCCAATGCCATTTT
256 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTGCTTGCCAATGCCATTTT
*
14363275 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATCGCAAGACGACT
320 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACT
*
14363340 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGG-
385 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGA
14363404 AGGGAGTTTTGGCAACAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
450 AGGG-GTTTTGGCAACAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
14363469 TTCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGA
514 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14363534 CACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTT
579 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14363599 TTGAGGTTTGATGAGGGATAGGGGGCCAATAAAAGGGCCAAGTACCAGCACCCATCACACATCAT
644 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
14363664 GTGCGCACACCCCCCCGACCCCTCCAATCGTCGGAACCCCAATGCTGTCGGTCAAGTTCTTCGGT
709 GTGCGCACACCCCCCCGACCCC-CCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTC-TCTGC
* ** * *
14363729 GATGCTCCGACGATGGTGCCCCGATAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCAC
772 GATGCTCAG-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * ** * * * *
14363794 GTGTTGTCGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCTGTATG
836 GTGCTGCCGCAACCCTCAATCCGGTCCGATCTTACACT-GGAATGAACTCCGTATG
* * *
14363850 CTTAGGCTGGGAATGAACTCCATATGCCTAAGTCAACCCATGGAATGAGCGTGCGGGCGCTCA
1 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCA
14363913 ACCGCCCATC
Statistics
Matches: 868, Mismatches: 77, Indels: 40
0.88 0.08 0.04
Matches are distributed among these distances:
894 458 0.53
895 36 0.04
896 184 0.21
897 5 0.01
898 54 0.06
902 1 0.00
903 1 0.00
904 1 0.00
908 30 0.03
909 5 0.01
910 83 0.10
911 3 0.00
912 7 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
CGGCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGTCCCCTCTGCGTGCTGCCGATCCTGC
TGCCCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
CGAAACGAGCGCGAGCGGGCAGGCACTACGCCGACCAAAGAGACAGGATACGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATCGCAAGACGACTCGTTTT
CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGGGT
TTTGGCAACAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
CACCCCCCCGACCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGCGATGCTCAG
CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
AACCCTCAATCCGGTCCGATCTTACACTGGAATGAACTCCGTATG
Found at i:14363875 original size:26 final size:26
Alignment explanation
Indices: 14363824--14363876 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14363814 CTGGTCCAAT
**
14363824 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14363850 CTTAGGCTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
14363876 C
1 C
14363877 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14365428 original size:26 final size:26
Alignment explanation
Indices: 14365392--14365444 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14365382 CCAATCCAAT
* *
14365392 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
14365418 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
14365444 C
1 C
14365445 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:14366214 original size:26 final size:26
Alignment explanation
Indices: 14366185--14366237 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14366175 CTGGTCCGAT
14366185 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* * *
14366211 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14366237 C
1 C
14366238 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14368012 original size:26 final size:26
Alignment explanation
Indices: 14367976--14368028 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14367966 CCAGTCCGAT
*
14367976 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14368002 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14368028 C
1 C
14368029 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14369075 original size:906 final size:902
Alignment explanation
Indices: 14366008--14383229 Score: 20463
Period size: 906 Copynumber: 19.2 Consensus size: 902
14365998 AACCTGTAAA
* * * *
14366008 ACCCATGGCACATCATGTGCGCACACCCCCATCGGCCCCCTCGATCGTCGGAACCCCAATGCCGT
1 ACCCATCGCACATCATGTGCGCACACCCCC-CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGC
* ** ** *
14366073 CGGTCAGGTTCTCTGGTGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCTGCACCAGCAC
65 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
** * * *
14366138 ATGCCCGAGAACAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAAC
130 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* *
14366203 TCCGTATGCTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
195 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * * * ** ** *
14366268 GGCTCAGCCGGCCAAAAGGGTGGGATGCACGAGCCGGGGATCGATCGGGT-CTGTCTCTACGTGC
260 CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCT-TCTGCGTGC
* * * * ** * * * * * *
14366332 TGTC-AGTCCTACTACCACAACCCTCAGCCCGGTCTGATCCTT-GACTAGGAATCAATTCCATAT
324 TGCCGA-TCCTGCTGCCGCAACCCTTGGTCTGGTCTGAT-CTTAGACTGGGAATGAACTCCGTAT
* * * * * *
14366395 GCCAAAGCCAACCGACGAAATGAG-TG-GGCGGGCGGGTGGGCACTACGCCAGCCAGAGACACGG
387 GCCTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGG
* * * * *
14366458 GATGCGTAAGCCGTTGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCATCATATTTCTACATG
452 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
14366523 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
517 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * ** * *
14366588 TGGCAAGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACAGTTTGGGATTTTTTA
582 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * * *
14366653 AAATTTTTTCGAAAGGAGTTTTGGCCCCAAACATGGTAGACATGATCCCTGT-TTTTTTGTTGGC
647 AAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTT-TTGGC
* * * * * * *
14366717 ATGCAAAAAAAAATTCAGCTAAAATCTCGAAGTCTGCAAGATTTTGCGACCTTTTGAAAAAGGTG
711 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
14366782 TCCCCATTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
776 TCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * *
14366847 GAGGGTGTGAGTTCTCGAGGTTTGAT--GGGATAGGGGGCCAATATAAAGCCCAAGTACCAGC
840 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * ** *
14366908 ACCAATCGCACATCATGTGCGCGCACCCCCCCGGCACCCCCGATCACCGGAACCCCAATGCCGTC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
** ** * *
14366973 GGTCAGGTTCTCCGACGATTATCCGGTGATGGTGCCCCGACGAAGAAAAATACGGTACCAGCACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * *
14367038 TGCCCGAGCCCAGCTTATGCTGCCACAACCCTCGGCCCGATCCGATCTTAGACTGGGAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
** * * * *
14367103 CTATACGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACACACGAAACGAGCGTGCAGGC
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * * *
14367168 GCTCAGCCGGCCAGAGGGACGGGATGCACGAGCAGGGGATCGGTCAGGT-CCGTCTCTGCGTGCT
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCT-TCTGCGTGCT
** ** ** **** * * *
14367232 ATCGATTTTGCTATCGCAACCCTCAACCCGGTCTGATCCTT-GACTAGGAATGAACTCCATATGC
325 GCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGAT-CTTAGACTGGGAATGAACTCCGTATGC
* * * * * * *
14367296 CTAAGCCAACTGACGAAATGAGCGGGCGGGCGGGCGGGCGGGCAGTACGCGGGCTAGAGAGACAG
389 CTAAGCCAACCGACGAAACGAGC-AGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGG
* **
14367361 GATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTG
452 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
*
14367426 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCA
517 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
** *
14367491 TGGCAAGAATACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GGATTTTTTA
582 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * * *
14367555 AAACTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGCTAGACGTGATCCTTGTATTTTTTTTGGCA
647 AAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCA
*
14367620 TGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTTT-TGACCATTTG-AAAAAGTGT
712 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
14367683 CCCCATTTTAGACACTTTAATTGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
777 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* *
14367748 GGGTGTGAGTTCTTGAGGTTTCATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
842 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
14367809 ACCCATCGCACATCATGTGCGCACA---------CCCCCCCGATCG-CTGGAACCCCAATGCCGC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGC
* * * * * *
14367864 CGGTCGGGTTCTCCGGCGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCAA
65 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * *
14367929 ATGCCCGAGCCTAGCATGTGCTACTGCAACCCTTGGTCC-AGTCCGATCTTAGACTGGGAATGAA
130 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAA
* *
14367993 CTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
194 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * * * * *
14368058 GCGCTTAGTCGGCCAGAGGGGTGGGATGCGTAAGTCGGGGATCGACTGGGACCCGC-TCTGCATG
259 GCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCC-CTTCTGCGTG
* * * *
14368122 CTGCCGATCCT-CTTGCCGCAACCCTCGGTTTGGTCTGATCATAGACTGAGAATGAACTCCGTAT
323 CTGCCGATCCTGC-TGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * *
14368186 GCCCAAGCCAATCGACGGAACGAGCTAGCTGGCGGGCAGGCGGGCACTACGCCAGCCAGAGAGAC
387 GCCTAAGCCAACCGACGAAACGAGC-AGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * *
14368251 GGGATGCGCAAGCCGTGGATCGATAGAGTTGG-AGGTGGGTTTAGGCACATCTTCATAGTTCTAC
450 GGGATGCGCAAGCCGTGGATCGATAG-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * *
14368315 GTGCCAATGCCATTTTTATGGCTTGTCAATTCATACAAAGGTCCCTTAAGCCTTCACGTGAAGTT
514 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * ** *
14368380 TCGTGGCAAGACGACTCGTTTTCTATTTGTCACGATTTTCCAAACTTTTTACGGATCGGGATTTT
579 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
** * * * *
14368445 GGAAAATTTTTTTGAAAAGAGTTTTCGCCCCAAACTTGGTAGACGTGATCCTTGTAATTTTGTTG
644 TTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTG
*
14368510 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAG
709 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
14368575 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
774 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
14368640 A-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
839 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * ** * * **
14368703 ACCCATTGCACATCAAGTGCGCACACCCCCCCCCCGACCCCCCCGATCGTCAAAAACCTAATGGA
1 ACCCATCGCACATCATGTGCGCACA---CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
* * *
14368768 GTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGG
63 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGC
* * *
14368833 AAATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCTGATCATAGACTGGGAATGA
128 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGA
* *
14368898 ACTCCGTATGCTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGTAACGAGCGTGCG
193 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * * * **
14368963 AGCACTCAGTCGGCTAGAAGGGCAGGATACGCAAGCCGGGGATCGGCCGGGTCCCCTTCTATGTG
258 GGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTG
** * ** * * ** * *
14369028 CTATCGATCCTACTGCCATAACCCTTGATCCGGTCCAATCTTAGACTGGCAAGGAACTCCGTATG
323 CTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
14369093 CCTAAGCCAACTGACGAAACGAGCGGACAGGCGGGGGGGCAGGCACTACGCCGGCTAGAAAGACG
388 CCTAAGCCAACCGACGAAACGAGCAG-C-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* * * *
14369158 GGATGCGTAAGCCATGGATCGATAGGTTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCAT
451 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
*
14369223 GCCAATGCCATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
516 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* ** *
14369288 AAGGCAAGACGACTCGTTTTCTATTTTTTCATGATTTTCAAAACTTTTTACGGTTCAGGATTTTT
581 ATGGCAAGACGACTCGTTTTCTA-TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
** * *** * *
14369353 TAAACCTTTTTCGCTTGGAGTCTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAATTTTTTTGG
645 TAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* * * *
14369418 CATGCACAAAAAATTTCAGCTAACAAGTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGT
710 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
14369483 GTCCTCATTTCTA-ACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
775 GTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* * * *
14369547 AGGGGGCGTGAGTTCTTGAGGTTTCATGAGGGATAGGGGTCCAATATAAGGGCCAAGTACCAGC
839 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
14369611 ACCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * * *
14369675 GGTTAGGTTCTCCGACGGTGCTCTGGCGATGGTGCCCCGTC-AGAGAAAAATGCGGCACCAGCAC
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGA-AGAAAAATGCGGCACCAGCAC
* * *
14369739 ATGCCTGAGCCTAGCATGTGCTGCCACAACCCTCGGTCC-AGTCCGATCTTAGACTGGGAATGAA
130 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAA
* * ** *
14369803 CTTCGTGTGCTTAGACTATGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGG
194 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * *
14369868 GCTCTCAG-CTGGGCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCTTCTGTC-T
259 GCGCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTG-CGT
* * * * * ** * *
14369931 GCTACCGATCCTGCTTCCACAACACTTGGTTTGGTCCAATCTTAGACGGGGAATGAACTCCATAT
322 GCTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* *
14369996 GCC-AAGCCAACCGACGAAACGAGCGGGCAGGCGAACGG-GTAGGCGGGCACTACGCTGGCCAGA
387 GCCTAAGCCAACCGACGAAACGAGC-AGC-GGCG---GGCG--GGCGGGCACTACGCCGGCCAGA
*
14370059 GAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
445 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT
* * *
14370124 CTACGTGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
510 CTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
14370189 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACT-ATTTTTGAAACTTTTTACGGTTCGGG
575 AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA-TGATTTTTGAAACTTTTTACGGTTCGGG
* * * * *
14370253 ATTTTTTATAATTTTTTCG-AAGGGGTTTTGGGCCCAAACTTGGTAGATGTGATCCTTGTATTTT
639 ATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
14370317 TTTTGGCATGCACAAAAAAATCCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAA
704 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * *
14370382 AAAAGTGTCCCCATTTCAGACACTTTGATTGCTACTGGTAGCAAACCTGTACAATCTCAAATGCT
769 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
14370447 CTTTAAGGGGCTGTCAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTAC
834 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
14370512 CAGC
899 CAGC
* * * * * * *
14370516 ACCCATCGCACACCATGTACGCACACCCCCCCGGCCTCCCCGATCGCCGAAACCCCAATGTCGTC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * * *
14370581 GGTCAGGTTCTTCGGCGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * * ** *
14370646 TGCCCGAGCCCAGCATGTGCTGCTGCAACCCTTGGTCTGGTTTGATCTTAAACTGGGAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* * * * *
14370711 CCATATGCTCAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGACCGTGCAGGT
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * *
14370776 GCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACTGGGTCCCCCTCTGCATGCTG
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTGCTG
* * * * *
14370841 TCGATCCTACTGCCGAAACCCTCGGTCTGGT-TGGATCTTAGACTGGGAATGAAGTCCGTATGCC
326 CCGATCCTGCTGCCGCAACCCTTGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * * *
14370905 TAAGCCAACCGATGAAATGAG-AG-GGCGGGCGGGCCGACACTACGCCGGCCAGAGGGAC-GAAG
390 TAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * *
14370967 GCGCAAGCCGTGGATCGATAGGGTGGTATGTGGGTTTAGGCACACCTTCATATTTTTGCATGCCA
455 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* *
14371032 ATGCCATTTTTATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGG
520 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * ** * * **
14371097 CAAGACGACTCATTTTTTATTTTTCACGATTTTCAAAACTTTTTGCGGTTTGATATTTTTTAAAA
585 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * * *
14371162 TTTTCTCGGAAGGAGTTTTGGCCCCAAACTTTGTAGATGTGATCCTTGTATTTTTTTTGGCATGC
650 TTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
*
14371227 ACAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAG-GTCC
715 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCC
*
14371291 CCATTTCAGACACCTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
779 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
14371356 GTGTGAGTTCTTGAGGTTTGATGA-GGATTGGGGGCCAATATACA-GGCTAAGTACCAGC
844 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA-AGGGCCAAGTACCAGC
* * * ** * *
14371414 ACCCATCGCACATCATGTACACACA-CCCCCCGGCCCCCCCAATCACCGGAACCCTAATGCTGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * ** * *
14371478 GGTCAGGTTCTCCGGCGATGCTCC-AGTGATGGTGCCCCGGTGAAGAAAAATGTGGCACCATCAC
66 GGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * * * * * *
14371542 ATGCCTGAGCCCAGGATGTGCTGCCGTAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAAC
130 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* * * *
14371607 TTCGTATGCTTAGAATGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCATGCGGG
195 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * * * *
14371672 CACTCAGCCGACCAGAGGGGTGGGATACGTAAGTCGGGGATCGGGCGGGTACCCC-TCTGCGTGC
260 CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT-CCCCTTCTGCGTGC
* * * ** * **
14371736 TACTGATCCTGCTACCATAACCCTCT-GTCTGGTCTGATCTGAGACTGGGAATGAACTTTGTATG
324 TGCCGATCCTGCTGCCGCAACCCT-TGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* ** * * * *
14371800 CCCAAGCCAACCGACGAAACGAG--TTGGCTGGCGGGCGGGCACTATGCCAGCCAGAAAGACGGG
388 CCTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* *
14371863 ATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGT
453 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* * *
14371928 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCATTCACGTCAAGTTTCAT
518 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * *
14371993 GGCAAGATGACTCGTTTTCTATTTTTCACGAATTTTTGAAACCTTTTACGGTTTGGG-TTTTTTA
583 GGCAAGACGACTCGTTTTCTATTTTTCATG-ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTA
* * * ** * *
14372057 AAA-ATTTTTGGAAGGAGTTTTGGCCACAAACTTGGTAGACACGATCCTTGTATTTTTGTTAGCA
647 AAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCA
* *
14372121 TGCCCAAAAAAATTCAGCTAAAAACTCGAAGTGTTCAAGATTTTGTGACCATTTGAAAAAAGTGT
712 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
14372186 CCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATTTCAAATGCTCTTTAAGC
777 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* * **
14372251 GGGTGTGAGTTCTCAAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCCAAAAACCAGC
842 GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
14372312 ACCCATCGCACATCATGTGCGCACA-CCCCCCGG--CCCCC---C-T---------AATGCCGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * *
14372361 AGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * *
14372426 TGCCCAAGCCCAGCATTTGCTGCTGCAA-CC-C--T-CG----G----T---CT----A-G---T
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* *
14372467 CCG-AT-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGC
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * *
14372530 GCTCAGTCGGCCAGAGTGGCGGGATGCGCAAGCCAGGGATAGACCGAGTCCCCCTCTGCGTGCTA
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTGCTG
* * * * * * * *
14372595 CCGATCCTGCTACTGGAAGCCTCGGTCCGGTCTGATGTTAGACTGGGAATGAACTCCGTATGCTT
326 CCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * * * * * **
14372660 AAGCTAACCGATGAAATGAGCGGGTGGGCGGGTGGGTGGGCTGGCACTACGTCGATCAGAGAGAC
391 AAGCCAACCGACGAAACGAGC-----AGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * *
14372725 GGGATGTGCAAGCCGTGGATCGATAGGGTTGTAGGTGGCTTTAGGCACATCTTCATATTTCTCCA
450 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* *
14372790 TGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTT
515 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *
14372855 CATGGCAGGACGACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTTGGGATTTTT
580 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* *
14372920 T-AAACTTTTTTCAGAA-G-GTTGTTAGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTT
645 TAAAATTTTTTTGA-AAGGAGTT-TT-GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTT
* *
14372982 TGGCATGCACAAAAAAATTCAGCTAAAAAATCCAAGTGTACAAGATTTTGTGACCATTTGAAAAA
707 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * * *
14373047 AGTGTCCCTATTTCAAACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTT
772 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
*
14373112 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
837 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
14373177 C
902 C
* * * * *
14373178 ACCCATCACACATCATGTGCACACACCCCCTCGG-CCCCCCGATC-ACTGGAACCCCAATGCCGT
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGC
* ** **
14373241 CGGTCAGGTTCTCCGACGATGCTTCGGTGATGGTGCCCCGACGAAGAAAAATGTTGCACCAGCAC
65 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCAC
* * *
14373306 ATGCCCGAGCCTAGCATATGCTGCTGCAA-CC-C--T-CG----G----T---CT--G---G---
130 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* * * * *
14373347 TCCG-AT-CTTAGACTGGTAATGAACTTCATATGCCTAAGTCAACCCATGAAACCAGCGTGCGGG
195 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * *
14373410 CGCTCAGTCGACCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCTGGGTTCCCC-ACTGCTTGC
260 CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGG-TCCCCTTCTGCGTGC
* * * *** * * *
14373474 TTCTGATCCTACTATGGCAACCGTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGC
324 TGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
14373539 CTAAGCCAATCGAC--AA--A--A----CGAGCGAGCGGGCATTACGCCGACCAGAGAGACGGGA
389 CTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
* *
14373594 TGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCC
454 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC
* * *
14373659 ACTACCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATG
519 AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
* * *
14373724 GCAAGATGACTCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTT-TGGATTTTTTAAA
584 GCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAA
* * * *
14373788 ATTTTTTTGGAAGGAGTTTTGGCCCTAAACTTGGTAAAAGTGATCCTTGTATTTTTTTTGGCATG
649 ATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATG
* * * *
14373853 CATAAAAAAATTCAGCTAAAAACTGGAAGTGTACAAGATTTTGTGGCCATATGAAAAAAGTGTCC
714 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
14373918 CCATTTCAGACACTTTAATGGCTACTGACAGCAAACCTGTACAATCTCAAATGCTCTTTAAGGGG
779 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
14373983 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAACAGC
844 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
14374042 ACCCATCGCACATCATGTGCGCACA-CCCCCCTGCCCCCCCGATCGCCGGAACCCTAATGCCGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * * * * * *
14374106 GATCAGGTTCTTCGACAATGCTCCGATGATGGTGCCCCGATGAAGAAAAAAGCAGCACCAACACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * * * *
14374171 TGCCCCAGTCTAGCATGTGTTGCTGCAA-CCTACGGTCCGATCCGATCTTAGACTGGGAATCAAC
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCT-CGGTCCGATCCGATCTTAGACTGGGAATGAAC
* * * * * *
14374235 TTCGTATGCCTAGACTAGGAATAAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGG
195 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * *
14374300 CGCTCAGTCGGCCAGAAGGGCAGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGTGTGCT
260 CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTGCT
* * * * **
14374365 GCCAATCCTACTACCACAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTGAACTTCGT
325 GCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACT---C--CGT
* * *
14374430 ATGCCTAAGCCAACCGACGAAAC--G-A-------GCGGGCGGGCACTACGCCAGCCAGAGTGAT
385 ATGCCTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * *
14374485 GGGATACGCAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCGTATTTCTTCA
450 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* *
14374550 TGCCAATGCCATTTTTGTGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
515 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * * * *
14374615 CATGGCAAGATGACTCGTTTTCTATTTTACATAATTTTTGAAACTTTTTGCCGTTAGGGATTTTT
580 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* * ** * * *
14374680 TAAAATTTTTTCGCAAGGAGTTTTGTTCCCAAACTTTGTAGACATGATCCTTTTATTTTTTTTGG
645 TAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* * * *
14374745 CATGCATAAAAAAATTTAGCTAGAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGT
710 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* *
14374810 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTCTAAAATCTCAAATGCTCTTTAA
775 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
14374875 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGC
840 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * ** ** * * *
14374937 ACCCATCGCACATCATGCGTGCAAACCCCCCCGACCCCCCAAATCACCTGAACTCCAATGCTGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
** * ** * * * ** *
14375002 GGTCAGGTTCTCCGGTGATGCTCTGGTGATCGTGCCCCGGCAAAGAAAAATGTAGC-CCTAGCAG
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC-AGCAC
* * * * *
14375066 ATGCCCAAGCCCAGCATGTGCTGCCGTAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAAC
130 ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
** * * *
14375131 TCTATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATACGGG
195 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * * *
14375196 TGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCAAC-TCAGCATGC
260 CGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCC-CCTTCTGCGTGC
* * **
14375260 TACCGATCCTGCTGCTGCAACCCTTGGT-TCGGTCTGATCTTAGACTGGGAATGAACTCTATATG
324 TGCCGATCCTGCTGCCGCAACCCTTGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
14375324 CCTAAGCCAACCGACGAAACGAGCA--GGCGGGCGGACGGGCACTACGCCGGCCAGAGAAACGGG
388 CCTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* * * *
14375387 ATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTAGCTTTAGGCACATCTTCATATTTTTGCATGC
453 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* *
14375452 CAATGCCATTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTAAT
518 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * *
14375517 GGCAAGACGACTTGCTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTCGGGATTTTTCAA
583 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
** * *
14375582 AATTTTTTCAAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCAT
648 AATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCAT
* * *
14375647 GCACAAAAAAATTAAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTC
713 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
14375712 TCCATTTTAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
778 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
*
14375777 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGC
843 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
14375837 ACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGAAACCCCAAAGCTGTC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * *
14375901 GGTCAGGTTCTCCAATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAA-ACGGCACCAGCGCA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * ** **
14375965 TGCCCGAGCCCAGCATGTGCTGCAGCAACCCTTGATCTAATTTGATCTTAGACTGGGAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* * **
14376030 TCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTGTAGGC
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* *
14376095 GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTT-TGCATGCT
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGT-CCCCTTCTGCGTGCT
* * * ** *** * *
14376159 GTCAATCCTGCTGCTGCAACCCTCAGTCCAATCCGATCTTAGACTGGGAATGAACTCCGTATTCC
325 GCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* *
14376224 TAAGCCAACCGACGAAACGAG-A-----GGGTGGGCGGGCACTACGTCGGCCAGAGAGACGGGAT
390 TAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * * * *
14376283 GCGCAAGTCATGTATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCA
455 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
*
14376348 ATGCCATTTCTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
520 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* **
14376413 TAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
585 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* ** * *
14376478 TTTTTTTGGAAGGTTTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA-TTTTGTTGGCATGC
650 TTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
14376542 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
715 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
14376607 CATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
780 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *** * *
14376672 TGTGAGTTCTCGTGGTTTGATGAAGGATCTAGGGCCAATATGAGGGCCAAGTACTAGC
845 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
14376730 ACCCATCGCAGATCAAGTGCGCACA-CCCCCTGGCCCCCCCGATCGTCGAAACCCCAATGCCGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* ** * *
14376794 AGTCAGGTTCTCTAACGTTGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * * *
14376859 TGCCCGAGCCCAGCATGTGCTACCGCAGCCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* *
14376924 CCGTAAGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGC
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * * *
14376989 GCTCAGTCGGCCAGAGGGACGGGATGCACAAGCTGTGGATCGGTCGGCTCCCCCTCTACGTGCTG
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTGCTG
* ** * * ** *
14377054 CCGATCTTGCTATCGCAACCCTTTGTTTGGTCCAATCTTATACTGGGAATGAACTCCGTATGCCT
326 CCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
14377119 AAGCCAACCGATGAAACGAATG-GGCGGACGGGCGGG-GGGCACTACGTCGACCTGAGAGACGGG
391 AAGCCAACCGACGAAACG-A-GCAGCGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
* *
14377182 ATGCGCAAGCCGTGGATCGATAGGGTGGTCGGTGTGTTTAGGCACATCTTCATATTTCTGCATGC
453 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* *
14377247 CAATGCCATTTTTATGGCTTGTAAATTCATAGAATGGTCCGTTAAGCCTTCACGTGAAGTTTCAT
518 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* *
14377312 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACGTTTTACGGTTCGAGATTTTTTAA
583 GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAA
* *
14377377 AATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCAT
648 AATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCAT
* *
14377442 GCACAAAAAAATTAAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
713 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * * *
14377507 CCCATTTTAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGG
778 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
14377572 GGTGTGAGTTCTTGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAATACCAGC
843 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * **
14377632 ACCCATCGCACATCATGTGTGCACA-CCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCTGTT
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * * * * ** * * *
14377696 GGTCTGGTTCTCCGATGATGCGCTGACGATGGTGTCCTGGTGAAGAAAAA-ACGACCCCAGCACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * * * * **
14377760 TGCCTGAGCCCAGCATGTGCTACCGTAACTCTTGGTCCGATCCAATCTTAGACTGACAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* * **
14377825 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCAAGC
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
* * * * * * * *
14377890 GCTTAATCGGCCAGAGGGGCGGTATGCGCAAGTCGAGGATCGACCGGGTCCCCTTCTACGTGCTA
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTGCTG
* * ** ** * * *
14377955 CCTATTCTGCTGCTACAACCCTCAGTCTGGCCTTATCTTAGACTAGGAATGAACTCCGTATGCCT
326 CCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
14378020 AAGCCAACCGACGAAACAAGCGGGCGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGTT
391 AAGCCAACCGACGAAACGAGC-AGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* * *
14378085 GCGCAAGCCGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCA
455 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
14378150 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
520 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* ** * * * *
14378215 CAAGACGGCTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTGCAGTTCTGGATTTTTTAAAA
585 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* * * **
14378280 TTTTTTCGAAAGGAATTTTGGCCCCAAAATTTTTAGACGTGATCCTTGTATTTTTTTTGGCATGC
650 TTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
* * *
14378345 ACAAAAACATTCAGCTAAAAACTTGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
715 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * *
14378410 CATTTCAAACACTTTTATGGCTACTAGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
780 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* **
14378475 TGTGAGTTATCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATGAGC
845 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
14378533 ACCCATGGCACATCATGTGCGCACACCCACCCCCCGACCCCCCCGATCGTCGGAACCCAAATGCC
1 ACCCATCGCACATCATGTGCGCACA--C-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCC
* * * ** * *
14378598 GTCGGAT-A-GTT-TTC--CG--G-T-----GATGATGCCCCGGTGAAGAAAAATGCAGCACCAA
63 GCCGG-TCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG
* *
14378650 CACATGCCCGAACCCAGCATGTGCTGCCACAA-CCT---T-C-A---G-TC-T--A----G--T-
127 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
*
14378695 ---T-CG-AT-ATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
192 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * *
14378754 GGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGT
257 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGT
* * ** * * ** *
14378819 GCTGTCGATCCTACTATCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTTCGTAT
322 GCTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * * * * *
14378884 ACCTAAGCCAACCGACGAAACGAGCAAGCGAGCGAGCAGACGGGCACTACGCAGGCCAAAGAGAT
387 GCCTAAGCCAACCGACGAAACGAGC-AGCG-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * *
14378949 GGGATGCGCAAGCCGTGGATCTATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACT
450 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* * * *
14379014 TGCTAATGCCATTTTTTTGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTCCACGTGAAGTTT
515 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * ** * *
14379079 CATGGCAAGATGACTCGTTTTCTATTTTTCATAATTTTTGAAACGTTTTGGGGTTTGAGATTTTT
580 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* * * * * *
14379144 TAAAATTTTTCTGGAAGGATTTTTGGCCCCAAACTTGGTACACGTGATTCTTGTATTTTTGTTGG
645 TAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* * *
14379209 CATGTACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAT
710 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * *
14379274 GTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTGAA
775 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * *
14379339 GGGGGTGT-ATGTTCTTGAAGTTTGATGAGGGATAGGGGGTCAATATAAGGGCCAAGTACCAGC
840 GGGGGTGTGA-GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
14379402 ACCCATCGCGCATCATGTGCGCACACCCCCCCTCGGCCCCCTCTATTG-CTGGAACCCCAATGCC
1 ACCCATCGCACATCATGTGCGCACA-CCCCCC-CGGCCCCCCCGATCGTC-GGAACCCCAATGCC
* * * * * * *
14379466 GTCGGTCAGGTTCTCTGGCAATGCTCCGGCGATGATGCCCC-AGCGAAGAAAAATGCGGCACTAG
63 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAG
* * *
14379530 CACATGCCCGAGCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATG
127 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATG
*
14379595 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGC
192 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * * *
14379660 GTGCGCTCAGTAGGCCAAAAGGGCGGGATGCGAAAGCTGGGGATCGGCCGGGTCCTCC-TCTGAG
257 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCC-CCTTCTGCG
* * * * **
14379724 TGCTGCCGATCCTACTGCTGCAACCATCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTA
321 TGCTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * * * *
14379789 TGCCTAAGCCAACCGACGAAATGAACGGGCGGTCGGCCAGGCGGGCACTACGTCGACCAGAGAGA
386 TGCCTAAGCCAACCGACGAAACGAGC-AGCGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * * * *
14379854 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGATTTTGGCACATCTTTATATTTCAGT
449 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* * * * * *
14379919 GTGCCACTGCCATTTTTAGGGCTTGCAAACTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTT
514 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
*
14379984 TCATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCGGGATTTT
579 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTT
* * *
14380049 TTAAAA-TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTAGTAGACATGATCCTTGTATTTTTTTT
644 TTAAAATTTTTTTGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTT
* * * * *
14380113 GGCATGCACAAAAAACTTCAACTAAAAACACGAACTGTCCAAGATTTTGTGACCATTTGAAAAAA
708 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
14380178 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
773 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
14380243 AATGGGGTGTGAGTTCTCGAGGTTTGATCAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
838 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
14380308 ACCCATGGCACATCATGTGTG--CA--------GACCCCCCGATCGCCGGAACCCCAATGCCGTC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* * * * *
14380363 GGTCAGGTTTTTCGATGATGATCCGATGATGGTGCCCCG-CTGAAGAAAAGAAT--GGCACCAGC
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC-GAAG-AAA-AATGCGGCACCAGC
* * * *
14380425 ACATGCCCGAGCCCAACATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTGGAGTGGGAATGA
128 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGA
* * * * *
14380490 ACTCCGTAAGCTTAGACTGGGAATGAACTCTGTGTGCCTAAGTCAACCCACGAAACAAGCGTGTG
193 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * ** *
14380555 GGTGCTCAG-CTGGCC-GAAGGGGTC-GAATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGC
258 GGCGCTCAGTC-GGCCAG-AGGGG-CGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGC
* * * ** **
14380617 GTCCTGCCGATCCTTCTGCCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGT
320 GTGCTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
* * *
14380682 ATGCCTAAGCCATCCAACGAAACAAGC-G-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
385 ATGCCTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * ***
14380745 GGGATGTGCAAGCCGTGGATCGATAGCGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTATT
450 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
*
14380810 TGCCAATGCCATTTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
515 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * *
14380875 CATGGCGAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTTGGGATTTTT
580 CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
* * * * *
14380940 TAAAATTTTTTCGGAAGGAGTTTCGGCCCCAAACTTGGTAGAAGTGATCCTTTTATTTTTTTTGG
645 TAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* *
14381005 CATGCACAAAATAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
710 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
* * * *
14381070 GTCCCCATTTCAGACACTTTAGTGGCTACTGGTAGCAAACCGGTAAAATCTCAAATGCTTTTTAA
775 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* * * *
14381135 GGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGCGCGAACATAAGGGCCAAGTACCAGC
840 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* ** * **
14381198 ACCCATCACACAT-ATTGTGCGCACA-CCCCCTAGCCCCCCCGATCGCCGGAACCCCAATGCTAC
1 ACCCATCGCACATCA-TGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGC
* * *
14381261 CGGTCAGGTTCTCTG-CTGATTCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
65 CGGTCAGGTTCTCCGAC-GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
* * * * * ** *
14381325 TATGCCCAAGCCTAGCATGTGCTACCACAACCCTCAATCCGA-CTCGATCTTAGACTTGGAATGA
129 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATC-CGATCTTAGACTGGGAATGA
** * *
14381389 ACTCCGTATGCTTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACA
193 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
* * * * * * *
14381454 GGCGCTCAGCCGGCCAGAGGAGCGGGATGTGCAAGCCGGGGACCGACTGGGTCCCCTTCTGTGTG
258 GGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTG
* * ***
14381519 CTGCCAATCCTGCTGTCGCAACCCTTGGTCCACTCTGATCTTAGACTGGGAATGAACTCCGTATG
323 CTGCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
** * * * *
14381584 CCTAAGCCAGTCGATGAAACGAGCA------GGCGGGCGAGCACTACGCCAGCCAGAGAGATGGG
388 CCTAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGG
14381643 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
453 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
* *
14381708 CAATGCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCAT
518 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * * * * **
14381773 GGGAAGACGACTCGTTTTCTTTTTTTGA-AACTTTTTTGGAAGGAGTTTTGGAACCCTAAACCCT
583 GGCAAGACGACTCGTTTTCTATTTTTCATGA--TTTTT-GAA--ACTTTT-------T--ACGGT
*** * * * *
14381837 AAACCCTAAACCCTAAACAATTTTTGAAACTTTTTACAGTTCGGGATTTTTTAA-AATTTTTTTG
634 ------T-----C---GGGATTTTTTAAAATTTTT----TT---GA------AAGGA--GTTTTG
**** *** * * * * * * *
14381901 GAAGGAGTTTTGGAACCAAACGTGGTAGACGTGATCCCTCTATCTTTTTTTGCACGCACAAAAAA
670 GCCCCAAACTTGG----TAG--------ACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
* * *
14381966 ATTCAGCTAAAAACTCGAAGCGTACAAGATTTTCTGACCATTTGAAAAAAGTGTTCCCATTTCAG
723 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
14382031 ACACTTTAATGGCTGCTGGCAGCAGACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTT
788 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
14382096 CTCAAGGTTTGAAGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
853 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* *
14382146 AGCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGCCGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* *
14382210 GGTCAGGTTCTTCGACGATGCT-C--C-A--GT--------GAAGAAAAATGCGGTACCAGCACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
** * * * * *
14382261 TGCCCGAAACCAGCATGTGTTGCCGCAACCCTCGGTCCGGTCAGATCTGAGACTAGGAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
* *
14382326 CCGTATGCTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
196 CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
** * * * * * * * * *
14382391 ATTCAGCCTGCCAGAGGGGCGGGATTCGTAAGCTGAGGATCGACCAGGT-CCCTCTCTTCGTGCT
261 GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCT-TCTGCGTGCT
* * * ** *
14382455 GCCGATCTTGCTGCCGCAACTCTTGGTCTAGTCCAATCTTAGACTGTGAATGAACTCCGTATGCC
325 GCCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
* * *
14382520 TAAGCCAACCGACGAAAC--G-A---GCGTGCGGGCGGGCACTACGCTGACCAGAGAGACGGGAT
390 TAAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* ** *
14382579 GCGCAAGCCCTGGATCGATAGGGTGGTAGGTGGGTTTAGAAACATCTTCATATTTTTGCATGCCA
455 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* * * *
14382644 ATGCCATTTTTATGGCTTTTAAATTCATACAATGGACCCTTAAGCCATCACATGAAGTTTCATGG
520 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
** ** *
14382709 CAAGAATACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAA
585 CAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA
* **
14382774 -TTTTTTCAGAAGGAGTTTTGGCCCCAAACTTTCTAGACGTGATCCTTGTATTTTTTTTGGCATG
650 TTTTTTTGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATG
* *
14382838 CAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTGC
714 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
14382903 CCATTTTAGACACTTTAATGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTCTTTAAGGGG
779 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
14382968 GTGTGAGTTCTCAAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTACCAGC
844 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
** * *
14383027 ACCCATCGCACATCATGTGCGCACACCCCCAAGGCCCCCCCGATCGTCAGAACCCCAATGTCGCC
1 ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
* ** * ** *
14383092 GGTCAGGTTCTCTGGTGATGCTCTGGTGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACA
66 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
* * * * * * * **
14383157 TGCCTGAGCCCAACATGTGCTGTCACAACCCTCAGTCCGGTCTGATCTTAGACTATGAATGAACT
131 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
14383222 CCGTATGC
196 CCGTATGC
14383230 CTAAGCCAAC
Statistics
Matches: 14064, Mismatches: 1916, Indels: 688
0.84 0.11 0.04
Matches are distributed among these distances:
856 4 0.00
857 168 0.01
858 2 0.00
859 3 0.00
862 1 0.00
863 7 0.00
864 387 0.03
865 395 0.03
866 244 0.02
867 16 0.00
868 220 0.02
869 462 0.03
870 4 0.00
871 2 0.00
872 1 0.00
873 1 0.00
874 1 0.00
875 2 0.00
877 2 0.00
878 1 0.00
879 3 0.00
880 58 0.00
881 505 0.04
882 60 0.00
883 85 0.01
884 3 0.00
885 1 0.00
886 1 0.00
888 6 0.00
889 11 0.00
890 593 0.04
891 37 0.00
892 501 0.04
893 450 0.03
894 929 0.07
895 520 0.04
896 604 0.04
897 549 0.04
898 711 0.05
899 1431 0.10
900 110 0.01
901 1024 0.07
902 389 0.03
903 241 0.02
904 310 0.02
905 311 0.02
906 1447 0.10
907 416 0.03
908 84 0.01
910 1 0.00
914 1 0.00
915 1 0.00
921 3 0.00
922 14 0.00
923 1 0.00
926 1 0.00
929 1 0.00
930 5 0.00
931 1 0.00
932 4 0.00
933 9 0.00
934 420 0.03
935 5 0.00
936 10 0.00
940 1 0.00
942 2 0.00
944 1 0.00
945 1 0.00
947 1 0.00
948 266 0.02
949 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (902 bp):
ACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCC
GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA
TGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACT
CCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
GCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCTTCTGCGTGCTG
CCGATCCTGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACGAAACGAGCAGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATG
CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
AAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAAT
TTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCA
CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
Found at i:14371625 original size:26 final size:26
Alignment explanation
Indices: 14371589--14371641 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14371579 CTGGTCCAAT
* *
14371589 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14371615 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
14371641 C
1 C
14371642 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:14374255 original size:26 final size:26
Alignment explanation
Indices: 14374219--14374272 Score: 74
Period size: 26 Copynumber: 2.1 Consensus size: 26
14374209 GATCCGATCT
* *
14374219 TAGACTGGGAATCAACT-TCGTATGCC
1 TAGACTAGGAATAAACTCT-GTATGCC
14374245 TAGACTAGGAATAAACTCTGTATGCC
1 TAGACTAGGAATAAACTCTGTATGCC
14374271 TA
1 TA
14374273 AGTCAACCCA
Statistics
Matches: 25, Mismatches: 2, Indels: 2
0.86 0.07 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.20, G:0.20, T:0.28
Consensus pattern (26 bp):
TAGACTAGGAATAAACTCTGTATGCC
Found at i:14375164 original size:26 final size:26
Alignment explanation
Indices: 14375113--14375165 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14375103 CTGGTCCGAT
*
14375113 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14375139 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14375165 C
1 C
14375166 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14376047 original size:26 final size:26
Alignment explanation
Indices: 14376011--14376063 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14376001 CTAATTTGAT
*
14376011 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14376037 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14376063 C
1 C
14376064 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14376941 original size:26 final size:26
Alignment explanation
Indices: 14376905--14376954 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
14376895 CTGGTCTGAT
14376905 CTTAGACTGGGAATGAACTCCGTAAG
1 CTTAGACTGGGAATGAACTCCGTAAG
14376931 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
14376955 TGCCTAAGTC
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.20, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTAAG
Found at i:14377771 original size:901 final size:899
Alignment explanation
Indices: 14373353--14383229 Score: 11581
Period size: 901 Copynumber: 11.0 Consensus size: 899
14373343 CTGGTCCGAT
* * * * *
14373353 CTTAGACTGGTAATGAACTTCATATGCCTAAGTCAACCCATGAAACCAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* ** * * * * * *
14373418 CGACCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCTGGGTTCCCCACTGCTTGCTTCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * *
14373483 TACTATGGCAACCGTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14373548 TCGACAAAACG-A-----GCGAGC---GGGCATTACGCCGACCAGAGAGACGGGATGCGCAAGCC
196 CCGACGAAACGAAGGGCGGCGGGCGGGGGGCACTACG-CGACCAGAGAGACGGGATGCGCAAGCC
* * * *
14373604 GTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCACTACCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
14373669 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14373734 TCGTTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTT-TGGATTTTTTAAAATTTTTTTGG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGA
* * * *
14373798 AAGGAGTTTTGGCCCTAAACTTGGTAAAAGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
* * *
14373863 TTCAGCTAAAAACTGGAAGTGTACAAGATTTTGTGGCCATATGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14373928 CACTTTAATGGCTACTGACAGCAAACCTGTACAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
*
14373993 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAACAGCACCCATCGCACATCAT
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
14374058 GTGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCTAATGCCGCCGATCAGGTTCTTCGACA
715 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* * * * * * *
14374123 ATGCTCCGATGATGGTGCCCCGATGAAGAAAAA-AGCAGCACCAACACATGCCCCAGTCTAGCAT
780 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATA-CGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * *
14374187 GTGTTGCTGCAA-CCTACGGTCCGATCCGATCTTAGACTGGGAATCAACTTCGTATG
844 GTGCTGCCGCAACCCT-CGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14374243 CCTAGACTAGGAATAAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * *
14374308 CGGCCAGAAGGGCAGGATGCGCAAG-TCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * **
14374372 CTACTACCACAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATGAACTGAACTTCGTATGCCTA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACT---C--CGTATGCCTA
* * * *
14374437 AGCCAACCGACGAAACG-A-----GCGGGC---GGGCACTACGCCAGCCAGAGTGATGGGATACG
190 AGCCAACCGACGAAACGAAGGGCGGCGGGCGGGGGGCACTACGCGA-CCAGAGAGACGGGATGCG
* * *
14374493 CAAGCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACATCTTCGTATTTCTTCATGCCAATG
254 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* *
14374558 CCATTTTTGTGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
319 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * * *
14374623 GATGACTCGTTTTCTATTTTACATAATTTTTGAAACTTTTTGCCGTTAGGGATTTTTTAAAATTT
384 GACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * ** * * * *
14374688 TTTCGCAAGGAGTTTTGTTCCCAAACTTTGTAGACATGATCCTTTTATTTTTTTTGGCATGCATA
449 TTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACA
* * *
14374753 AAAAAATTTAGCTAGAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
514 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14374818 TTCAGACACTTTAATGGCTACTGGCAGCAAACTTCTAAAATCTCAAATGCTCTTTAAGGGGGTGT
579 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
14374883 GAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
644 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * ** * * * * *
14374947 CATCATGCGTGCAAACCCCCCCGACCCCCCAAATCACCTGAACTCCAATGCTGCCGGTCAGGTTC
709 CATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
** * ** * * * *** * *
14375012 TCCGGTGATGCTCTGGTGATCGTGCCCCGGCAAAGAAAAATGTAGC-CCTAGCAGATGCCCAAGC
773 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACC-AGCACATGCCCGAGC
* * * **
14375076 CCAGCATGTGCTGCCGTAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTATATG
837 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14375139 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATACGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * ** * * *
14375204 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCAACTCAGCATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * **
14375269 TGCTGCTGCAACCCTTGGT-TCGGTCTGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCA
131 TGCTACCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14375333 ACCGACGAAACG-A--GCAGGCGGGCGGACGGGCACTACGCCGGCCAGAGAAACGGGATGCGCAA
195 ACCGACGAAACGAAGGGC-GGCGGGCGG-GGGGCACTACG-CGACCAGAGAGACGGGATGCGCAA
* * * *
14375395 GCCGTGGATCAATAGGGTGGTAGGTAGCTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14375460 TTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
14375525 GACTTGCTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTCGGGATTTTTCAAAATTTTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
** * *
14375590 CAAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
452 TGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* * * * *
14375655 AAATTAAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCTCCATTTT
517 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
14375720 AGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
582 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
14375785 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACAT
647 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
14375850 CATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAAAGCTGTCGGTCAGGTTCTCCA
712 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* *
14375915 ATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAA-ACGGCACCAGCGCATGCCCGAGCCCAGC
777 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
* * * *** ** *
14375979 ATGTGCTGCAGCAACCCTTGATCTAATTTGATCTTAGACTGGGAATGAACTTCGTATG
842 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* ** *
14376037 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCCACGAAACGAGCGTGTAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * *
14376102 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTTTGCATGCTGTCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *** * *
14376167 TGCTGCTGCAACCCTCAGTCCAATCCGATCTTAGACTGGGAATGAACTCCGTATTCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14376232 CCGACGAAACG-AGAG-GGTGGGC---GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGTC
196 CCGACGAAACGAAGGGCGGCGGGCGGGGGGCACTACG-CGACCAGAGAGACGGGATGCGCAAGCC
* * * *
14376292 ATGTATCGATGGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
14376357 CTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGTAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
** *
14376422 TCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGA
** * *
14376487 AAGGTTTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTA-TTTTGTTGGCATGCACAAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
14376551 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14376616 CACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *** * * * *
14376681 TCGTGGTTTGATGAAGGATCTAGGGCCAATATGAGGGCCAAGTACTAGCACCCATCGCAGATCAA
650 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * **
14376746 GTGCGCACACCCCCTGGCCCCCCCGATCGTCGAAACCCCAATGCCGCCAGTCAGGTTCTCTAACG
715 GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* * *
14376811 TTGCTCCGACGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
780 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * *
14376876 TGCTACCGCAGCCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAAG
845 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
*
14376931 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * *
14376996 CGGCCAGAGGGACGGGATGCACAAGCTGTGGATCGGTCGGCTCCCCCTCTACGTGCTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * ** *
14377061 TGCTATCGCAACCCTTTGTTTGGTCCAATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
14377126 CCGATGAAACGAATGGGCGGACGGGCGGGGGGCACTACGTCGACCTGAGAGACGGGATGCGCAAG
196 CCGACGAAACGAA-GGGCGG-CGGGCGGGGGGCACTACG-CGACCAGAGAGACGGGATGCGCAAG
* *
14377191 CCGTGGATCGATAGGGTGGTCGGTGTGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* *
14377256 TTTTATGGCTTGTAAATTCATAGAATGGTCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
14377321 ACTCGTTTTCTATTTTTCATGATTTTTGAAACGTTTTACGGTTCGAGATTTTTTAAAATTTTTTT
388 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTT
* *
14377386 GAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCATGCACAAAAA
453 GAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
* * *
14377451 AATTAAGCTAAAAACTAGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14377516 GACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
14377581 TCTTGAGGTTTGATGAGGAATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
14377646 ATGTGTGCACACCCCCCGGCCCCCCCGATCGCCAGAACCCCAATGCTGTTGGTCTGGTTCTCCGA
713 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * * * * ** * * *
14377711 TGATGCGCTGACGATGGTGTCCTGGTGAAGAAAAA-ACGACCCCAGCACATGCCTGAGCCCAGCA
778 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * * **
14377775 TGTGCTACCGTAACTCTTGGTCCGATCCAATCTTAGACTGACAATGAACTCCGTATG
843 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** * *
14377832 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGGAACGAGCGTGCAAGCGCTTAAT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * * *
14377897 CGGCCAGAGGGGCGGTATGCGCAAG-TCGAGGATCGACCGGGTCCCCTTCTACGTGCTACCTATT
66 CGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* ** * * * *
14377961 CTGCTGCTACAACCCTCAGTCTGGCCTTATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
14378026 ACCGACGAAAC-AAGCGGGCGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGTTGCGCA
195 ACCGACGAAACGAA--GGGCGGCGGGCGGG-GGGCACTACG-CGACCAGAGAGACGGGATGCGCA
* * *
14378090 AGCCGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
14378155 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* ** * * * *
14378220 CGGCTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTGCAGTTCTGGATTTTTTAAAATTTTT
386 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * **
14378285 TCGAAAGGAATTTTGGCCCCAAAATTTTTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
451 TTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* * *
14378350 AACATTCAGCTAAAAACTTGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
14378415 CAAACACTTTTATGGCTACTAGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* ** *
14378480 GTTATCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATGAGCACCCATGGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
14378545 TCATGTGCGCACACCCACCCCCCGACCCCCCCGATCGTCGGAACCCAAATGCCGTCGGAT-A-GT
711 TCATGTGCG--CA--CACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGG-TCAGGT
* * ** * * * *
14378608 T-TTC--CG--G-T-----GATGATGCCCCGGTGAAGAAAAATGCAGCACCAACACATGCCCGAA
771 TCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* *
14378662 CCCAGCATGTGCTGCCACAA--C-C--T----TCAG-TC-T--A----G--T----T-CG-AT-
836 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14378700 ATTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* *
14378765 CGGCCAGAGGGGCGGGATGCGCAAG-TCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCT-GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * ** * *
14378829 CTACTATCGCAACCCTCGATCCAGTCTGATCTTAGACTGGGAATGAACTTCGTATACCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * ** * * *
14378894 ACCGACGAAACG-AGCAAGCGAGCGAGCAGACGGGCACTACGCAGGCCAAAGAGATGGGATGCGC
195 ACCGACGAAACGAAG--GGCG-GCGGGC-GGGGGGCACTACGC-GACCAGAGAGACGGGATGCGC
* * * *
14378958 AAGCCGTGGATCTATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACTTGCTAATGC
255 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * *
14379023 CATTTTTTTGGCTTGTAAATTCTTACAATGGTCCCTTAAGCCTCCACGTGAAGTTTCATGGCAAG
320 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * ** * *
14379088 ATGACTCGTTTTCTATTTTTCATAATTTTTGAAACGTTTTGGGGTTTGAGATTTTTTAAAATTTT
385 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * * * * *
14379153 TCTGGAAGGATTTTTGGCCCCAAACTTGGTACACGTGATTCTTGTATTTTTGTTGGCATGTACAA
450 TTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA
* *
14379218 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATT
515 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
14379283 TCAGACACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTGAAGGGGGTGT-
580 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14379347 ATGTTCTTGAAGTTTGATGAGGGATAGGGGGTCAATATAAGGGCCAAGTACCAGCACCCATCGCG
645 A-GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
14379412 CATCATGTGCGCACACCCCCCCTCGGCCCCCTCTATTGCTGGAACCCCAATGCCGTCGGTCAGGT
709 CATCATGTGCGCACA--CCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGT
* * * * * * *
14379477 TCTCTGGCAATGCTCCGGCGATGATGCCCC-AGCGAAGAAAAATGCGGCACTAGCACATGCCCGA
771 TCTCCGACGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATACGGCACCAGCACATGCCCGA
* *
14379541 GCCCAGCATGTGCTACTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
835 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14379606 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGTGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * *
14379671 AGGCCAAAAGGGCGGGATGCGAAAGCTGGGGATCGGCCGGGTCCTCCTCTGAGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * **
14379736 TACTGCTGCAACCATCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14379801 CCGACGAAATGAACGGGCGGTCGGCCAGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAA-GGGCGG-CGGGC-GGGGGGCACTACG-CGACCAGAGAGACGGGATGCGCAA
* * * * ** *
14379866 GCCGTGGATCGATAGGGTGGTAGGTGGATTTTGGCACATCTTTATATTTCAGTGTGCCACTGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
14379931 TTTTTAGGGCTTGCAAACTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
14379996 GACTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * *
14380060 TCAGAAGGAGTTTTGGCCCCAAACTTAGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAA
452 TGA-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* * * * *
14380125 AAACTTCAACTAAAAACACGAACTGTCCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
14380190 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAATGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14380255 GTTCTCGAGGTTTGATCAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATGGCACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
14380320 TCATGTGTG--CA-------GACCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTTTTC
711 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * *
14380376 GATGATGATCCGATGATGGTGCCCCG-CTGAAGAAAAGA-ATGGCACCAGCACATGCCCGAGCCC
776 GACGATGCTCCGACGATGGTGCCCCGAC-GAAGAAAA-ATACGGCACCAGCACATGCCCGAGCCC
* * * * * *
14380439 AACATGTGCTGCCGCAACCCTCGGTCCGATCTGATCTTGGAGTGGGAATGAACTCCGTAAG
839 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
14380500 CTTAGACTGGGAATGAACTCTGTGTGCCTAAGTCAACCCACGAAACAAGCGTGTGGGTGCTCAG-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * ** *
14380564 CTGGCC-GAAGGGGTC-GAATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTCCTGCCGA
66 C-GGCCAG-AGGGG-CGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGA
* * * * **
14380627 TCCTTCTGCCACAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
128 TCCTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * *
14380692 CATCCAACGAAAC-AAGCG-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGTGCA
193 CAACCGACGAAACGAAGGGCGGCGGGCGGG-GGGCACTACG-CGACCAGAGAGACGGGATGCGCA
* * ***
14380755 AGCCGTGGATCGATAGCGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTATTTGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
14380820 ATTTTTATGGCTTGTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCGAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
14380885 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTT
386 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
14380950 TCGGAAGGAGTTTCGGCCCCAAACTTGGTAGAAGTGATCCTTTTATTTTTTTTGGCATGCACAAA
451 TTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* *
14381015 ATAATTCAGTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
14381080 CAGACACTTTAGTGGCTACTGGTAGCAAACCGGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGA
581 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
14381145 GTTCTCAAGGTTTGATGAGGGATAGGGCGCGAACATAAGGGCCAAGTACCAGCACCCATCACACA
646 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** ***
14381210 T-ATTGTGCGCACACCCCCTAGCCCCCCCGATCGCCGGAACCCCAATGCTACCGGTCAGGTTCTC
711 TCA-TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * * *
14381274 TG-CTGATTCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCATATGCCCAAGCCT
775 CGAC-GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC
* * ** * *
14381338 AGCATGTGCTACCACAACCCTCAATCC-GACTCGATCTTAGACTTGGAATGAACTCCGTATG
839 AGCATGTGCTGCCGCAACCCTCGGTCCGGTC-CGATCTTAGACTGGGAATGAACTCCGTATG
** * * *
14381399 CTTAGACTGGGAATGAACTCTATATGCCTAAGTCAACCCACGAAACGAGCGTACAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * * * *
14381464 CGGCCAGAGGAGCGGGATGTGCAAGCCGGGGACCGACTGGGTCCCCTTCTGTGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * *** *
14381529 TGCTGTCGCAACCCTTGGTCCACTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAG
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14381594 TCGATGAAACG-A--GCAGGCGGGC---GAGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGC
196 CCGACGAAACGAAGGGC-GGCGGGCGGGGGGCACTACGCGA-CCAGAGAGACGGGATGCGCAAGC
14381653 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * *
14381718 TTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGGAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * **
14381783 CTCGTTTTCTTTTTTTGA-AACTTTTTTGGAAGGAGTTTTGGAACCCTAAACCCTAAACCCTAAA
389 CTCGTTTTCTATTTTTCATGA--TTTTT-GAA--ACTTTT-------T--ACGGT------T---
*** * * * * **** ***
14381847 CCCTAAACAATTTTTGAAACTTTTTACAGTTCGGGATTTTTTAA-AATTTTTTTGGAAGGAGTTT
431 --C---GGGATTTTTTAAAATTTTT----TT---GA------AAGGA--GTTTTGGCCCCAAACT
* * * * * * *
14381911 TGGAACCAAACGTGGTAGACGTGATCCCTCTATCTTTTTTTGCACGCACAAAAAAATTCAGCTAA
476 TGG----TAG--------ACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
* * *
14381976 AAACTCGAAGCGTACAAGATTTTCTGACCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAAT
529 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * * *
14382041 GGCTGCTGGCAGCAGACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCAAGGTTT
594 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* *
14382106 GAAGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAGCCATCGCACATCATGTGCGCACA
659 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * *
14382171 CCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCT-C--
724 CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGA
* * ** *
14382233 C-A--GT--------GAAGAAAAATGCGGTACCAGCACATGCCCGAAACCAGCATGTGTTGCCGC
789 CGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
* * *
14382287 AACCCTCGGTCCGGTCAGATCTGAGACTAGGAATGAACTCCGTATG
854 AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** *
14382333 CTTAGACTAGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCATTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
* * * * * * * * *
14382398 CTGCCAGAGGGGCGGGATTCGTAAGCTGAGGATCGACCAGGTCCCTCTCTTCGTGCTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * ** *
14382463 TGCTGCCGCAACTCTTGGTCTAGTCCAATCTTAGACTGTGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
14382528 CCGACGAAACG-A--GCGTGCGGGC---GGGCACTACGCTGACCAGAGAGACGGGATGCGCAAGC
196 CCGACGAAACGAAGGGCG-GCGGGCGGGGGGCACTACGC-GACCAGAGAGACGGGATGCGCAAGC
* ** *
14382587 CCTGGATCGATAGGGTGGTAGGTGGGTTTAGAAACATCTTCATATTTTTGCATGCCAATGCCATT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * * * **
14382652 TTTATGGCTTTTAAATTCATACAATGGACCCTTAAGCCATCACATGAAGTTTCATGGCAAGAATA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
** * *
14382717 CTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAA-TTTTTTC
389 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTG
** *
14382781 AGAAGGAGTTTTGGCCCCAAACTTTCTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAA
454 A-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
* *
14382846 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTGCCCATTTTA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
14382911 GACACTTTAATGGCTACTGGTAGCAAACATGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
14382976 TCTCAAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * * *
14383041 ATGTGCGCACACCCCCAAGGCCCCCCCGATCGTCAGAACCCCAATGTCGCCGGTCAGGTTCTCTG
713 ATGTGCGCACACCCCC-CGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
** * ** * *
14383106 GTGATGCTCTGGTGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAAC
777 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
* * * * **
14383171 ATGTGCTGTCACAACCCTCAGTCCGGTCTGATCTTAGACTATGAATGAACTCCGTATG
842 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
14383229 C
1 C
14383230 CTAAGCCAAC
Statistics
Matches: 7696, Mismatches: 1082, Indels: 412
0.84 0.12 0.04
Matches are distributed among these distances:
865 2 0.00
866 1 0.00
867 8 0.00
868 211 0.03
869 453 0.06
870 4 0.00
871 1 0.00
872 1 0.00
874 1 0.00
875 2 0.00
880 56 0.01
881 230 0.03
882 49 0.01
883 2 0.00
884 2 0.00
885 3 0.00
886 1 0.00
888 2 0.00
889 8 0.00
890 593 0.08
891 34 0.00
892 5 0.00
893 327 0.04
894 844 0.11
895 448 0.06
896 588 0.08
897 10 0.00
898 262 0.03
899 788 0.10
900 64 0.01
901 955 0.12
902 282 0.04
903 5 0.00
904 7 0.00
905 45 0.01
906 631 0.08
907 14 0.00
908 3 0.00
910 1 0.00
914 1 0.00
915 1 0.00
921 3 0.00
922 14 0.00
923 1 0.00
926 1 0.00
929 1 0.00
930 5 0.00
932 3 0.00
933 6 0.00
934 426 0.06
935 7 0.00
936 10 0.00
940 1 0.00
942 2 0.00
944 1 0.00
945 1 0.00
947 1 0.00
948 266 0.03
949 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (899 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAAGGGCGGCGGGCGGGGGGCACTACGCGACCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGAA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
TGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14377835 original size:26 final size:26
Alignment explanation
Indices: 14377806--14377858 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14377796 CCGATCCAAT
14377806 CTTAGACTGACAATGAACTCCGTATG
1 CTTAGACTGACAATGAACTCCGTATG
**
14377832 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGACAATGAACTCCGTATG
14377858 C
1 C
14377859 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGACAATGAACTCCGTATG
Found at i:14379609 original size:26 final size:26
Alignment explanation
Indices: 14379580--14379632 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14379570 CCGGTCCGAT
14379580 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14379606 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14379632 C
1 C
14379633 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14381424 original size:26 final size:26
Alignment explanation
Indices: 14381373--14381425 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14381363 CCGACTCGAT
* *
14381373 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14381399 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
14381425 C
1 C
14381426 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14381836 original size:7 final size:7
Alignment explanation
Indices: 14381824--14381854 Score: 62
Period size: 7 Copynumber: 4.4 Consensus size: 7
14381814 GGAGTTTTGG
14381824 AACCCTA
1 AACCCTA
14381831 AACCCTA
1 AACCCTA
14381838 AACCCTA
1 AACCCTA
14381845 AACCCTA
1 AACCCTA
14381852 AAC
1 AAC
14381855 AATTTTTGAA
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
7 24 1.00
ACGTcount: A:0.45, C:0.42, G:0.00, T:0.13
Consensus pattern (7 bp):
AACCCTA
Found at i:14382339 original size:26 final size:26
Alignment explanation
Indices: 14382310--14382359 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14382300 GTCAGATCTG
14382310 AGACTAGGAATGAACTCCGTATGCTT
1 AGACTAGGAATGAACTCCGTATGCTT
*
14382336 AGACTAGGAATGAACTCTGTATGC
1 AGACTAGGAATGAACTCCGTATGC
14382360 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.18, G:0.24, T:0.26
Consensus pattern (26 bp):
AGACTAGGAATGAACTCCGTATGCTT
Found at i:14386663 original size:26 final size:26
Alignment explanation
Indices: 14386626--14386678 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
14386616 TTGGTCCGAT
*
14386626 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14386652 CTTAGA-TCGGGAATGAACTCCGTATG
1 CTTAGACT-GGGAATGAACTCCGTATG
14386678 C
1 C
14386679 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14388436 original size:26 final size:26
Alignment explanation
Indices: 14388400--14388452 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14388390 CTGGTCTGAT
14388400 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14388426 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14388452 C
1 C
14388453 ATAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14388951 original size:900 final size:898
Alignment explanation
Indices: 14384862--14395307 Score: 11336
Period size: 900 Copynumber: 11.6 Consensus size: 898
14384852 TCCGATCTTC
* * * * *
14384862 GACTAGGAATGAACTCCGTATGCCTAAGTCAGCCTC-CGAAACGAGCGTGCGGGCGGTCAACCGT
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACC-CACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * ** * *
14384926 TCAGAGTGGC-AGGATGCGCAAGCCGGGGATCGATCGGGTCCCATTCTACGTGCTGTTGATCCTA
65 CCAGAGGGGCGA-GATGCGCAAG-CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTA
* * * * * * **
14384990 CT-GTCGTAACCCTCAGTCCAGTCTGATGTTAGACTGGGAATGAAATTTGTATGCCTAAGCCAA-
128 CTACT-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *** *
14385053 CGACGAAA-GAAGTGGGTGGGCGGGCGGGCACTACAATGGCCAGAGAGACGGGATGCGCAAGCTG
192 CGACGAAACG-AGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14385117 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
256 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* *
14385182 TATGGTTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
321 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
** *
14385247 CGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGAA
386 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAA
* * * *
14385312 AGGAGTTTTGGCCCCAAACTTGCTAGATGAGATCCTTGTATTTTTGTTGGCTTGCACAAAAAAAT
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
14385377 TCATCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAC
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
14385442 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCT
581 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
14385507 CAAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCTCCCATCCCACATCATG
646 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * *
14385572 CGCGCACATCCCCCCCGG-CCCCCCGATCACCGGAACACTAATGCCGCCGGTCAGGTTCTCCGAC
711 TGCGCACA--CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * * * *
14385636 GATGCTCCGACAATGGTGCCCTGGCGAAGAAAAATGCGACACCAGCACATGCTTGAGCCCAGCAT
774 GATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCAT
* * ** * * *
14385701 GTGCTGTCGCAACCCTCAGTCCAGTCCGATCTTAGACCGGGAATGAAGTTCGTATGCTTA
839 GTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * ** * * * *
14385761 GATTGGGAATGAACTCCATATGCCTATCTCAACCCATGAAACGAGCGAGTGGGCACTCAGCCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * * *
14385826 CAGAGGGCCGGGATGCGCAAATCGGGGATCG-GCTGGGTCCCCCTCTACGTGTTGTCGATCCTGC
66 CAGAGGGGCGAGATGCGC-AAGCGAGGATCGATC-GGGTCCCCCTCTGCGTGCTGTCGATCCTAC
* * * ** * *
14385890 TGCTTCAACCCTCAGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCTAACCG
129 TACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * ** *
14385955 ATGAAACCAACGAGCGGATGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
194 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * *
14386020 ATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTACGTGTCAATGCCA-TTTTAT
259 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
*
14386084 GGCTTGTAAATTCATACAATGGTGCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * *
14386149 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTGGAAGG
389 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* * * * *
14386214 AGTTTTGGCCCCAAA--TGGTAGACATGATCGTTGTGTTTTTATTGGCATGCA-TAAAAAATTCA
454 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
14386276 GCTAAAAACTTGAAGTGTACAAGATTTTGTGACCAATTG-AAAAAGTGTCCCCATTTCAGACACT
519 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
14386340 TTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCAA
584 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
14386405 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCAACGCACATCATGTGT
649 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * *
14386470 GCACACCCCCCCGGCCCCCCTGATCACCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATG
714 GCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
* * * * * *
14386535 CTCTGACGATGGTGCCCCGGCAAAGAAAAATACGACACCAGCACATGCCTGAGCCCAGCATGTGC
778 CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGC
* * * * *
14386600 TGTCGCAACCCCCAGTTTGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTA
843 TGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * * * *
14386656 GA-TCGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGGGCGAGCGGGCACTCAGTCTG
1 GACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* ** * * * * * * *
14386720 CCAAAGGGGCG-GATGCATAAGTCGAGGATCGGTCAGGTCCCTCTCTGCGTACTGTCAATTCTGC
65 CCAGAGGGGCGAGATGCGCAAG-CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTAC
* * * * * *
14386784 TA-TCGTAACCCTTGGGCCGGTCTAATCTTAGACTGGGAATGAAACTCCGTATGCCTAAGCTATC
129 TACT-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATG-AACTCCGTATGCCTAAGCCAAC
* * *
14386848 CGATGAAACGA----GCGGGCGGGC-GG------G-CGGCCAGAGATACGAGATGCGCAAGCCGT
192 CGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
**
14386901 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTT
257 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTT
* * *
14386966 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTAACATGAAGTTTCATGGCAAGACGACTT
322 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * *
14387031 GTTTTCCATTTTTAACGATTTTTGAAACTTTTTGCGGTTCTG-GATTTTTTAAAATTTTTTCGAA
387 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTCGAA
* * *
14387095 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCGTGCAAAAAAAAAT
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
14387160 TCAGCTAAAAACTCGAAGTGTACAAGATTCTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
14387225 ACTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
581 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
14387290 CAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATG
646 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
*
14387355 TGCGCACATCCCCCCCCGG-CCCCCCGAT---C---ACCCCAATGCCGCCGGTCAGGTTCTCCGG
711 TGCGCACA---CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* * * *
14387413 CAATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
773 CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCA
** * * *
14387478 TGTGCTATCGCAATCCTC-GTCTGGTCTGATCATAGACTGGGAATGAACTCCGTATGCTTA
838 TGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * * * *
14387538 TACTGGGAATGAACTCCGTTTGCCTAAGTCAAGCAATGAAACGAGCGTGCGGGCCCTCAGCCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * *
14387603 CAGAGGGGCGGGATGCGCAAGTCGGGGATCGGTCGGGT---CCTCTGCATGCTGTCGATCCTACT
66 CAGAGGGGCGAGATGCGCAAG-CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACT
* * * *
14387665 GCTGCAACCCTCTGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATTCCTAAGCCAACCGA
130 ACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
*
14387730 CGAAACGA----GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGA
195 CGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * * * *
14387790 TCGATAGGGCGGTAGGTGGGTTTAGGTACATCTTCAAATTGCTGTGTGCCAATGCCATTTTTATG
260 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
*
14387855 GCTTGTAAATTCATACAATGGTCCCTTAAGCCATCACGTGAAGTTTCATGGCAAGACGACTCGTT
325 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
14387920 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGA
390 TTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGA
* * *
14387985 TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTGGGCGTGCAAAAAAAAATTCA
455 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCA
*
14388049 GCTAAAAACTCGAAGTGTACAAGATTCTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
519 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
14388114 GTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
584 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
14388179 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
649 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* *
14388244 GCACATCCCCCCGGCCCCCTCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACAATG
714 GCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
* *
14388309 CTCCGGCGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
778 CTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGC
* *
14388374 TGCCGCAATCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTA
843 TGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * *
14388430 GACTGGGAATGGACTCCGTATGCATAAGTCAACCCGCGAAACGAGCGTGCGGGCGCTCAGCCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * *
14388495 CAGAGGGGCGAGATGTGCAAGTCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCAATCCTACT
66 CAGAGGGGCGAGATGCGCAAG-CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACT
** *
14388560 ACTGCAACCCAT-GGTTTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCG
130 ACTGCAACCC-TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
14388624 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAAACGGGAGGCACAAGTCGTGG
194 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * *
14388689 ATCGATAGGGTGGTAGGTGGGTTAAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
259 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
14388754 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* *
14388819 TTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGAAAGG
389 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* * *
14388884 AGTTTTGGCCCCAAACTTGGTAGACCTGATACC-TGTATTTTTGTTGGCATGCACAAAACATTTC
454 AGTTTTGGCCCCAAACTTGGTAGACGTGAT-CCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
14388948 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACAC
518 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
14389013 TTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTG
583 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
14389078 AGTTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCATCATGGGCG
648 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA-C--CA-GCA-C-C--CAT---CG
* * ** **
14389143 CACATCATGTGCGCACATCCCCCCTGGCCCCCCCGATCGCCAGAACCCCAATGCCACTAGTCAAA
702 CACATCATGTGCGCACA-CCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* * ** * ** **
14389208 TTCTCCGGCTATGCTCATGCGATGGTGCCCTGGTGAAGAAAAATGCGGCACCAGCACATGCCCAA
765 TTCTCCGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGA
* *
14389273 GCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATG
830 GCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
14389338 CTTA
895 CTTA
* * * ** *
14389342 GACTGGGAATGAACTCTGTATGCCTAAGTTAACCCACGAAAAGAGCGTGCGGTTGCTCAGTCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * * ** *
14389407 CAGAGGGGCGGGATGCGTAAGCTGGGGATTTGCT-GAGTGCCCCTCTGCGTGCTACCGATCCTGC
66 CAGAGGGGCGAGATGCGCAAGC-GAGGA-TCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTAC
** * * * * *
14389471 TACCACAACCCTTGGTCCGATCTGATCTTAGACTGGGACTAAACTTCGTATGCCTAAGCCAACCG
129 TACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * * *
14389536 ACGAAATGA----GCGAGCGGGTGGGCACTACGCCGACAAGGGAGACGGGATGCGCAAGCCGTGG
194 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * ** * *
14389597 ATTGATAGGATGGTAGGTGGGTTTAAACACATCTTCATATATCTGTGTGCCAATGCCATTTTTAT
259 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
* *
14389662 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCAT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * *
14389727 TTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTCAAAATTTTTTCGGAAGG
389 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* *
14389792 AGTTTT-CCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
454 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
14389856 GCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCGCCATTTCAGACACT
519 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * *
14389921 TTAACGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAAG-TCTCT
584 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG-AGTTCTCG
* * * * **
14389985 AGCTTTGATGAGGAATAGGGGGCCAATATAAAGGCCAAGTACCAGCACCCATTGCATGTCATGTG
648 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * **
14390050 CACACACACCCCCGGCCCCCCCAATCGCTAGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
713 CGCACAC-CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGAT
* * * ***
14390115 GCTCCTGCGATGATGCCCCGGCGAAGAAAAATATTGCACCAGCACATGCCTGAGCCCAGCATGTG
777 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTG
* * *
14390180 CTACTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
842 CTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* *
14390237 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCTGGCGCTCAGCCTGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * * *
14390302 GAAAGGGGC-AGGATGCGCAAGCTAGGGATCGATTGGGTCCCCCTCTACGTGCTGTTGCTGCTAC
66 CAGAGGGGCGA-GATGCGCAAGCGA-GGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTAC
* ** * * * * * * *
14390366 TGCCACAGCCTTCGATCCGGTCTGATCTGAGACAGGGAATGAACTCCGTATGTCTAAGCTAACCG
129 TACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * * * *
14390431 ACAAAACGAGCGAGCGGGCGGGCGGGCACTACACTGGCAAGAGAGGCGGGATGCGCAAGCCATGG
194 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14390496 ATCGATAGGGTGGTAGGTGGGTTTAGGCACACCTTCATATTTCTGTGTGCCAATGCCATTTTTAT
259 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
* *
14390561 GGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
14390626 TTTTTATTTTTCATGATTTTTGAAACTTTTTGCGGTTC-AGGATTTTTTAAAATTTTTTTGAATG
389 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGAAAG
*** * * * *
14390690 GAGTTTTGGCAATAAACTTGGTGGACATGATCCTTGTATTTTTCTTGGCATGCATAAAAAAATTC
453 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
14390755 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
518 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
14390820 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCAATGCTCTTTAAGGGGGTGTGAGTTCTCA
583 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
14390885 AGGTTTGGTGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTG
648 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * *
14390950 GGCTCACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTTAGGTTCTCTGGCGAT
713 CGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC---CGA-
* * ** **
14391015 GCTCTGGCGATGCTCTGGCGATGATGCCCCGGGGAAGAAAAATATGGCACCAGCACATGCCTGAG
773 -------CGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAG
* * * * * * * *
14391080 CCCAGCATATGTTGCCGCAACCCTC-GCCTAGTCTGATCTTAGACTGGAAATAAACTTCGTATGC
831 CCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
14391144 TTA
896 TTA
* * * *
14391147 CACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGTGCTCAGCCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * *
14391212 CAGAGGGGCAAGATGCGCAAGCCGGGGATCGACCGGGT-CCCCTCTGCGTGCTGTCGATCCTACT
66 CAGAGGGGCGAGATGCGCAAG-CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACT
* * *
14391276 ACCGCAACCCTCGATCCGGTCTGATCTAAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
130 ACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * *
14391341 -GCAAAAGAGCAGGCGGGCGGGTGGGCACTACGCCGGCCGGAGAGACGGGATGCCCAAGCCGTGG
195 CG-AAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14391405 ATCGAAAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
259 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
* * *
14391470 GGCTTGTCAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGACGACTTGC
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG-
*
14391535 TTTT-TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTGAAAA-TTTTTC-ACA
388 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTCGA-A
* * * *
14391597 AAGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * *
14391662 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAATTGTCCCAATTTCAGAT
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
14391726 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
581 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* *
14391791 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGTACATCATG
646 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
*** * ** *
14391856 TGCGCACACCCGCCCGGCCCCCCCGATCATTGGAACCCCAATGCTGCCACTCAAGTTCTCCGACG
711 TGCGCACACCC-CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
* * * ** * * *
14391921 ATGATCCAGCGATGGTGCCCTGACGAAGAAAAATGCATCAACAGCACATGCACT-TGCCCAGTAT
775 ATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGC-CTGAGCCCAGCAT
* * * * * *
14391985 GTGCTGTCGCAACCCTCGGTCTGTTCTGATCTTAGACTGGGCATGATCTCCTTATGCTTA
839 GTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * *
14392045 GACTGGGAATGAACTCTGTATGCTTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAACCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* ** * * *
14392110 CAGA-GGGC-AGGATGCGCAAGCTGAGGATC-ATTCGGGTGCCTTTTTGCGTGCTGCCGATCCTG
66 CAGAGGGGCGA-GATGCGCAAGC-GAGGATCGA-TCGGGTCCCCCTCTGCGTGCTGTCGATCCTA
* * * *
14392172 CTAC-ACAAACCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
128 CTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * * * * * * * * *
14392236 CACGAAACGA----ACGTG-TGG-GTGCTC-A-GCCGTCCAGAGGGGCAGGATGTGCAAGCTGGG
193 GACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * ** * * * * * *
14392293 GATCGGTCGTGTCCCCCTCTATGTGCTGCCGATCCTGCT-GCCGCAACCCTCGGTCCGGTCTGAT
258 GATCGATAGGGT-----GGTA-G-G-TG--GGT--T--TAG--GC-A-CATC--TTC-ATAT-TT
** ** *** * * * * * * ** ****
14392357 CTTAGAC-TGGGAAT-TAACTCCGTATGCCTAAGCCAACCGA-TGAAACGAACGAGAGGACGGGC
301 C-T-G-CGTGCCAATGCCA-TTTTTATGGCT-TG-TAA---ATTCATAC-AA--TG-GTCCCTTA
* ** * ** *** * ** ** ** *
14392419 GGCCAGGCAC-T-ACG--TC--GGCCAGAGA-GACGGGATGCGCAAGTCGTGGATCGATAGGGTG
353 AGCC-TTCACGTGAAGTTTCATGG-CA-AGACGACTCG-TTTTCTA-TTTTTCAT-GAT--TTTT
* ** * * * * * * * * * * **
14392477 GTAGGTGGGTTTA-GG-T--ACA--TCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTG
410 GAAACT--TTTTACGGTTCGAGATTTTTTAAAATTT-T---TTCGAAAG-GA-GTTT-TGGC-CC
* ** * * * ** ** * ***** **
14392536 TAAATTCATACAATGGTCCA-TTAAGCCTTCACGTGAAGTTTCATGGCAAG-ACAACTTGTTTTG
465 CAAA--C-T----TGGTAGACGTGATCCTT---GT-ATTTTTGTTGGCATGCACAAAAAAATTCA
*** * * * ** *
14392599 GCCCCAATCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAGAA
519 GCTAAAAAC-TCG-A-A-GTG-TACAAG-A-TTTTG-T-G-A-CCAT-------TT--G--A-AA
*** ** * ** **
14392664 ACTCGAAGTGTACAAGATTTTGTGAC-CATTTGAAAAAAGTGCCCCCATTTCAGACACTTTAGTG
561 A----AAGTGT-CCCCA-TTTCAGACAC-TTT-----AA-TGGCTAC-TGGCAG-CA----A---
* * * ** ** ** * *** * * * *
14392728 GCTACTGGCAGCAAACCTGTAA-AATCTCAAATGCTTTTTAAGGGGGTGTGAGTTTTCGAGGTTT
604 AC--CT-GTA--AAATCTCAAATGCTCTTTAAGGGGGTGTGA-GT---------TCTCGAGGTTT
* *
14392792 GATGAGGGATAGGGCGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACA
654 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* * * **
14392857 CCCCCCGGCCCCCTCGATCGCTGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGTGATGCTCCGG
719 CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGG
* * * * * *
14392922 TGCTGGTGCCCCGACGAAGAAAAATGCGGCACCGGCACATGCCCGAGCCCAGCATGTGCTACCGT
784 CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGC
* * *
14392987 AACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCGGTATGCTTA
849 AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* *
14393037 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGTGTGCGGGCGCTCAGCCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * * * * ** ** *
14393102 TAAAGGGGC-AGGATGCACTAGTCGGGGATCGACCGGGTTTCCCTCAACGTGCTG-CAGATCCTG
66 CAGAGGGGCGA-GATGCGCAAG-CGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATCCTA
* * ** * * * *
14393165 CTACCGTAACCCTTTGTCCAGTCTGACCTTAGACTGGGAATAAACTTCGTATGCCTAAGCCAACC
128 CTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * * *
14393230 GACGGAACGAGCTGGCAGGCGGTCAGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCACAAGC
193 GACGAAACGAGC--G--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
14393295 CGTGGATCGATAGGGTGGTAGGTGGGTTCAGGCACATCTTCATATTTCTGTGTGCCAATGCCATT
254 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATT
* *
14393360 TTTATGGCTTGTAAATTCATACGATGGTCCCTTAAGCCTTCACGTGAAGTTCCATGGCAAGACGA
319 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
14393425 CTCGTTTTCTATTTTTCATAATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTG
384 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAA-TTTTTTC
* * *
14393490 GAAA-GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCCTGAATTTTTGTTGGCATGGACAAAAA
448 GAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * *
14393554 AATTCAGCTAAAAACTCAAACTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
513 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14393619 GACACTTTAATGGGTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTACGGGGGTGTGAGT
578 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
14393684 TCTCGAAGTGTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
643 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
14393749 TTGTGCGCAC-CCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTGC-ACG
708 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT-CTCCG
*
14393812 ACGATGCTCCGACGATGGTGCCTCC-ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAG
772 ACGATGCTCCGGCGATGGTGCC-CCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAG
* * * *
14393876 CATGTGCTACCGTAACCCTCGATCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTA
836 CATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
* * * * * * *
14393939 GACTGGGAACGAACTCTGTATGCCTAAGTCAACCCGCGAAACGAGCATACGGGCGCTCAGCTGAC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * *
14394004 CAGAGGGGC-AGGATGCACAAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTG-CTGATCCTA
66 CAGAGGGGCGA-GATGCGCAAGCGA-GGATCGATCGGGTCCCCCTCTGCGTGCTGTC-GATCCTA
* * ** *
14394067 CTGCCGCAACCCTCAATCCGGTCTGATCTTAGA-TAGGAATGAACTCCGTATGCCTAAGCCAACC
128 CTACTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
14394131 AATGAAAC-AGGCGGGCGGGCGGACGGGCACTACGCCGGCCTGAGAGACGGGATGCGCAAGCCGT
193 GACGAAACGA-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
*
14394195 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
257 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTT
* *
14394260 ATGGCTTGTAAAATCATACAATGGTCCCTTGAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
322 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * * *
14394325 GTTTTCTATTTTTCATGATTTTTGAAACCTTTTGCGGTTCCAGATTTTTTTGAAATTTTTTCGGA
387 GTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGA-TTTTTTAAAATTTTTTCGAA
* * * * *
14394390 AGGATTTTTGGCCCCAAACCTGGTAGACGTGATCTTTGTATTTTTTTTGGCATGCATAAAAAAAT
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
14394455 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGAC
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
14394520 ACTTTAATGGTTACTGGTAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTTCT
581 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
*
14394585 CGAGGTTTGATGAGGGATAGGGGGCCAATA-AAGGGCCAAGTACCAGCACCCATCGCATATCATG
646 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * **
14394649 TGCGCACACCCCCCGGCCCCCCCGATCACCGAAACCCCAATGTCGCCGGTCAGGTTCTCCGGTGA
711 TGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
* * * * * *
14394714 TGCTCCGACGATGGTGCCCC-AGTGAAGAAAAATACGGCACCAGGACATGCCTGAGCACAACATG
776 TGCTCCGGCGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATG
** *
14394778 TGCT------A--CT--G--T-AACC---CTTAGTCT----A-G---TCCG-AT-CTTA
840 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
** * * * *
14394811 GACTGGGAAACAACTTCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAACCGGC
1 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
* * * *
14394876 CAGAGGGGCGGGATGCGCAAGCCAGGGATCGATCGGGTCCCCCTTTGCGTGCTATCGATCCTACT
66 CAGAGGGGCGAGATGCGCAAGCGA-GGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACT
* ** * **
14394941 -GTCGCAACCCTTAGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
130 ACT-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * * * * * *
14395005 ATGAAACGAGCTGGCGGGCGAGTGGGAACTACGTCGGCCAGAGAGACGGTATGCACAAGTCGTGG
194 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
14395070 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAATTTTAT
259 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
* * * * *
14395135 GGCATGTAAATTCATACAATGATCCCTTAAGCCTTCCCGTGAAGTTTCTTGGCAAGAGGACTCGT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* ** * ** * *
14395200 TTTCTATTTTTCACGATTTTCAAAAATTTTTGTGGTTCGAGATTTTTTAAAATTTCTTCGAAAAG
389 TTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGG
* * *
14395265 ATTTTTGGCCCTAAACTTCGTAGACGTGATCCTTGTATTTTTG
454 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
14395308 GCCCTAAACT
Statistics
Matches: 8079, Mismatches: 1179, Indels: 605
0.82 0.12 0.06
Matches are distributed among these distances:
872 194 0.02
873 241 0.03
874 5 0.00
877 1 0.00
878 1 0.00
879 38 0.00
880 52 0.01
881 1 0.00
882 107 0.01
883 205 0.03
884 148 0.02
885 13 0.00
886 483 0.06
887 58 0.01
888 154 0.02
889 39 0.00
890 14 0.00
891 118 0.01
892 134 0.02
893 6 0.00
894 82 0.01
895 795 0.10
896 71 0.01
897 435 0.05
898 443 0.05
899 559 0.07
900 801 0.10
901 44 0.01
902 291 0.04
903 79 0.01
904 6 0.00
905 5 0.00
906 7 0.00
907 207 0.03
908 425 0.05
909 394 0.05
910 133 0.02
911 107 0.01
912 341 0.04
913 13 0.00
914 3 0.00
915 4 0.00
916 13 0.00
917 14 0.00
918 4 0.00
919 8 0.00
920 7 0.00
921 11 0.00
922 4 0.00
923 8 0.00
924 6 0.00
925 6 0.00
926 3 0.00
927 3 0.00
928 1 0.00
931 6 0.00
932 14 0.00
933 3 0.00
934 19 0.00
935 12 0.00
936 1 0.00
937 1 0.00
938 6 0.00
939 4 0.00
940 1 0.00
941 6 0.00
942 1 0.00
943 3 0.00
944 1 0.00
945 3 0.00
950 3 0.00
951 1 0.00
952 3 0.00
953 1 0.00
954 6 0.00
955 1 0.00
956 2 0.00
957 2 0.00
958 4 0.00
959 1 0.00
960 11 0.00
961 12 0.00
962 5 0.00
963 8 0.00
964 13 0.00
967 1 0.00
968 1 0.00
969 2 0.00
970 7 0.00
971 8 0.00
972 9 0.00
973 3 0.00
974 7 0.00
975 9 0.00
976 7 0.00
977 4 0.00
978 15 0.00
979 14 0.00
980 2 0.00
981 4 0.00
982 3 0.00
983 22 0.00
984 10 0.00
985 2 0.00
986 2 0.00
987 2 0.00
989 3 0.00
990 1 0.00
991 3 0.00
992 208 0.03
993 120 0.01
994 62 0.01
996 2 0.00
998 2 0.00
999 1 0.00
1000 1 0.00
1001 2 0.00
1002 2 0.00
1003 2 0.00
1004 4 0.00
1005 1 0.00
1006 32 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGC
CAGAGGGGCGAGATGCGCAAGCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTA
CTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAG
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTC
CGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGC
CGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
Found at i:14389150 original size:13 final size:13
Alignment explanation
Indices: 14389132--14389161 Score: 51
Period size: 13 Copynumber: 2.3 Consensus size: 13
14389122 ACACCCATCG
14389132 CATCATGGGCGCA
1 CATCATGGGCGCA
*
14389145 CATCATGTGCGCA
1 CATCATGGGCGCA
14389158 CATC
1 CATC
14389162 CCCCCTGGCC
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
13 16 1.00
ACGTcount: A:0.23, C:0.33, G:0.23, T:0.20
Consensus pattern (13 bp):
CATCATGGGCGCA
Found at i:14389348 original size:26 final size:26
Alignment explanation
Indices: 14389312--14389364 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14389302 CTGGTCCAAT
14389312 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14389338 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14389364 C
1 C
14389365 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14390236 original size:26 final size:26
Alignment explanation
Indices: 14390207--14390259 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14390197 CCGGTCCGAT
14390207 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14390233 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14390259 C
1 C
14390260 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14391021 original size:11 final size:11
Alignment explanation
Indices: 14391005--14391037 Score: 66
Period size: 11 Copynumber: 3.0 Consensus size: 11
14390995 CGGTTAGGTT
14391005 CTCTGGCGATG
1 CTCTGGCGATG
14391016 CTCTGGCGATG
1 CTCTGGCGATG
14391027 CTCTGGCGATG
1 CTCTGGCGATG
14391038 ATGCCCCGGG
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 22 1.00
ACGTcount: A:0.09, C:0.27, G:0.36, T:0.27
Consensus pattern (11 bp):
CTCTGGCGATG
Found at i:14391161 original size:26 final size:26
Alignment explanation
Indices: 14391117--14391169 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14391107 CTAGTCTGAT
* *
14391117 CTTAGACTGGAAATAAACTTCGTATG
1 CTTACACTGGAAATAAACTCCGTATG
* *
14391143 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGAAATAAACTCCGTATG
14391169 C
1 C
14391170 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTACACTGGAAATAAACTCCGTATG
Found at i:14392051 original size:26 final size:26
Alignment explanation
Indices: 14392015--14392070 Score: 78
Period size: 26 Copynumber: 2.2 Consensus size: 26
14392005 CTGTTCTGAT
* *
14392015 CTTAGACTGGGCATGATCTCCT-TATG
1 CTTAGACTGGGAATGAACT-CTGTATG
14392041 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
14392067 CTTA
1 CTTA
14392071 AGTCAACCCA
Statistics
Matches: 27, Mismatches: 2, Indels: 2
0.87 0.06 0.06
Matches are distributed among these distances:
25 2 0.07
26 25 0.93
ACGTcount: A:0.23, C:0.20, G:0.23, T:0.34
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:14392381 original size:159 final size:157
Alignment explanation
Indices: 14392041--14392407 Score: 473
Period size: 159 Copynumber: 2.3 Consensus size: 157
14392031 TCTCCTTATG
* * * *
14392041 CTTAGACTGGGAATGAACTCTGTATGCTTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAAC
* * ** * *
14392106 CGGCCAGAGGGCAGGATGCGCAAGCTGAGGATCATTCGGGTGCCTTTTTGCGTGCTGCCGATCCT
66 CGGCCAGAGGGCAGGATGCGCAAGCTGAGGATCAGTCGGGTCCCCCTCTACGTGCTGCCGATCCT
14392171 GCTACACAAACCTCGGTCCAGTCTGAT
131 GCTACACAAACCTCGGTCCAGTCTGAT
* * *
14392198 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGTGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAAC
* * * * * *
14392263 CGTCCAGAGGGGCAGGATGTGCAAGCTGGGGATCGGTCGTGTCCCCCTCTATGTGCTGCCGATCC
66 CGGCCAGA-GGGCAGGATGCGCAAGCTGAGGATCAGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * *
14392328 TGCTGCCGCAACCCTCGGTCCGGTCTGAT
130 TGCT-ACACAAACCTCGGTCCAGTCTGAT
* * * *
14392357 CTTAGACTGGGAATTAACTCCGTATGCCTAAGCCAACCGATGAAACGAACG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACG
14392408 AGAGGACGGG
Statistics
Matches: 181, Mismatches: 27, Indels: 2
0.86 0.13 0.01
Matches are distributed among these distances:
157 65 0.36
158 49 0.27
159 67 0.37
ACGTcount: A:0.22, C:0.28, G:0.28, T:0.22
Consensus pattern (157 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCGCTCAAC
CGGCCAGAGGGCAGGATGCGCAAGCTGAGGATCAGTCGGGTCCCCCTCTACGTGCTGCCGATCCT
GCTACACAAACCTCGGTCCAGTCTGAT
Found at i:14393045 original size:26 final size:26
Alignment explanation
Indices: 14393007--14393059 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14392997 CTGGTCTGAT
*
14393007 CTTAGACTAGGAATGAACTCGGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14393033 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14393059 C
1 C
14393060 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14393938 original size:26 final size:26
Alignment explanation
Indices: 14393909--14393961 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14393899 CTGGTCCGAT
* *
14393909 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
*
14393935 CTTAGACTGGGAACGAACTCTGTATG
1 CTTAGACTGGGAACGAACTCCGTATG
14393961 C
1 C
14393962 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATG
Found at i:14394687 original size:898 final size:896
Alignment explanation
Indices: 14392594--14395307 Score: 3793
Period size: 898 Copynumber: 3.0 Consensus size: 896
14392584 AGACAACTTG
*
14392594 TTTTGGCCCCAATCTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC
*
14392659 TAGAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTT
* * * *
14392724 AGTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTTTCGAGG
131 AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* *
14392789 TTTGATGAGGGATAGGGCGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
14392854 ACACCCCCCGGCCCCCTCGATCGCTGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGTGATGCTC
261 ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTC
** * * *
14392919 CGGTGCTGGTGCCCCGACGAAGAAAAATGCGGCACCGGCACATGCCCGAGCCCAGCATGTGCTAC
326 CGACGATGGTGCCCC-ACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTAC
* * *
14392984 CGTAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCGGTATGCTTAGACTGGGAATGA
390 CGTAACCCTC-GTCTGGTCAGATCTTAGA-T-GGAATGAACTCCGTATGCTTAGACTGGGAACGA
* * * * *
14393049 ACTCCGTATGCCTAAGTCAACCCACGAAACAAGTGTGCGGGCGCTCAGCCGGCTAAAGGGGCAGG
452 ACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGG
* * * ** ** * * * *
14393114 ATGCACTAGTCGGGGATCGACCGGGTTTCCCTCAACGTGCTGCAGATCCTGCTACCGTAACCCTT
517 ATGCACAAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTGCCGCAACCCTT
* * * * * *
14393179 TGTCCAGTCTGACCTTAGACTGGGAATAAACTTCGTATGCCTAAGCCAACCGACGGAACGAGCTG
582 AGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCTG
* *
14393244 GCAGGCGGTCAGGCGAGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGG
647 GCGGGCGG--A-GCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGG
*
14393309 GTGGTAGGTGGGTTCAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAA
709 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAA
* *
14393374 ATTCATACGATGGTCCCTTAAGCCTTCACGTGAAGTTCCATGGCAAGACGACTCGTTTTCTATTT
774 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * * * *
14393439 TTCATAATTTTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAAGAG
839 TTCATGATTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAAGAT
* * * *
14393497 TTTTGGCCCCAAACTTGGTAGACGTGATCCCTGAATTTTTGTTGGCATGGACAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC
* * * *
14393562 TAAAAACTCAAACTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTT
* * *
14393627 AATGGGTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTACGGGGGTGTGAGTTCTCGAAG
131 AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
14393692 TGTGATGATGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGTGCGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * * **
14393757 AC-CCCCCCGGCCCCTCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTGC-ACGACGATGCT
261 ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT-CTCCGGTGATGCT
14393820 CCGACGATGGTGCCTCCACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTA
325 CCGACGATGGTGCC-CCACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTA
*
14393885 CCGTAACCCTCGATCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAACG
389 CCGTAACCCTCG-TCTGGTCAGATCTTAGA-T-GGAATGAACTCCGTATGCTTAGACTGGGAACG
* * * * *
14393950 AACTCTGTATGCCTAAGTCAACCCGCGAAACGAGCATACGGGCGCTCAGCTGACCAGAGGGGCAG
451 AACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAG
14394015 GATGCACAAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTGCCGCAACCCT
516 GATGCACAAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTGCCGCAACCCT
* * * * *
14394080 CAATCCGGTCTGATCTTAGA-TAGGAATGAACTCCGTATGCCTAAGCCAACCAATGAAAC-AGGC
581 TAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGA-GC
* * * *
14394143 GGGCGGGCGGA-CGGGCACTACGCCGGCCTGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
645 TGGCGGGCGGAGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGG
**
14394207 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
710 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAA
* *
14394272 ATCATACAATGGTCCCTTGAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
775 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * *
14394337 TCATGATTTTTGAAACCTTTTGCGGTTCCAGATTTTTTTGAAATTTTTTCGGAAGGAT
840 TCATGATTTTTAAAACTTTTTGCGGTTCGAGA-TTTTTTAAAATTTTTTCGGAAAGAT
* * *
14394395 TTTTGGCCCCAAACCTGGTAGACGTGATCTTTGTATTTTTTTTGGCATGCATAAAAAAATTCAGC
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC
14394460 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTT
66 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTT
* *
14394525 AATGGTTACTGGTAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
131 AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
14394590 TTTGATGAGGGATAGGGGGCCAATA-AAGGGCCAAGTACCAGCACCCATCGCATATCATGTGCGC
196 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
14394654 ACACCCCCCGGCCCCCCCGATCACCGAAACCCCAATGTCGCCGGTCAGGTTCTCCGGTGATGCTC
261 ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTC
* * * * *
14394719 CGACGATGGTGCCCCAGTGAAGAAAAATACGGCACCAGGACATGCCTGAGCACAACATGTGCTAC
326 CGACGATGGTGCCCCA-CGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTAC
*
14394784 TGTAA--C-C--CT--T-AG-TC-----T---A-G---TCCG-AT-CTTAGACTGGGAAAC-AAC
390 CGTAACCCTCGTCTGGTCAGATCTTAGATGGAATGAACTCCGTATGCTTAGACTGGG-AACGAAC
* * * *
14394825 T-TCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGA
454 TCT-GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGA
* * * * *
14394889 TGCGCAAGCCAGGGATCGATCGGGTCCCCCTTTGCGTGCT-ATCGATCCTACTGTCGCAACCCTT
518 TGCACAAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATCCTACTGCCGCAACCCTT
**
14394953 AGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCTG
582 AGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCTG
* * * *
14395018 GCGGGC-GAGTGGGAACTACGTCGGCCAGAGAGACGGTATGCACAAGTCGTGGATCGATAGGGTG
647 GCGGGCGGAGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTG
* *
14395082 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAATTTTATGGCATGTAAATT
712 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATT
* * * *
14395147 CATACAATGATCCCTTAAGCCTTCCCGTGAAGTTTCTTGGCAAGAGGACTCGTTTTCTATTTTTC
777 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * *
14395212 ACGATTTTCAAAAATTTTTGTGGTTCGAGATTTTTTAAAATTTCTTCGAAAAGAT
842 ATGATTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAAGAT
* *
14395267 TTTTGGCCCTAAACTTCGTAGACGTGATCCTTGTATTTTTG
1 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
14395308 GCCCTAAACT
Statistics
Matches: 1613, Mismatches: 184, Indels: 59
0.87 0.10 0.03
Matches are distributed among these distances:
871 2 0.00
872 197 0.12
873 242 0.15
874 5 0.00
877 1 0.00
878 1 0.00
882 1 0.00
888 2 0.00
889 1 0.00
890 1 0.00
892 2 0.00
895 1 0.00
896 1 0.00
897 241 0.15
898 336 0.21
899 1 0.00
900 1 0.00
901 44 0.03
902 290 0.18
903 243 0.15
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAGACACTTT
AATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTC
CGACGATGGTGCCCCACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACC
GTAACCCTCGTCTGGTCAGATCTTAGATGGAATGAACTCCGTATGCTTAGACTGGGAACGAACTC
TGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGC
ACAAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTACTGCCGCAACCCTTAGTC
CAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCTGGCGG
GCGGAGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
TTTTTAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAAGAT
Found at i:14396396 original size:26 final size:26
Alignment explanation
Indices: 14396358--14396410 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14396348 CTGGTTCGAT
* *
14396358 CTTAGACTGGGAATGCACTCCCTATG
1 CTTAGACTAGGAATGAACTCCCTATG
14396384 CTTAGACTAGGAATGAACTCCCTATG
1 CTTAGACTAGGAATGAACTCCCTATG
14396410 C
1 C
14396411 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCCTATG
Found at i:14397180 original size:901 final size:898
Alignment explanation
Indices: 14395439--14397289 Score: 2546
Period size: 901 Copynumber: 2.1 Consensus size: 898
14395429 TGCTATCGCG
* * * *
14395439 ACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCTATTTGCTTAGACTGGGAATGAACTC
1 ACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTAGGAATGAACTC
*
14395504 CGTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGACGCTCAGTCAGCCAGAGGGGCAGGATGC
66 CCTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGACGCTCAGTCAGCCAGAGGGGCAGGATGC
* ** * * ** *
14395569 GCAAGTCGGGGATCGGCCAGTCCCTCTCTACATGCTACCGATCCTGTTGCCGTAACCCTCGATCC
131 GCAAGTCGAGGATCAACCAGTCCCCCTCTACATGCTACCAATCCTACTGCCGCAACCCTCGATCC
* * * ** * ** * *
14395634 GGTCTGATCTTAGACTGGGAATCAACTTCGTATGCCTAAGGTAACCGACGAAACAATTGGGCGGG
196 GGTCTAATCTTAGACTAGGAATCAACTCCGTATGCCTAAGCCAACCAACGAAACAAGCGAGCAGG
* * * * * *
14395699 CGGTCGGGCGTGCACTACGCTGGCCAGGGAGACGGGATACGCAAGCCGTGGATCGATAGAGTGGT
261 CGGGCGGGCGGGCACCACGCCGGCCAGAGAGACGAGATACGCAAGCCGTGGATCGATAGAGTGGT
* * * **
14395764 AGGTGGGTTCTGGCACATCTTTATATTGCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
326 AGGTGGGTTCTGGCACATCTTCATATTGCTACGTGACAACACCATTTTTATGGCTTGTAAATTCA
*
14395829 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCAC
391 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
* * * *
14395894 AATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAA
456 AATTTTCAAAACTTTTTACGATTCGAGATTTTTGAAAATTTTTTCGAAAGGAGTTTTGACCCCAA
* *
14395959 ACTTTGTAGAAATGATCCTTGTAGTTTTTTTGGCATGCATAAAAAATTCAGCTAAAAACTCGAAG
521 ACTTAGTAGAAATGATCCTTGTAGTTTTTTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAG
* *
14396024 TGTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
586 TGTACAAGATTTTGTGACCATTTGAAAAAAG-GTCCCCATTTCAGACACTTTAATGGCTACTGAC
* * *
14396089 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGAGGGAT
650 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAAGTTTGATGAGGGAT
*
14396154 AAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACAGATCATGTGCGCACACCCCCCGAAA
715 AAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGAAA
* * * ** * *
14396219 CCCCGATCGTCTAAACCCCAATGCCACCGGTCAGGTTCTCCAGTGATGCTTCGGTGATGGTGCCC
780 CCCCGATCATCGAAACCCCAATGCCACCGGTCAGGTTCCCCAGCAATGCTCCGATGATGGTG-CC
** * *
14396284 CAG-CGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAATATGTGCTGCTGCA
844 CAGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCC-AGATGTGCTGCCGCA
* * * *
14396339 ACCCTCGTTCTGGTTCGATCTTAGACTGGGAATGCACTCCCTATGCTTAGACTAGGAATGAACTC
1 ACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTAGGAATGAACTC
* *
14396404 CCTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GAGCGCTCAG-CTGGCCAGAGGGG-AGGGA
66 CCTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGA-CGCTCAGTC-AGCCAGAGGGGCA-GGA
* * * * * * *
14396466 TGCGTAATTCGAGGATCAACCGGATCCCCCTCTACGTGCTATCAATCCTACTGTCGCAACCTTCG
128 TGCGCAAGTCGAGGATCAACCAG-TCCCCCTCTACATGCTACCAATCCTACTGCCGCAACCCTCG
* * * * * *
14396531 GTTCGGTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAATCAATGAAACGAGCGAG
192 ATCCGGTCTAATCTTAGACTAGGAATCAACTCCGTATGCCTAAGCCAACCAACGAAACAAGCGAG
* * * * *
14396596 CATGCGGGCGGGCGGGTACCATGCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGG
257 CAGGCGGGCGGGCGGGCACCACGCCGGCCAGAGAGACGAGATACGCAAGCCGTGGATCGATAGAG
* *
14396661 TGGTAGGTGGGTT-TAGGCACATCTTCATATTTCTACGTGACAACATCATTTTTATGGCTTGTAA
322 TGGTAGGTGGGTTCT-GGCACATCTTCATATTGCTACGTGACAACACCATTTTTATGGCTTGTAA
14396725 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
386 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* ** * *
14396790 TTCACGATTTTCAAAACTTTTTGTGATTCGGGATTTTTGAAAATTTTTTCGGAAGGAGTTTTGAC
451 TTCACAATTTTCAAAACTTTTTACGATTCGAGATTTTTGAAAATTTTTTCGAAAGGAGTTTTGAC
** * *
14396855 CCCAAACTTAGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGGTAAAAAC
516 CCCAAACTTAGTAGAAATGATCCTTGTAGTTTTTTTGGCATGCA-AAAAAAATTCAGCTAAAAAC
* *
14396920 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAGAA-GTCCCCATTTTAGACACTTTAATGGCTA
580 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGGTCCCCATTTCAGACACTTTAATGGCTA
* *
14396984 CTGACAGCAAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAATTTTGATGA
645 CTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAAGTTTGATGA
* *
14397049 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCTTGTGCGCACACCCCC
710 GGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCC
* *** * **
14397114 TGGCCCCCTCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCCCC-GACAATGCTCCGATGAT
775 CGAAACCC-CGATCATCGAAACCCCAATGCCACCGGTCAGGTTCCCCAG-CAATGCTCCGATGAT
* * * * *
14397178 GGTGCCCTGACGAAGATAAATACGGCACTAGCACATGTCCGAGCCCAGATGTGCTGCCGTA
838 GGTGCCCAGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGATGTGCTGCCGCA
14397239 ACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTTAG
1 ACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCATATG-CTTAG
14397290 TCAACCCACG
Statistics
Matches: 827, Mismatches: 114, Indels: 19
0.86 0.12 0.02
Matches are distributed among these distances:
899 4 0.00
900 338 0.41
901 433 0.52
902 52 0.06
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (898 bp):
ACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTAGGAATGAACTC
CCTATGCCTAAGTCAACCCACAAAACGAGCGTGCAGACGCTCAGTCAGCCAGAGGGGCAGGATGC
GCAAGTCGAGGATCAACCAGTCCCCCTCTACATGCTACCAATCCTACTGCCGCAACCCTCGATCC
GGTCTAATCTTAGACTAGGAATCAACTCCGTATGCCTAAGCCAACCAACGAAACAAGCGAGCAGG
CGGGCGGGCGGGCACCACGCCGGCCAGAGAGACGAGATACGCAAGCCGTGGATCGATAGAGTGGT
AGGTGGGTTCTGGCACATCTTCATATTGCTACGTGACAACACCATTTTTATGGCTTGTAAATTCA
TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
AATTTTCAAAACTTTTTACGATTCGAGATTTTTGAAAATTTTTTCGAAAGGAGTTTTGACCCCAA
ACTTAGTAGAAATGATCCTTGTAGTTTTTTTGGCATGCAAAAAAAATTCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGACCATTTGAAAAAAGGTCCCCATTTCAGACACTTTAATGGCTACTGACA
GCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATA
AGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGAAAC
CCCGATCATCGAAACCCCAATGCCACCGGTCAGGTTCCCCAGCAATGCTCCGATGATGGTGCCCA
GACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGATGTGCTGCCGCA
Found at i:14399469 original size:900 final size:900
Alignment explanation
Indices: 14397318--14401317 Score: 5205
Period size: 898 Copynumber: 4.5 Consensus size: 900
14397308 GTGCATCCCA
* ** * * * * *
14397318 GGGATCGATCGGGTCCCCCTCTGTGTGTTGTCGATCCTGCTACCGCAACCCTCGATCCGGTCTGA
1 GGGATCGACCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTACCGCAACCCTCAATCTGGTCTGA
* * * * * * *
14397383 TCTTAGATTGGGAATGAACCCCGTATGCCTAAGCCAACTAACAAAACGAACGGGCGGGTGGGCAG
66 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGG
* * *
14397448 TCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTA
131 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* **
14397513 GGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGAATTGTAAATTCATACAATGGTCC
196 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * *
14397578 CTTCAGCCTTCACATGAAATTTCATGGCAAAACGACTCGTTTTCTCTTTTTCACTG-TTTTCAAA
261 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC-GATTTTC-AA
* * * * *
14397642 AATTTTTTACGATTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTAGCCCCAAACTTGGTAG
324 AACTTTTTATGATTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * * * *
14397707 ACGTGATCCTTCTATTTTTGTTGGCATGCATAAAAAAATTCACCAAAAAACTCGACGTGTACAAC
389 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
14397772 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGTAAACC
454 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCAAACC
* * *
14397837 TGA-AAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGACAGTGGGC
519 T-ATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTAATGAGGGATAGGGGGC
* * * *
14397900 CAATATAAGGGCCAAGTACCAGCACCCATTGAACATCATGTGCGCACA-CCCCCCGGCCCCCTCG
583 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCCCG
* * * *
14397964 ATTGCCAGAACCCCAATGCCGTCGGTCAGGTTCTTCGGCGA---T--GGC----G-G-CCCGACG
648 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCG
* ** * *
14398018 AGGAAAAAT-GTGACACCAGCACATGCCTGAGCCCAGCAAGTGCTGCCGCAACCCTCGGTCCGGT
713 AAGAAAAATACAG-CACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGT
** *
14398082 CTGATCTTAGACTGGGAATGAACTCTGTACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
777 CTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * *
14398147 AACCCACGAAACGAGCATGAGGGCGTTCAGCCGACCAGAGGGGCGGGATGCACAAGTCG
842 AACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATGCACAAGCCG
* * * * **
14398206 GGGATCGACCGGGTCACCCTCTACGTGCTGCCAATCTTGCTGCTGCAACCCTCGGTCTGGTCTGA
1 GGGATCGACCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTACCGCAACCCTCAATCTGGTCTGA
* * **
14398271 TCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCAACGAAACGA----GCGGGCGGGCGG
66 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGG
* * * * * *
14398332 GCACTATGCTGGCCAGAGAGTCGGGATGCGCAAGCCGTGGATTGATAGGGTCGTATGTGGGTTTA
131 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
14398397 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
196 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* *
14398462 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAA
261 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* * * *
14398527 CTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
326 CTTTTTATGATTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* ** *
14398592 GTGATGCTTGTATTTTTGCCGGCATGCACATAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
391 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* *
14398657 TTTGTAACCATTTGAAAAAAGTGTCCCCATTACAGACACTTTAATGGCTACTGGAAGCAAACCTA
456 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCAAACCTA
*
14398722 TAAAATCTCAAATGCT-TTTAAGGAGGTGTGAGTTCTCAAGGTTTAATGAGGGATAGGGGGCCAA
521 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTAATGAGGGATAGGGGGCCAA
* * *
14398786 TATAAGGGCCAAGTACCAGCACCCGTCGCACATAATGTGCGCATACCCTCCCCAGCCCCCCCGAT
586 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCCAGCCCCCCCGAT
** * * * *
14398851 CGGTGGAACCCCAATGCCGTAGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCTCGGTGAA
650 CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAA
* * * **
14398916 GAAAAATACAGCACC-GACACATG-CTCGAGCCTAGCATGTACTGTCGCAAAGCTCGATCCGGTC
715 GAAAAATACAGCACCAG-CACATGCCT-GAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTC
* *
14398979 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCA
778 TGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* ***
14399044 ACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGTGAGATGTGTAAGCCG
843 ACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATGCACAAGCCG
** * * * * * * *
14399102 GGGATCGGTCGGGTCCCCATCTACGGGTTACCAATCCTGCTTCCACAACCCTCAATTTGGTCTGA
1 GGGATCGACCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTACCGCAACCCTCAATCTGGTCTGA
* * * * * * * *
14399167 TCTTAGACTGAGAATTAACTTCATATGCCTAAGCCAACTGATGAAATGACCGGGCGGGCGGGTGG
66 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGG
* * * * *
14399232 GCACTACGCCGACCAGAGAGACGAGATACGCAAGCCATGGATCGATAGGGTGTTAGGTGGGTTTA
131 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * * **
14399297 GGGACATTTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
196 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
14399362 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
261 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* * * *
14399427 CTTTTTGTGATTCGGGATTTTTGAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTAGTAGAC
326 CTTTTTATGATTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
14399492 GTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGAT
391 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
14399557 TTTGTGACCATTTGAAAGAA--GTCCCCATTTTAGACACTTTAATGGCTACT-GACAGCAAACTT
456 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGA-AGCAAACCT
* * *
14399619 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAA-TTTTGATGAGGGATAGGGGGCC
520 ATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-AAGGTTTAATGAGGGATAGGGGGCC
* * *
14399683 AATATAAGGGCCAAGTACCAGCACCCATCACAGATCATGTGCGCACACCCCCCCGAAG--CCCCT
584 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC--AGCCCCCCC
** * * * * * *
14399746 GATCGTTGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGTGATGCTCCAGTGATGGTGCCCCAGC
647 GATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGC
* * * * * * *
14399811 GAAGAAAAATACGGCACCGGCACATACCCGAGCCCCA-TATGTGCTGCTGCAACCCTCGGTCCGG
712 GAAGAAAAATACAGCACCAGCACATGCCTGAG-CCCAGCATGTGCTGCCGCAACCCTCGATCCGG
* *
14399875 TCTGATCTTAGACTGGGAATGAACTCCCTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGT
776 TCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
14399940 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATCCACAAGCCA
841 CAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATGCACAAGCCG
* * * * * *
14400000 GGGATCGACCGGGTCCCCCTCTGCGTGCTGTCAATCCTACTATCGCAACCTTCAATTTGGTCTGA
1 GGGATCGACCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTACCGCAACCCTCAATCTGGTCTGA
* * * * * * *
14400065 TCTTAGACTAGGAACGAACTCCGTATGCCTAAG-CAAATCGACAAAACGAGCGGACGGGAGGGCA
66 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACT-GACGAAACGAGCGGGCGGGCGGGCG
* * *
14400129 GGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTT
130 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
** * ** *
14400194 AGGCACATCTTCATATTTCTGCATGCCAACACCATTTTTATGGCTTGTAAATTCAAACAATCATA
195 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
14400259 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCACGATTTTTAAA
260 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAA
* * *
14400324 AC-TTTT-TGCATTTCGGGATTTTTTAAAATTTTTTCGGAAAGAGCTTTGACCCCAAACTTGGTA
325 ACTTTTTATG-A-TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * *
14400387 GTCGTGAT-CTTCGTATTTTTTTTTGGCATGCAGAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
388 GACGTGATCCTT-GTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* *
14400451 AAGATTTTGTGACCATTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCA
451 AAGATTTTGTGACCA-TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCA
* *
14400516 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGGGATAGGG
515 AACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTAATGAGGGATAGGG
* * *
14400581 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCAGACCCCCCCGGCCCCC
580 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCC
* * * * * *
14400646 CCGATCACCGGAACCCCAATACCGTCGGTCA-GTTCTCCGACGATGCTTCGACGATGCTGCCCCG
645 CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCG
* *
14400710 GTGAAGAAAAATATAGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTC-AGTCC
710 GCGAAGAAAAATACAGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGA-TCC
*
14400774 GGTTTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
774 GGTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * * * ** *
14400839 GTCAACCCATAAAACGAGCGTGTGAGCGCTAAGCCGGCCAGAGGGGTGGGATGTGCAAGCTG
839 GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATGCACAAGCCG
* * * * * * *
14400901 AGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCTTACTACCGTAACCCTCAGTCTGGTCTGA
1 GGGATCGACCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTACCGCAACCCTCAATCTGGTCTGA
* *
14400966 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGG
66 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGG
** *
14401031 TTACTACGCCGGCCATAGAGAC-GGATGCGCAAGCCGTGGGATCGATAGGGTGGTAGGTGGGTTT
131 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT-GGATCGATAGGGTGGTAGGTGGGTTT
*
14401095 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACATTGGTC
195 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * * **
14401160 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACACATTTTCTATTTTTCATGATTTTGGAA
260 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAA
* ** * *
14401225 ACTTTTTATGGTTCAAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTTGTAGA
325 ACTTTTTATGATTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
** *
14401290 AATGATCCTTGTATGTTT-TTGGCATGCA
390 CGTGATCCTTGTATTTTTGTTGGCATGCA
14401318 TAAGGGCCAA
Statistics
Matches: 2702, Mismatches: 360, Indels: 89
0.86 0.11 0.03
Matches are distributed among these distances:
882 6 0.00
883 270 0.10
884 186 0.07
885 46 0.02
888 97 0.04
890 3 0.00
894 1 0.00
895 4 0.00
896 254 0.09
897 15 0.01
898 606 0.22
899 160 0.06
900 358 0.13
901 510 0.19
902 183 0.07
903 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (900 bp):
GGGATCGACCGGGTCCCCCTCTACGTGCTGCCAATCCTGCTACCGCAACCCTCAATCTGGTCTGA
TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCGG
GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
CTTTTTATGATTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGAAGCAAACCTA
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTAATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGCCCCCCCGATC
GCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAG
AAAAATACAGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCTGA
TCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
CACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATGCACAAGCCG
Found at i:14399919 original size:26 final size:26
Alignment explanation
Indices: 14399881--14399933 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14399871 CCGGTCTGAT
*
14399881 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTAGGAATGAACTCCCTATG
*
14399907 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCCTATG
14399933 C
1 C
14399934 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCCTATG
Found at i:14400818 original size:26 final size:26
Alignment explanation
Indices: 14400782--14400834 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14400772 CCGGTTTGAT
14400782 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14400808 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14400834 C
1 C
14400835 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14401744 original size:446 final size:442
Alignment explanation
Indices: 14400914--14401764 Score: 1181
Period size: 446 Copynumber: 1.9 Consensus size: 442
14400904 ATCGACCGGG
* * * ** ** *
14400914 TCCCCCTCTGCGTGCTGCCGATCTTACTACCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGA
1 TCCCCCTCTGCATGCTACCGATCCTACTACCACAACCCTCAGTCCAGTCCGATCTTAGACTGGGA
**
14400979 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGTTACTACGCCGGC
66 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGC
* *
14401044 CATAGAGACGGATGCGCAAGCCGTGGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
131 CAGAGAGACGAATGCGCAAGCCGTGGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* *
14401109 ATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACATTGGTCCCTTAAGCCTTCAT
196 ATTTCTG-ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* * * * *
14401174 GTGAAGTTTCATGGCAAGACGACACATTTTCTATTTTTCATGATTTTGGAAACTTTTTATGGTTC
260 CTGAAGTTTCATGGCAAGACGACACATTTTCTAGTTTTCATGATTTTGAAAACTTTTCACGGTTC
* * *
14401239 AAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTTGTAGAAATGATCCTTGTAT
325 AAGATTTTTTAAAAGTTTTTCGAAAGGAGATTTGGCCCCAAACTTGGTAGAAATGATCCTTGTAT
14401304 GTTT-TTGGCATGCATAAGGGCCAAGTACCTGTAAAACCAGGTATCGGTCGGA
390 GTTTGTTGGCATGCATAAGGGCCAAGTACCTGTAAAACCAGGTATCGGTCGGA
*
14401356 TCCCCCTCTGCATGCTACCGATCCTGCTACCACAACCCTC-GATCCAGTCCGATCTTAGACTGGG
1 TCCCCCTCTGCATGCTACCGATCCTACTACCACAACCCTCAG-TCCAGTCCGATCTTAGACTGGG
* * * *
14401420 AATTAACTCTGTATGCCTAAGCTAACCGATGAAACGAGCGGCCAGGCGGGCGGGCGGGCACTACG
65 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG--A--CGGGCGGGCGGGCACTACG
* * * *
14401485 CCGGCTAGAGAGACGAAATGCGCAAGCCGT-GGCTTGATAGGGTGGTAGGTGGGTTTAGGGACAT
126 CCGGCCAGAGAGACG-AATGCGCAAGCCGTGGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
*
14401549 CTTCATATTTTTCTG-TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAG
190 CTTCATA--TTTCTGATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* * * *
14401613 CCTTCACCTGAGGTTTCATTGCAAGACGACTCATTTTCTAGTTTTCATGATTTTTAAAACTTTTC
253 CCTTCACCTGAAGTTTCATGGCAAGACGACACATTTTCTAGTTTTCATGATTTTGAAAACTTTTC
** * * * **
14401678 ACGGTTCGGGATTTTTTAAAAGTTTTTC-AGAGGGAGATTTGTCCCCAATCTTGGTAGACGTGAT
318 ACGGTTCAAGATTTTTTAAAAGTTTTTCGA-AAGGAGATTTGGCCCCAAACTTGGTAGAAATGAT
*
14401742 CCTTGTATTTTTGTTGGCATGCA
382 CCTTGTATGTTTGTTGGCATGCA
14401765 AAAAAAAATT
Statistics
Matches: 355, Mismatches: 44, Indels: 15
0.86 0.11 0.04
Matches are distributed among these distances:
441 1 0.00
442 90 0.25
444 1 0.00
445 1 0.00
446 233 0.66
447 23 0.06
448 6 0.02
ACGTcount: A:0.23, C:0.22, G:0.24, T:0.31
Consensus pattern (442 bp):
TCCCCCTCTGCATGCTACCGATCCTACTACCACAACCCTCAGTCCAGTCCGATCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTACGCCGGC
CAGAGAGACGAATGCGCAAGCCGTGGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
ATTTCTGATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACC
TGAAGTTTCATGGCAAGACGACACATTTTCTAGTTTTCATGATTTTGAAAACTTTTCACGGTTCA
AGATTTTTTAAAAGTTTTTCGAAAGGAGATTTGGCCCCAAACTTGGTAGAAATGATCCTTGTATG
TTTGTTGGCATGCATAAGGGCCAAGTACCTGTAAAACCAGGTATCGGTCGGA
Found at i:14403605 original size:27 final size:24
Alignment explanation
Indices: 14403575--14403631 Score: 60
Period size: 24 Copynumber: 2.2 Consensus size: 24
14403565 TTTTTCACTA
*
14403575 TTTTCAAAACTTTTTACGGTTTAGGAT
1 TTTTCAAAA-TTTTTACGG--AAGGAT
* *
14403602 TTTTTAAAATTTTTTCGGAAGGAT
1 TTTTCAAAATTTTTACGGAAGGAT
14403626 TTTTCA
1 TTTTCA
14403632 CCGCAAACTT
Statistics
Matches: 26, Mismatches: 4, Indels: 3
0.79 0.12 0.09
Matches are distributed among these distances:
24 10 0.38
26 8 0.31
27 8 0.31
ACGTcount: A:0.26, C:0.09, G:0.14, T:0.51
Consensus pattern (24 bp):
TTTTCAAAATTTTTACGGAAGGAT
Found at i:14403665 original size:342 final size:342
Alignment explanation
Indices: 14403037--14403691 Score: 933
Period size: 342 Copynumber: 1.9 Consensus size: 342
14403027 ACGAATGGAC
*
14403037 GGGCGGGCGGGCACTACGCCGACCAGAGAAACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
1 GGGCGGGCGGGCACTACGCCGACCAGAGAAACAGGATGCGCAAGCCGTGGATCGATAGGGTGCTA
* *
14403102 GGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
66 GGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCAGTTTTATGACTTGTAAATTCAT
* * *
14403167 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATG
131 ACAATGGCCCCTTAAGCCTTCACGTGAAGTCTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
** * * **
14403232 ATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATATTTTCGAAAGGGGTTTTGGCCCCAAA
196 ATTTTCAAAACTTTTTACGGTTAGAGATTTTTTAAAATATTTTCGAAAGGAGTTTTCACCCCAAA
* *
14403297 CTTGGTAGACATGATCCATATATTTTTGTTGCCATGCACTAAAAAATTCAGCTAAGCCAACCGAC
261 CTTGGTAGACATGATCCATATATTTTTGTTGCCATGCACAAAAAAATTAAGCTAAGCCAACCGAC
14403362 GAAACGAGCGGGCGAGT
326 GAAACGAGCGGGCGAGT
* * * *
14403379 GGGCGGGCGGGCACTATGTCCG-CCAGAGGGAA-GGGATGCGCAAGTCGTGGATCGATAGGGTGC
1 GGGCGGGCGGGCACTACG-CCGACCAGA-GAAACAGGATGCGCAAGCCGTGGATCGATAGGGTGC
* *
14403442 TAGGTGGGTTTAGGTACATCTTCATATTTCTGCT-TGCCAATGCCAGTTTTATGACTTGTAAATT
64 TAGGTGGGTTTAGGCACATCTTCATATTTCT-ATGTGCCAATGCCAGTTTTATGACTTGTAAATT
** *
14403506 CATACAATGGCCCCTTAAGCCTTCATTTGAAGTCTCATGGCAAGACGACTTGTTTTCTATTTTTC
128 CATACAATGGCCCCTTAAGCCTTCACGTGAAGTCTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
14403571 ACT-ATTTTCAAAACTTTTTACGGTTTAG-GATTTTTTAAAATTTTTTCGGAAGGATTTTTCACC
193 A-TGATTTTCAAAACTTTTTACGG-TTAGAGATTTTTTAAAATATTTTCGAAAGGAGTTTTCACC
* ** ** * *
14403634 GCAAACTTGGTAGATGTGATCGTTGTATTTTTGTTGGCATGCACAAAAAAATTAAGCT
256 CCAAACTTGGTAGACATGATCCATATATTTTTGTTGCCATGCACAAAAAAATTAAGCT
14403692 CAAAACTCAA
Statistics
Matches: 275, Mismatches: 33, Indels: 10
0.86 0.10 0.03
Matches are distributed among these distances:
342 264 0.96
343 11 0.04
ACGTcount: A:0.25, C:0.18, G:0.24, T:0.33
Consensus pattern (342 bp):
GGGCGGGCGGGCACTACGCCGACCAGAGAAACAGGATGCGCAAGCCGTGGATCGATAGGGTGCTA
GGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCAGTTTTATGACTTGTAAATTCAT
ACAATGGCCCCTTAAGCCTTCACGTGAAGTCTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
ATTTTCAAAACTTTTTACGGTTAGAGATTTTTTAAAATATTTTCGAAAGGAGTTTTCACCCCAAA
CTTGGTAGACATGATCCATATATTTTTGTTGCCATGCACAAAAAAATTAAGCTAAGCCAACCGAC
GAAACGAGCGGGCGAGT
Found at i:14404986 original size:26 final size:26
Alignment explanation
Indices: 14404950--14405002 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14404940 CCAATCCGAT
*
14404950 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14404976 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14405002 C
1 C
14405003 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14405881 original size:26 final size:26
Alignment explanation
Indices: 14405852--14405903 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
14405842 CCGGTCTGAT
*
14405852 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14405878 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14405904 TGTAAGTGAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14406251 original size:889 final size:890
Alignment explanation
Indices: 14403384--14408142 Score: 5632
Period size: 899 Copynumber: 5.3 Consensus size: 890
14403374 CGAGTGGGCG
* * * * *
14403384 GGCGGGCACTATGTCC-GCCAGAGGGAAGGGATGCGCAAGTCGTGGATCGATAGGGTGCTAGGTG
1 GGCGGGCACTACG-CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * *
14403448 GGTTTAGGTACATCTTCATATTTCTGCTTGCCAATGCCAGTTTTATGACTTGTAAATTCATACAA
65 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* ** * * *
14403513 TGGCCCCTTAAGCCTTCATTTGAAGTCTCATGGCAAGACGACTTGTTTTCTATTTTTCACTATTT
130 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * * *
14403578 TCAAAACTTTTTACGGTTTAGGATTTTTTAAAATTTTTTCGGAAGGATTTTTCACCGCAAACTTG
195 TTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTG
* * * * *
14403643 GTAGATGTGATCGTTGTATTTTTGTTGGCATGCACAAAAAAATTAAGCTCAAAACTCAAAGTGTA
260 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
*
14403708 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCA
325 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
14403773 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGG
390 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
14403838 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTCGGCCCCCC
455 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCC
* * * * * ** * * * *
14403903 CAATCGCCAGATCCCCAATACCACCGGTCAGG-TTCTCCAGCGATGCTCTGGCGATGGTGCCCCG
520 CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTCGA-CGATGCTCCGACGATGGTGCCCCG
* * * *
14403967 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCCTCGGTCCA
584 ACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-GCGCAACCCTCGGTCCG
*
14404032 GTCTGATCTTAGACTGTGAATGAACTCCGTATGCTTCGACTGGAAATGAACTCCGTATGCCTAAG
648 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTT-GACTGG-AATGAACTCCGTATGCCTAAG
* ** * * * *
14404097 TCAACCCATGAAACGAGTATACGGGTGCTCAACCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGA
711 TCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
** * * ** * * * ** *
14404162 TCGGTCGGGTCCCCCTCTGCGTGCTGCTGATTCTGTTGCCACAACCCTCGGTCCTATCCAATCCT
775 TCGGTCGGGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACCCTCGGTCCTGTCTGATCTT
* * *
14404227 AGACTAGGAATGTACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGTA
840 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-AAGCGAGC-GG-C
* *
14404283 GGCGGGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTCGATCGATAGGGTGGTAGGTGG
1 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
14404348 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAAT
66 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * * *
14404413 GGTCCCTTAAGCCTTCACGTGAGGTTTCCTGGCAAGACGACTCATTTTTTATTTTTCATGATTTT
131 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
** * * * * *
14404478 TGGAACTTTTTACGGTTCGGGATTTTTTACAATTTTTTCGGAAGGAGTTTCGGCCCCAAACTAGG
196 TAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGG
* * * *
14404543 TAGACGTGATCCTTGTATTTTTGTTGGTATGCACAAAAAAATTAAGCTAAAAACTTGAGGTGTAC
261 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
14404608 AAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
326 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
14404673 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGG
391 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
14404738 GCCAATATAAGGGCGAAGTACCAGCACCCATCGCACATCATGTTCGCACACACCCCCGGCCCCCC
456 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCCGCCCCCC
* * * * *
14404803 TGATC-TCCGGAACGCCAATGCCATCGATCAGGTTCTTCGGCGATGCTCCGACGATGCTCCGGCG
520 CGATCGT-CGGAACCCCAATGCCGTCGGTCAGG-T-TT------T--T-CGACGATGCTCCGACG
* **
14404867 ATGGTGCCCCGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAA
573 ATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CGCAA
* ** * *
14404932 CCCTGGGTCCAATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCC
637 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTT-GACT-GGAATGAACTCC
* * * * *
14404997 GTATGCCTAAGTCAACCCACGAAATGAGCGTGCGAGCGCTCAACCGGCCAGAGAGGTGGGATGCA
700 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCG-GCGCTCAGCCGGCCAGAGGGGCGGGATGCG
** * * * * * * *
14405062 CAAGCCGGGGATCGACCGTGTCCCCCTCTATGTGCTACCGATGCTGCTGCTGCAACCCTCTGT-C
764 CAAGCCGGGGATCGGTCGGGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACCCTCGGTCC
** * *
14405126 TGGTCCAATCTTAGACTAGAAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCGG
829 T-GTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A----GCGA
14405191 GCGGGC
886 GC-GGC
* * * *
14405197 GGACGGGCACTACACCGACTAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
1 GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
14405262 GGTTTAGGCACATCTTTATATTTCTACATGCCAATGCCATTTTTATGGCTTGT-AATATCATACA
65 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAAT-TCATACA
*** *
14405326 ATGGTCCCTTAAATTTTCACTTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
129 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
14405391 TTTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTCTTTCGGAAGGAGTTTTGGCCCCAAACTT
194 TTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTT
** *
14405456 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-TTAAAAATTCAGCTAAAAACTCGAAGTCT
259 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* *
14405520 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTCAAACACTTTAATGGCTACTGGCAGC
324 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
14405585 AAACCTGTAAAATCTCAAATGGTCTTTAGGGGGGTGTGAGTTCTCGAGGTTTAATGAGGGATAGG
389 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* *
14405650 GGGCCAATATAAGGGCCAAGTCCCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCC
454 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCC
* * * * *
14405715 CCGATCATCGGAACGCCAATGCTGTCGGTCAGGTTTTTCGACGATTCTCCGATGATGGTGCCCCG
519 CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTCGACGATGCTCCGACGATGGTGCCCCG
** * *
14405780 ACGAAGAAAAATACGGCACCAGCACATGTTCGATCCCAGCATGTGCTGTCACAACCCTCGGTCCG
584 ACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CGCAACCCTCGGTCCG
* * **
14405845 GTCTGATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGTGTAAG
648 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTT-GACT-GGAATGAACTCCGTATGCCTAAG
* * * *
14405910 TGAACCCACGAAACGAGCGTGCGGTGCTCAGCCGACCAGAGGGGTGGGATGCGCAAGCCGGGGAT
711 TCAACCCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
* * ** * * * *
14405975 CGGTCAGGTGCCCCTCTGCGTGATGTCGATCCTACTATCC-CAACCCTCGATCCTGTCTGATTTT
776 CGGTCGGGTCCCCCTCTATGTGCTGCCGATCCTACTA-CCGCAACCCTCGGTCCTGTCTGATCTT
*
14406039 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAA-CGAGC-G-
840 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAGCGAGCGGC
* * *
14406087 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAAGTTGGTAGGTGG
1 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
*
14406152 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
66 GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * **
14406217 GGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTTTATTTTTCATAATTTT
131 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* ** * * * **
14406282 TTATCCTTTTTGCGGTTCAGGATTTTTTAAAATTCTTTCGAAAGGAGTTTT-ACCCCAAACTTCA
196 TAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGG
* * * * *
14406346 TAGACGTGATCCTTATATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAAGTTGAATTGTAC
261 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
14406411 AAGATTTTGTGACCATTAGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCTGCAA
326 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
14406476 ACTTATAAAATCTCAAATGGTTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGCG
391 ACCTGTAAAATCTCAAAT-GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
14406541 GGCCGATATAAGGGCCAAGTACCAGCACCCATCGCACGTCATGTGCGCACA-CCCCCAG-CCCCC
455 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCC
* * * *
14406604 CGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGGCGATGCTCCGACGATGGTG-CCC--
520 CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTCGACGATGCTCCGACGATGGTGCCCCGA
* *
14406666 TG--G-----T---G-A--AG-A-A------A----A--A--TGC-G-GCAACCCTCGGTTCGGT
585 CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGCAACCCTCGGTCCGGT
*
14406700 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTGACTGGGAATGAACTCCGTATGCCAAAGTCA
650 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTGACT-GGAATGAACTCCGTATGCCTAAGTCA
* ** ** * *
14406765 AGCCACGAAACGAGCGTGCGG-GCATTCAGCATGCTGGAGGGGCGGGATGCGTAAGCCGAGGATC
714 ACCCACGAAACGAGCGTGCGGCGC--TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* *
14406829 -GACTGGGTCCCCCTCTATGTGCTGTCGATCCTACTACCGCAACCCTCGGT-CTGATCTGATCTT
777 GGTC-GGGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACCCTCGGTCCTG-TCTGATCTT
* *
14406892 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAACGAGCGTACGGGCGGGC
840 AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--AGCG-A---GC-GGC
* *
14406951 TGGCGGGCAGGCACTACGTCGGCC-GAAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGT
1 -GGC--G--GGCACTACGCCGGCCAG-AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
14407015 AGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
60 AGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * * *
14407080 TACAATGGTCCCTTAAGCCTTCACATGAAGTTTCAAGGCAAGACGACTCCTTTTCTATTTTTTAC
125 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
* ** * * *
14407145 GAATTTGCAAACTTTTTGCGGTTCAGGATTTTTGAAAATTTTTTTC-GAAGGATTTTTGACCCCA
190 GATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGACCCCA
*
14407209 AACTTGGTAGACGTGATCCTTGTATTTTTGGTGGCATGCACAAAAAAATTCAGCTAAAAACTC-A
254 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
*
14407273 TAGTGTAGAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
319 -AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
14407338 GGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGG
383 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * *
14407403 GATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCGTGTGCACACACCCCCCC
448 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC
* * * * *
14407468 GGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAGG-TTCTCTGGCGATGCTCCGATGATG
513 -GCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTC-GACGATGCTCCGACGATG
* * * *
14407532 GTGCCCTGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGTATGTGCTGC-CGTACCC
576 GTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGC-AACCC
*
14407596 TCGGTCCGGTCT-A----A-TCT-----T--A----G-A--C-TG---GGAATGAACTCCGTATG
640 TCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTGACTGGAATGAACTCCGTATG
* * * * *
14407637 CCTAAGTCAACCCACAAAATGAGCATGCGGGCGCTTAGTCGGCCAGAGGGGCGGGATGCGCAAGC
705 CCTAAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* * * * * * *
14407702 TGGGGATCGTTCGGGTCCCCCTCTATGTGCTACCGATCTTGCTACCGTAACCCTTGGTCC-GATC
769 CGGGGATCGGTCGGGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACCCTCGGTCCTG-TC
* * *
14407766 TGATCTTAGACT-GTGAATGAACTCCATATGCCTAAGCCAACCAATGAAATGAGTGGACGAGCGG
833 TGATCTTAGACTAG-GAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A---G-CGAGC-G
14407830 GC
889 GC
* * *
14407832 GGGCGGGCACTACGCCAGCCAGAGAAACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTG
1 -GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
14407897 GGTTTAGCCACATCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
65 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
14407962 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACAATTT
130 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * * *
14408027 TTCAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTTTTGAAAGGGGTTTTGGCCCCAAACTT
195 TTAAAACTTTTTACGGTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTT
* * * * * * *
14408091 GGTAGACATGATCCGTATATTTTTATTGCCATGCGCTAAAAAATTCAGCTAA
259 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA
14408143 GCCAACTAAC
Statistics
Matches: 3354, Mismatches: 397, Indels: 240
0.84 0.10 0.06
Matches are distributed among these distances:
851 2 0.00
852 53 0.02
853 160 0.05
854 2 0.00
855 1 0.00
856 4 0.00
857 2 0.00
858 2 0.00
860 1 0.00
861 2 0.00
863 1 0.00
864 1 0.00
865 3 0.00
867 1 0.00
868 1 0.00
869 299 0.09
870 157 0.05
871 4 0.00
872 56 0.02
873 2 0.00
874 1 0.00
875 2 0.00
876 7 0.00
877 266 0.08
878 2 0.00
879 1 0.00
880 1 0.00
881 169 0.05
882 5 0.00
883 3 0.00
884 2 0.00
885 6 0.00
886 2 0.00
887 3 0.00
888 99 0.03
889 325 0.10
890 96 0.03
891 1 0.00
893 5 0.00
895 1 0.00
896 1 0.00
898 3 0.00
899 455 0.14
900 39 0.01
901 115 0.03
902 162 0.05
903 3 0.00
904 3 0.00
905 4 0.00
906 15 0.00
909 1 0.00
910 5 0.00
911 281 0.08
912 5 0.00
913 37 0.01
914 202 0.06
915 272 0.08
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.27
Consensus pattern (890 bp):
GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
TAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGG
TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGCCCCCCC
GATCGTCGGAACCCCAATGCCGTCGGTCAGGTTTTTCGACGATGCTCCGACGATGGTGCCCCGAC
GAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCGCAACCCTCGGTCCGGTC
TGATCTTAGACTGGGAATGAACTCCGTATGCTTGACTGGAATGAACTCCGTATGCCTAAGTCAAC
CCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC
GGGTCCCCCTCTATGTGCTGCCGATCCTACTACCGCAACCCTCGGTCCTGTCTGATCTTAGACTA
GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAGCGAGCGGC
Found at i:14406743 original size:25 final size:25
Alignment explanation
Indices: 14406709--14406756 Score: 96
Period size: 25 Copynumber: 1.9 Consensus size: 25
14406699 TCTGATCTTA
14406709 GACTGGGAATGAACTCCGTATGCTT
1 GACTGGGAATGAACTCCGTATGCTT
14406734 GACTGGGAATGAACTCCGTATGC
1 GACTGGGAATGAACTCCGTATGC
14406757 CAAAGTCAAG
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.25, C:0.21, G:0.29, T:0.25
Consensus pattern (25 bp):
GACTGGGAATGAACTCCGTATGCTT
Found at i:14407125 original size:869 final size:864
Alignment explanation
Indices: 14405831--14408142 Score: 2926
Period size: 869 Copynumber: 2.7 Consensus size: 864
14405821 TGTGCTGTCA
* * *
14405831 CAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTAGGAATGAAC
1 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
** * *
14405896 TCCGTATGTGTAAGTGAACCCACGAAACGAGCGTGCGGTGC-TCAGCCGACCAGAGGGGTGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG-GCTTCAGCCG-CCAGAGGGGCGGGAT
* * * ** *
14405960 GCGCAAGCCGGGGATCGGTCAGGTGCCCCTCTGCGTGATGTCGATCCTACTATCC-CAACCCTCG
129 GCGCAAGCCGGGGATCGCTCGGGTCCCCCTCTATGTGCTGTCGATCCTACTA-CCGCAACCCTCG
* * * *
14406024 ATCCTG-TCTGATTTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATG-AA-ACG-A-
193 GT-CTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAAGACGTAG
* *
14406084 -GC-G-GGC--G-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAAGTT
257 GGCGGCGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGT
**
14406143 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
322 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAAT
* *
14406208 TCATACAATGGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTTTATTTTT
387 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTCTATTTTT
* * ** *
14406273 CATAATTTTTTATCCTTTTTGCGGTTCAGGATTTTTTAAAATTCTTTCGAAAGGAGTTTT-ACCC
452 CACAATTTTTCAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGACCC
** * *
14406337 CAAACTTCATAGACGTGATCCTTATATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAAGTT
517 CAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA-CT
* * *
14406402 GA-ATTGTACAAGATTTTGTGACCATTAGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTA
581 CATAGTGTACAAGATTTTGTGACCATTAGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * * *
14406466 CTGGCTGCAAACTTATAAAATCTCAAATGGTTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
646 CTGGCAGCAAACCTATAAAATCTCAAATGCTT-TTTAAGGGGGTGTGAGTTCTCGAGGTTTAATG
* * * *
14406531 AGGGATAGCGGGCCGATATAAGGGCCAAGTACCAGCACCCATCGCACGTCATGTGCGCACA-CCC
710 AGGGATAGCGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCACACACCCC
* *
14406595 CCAG-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGGCGATGCTCCGACGAT
775 CCAGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAAGTTCTCCGGCGATGCTCCGACGAT
** * *
14406659 GGTGCCCTGGTGAAGAAAAATGCGG
840 GGTGCCCTGACGAAGAAAAATACAG
*
14406684 CAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTT-GACTGGGAATGAAC
1 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * **
14406748 TCCGTATGCCAAAGTCAAGCCACGAAACGAGCGTGCGGGCATTCAGCATGCTGGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-TTCAGC-CGCCAGAGGGGCGGGAT
* *
14406813 GCGTAAGCCGAGGATCGACT-GGGTCCCCCTCTATGTGCTGTCGATCCTACTACCGCAACCCTCG
129 GCGCAAGCCGGGGATCG-CTCGGGTCCCCCTCTATGTGCTGTCGATCCTACTACCGCAACCCTCG
14406877 GTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAACGAGCGTA
193 GTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAA-GA-CGTA
*
14406942 CGGGCGGGCTGGCGGGCAGGCACTACGTCGGCC-GAAGAGACGGGATGCGCAAGCCATGGATCGA
256 -GGGC-GGC-GGCGGGC-GGCACTACGCCGGCCAG-AGAGACGGGATGCGCAAGCCATGGATCGA
14407006 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTT
316 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTT
* * * *
14407071 GTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCAAGGCAAGACGACTCCTTTTCT
381 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTCT
* * * *
14407136 ATTTTTTACGAA-TTTGCAAACTTTTTGCGGTTCAGGATTTTTGAAAATTTTTTTCG-AAGGATT
446 ATTTTTCAC-AATTTTTCAAACTTTTTGCGGTTCAGGATTTTTTAAAA-TTTTTTCGAAAGGAGT
* *
14407199 TTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGGTGGCATGCACAAAAAAATTCAGCT
509 TTTGACCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* *
14407264 AAAAACTCATAGTGTAGAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
574 AAAAACTCATAGTGTACAAGATTTTGTGACCATTAGAAAAAAGTGTCCCCATTTCAGACACTTTA
*
14407329 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGT
639 ATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGT
* *
14407394 TTAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCGTGTGCACA
704 TTAATGAGGGATAGCGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCACA
* * *
14407459 CACCCCCCCGGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAGGTTCTCTGGCGATGCTC
769 CA-CCCCCCAGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAAGTTCTCCGGCGATGCTC
*
14407524 CGATGATGGTGCCCTGACGAAGAAAAATACAG
833 CGACGATGGTGCCCTGACGAAGAAAAATACAG
* * * * * * * * ****
14407556 C-ACCAGCACATGCCCGAGCCCAGTAT-GT-G-CTGCCGTACCCTCGGTCCGGTCTAAT-CTTAG
1 CAACC--CTC-GGTCCG-G-TCTG-ATCTTAGACTG-GGAATGAAC--TCC-G--T-ATGCTTAG
* * * *
14407616 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGCATGCGGGCGCTT-AGTCGGC
53 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GG-GCTTCAG-CCGC
* * ** * *
14407680 CAGAGGGGCGGGATGCGCAAGCTGGGGATCGTTCGGGTCCCCCTCTATGTGCTACCGATCTTGCT
115 CAGAGGGGCGGGATGCGCAAGCCGGGGATCGCTCGGGTCCCCCTCTATGTGCTGTCGATCCTACT
* * * * *
14407745 ACCGTAACCCTTGGTCCGATCTGATCTTAGACTGTGAATGAACTCCATATGCCTAAGCCAACC-A
180 ACCGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * *
14407809 ATGAAATGA-GT-GGACGAGCGGGCGGGCGGGCACTACGCCAGCCAGAGAAACGGGATGCGTAAG
245 A-GAAA-GACGTAGGGCG-GC-GGCGGGC-GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * *
14407872 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTTTGTGTGCCAATGCCAT
305 CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAT
14407937 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
370 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
*
14408002 ACTT-GTTTTCTATTTTTCACAATTTTTCAAACTTTTTACGGTTC-GAGATTTTTTAAAATTTTT
435 A-TTCGTTTTCTATTTTTCACAATTTTTCAAACTTTTTGCGGTTCAG-GATTTTTTAAAATTTTT
* * * * * * * * *
14408065 TTGAAAGGGGTTTTGGCCCCAAACTTGGTAGACATGATCCGTATATTTTTATTGCCATGCGCTAA
498 TCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACAAA
14408130 AAAATTCAGCTAA
563 AAAATTCAGCTAA
14408143 GCCAACTAAC
Statistics
Matches: 1262, Mismatches: 142, Indels: 86
0.85 0.10 0.06
Matches are distributed among these distances:
851 2 0.00
852 51 0.04
853 161 0.13
854 4 0.00
856 1 0.00
857 2 0.00
858 1 0.00
861 2 0.00
863 1 0.00
865 3 0.00
867 1 0.00
868 1 0.00
869 297 0.24
870 156 0.12
871 9 0.01
872 77 0.06
873 2 0.00
874 6 0.00
875 5 0.00
876 14 0.01
877 279 0.22
878 3 0.00
879 2 0.00
880 7 0.01
881 168 0.13
882 5 0.00
883 2 0.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (864 bp):
CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCTTCAGCCGCCAGAGGGGCGGGATGC
GCAAGCCGGGGATCGCTCGGGTCCCCCTCTATGTGCTGTCGATCCTACTACCGCAACCCTCGGTC
TGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAAGACGTAGGGCG
GCGGCGGGCGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTA
GGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTCTATTTTTCACA
ATTTTTCAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGACCCCAAA
CTTGGTAGACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCATAG
TGTACAAGATTTTGTGACCATTAGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
AGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTAATGAGGGAT
AGCGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCACACACCCCCCAGCC
CCCCCGATCGTCGAAACCCCAATACCGTCGGTCAAGTTCTCCGGCGATGCTCCGACGATGGTGCC
CTGACGAAGAAAAATACAG
Found at i:14409857 original size:25 final size:26
Alignment explanation
Indices: 14409823--14409874 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
14409813 CCGGTCTGAT
14409823 CTTAGACTGGGAATGAAC-TCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
14409848 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTTCGTATG
14409874 C
1 C
14409875 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 18 0.69
26 8 0.31
ACGTcount: A:0.27, C:0.17, G:0.27, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTTCGTATG
Found at i:14410749 original size:26 final size:26
Alignment explanation
Indices: 14410720--14410772 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14410710 CTGATCCGAT
14410720 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14410746 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14410772 C
1 C
14410773 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14412324 original size:26 final size:26
Alignment explanation
Indices: 14412288--14412340 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14412278 CTGGTCTGAT
14412288 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14412314 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14412340 C
1 C
14412341 CTAGGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14413213 original size:26 final size:26
Alignment explanation
Indices: 14413173--14413225 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14413163 CTGGTCTGAT
14413173 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
*
14413199 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
14413225 C
1 C
14413226 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:14413606 original size:901 final size:882
Alignment explanation
Indices: 14411562--14414101 Score: 3672
Period size: 875 Copynumber: 2.9 Consensus size: 882
14411552 GCTTGAGCTG
*
14411562 CCGTAACCCTCA-TCTGGTCTGATCTTAGAGTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
1 CCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
*
14411626 GAAACGAGCGGGTGGGCGGGCGGGCACTACGCCAGCCAGAGAGAC-AGGATGCGCAAGCCGTGGA
66 GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGA-GATGCGCAAGCCGTGGA
* * * * * *
14411690 TCGATAAGGTGGTAGGTGGGTTTACGCACACCTTCATAATTCTGCCTACCAATGCCATTTTTATG
130 TCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATG
*
14411755 GCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGATGACTCGTT
195 GCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
14411820 TTCTATATTTT-ACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAACTTTTTTCAGAAGG
260 TTCTAT-TTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
*
14411884 ACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCA
324 ACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGG-TTGCAC-AAAAAATTCA
* *
14411949 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCATTTTAGACACT
387 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * *
14412014 TTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTTGA
452 TTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
14412079 GGTTTGATGAAGGATAGGTGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGC
517 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* ** * *
14412144 GCACAACCCCCCGACCCCCCGACCGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCGACGA---
582 GCAC-ACCCCCCGGCCCCCCGATTGCCGGAACCCCAATG-CGCCGGTCAGGTTCTCCGACGATGC
** * * *
14412206 --T--G--GTGCCCCGACGAAGAAAAATACGGCACCAACACATGCCCGAGCCTAGCATGTGCTGC
645 TCTGCGATGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGGCCGAGCCTAGCATGTGCTGT
*
14412265 CACAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
710 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
* * *
14412330 ACTCCGTATGCCTAGGTCAACCCACAAAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGGGGA
775 ACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGGGGA
* * * *
14412395 TGCGCAAGCTGGGGATCGGCCGAGTCCCCCTTTGCATGCTGCT
840 TGCGCAAGCAGGGGATCGACCGAGTCCCCCTTTGCATCCTACT
* * * * *
14412438 --GCAACCCTCAGTCTGGTCCGATCTTAGACTGAGAATGAACTTTGTATGCCTAAGCCAACTGAC
1 CCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
* * * * *
14412501 GAAACGAGCGGGCGGACGGGCGGGCAGTACACCAGCGAGAGAGACGGGATGCGCAAGCCGTGGAT
66 GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAT
* * *
14412566 CGATAAGGTGGTAGGTGGATTTAGGCAAATCTTCATATTTCTACATGCTAATGCCATTTTTATGG
131 CGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGG
* *
14412631 CTTGTAAATTCATACAGTGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
196 CTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * *
14412696 TCTATTTTTCACGATTTTTGAAACTTTTCACGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGAG
261 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAC
*
14412761 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGTGGGCACAACAAAATTCAGC
326 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGT-TGCACAA-AAAATTCAGC
* * * * *
14412826 TAAAAACTCAAAGTGTACAAGTTTTTGTGACCATTTGAAAAAAATGT-CCTATTTGAGACACTTT
389 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
14412890 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCAAGG
454 AATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
14412955 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGC
519 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
14413020 GCACCCCCCGGCCCCTCTGATTGCCGGAACCCCAATACTGCCGGTCAGGTTCTCCGACGATGCTC
584 ACACCCCCCGGCCCC-CCGATTGCCGGAACCCCAATGC-GCCGGTCAGGTTCTCCGACGATGCTC
*
14413085 TGGCGATAGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGGCCGAGCCTAGCATGTGCTAT
647 T-GCGAT-GTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGGCCGAGCCTAGCATGTGCTGT
* * *
14413150 GGCAACCCTCAGTCTGGTCTGATCTTAGACTGGCAATGAACTCCGTATGCTTAGACTGGGAATGA
710 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
*
14413215 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGG
775 ACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGG-GGG
* * *
14413280 ATGTGCAAGCAGGGGATCGATCGGGTCCCCCTCTGTGTCTTGTCGATCCTACT
839 ATGCGCAAGCAGGGGATCGACCGAGT-CCCC-C----T-TTG-C-ATCCTACT
* * * * *
14413333 ACCGTAACCCTCAGTTTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCAAAGACAACCGA
1 -CCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGA
* *
14413398 CGAAACGAGCGGGCGGGCGGGGGGCGGGCACTACGTCGGCCAGAGAGACGAGATGCGCAAGCCGT
65 CGAAACGAGCGGGCGGGC---GGGCGGGCACTACGCCAGCCAGAGAGACGAGATGCGCAAGCCGT
* * * *
14413463 GGATCGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTC
127 GGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTT
*
14413528 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
192 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGACGACTC
*
14413593 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAA
257 GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA
* * * *
14413658 GGATTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTAGTTTTGTTGGCTTGCACAAAACAATT
322 GGACTTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGG-TTGCACAAAA-AATT
14413723 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
385 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
14413788 CTTTAATGCCTACTTGCAGGAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
450 CTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * * ** *
14413853 GAGGTTTGATGAGCGATAGGGTGCCAATATAAGGGCCAAGTACCAGCACCCATTGTGCATCTTGT
515 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* *
14413918 GCGCACACCCCCCGGCCCCCCCGATTGCCGGAACCCCAATGGCGCCGGTCAGGCTCTCCGGCGAT
580 GCGCACACCCCCCGG-CCCCCCGATTGCCGGAACCCCAAT-GCGCCGGTCAGGTTCTCCGACGAT
*
14413983 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACAT-GCCTGAGCCTAGCATGT
643 GCTCTG-CGAT-GTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGGCC-GAGCCTAGCATGT
* * *
14414047 ACTGTCGCAACCCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTTCGTATGC
705 GCTGTCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
14414102 CTAAGCCAAC
Statistics
Matches: 1480, Mismatches: 143, Indels: 56
0.88 0.09 0.03
Matches are distributed among these distances:
873 13 0.01
874 187 0.13
875 378 0.26
879 1 0.00
882 1 0.00
885 169 0.11
886 24 0.02
887 4 0.00
888 1 0.00
892 1 0.00
893 3 0.00
894 1 0.00
895 6 0.00
898 69 0.05
900 2 0.00
901 328 0.22
902 287 0.19
903 5 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (882 bp):
CCGTAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGCGGGCGGGCACTACGCCAGCCAGAGAGACGAGATGCGCAAGCCGTGGAT
CGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAC
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGTTGCACAAAAAATTCAGCTA
AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
ACCCCCCGGCCCCCCGATTGCCGGAACCCCAATGCGCCGGTCAGGTTCTCCGACGATGCTCTGCG
ATGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGGCCGAGCCTAGCATGTGCTGTCGCAAC
CCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGGGGATGCGCA
AGCAGGGGATCGACCGAGTCCCCCTTTGCATCCTACT
Found at i:14414823 original size:26 final size:26
Alignment explanation
Indices: 14414787--14414839 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14414777 CCGGTCTGAT
14414787 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
14414813 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14414839 C
1 C
14414840 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14416406 original size:713 final size:716
Alignment explanation
Indices: 14414963--14416428 Score: 2275
Period size: 713 Copynumber: 2.1 Consensus size: 716
14414953 ACCCTCAGTT
* * *
14414963 TGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCAAAGACAACCGACGAAACGAGCGGGCGG
1 TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGACAACCGACGAAACAAGCGGAC-G
*
14415028 GCGGGGGGCGGGCACTACGTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGT
65 GCGGGGGGCGGGCACTACCTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGT
* *
14415093 ATGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTCATGGCTTGTAAATTCA
130 AGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTCATGGCTTGTAAATTCA
* * *
14415158 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
195 TACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAC
* * *
14415223 GATTTTTAAAACTTTTTGAGGTTCGGGATTTGTTAAAATTTTTTCGAAAGGAGTTTTAACCCCAA
260 AATTTTCAAAACTTTTTGAGGTTCGGGATTTGTTAAAATTTTTTCGAAAGGAGTTTGAACCCCAA
* *
14415288 ACTTGGAAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
325 ACTTGGAAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAA
* * ** *
14415353 GTGTACAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAATTTAAGGGCTATTGA
390 GTGTACAAGATTTTGTGAACATTTGAAAAAAACGTCCCCATTTCAGACAATTTAAGGGCTACTGA
14415418 CAGCAAACCTATAAAATCTCAAATGGTCTTTAAGGAGGTGTGAGTTCTCAAGGTTTGATAAGGGA
455 CAGCAAACCTATAAAATCTCAAATGGTCTTTAAGGAGGTGTGAGTTCTCAAGGTTTGATAAGGGA
*
14415483 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCGGC
520 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * *
14415548 CCCCCCAATCGCTGGAACCCCAATGCCATCGATCAGGCTCTCTGGCGATGCTCCAGTGATGGTGC
585 CCCCCCAATCGCTGGAACCCCAATGCCACCGATCAGGCTCTCCGACGATGCTCCAGTGATGGTGC
* * ** * * *
14415613 CCCGGCGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGTAACCCTCGG
650 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCACGA
14415678 TC
715 TC
* * * *
14415680 TGGTCTGATCTTAGACTGGGAATGAAATTCGTATGCCTAAGCCAACCGACGAAACAAGCGGAC-G
1 TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGACAACCGACGAAACAAGCGGACGG
*
14415744 -GGTGGGCGGGCACTACACT-GGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGT
66 CGGGGGGCGGGCACTAC-CTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * * * *
14415807 AGGTGGGTTTAGTCACATTTTCGTATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
130 AGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTCATGGCTTGTAAATTCA
14415872 TACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAC
195 TACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAC
* * *
14415937 AATTTTCAAAA-TTTTT-ATGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTGTTGCA-CCC
260 AATTTTCAAAACTTTTTGA-GGTTCGGGATTTGTTAAAATTTTTTCGAAAGGAGT-TTGAACCCC
* * *
14415999 AAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCG
323 AAACTTGGAAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCG
* *
14416064 AAGTGTACAAGATTTTGTGAACATTTGAAAAAAACGTCCCCATTTTAGACACTTTAAGGGCTACT
388 AAGTGTACAAGATTTTGTGAACATTTGAAAAAAACGTCCCCATTTCAGACAATTTAAGGGCTACT
* *
14416129 GACAGCAAACCTGTAAAATCTCAAATGGTCTTTAAAGG-GGTGTGAGTTCTCAAGGTTTGATGAG
453 GACAGCAAACCTATAAAATCTCAAATGGTCTTT-AAGGAGGTGTGAGTTCTCAAGGTTTGATAAG
14416193 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
517 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * *
14416258 GGCCCCCCCGATTGCTGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCC-GATGATG
582 GGCCCCCCCAATCGCTGGAACCCCAATGCCACCGATCAGGCTCTCCGACGATGCTCCAG-TGATG
* * * *
14416322 GTTCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCTGCCACCC
646 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCC
14416387 ACGATC
711 ACGATC
14416393 TGGTCCT-ATCTTAGACTGGGAATGAACTCCGTATGC
1 TGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGC
14416429 TTAGACTGGG
Statistics
Matches: 682, Mismatches: 61, Indels: 16
0.90 0.08 0.02
Matches are distributed among these distances:
712 2 0.00
713 425 0.62
714 197 0.29
715 2 0.00
717 56 0.08
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.26
Consensus pattern (716 bp):
TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCAAAGACAACCGACGAAACAAGCGGACGG
CGGGGGGCGGGCACTACCTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTA
GGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTCATGGCTTGTAAATTCAT
ACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACA
ATTTTCAAAACTTTTTGAGGTTCGGGATTTGTTAAAATTTTTTCGAAAGGAGTTTGAACCCCAAA
CTTGGAAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAAG
TGTACAAGATTTTGTGAACATTTGAAAAAAACGTCCCCATTTCAGACAATTTAAGGGCTACTGAC
AGCAAACCTATAAAATCTCAAATGGTCTTTAAGGAGGTGTGAGTTCTCAAGGTTTGATAAGGGAT
AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
CCCCCAATCGCTGGAACCCCAATGCCACCGATCAGGCTCTCCGACGATGCTCCAGTGATGGTGCC
CCGACGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCACGAT
C
Found at i:14416438 original size:26 final size:26
Alignment explanation
Indices: 14416402--14416454 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14416392 CTGGTCCTAT
*
14416402 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
14416428 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
14416454 C
1 C
14416455 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:14417346 original size:26 final size:26
Alignment explanation
Indices: 14417294--14417347 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
14417284 GGTCCGATCT
* *
14417294 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCATAAGCC
*
14417320 TAGACTGGGAATGAACTCTATAAGCC
1 TAGACTGGGAATGAACTCCATAAGCC
14417346 TA
1 TA
14417348 TGTCAACCCA
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.31, C:0.20, G:0.24, T:0.24
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCATAAGCC
Found at i:14417877 original size:882 final size:877
Alignment explanation
Indices: 14415631--14418200 Score: 3454
Period size: 882 Copynumber: 2.9 Consensus size: 877
14415621 AGAAAAATGT
* * * * *
14415631 GGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGAC
1 GGCACCAGCACATGCCCGAGCCTAACATGTGCTG-CGCAACCCTCGGTCTGGTCCGATCTTAGAC
* * * * * *
14415696 TGGGAATGAAATTCGTATGCCTAAGCCAACCGACGAAACAAGCGGACGGGTGGGCGGGCACTACA
65 TGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACAAGCGGAAGGGCGGGCGGGCACTACG
* * * *
14415761 CTGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGTCACATT
130 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
*
14415826 TTCGTATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
195 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * * *
14415891 TTCACGTAAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAC-AATTTTCAAAATTTTTAT
260 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAT
*
14415955 GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTGTT-GCACCCAAACTTGGTAGACGTGATCC
325 GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC-CCCAAACTTGGTAGACGTGATCC
*
14416019 TTTTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
389 TTTTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGA
* * * * * *
14416084 ACATTTGAAAAAAACGTCCCCATTTTAGACACTTTAAGGGCTACTGACAGCAAACCTGTAAAATC
454 CCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATC
* *
14416149 TCAAATGGTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
519 TCAAATGCTCTTT-AAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
*
14416214 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATTGCTGGAAC
583 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGC-GGAAC
* * *
14416279 CCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTTCCCCGATGAAGAAAAATGC
647 CCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGC
* * * * * *
14416344 GGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCTGCCACCCAC-GATCTGGTCCTATCTTAGA
712 GGCACCAGCACATGCCCGAGCCCAGCATGTGCT-CCGCAACCCTCAG-TCCGGTCCGATCTTAGA
* * * **
14416408 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTTAACCCTTGAAA
775 CTGGGAATGAACTCCGTATGCCTAGACTGGGAATGAACTCCATAAGCCTAAGTCAACCCACGAAA
* * **
14416473 CGAGCGTGCGGACGCTCAGCCGACAAGAGGGGCGGGATGCGCAAGTTGG
840 CGAACGGGCGGACGCTCAGCCGACAAGA-------GA----CAAGTTAC
* * * * ** * * * *
14416522 GGATCGACCAGGTA-A-CCCTCTGCGTGCTGCCGATCCTGCTGCAACAACCCTCGGTCCGGTCCA
1 GG--C-ACCA-GCACATGCC-C-GAG-CCTAAC-AT-GTGCTGC-GCAACCCTCGGTCTGGTCCG
* *
14416585 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAATCGACG--A-AA-C-G-A--GCGGGCA
56 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACAAGCGGAAGGGCGGGCG
* * *
14416642 GGCACTACGTCGGCAAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
121 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
14416707 AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGTC
186 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * * ** * *
14416772 CCTTAAGCCATCACATG-AGCTTTCGTGGCAAGATGACTCAATTTCTATTTTTCATGATTTCTGA
251 CCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
* * * * * *
14416836 AACATTTTACGGTTCGGGATTTTTTAAAATTTTTT-TGAAGGGAGTTTTGGCTCGAAACATGGTA
315 AACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCGGAA-GGAGTTTTGGCCCCAAACTTGGTA
* * * *
14416900 GACATGATCATTTTATTTTTTTTGGCATGCATAAAAAAAATCAGCTAAAAACTCAAAGTGTACAA
379 GACGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCAAAGTGTACAA
* *
14416965 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGTTACTGGCAGCAAAC
444 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGTTACTGGCAGCAAAC
*
14417030 CTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCC
509 CTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *** * *
14417095 AATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCTAACCCGCCCTAT
574 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* * * *
14417160 CGTCGGAACCCCAATGCTGTCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAA
639 CG-CGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAA
* * * *
14417225 GAAAAATGCGGCACCAACACATGCCCGAGCCCAGCGTGTCCTATCGCAACCCTCAGTCCGGTCCG
703 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-CCGCAACCCTCAGTCCGGTCCG
* *
14417290 ATCTTAGACTGGGAATGAACTCCGTATGCCTAGACTGGGAATGAACTCTATAAGCCTATGTCAAC
767 ATCTTAGACTGGGAATGAACTCCGTATGCCTAGACTGGGAATGAACTCCATAAGCCTAAGTCAAC
**
14417355 CCACGAAACGAACGGGCGGACGCTCAGCCGGTGAAGA-A-AA-TTAC
832 CCACGAAACGAACGGGCGGACGCTCAGCC-GACAAGAGACAAGTTAC
* * *
14417399 GGCACCAGCACATGCCCGAGCCTAACATGTGCTGTCGCAACCCTCGGTCTGATCCGATCTCAGAT
1 GGCACCAGCACATGCCCGAGCCTAACATGTGCTG-CGCAACCCTCGGTCTGGTCCGATCTTAGAC
*
14417464 TGGGAATGAACTCCGTATGCCTAAGCCAATCAACGAAACAAGCGGGCGGAAGGGCGGGCGGGCAC
65 TGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACAA----GCGGAAGGGCGGGCGGGCAC
* *
14417529 TACGCCGGCCAGGGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCA
126 TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCA
*
14417594 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTA
191 CATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
*
14417659 AGCCTTCACGTGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
256 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTT
* *
14417724 TTGTGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
321 TTATGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * * *
14417789 TCCTTGTATTTTTGTTGGCATGCACAAATAAATTCAGCTAAAAACTCAAAGTGTACAGGATTTTG
386 TCCTTTTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCAAAGTGTACAAGATTTTG
* * *
14417854 TGACCATTTGAAAAAATTGTCCCCATTTCAAACACTTTAATGGCTT-CTGGTAGCAAACCTGTAA
451 TGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGG-TTACTGGCAGCAAACCTGTAA
*
14417918 AATCCCAAATGCTCTTTAAGGTGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
515 AATCTCAAATGCTCTTTAAGG-GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
**
14417983 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCAAAC-CCCCCCGGCCCCCCCGATCGCCG
579 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCG-CG
*
14418047 GAACCCCAATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGATGATGGTGCCCCGACGAAGAAAA
643 GAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGAAAA
*
14418112 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGATCCGATCTT
708 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-CCGCAACCCTCAGTCCGGTCCGATCTT
14418177 AGACTGGGAATGAAC-CTCGTATGC
772 AGACTGGGAATGAACTC-CGTATGC
14418201 GAAGCCAACC
Statistics
Matches: 1459, Mismatches: 183, Indels: 83
0.85 0.11 0.05
Matches are distributed among these distances:
870 61 0.04
871 3 0.00
872 4 0.00
873 6 0.00
874 6 0.00
875 3 0.00
877 4 0.00
878 3 0.00
879 1 0.00
880 1 0.00
881 1 0.00
882 530 0.36
883 88 0.06
889 2 0.00
890 460 0.32
891 202 0.14
892 2 0.00
893 4 0.00
894 6 0.00
895 6 0.00
896 3 0.00
897 3 0.00
898 60 0.04
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (877 bp):
GGCACCAGCACATGCCCGAGCCTAACATGTGCTGCGCAACCCTCGGTCTGGTCCGATCTTAGACT
GGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACAAGCGGAAGGGCGGGCGGGCACTACGC
CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATG
GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
TTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACC
ATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAAATCTC
AAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCGGAACCCCA
ATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGCGGCA
CCAGCACATGCCCGAGCCCAGCATGTGCTCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGA
ATGAACTCCGTATGCCTAGACTGGGAATGAACTCCATAAGCCTAAGTCAACCCACGAAACGAACG
GGCGGACGCTCAGCCGACAAGAGACAAGTTAC
Found at i:14418866 original size:26 final size:26
Alignment explanation
Indices: 14418837--14418887 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
14418827 CGGTCTGATC
14418837 TTAGACTGGGAATGAACTCCGTATGA
1 TTAGACTGGGAATGAACTCCGTATGA
*
14418863 TTAGACTTGGAATGAACTCCGTATG
1 TTAGACTGGGAATGAACTCCGTATG
14418888 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.16, G:0.25, T:0.29
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGA
Found at i:14420862 original size:26 final size:26
Alignment explanation
Indices: 14420824--14420876 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14420814 CTGATTTGAT
*
14420824 CTTAGACTAGGAATGAGCTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14420850 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14420876 C
1 C
14420877 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14421584 original size:571 final size:571
Alignment explanation
Indices: 14420419--14422388 Score: 3107
Period size: 571 Copynumber: 3.5 Consensus size: 571
14420409 CATGTGCAGT
* * * * *
14420419 CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
1 CGCAAGCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACA
* * * * *
14420484 AAAC-A--AG-CGGGAGGTCGGGCGGGCACTGCGTCGACCAGAGAGACGGGATGCGCAAGCCGTG
66 AAACGAGCAGACGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
14420545 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
14420610 TGGCTTGTAAATTCAAACAATGATCCCTT-AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCA
196 TGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCA
* * *
14420674 TTTTTCCGCCCCCCCGGTCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGCGATGCTCTGG
261 TTTTTCTG-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCTGG
* * *
14420739 CGATGGTCCCCCGACGAAGAAAGATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCTGC
325 CGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGC
*
14420804 AACCCTCGG-TCTGATTTGATCTTAGACTAGGAATGAGCTCCGTATGCTTAGACTGGGAATGAAC
390 AACCCTCGGTTC-GATATGATCTTAGACTAGGAATGAGCTCCGTATGCTTAGACTGGGAATGAAC
*
14420868 TCCGTATGCCTATGTCAACCCACTAAACGAGCGTGCGGGCGCTCAGTCGGCCAAAGGGGCGGGAT
454 TCCGTATGCCTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAAAGGGGCGGGAT
* * ***
14420933 GCGCAAATCGGGGATCGATCGGGTCCCCCTCTGCAAGCTACCGATCCTGCTGC
519 GCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCAAGCTGTTGATCCTGCTGC
* * * *
14420986 CGCAAGACTCGATTTGGTCCAATCTTAGATTGGGAATGAACTACGTATGCCTAAGCCAACCGACA
1 CGCAAGCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACA
* *
14421051 AAACGAGCAGGCGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGTGCAAGCCGTG
66 AAACGAGCAGACGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
14421116 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
14421181 TGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCA
196 TGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCA
* *
14421246 TTTTTCTGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTTTGGCGATGCTCTGGT
261 TTTTTCTGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCTGGC
* *
14421311 GATGGTGCCTCGATGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCA
326 GATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCA
* * *
14421376 ACCCTCGGTTCGATATGATCTTAGACTAGGAATGAGCTCCGTACGCCTAGATTGGGAATGAACTC
391 ACCCTCGGTTCGATATGATCTTAGACTAGGAATGAGCTCCGTATGCTTAGACTGGGAATGAACTC
* * * * *
14421441 CGTATGCCTATGTCAAACCACGGAACGAGCGTGCGGGCGCTCAGTCGACCAAAGAGGCAGGATGC
456 CGTATGCCTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAAAGGGGCGGGATGC
* * * *
14421506 GCAAGCCGAGGATCGACCGAGTCCCCCTCTGCAAGCTGTTGATCCTGCTAC
521 GCAAGTCGGGGATCGACCGGGTCCCCCTCTGCAAGCTGTTGATCCTGCTGC
* * *
14421557 CGCAAGCCTCGATTTGG-CTTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGAT
1 CGCAAGCCTCGATTTGGTC-CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * *
14421621 AAAACGAACAGACGGGTGGGTGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGTGCAAGCCGT
65 AAAACGAGCAGACGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
14421686 GGATCGATAGGGTGGTAGGTGGG-TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
130 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
14421750 ATGGCTTGT-AA-TCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
195 ATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * * ** *
14421813 ATTTTTCTACCCCTCCGATCGTCGGAACCCCAATGCTGCCAGTCAGGTTCTCCAGCGATGCTCCG
260 ATTTTTCTGCCCC-CCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCTG
14421878 GCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCG
324 GCGATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCG
* *
14421943 CAACCCTCGGTCCGATCTGATCTTAGACTAGGAATGAGCTCCGTATGCTTAGACTGGGAATGAAC
389 CAACCCTCGGTTCGATATGATCTTAGACTAGGAATGAGCTCCGTATGCTTAGACTGGGAATGAAC
* *
14422008 TCCGTATGCCTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCATTCGGCCAGAGGGGCGGGAT
454 TCCGTATGCCTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAAAGGGGCGGGAT
* * *
14422073 GCGCAAGTCGGGGATCGGCCGGGTCCCCCTCTGTAAGCTGTTGATCCTGCTGT
519 GCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCAAGCTGTTGATCCTGCTGC
* * * *
14422126 CACAAGCCTCGGTTTGGTCCGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACA
1 CGCAAGCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACA
* * * * *
14422191 AAACGAGCAGACGGGTGGGCGGGCGAGCACTACACCGGCCAAAGAGGC-GGATGCGCAAGTCGTG
66 AAACGAGCAGACGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
14422255 GATCGATAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAGTGCCATTTTTA
131 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* *
14422320 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
196 TGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCA
14422385 TTTT
261 TTTT
14422389 CTATTTTTCG
Statistics
Matches: 1285, Mismatches: 106, Indels: 20
0.91 0.08 0.01
Matches are distributed among these distances:
567 60 0.05
568 100 0.08
569 418 0.33
570 56 0.04
571 607 0.47
572 44 0.03
ACGTcount: A:0.23, C:0.26, G:0.28, T:0.23
Consensus pattern (571 bp):
CGCAAGCCTCGATTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACA
AAACGAGCAGACGGGTGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
TGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCA
TTTTTCTGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCTGGC
GATGGTGCCCCGACGAAGAAAAATGAGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCA
ACCCTCGGTTCGATATGATCTTAGACTAGGAATGAGCTCCGTATGCTTAGACTGGGAATGAACTC
CGTATGCCTATGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAAAGGGGCGGGATGC
GCAAGTCGGGGATCGACCGGGTCCCCCTCTGCAAGCTGTTGATCCTGCTGC
Found at i:14421993 original size:26 final size:26
Alignment explanation
Indices: 14421964--14422016 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14421954 CCGATCTGAT
*
14421964 CTTAGACTAGGAATGAGCTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14421990 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14422016 C
1 C
14422017 CTATGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14423619 original size:26 final size:26
Alignment explanation
Indices: 14423579--14423631 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14423569 CCAGTCTGAT
*
14423579 CTTAGACTAGCAATGAACTCCGTATG
1 CTTAGACTAGCAATGAACGCCGTATG
* *
14423605 CTTAGACTAGGAATGAACGCTGTATG
1 CTTAGACTAGCAATGAACGCCGTATG
14423631 C
1 C
14423632 CGAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGCAATGAACGCCGTATG
Found at i:14425249 original size:26 final size:26
Alignment explanation
Indices: 14425209--14425261 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14425199 CTGGTCTGAT
*
14425209 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
14425235 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
14425261 C
1 C
14425262 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:14425989 original size:17 final size:17
Alignment explanation
Indices: 14425969--14426002 Score: 59
Period size: 17 Copynumber: 2.0 Consensus size: 17
14425959 AGCCCCCCGA
14425969 TCGTCGGAACCCCAATG
1 TCGTCGGAACCCCAATG
*
14425986 TCGTCGGTACCCCAATG
1 TCGTCGGAACCCCAATG
14426003 CATCCAGTCA
Statistics
Matches: 16, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
17 16 1.00
ACGTcount: A:0.21, C:0.35, G:0.24, T:0.21
Consensus pattern (17 bp):
TCGTCGGAACCCCAATG
Found at i:14426489 original size:876 final size:870
Alignment explanation
Indices: 14424466--14431284 Score: 7021
Period size: 896 Copynumber: 7.7 Consensus size: 870
14424456 ACCCAGCATG
** *
14424466 TGCTACCGCAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACCCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14424531 CCGACGAAATGAGCAGGCGGGTGGGCGGGCACTACACTGGCTAGAGAGAC-GGATGCGCAAGCCA
66 CCGACGAAA--CG-A-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
14424595 TGGATCGATAGGGTGGTAGGTGGGTTTACGCACGTCTTCATATTTTTGCATTCCAATGCCATTTT
127 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
14424660 TATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACT
192 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * *
14424725 CGGTTTCTATTTTTCACGATTTTGGAAACTTTTTGCAGTTTGGGATATTTTAAAATTTTTTCGTA
257 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG-A
* *
14424790 AGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCGTGCACAAAAAAAA
321 AGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAT
*
14424855 TCAGGC-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAGAAGTGTCCCCATTTCAGA
386 TCA-GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14424919 CACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCACAAATGCTCTTTAAGGGGGTGTGAGTTC
450 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
14424984 TCGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCCAAGCACCAGCACCCATCGTACATCAT
515 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
14425049 GTGCGCACACCCCCCCGGCCCGCCCGATCATCGGAACCCCAATGCCGTCGGT--CAGGTTCTCCG
580 GTGCGCACA-CCCCCCAGCCC-CCCGATCGTCGGAACCCCAATGCCGTCGGTACCA-ATGCTCCG
* *
14425112 TC-GATGCTCCGACGATGGTGCCCCG-GCAAAGAAAAATGCAGCACCAGCACATGGCCGAGCCCA
642 TCAGATGCTCCGACGATGGTGCCCCGAG-GAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCA
*
14425175 GCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
706 GCATGTGCTGCCGCAA-CC-C--TC--G---G-TC-----C---G---G---TCCG-AT-CTTAG
* * * * * * *
14425240 ACTGGAAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGACACTCAGTCGAC
745 ACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGGCGCTCAGCCGGC
* * * * *
14425304 CAGAGGGGTGGGATGCGCTAGTCGAGGATCGGCCGGGTCCCCCTCTCCATGCTGTCGATCT
810 CAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGTCGATCC
* * * * * *
14425365 TGCTGCCACAACCTTCGGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** * *
14425430 CCGACGAAACGAGTGGGCGGGCGGGCACTACGTCGGCCAGAGAAAAAGGATGTGCAAGCCGAGGA
66 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
14425495 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* * * *
14425560 CCTTGTAAATTCATACAATGGTCCTTTAAACCTTCACGTGAAGTTTGATGGCAAGACGACTCGTT
196 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* ** * * *
14425625 TTCTATTTTTCATGATTTTCAAAAATTTTTACGGTTCAGGATTTTTTCAAATTTTTTCAGAAGGA
261 TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGA
* * *
14425690 TTTTTGGCCCCGAACTTGGTGGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAG
325 TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
* * *
14425755 CTAAAACCTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTT
390 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* *
14425820 TAATGGCTACTGACAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCAAG
455 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
14425884 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
520 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
*
14425949 CACACCCCCCAGCCCCCCGATCGTCGGAACCCCAATGTCGTCGGTACCCCAATGCATCCAGTCAG
585 CACACCCCCCAGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTA--CCAATGC-TCC-GTCAG
* * * * * * *
14426014 GTTCTCCGGCGATGGTGCCCC-AGGGAAGAAAAATACACCACCATCACATGCTCGAGCCCAGCAT
646 ATGCTCCGACGATGGTGCCCCGA-GGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCAT
*
14426078 GTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCA
710 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCA
* *
14426143 ACCCACGAAACGAACGTGCGGGAGGCACTCAGCCGGCCAGAGGGGTGGGATGCGCAAGTCGGGGA
775 ACCCACGAAACGAACGTGC-GG-GGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGA
*
14426208 TCGGCCGGGTCCCCCTCTACGTGCTGTCGATCC
838 TCGGCCGGGTCCCCCTCTACATGCTGTCGATCC
** * * * * * *
14426241 TGCTGTCGCAACCCTCGGTCGGGTCCGATCTTAGACTGGGAATGAACTCTGTCTACCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * ** * *
14426306 CAGATGAAACGAGCGGGCAGGCGGGCACTATGCCAACCAGAAAGACGGGATGCGCAAGTCGTGGA
66 CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
14426371 TCGATAGGCTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTG-AGTGCCAATGCCATTTTTAT
131 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA-TGCCAATGCCATTTTTAT
* *
14426435 GGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGT
195 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * * * *
14426500 TTTTTATTTTTAATGATTTTTGAAACTTCTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGG
260 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-GAAGG
*
14426565 -TGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAAAA-TC
324 AT-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
* *
14426627 AGCTAAAAAGTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
388 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
14426692 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTG
453 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
*
14426757 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCCATCGCACATCATGTG
518 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * * *
14426822 CGCACACCCCCCGGCCCCTTCGATCGCCTGAACCCCATTACCGTCGGT--C-A-G----GT----
583 CGCACACCCCCCAGCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTACCAATGCTCCGTCAGA
** * * *
14426875 T-CTCCGACGATGGTGCCCCGACAAAGAAACATGC-GACACCAGCACATGCCCAAGCCCAGTATG
647 TGCTCCGACGATGGTGCCCCGAGGAAGAAAAATGCAG-CACCAGCACATGCCCGAGCCCAGCATG
* *
14426938 TGCTGACGCAACCCTCGGTCCGGTCCTATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGG
711 TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATG-A------A--C-T---CT--
* * * *
14427003 GAAAAATAACTCTATATGCCTAAGTCAACCCACGAAATGAGCCTGC-GGGCGCTCAGCTGGCCAG
761 G-------------TATGCCTAAGTCAACCCACGAAACGAACGTGCGGGGCGCTCAGCCGGCCAG
* ** * * * * * *
14427067 AGGAGCAGGATGCGCAAGCCGAGGATCGACTGGGTCCCCCTCTGCGTGCTG-CTGATCT
813 AGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGTC-GATCC
** * **
14427125 TGCTACCGCAACCCTTGGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14427190 CAGACGAAAAGAGCAAGTGGATGGGCGGGCGGGCACTACGACGGCTAGAGAGACGGGATGCACAA
66 CCGACGAAACGAGC--------GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * ***
14427255 GCCGTGAATCGATAGGGTGGTCGGTGGGTTTACGCACATCTTCATATTTCTATGTGCCAATGCCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14427320 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAA
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *** * ** *
14427385 GACTCGCTTTCTATTTTTCAC-AGTTTTCGAAACATTTTAAAATTTTTTTGAAAGTTTTTAAAAT
253 GACTCGTTTTCTATTTTTCACGA-TTTTTGAAAC-TTTT--TA-CGGTTCGGGATTTTTTAAAAT
* *
14427449 TTTTTCGAAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCT
313 TTTTTCG-AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC-
*
14427514 A-AAAAAAA-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCC
376 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
14427577 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGTTCTTTAAGTGGG
441 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
14427642 TGTGAGTTCTCGAGGTTTGATGAAGGATAGGGTGCCAATATAAGGG-CAGAGTACCAGCGCCCAT
506 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA-AGTACCAGCACCCAT
* * * *
14427706 CGCACATCATGTGCG--CA-----CA----CCTGATCGCCGGAACCCCAATGCCG-C-CTATCAG
570 CGCACATCATGTGCGCACACCCCCCAGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTACCA-
* * * **
14427758 GTTCTCCG--ATGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCC
634 ATGCTCCGTCA-GATGCTCCGACGATGGTGCCCCGAGGAAGAAAAATGCAGCACCAGCACATGCC
* * **
14427821 CGAGCCCA-AATGTGCTGTCGCAACCCTCGGTCTAGTCCGATCTTAGACTGGGAATGAACTTCGT
698 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA---C--
*
14427885 ATGCTTAGACTAGGAATGAACTCCCTATGCCTCAGTCAACCCACGAAACGAACGTGC-GGTCGCT
758 -T-C-T-G--T----ATG-----CCTA------AGTCAACCCACGAAACGAACGTGCGGGGCGCT
* * * * * * *
14427949 CAGTCGGCCAGAGGGGTGGGATACGCAAGCCGAGGATTGGTCGGGT-CCCCACTGCATGCTG-CT
802 CAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGTC-
*
14428012 GATCT
866 GATCC
** * ** *
14428017 TGCTGTCGCAACCCTCAGTCCGGTCCGATCTTAGACTCAGAATGAACTCTGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * *
14428082 CCGACGAAACGAGCTGCGGGCGGGCGTGCGGGCGTTACGCCAGCCAGAGAGTCGGGATGCGCAAG
66 CCGACGAAACGA---GCGGGC--G-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * *
14428147 TCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATTTTTGCATGCCAATTCCAT
124 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* *
14428212 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCACGGCAAGACG
189 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
*
14428277 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGACTTTTTAAAATTTTTTC
254 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* ** *
14428342 AAAAGGATTTTTCTCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAA
319 -GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
14428407 AATTCAGCTAAAAACTCGAAGTGTACAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCTATTTC
383 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC-ATTTC
* *
14428471 AGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAG
447 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14428536 TTCTTGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCACACAT
512 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** *** *
14428601 CATGTGCGCACACCCCCCCGACCCCCCGATCATCGGAACCTCCAATGCCACCGGT-CTGGTTCTC
577 CATGTGCGCACACCCCCCAG-CCCCCCGATCGTCGGAACC-CCAATGCCGTCGGTACCAATGCTC
* * * * *
14428665 CGACA-ATGCTCCGGA-GATGGTGCCCCAACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCC
640 CGTCAGATGCTCC-GACGATGGTGCCCCGAGGAAGAAAAATGCAGCACCAGCACATGCCCGAGCC
*
14428728 CAGCATATGCTGCCGCAACCCTTGGTCCAGTCCGATCATAGACTGGGGAATGAACTCCGTATGCT
704 CAGCATGTGCTGCCGCAACCC----T-C-G---G-TC-----C----G---G---TCCG-AT-CT
* * *
14428793 TAGACTGGGAATGAACT-TCGTATGCCTAAGTCAACCCACGAAACGAGCGTAC-GGGCGCTCAAC
742 TAGACTGGGAATGAACTCT-GTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGGCGCTCAGC
** * ** *
14428856 ATGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGGCCGACTCCCCCTCTACATGCTATCGATCC
806 CGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATGCTGTCGATCC
** * * *
14428921 TGCTATGGCAACCCTCAATCCGGTCTGATCTTAGGCTAGGAATGAACTCCGTATG-CTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
14428985 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGAGCACTATGCCGGACAGAGAGACGGGATGCGCAA
66 CCGACGAAACGA----GCGGGCGGGC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
14429050 GCTGTGGATCGATAGGGTGGTAGGTGAGTTTAAGCACATCTACATATTTCTGCATGCCGAATGCC
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-AATGCC
* * *
14429115 ATTTTTATGGCTTGTAAATGCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGC-AGG
187 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * **
14429179 CGACTCGTTTTCTATTTTTCACGA-TTCTCAAA------AC-TTTCAAGATTTTTTAAAATTTTT
252 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* *
14429236 TCGAATGGAGTTTTGGCCCCAAACTCGGTAGACGTGATCCTTGTATTTTTTTTTGGCATGCACAA
317 TCGAA-GGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTTTTGGCATGCACAA
* * * *
14429301 AAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTTGTGGCCATTTGAAAAAAGTGTCTCGAT
380 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
14429366 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
444 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
14429431 GAGTTCTGGAGG-TTGATGAGGGATAGGGGGACAATATAAGGGCCAAGTACCAGCATCCATCACA
509 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * *
14429495 CATCATGTGCGCACACGCCCCCGGCCCGCCGATCGTTGTAAACCCAATGCCGTC-G-ATCAAGTT
574 CATCATGTGCGCACAC-CCCCCAGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTACCAA--T
** ** * *
14429558 TTTTGGT--GATGCTCCGGCGATGGTGCCCCGAGGAAGAAAAATGCAACACCAGCACATGCCCGA
636 GCTCCGTCAGATGCTCCGACGATGGTGCCCCGAGGAAGAAAAATGCAGCACCAGCACATGCCCGA
* *
14429621 GCCCGGCATG-GCTG-C-CTA-CCTCGGT-CGGTCCGAGTCTTAGACT-GGAGATGAACT-TCGT
701 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA-TCTTAGACTGGGA-ATGAACTCT-GT
* * * * *
14429679 ATGCTTACGGGAATGAACTCTGTATCTAAGATAACCACGAACGAG-GTGCGG-GCTCAG-CGGCC
763 ATGCCTA----AGTCAAC-C-----C-ACG--AA--ACGAACGTGCG-G-GGCGCTCAGCCGGCC
** * * * ** * *
14429741 -GA---G-GCAATGCGCAAGTC-GTGATCGGTCGTATCCCTCTCTACGTGCCTG-CTGTATCC
811 AGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTACATG-CTGTC-G-ATCC
* * *
14429797 TACTAACCACAACCCTCAGTCCGGATCTGACCTTAGA-TAGGGAATGAA-T-CGTATGCCTAAG-
1 TGCT-ACCGCAACCCTCAGTCCGG-TCTGATCTTAGACT-GGGAATGAACTCCGTATGCCTAAGC
* * * * * *
14429858 CAACCGACAAAATGAGCAGCTTGGCGGACGGGCACTAC-TC-GCCCGATGA-A--GGATGCACAA
63 CAACCGACGAAACGAGC-G---GGCGGGCGGGCACTACGCCGGCCAGA-GAGACGGGATGCGCAA
* * * * * * **
14429918 -CTGTGGATCGATAGAGT-GTA-G-GGTTTTA-ACACAT-GTCATATTTCTACATGCCAACACCA
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14429977 TTTTTTTGGCTTG-AAA-TCATACAAT-GTCCCTTAAGCC-TCACGTGAAAGTTTCATGGCAAGA
188 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG-AAGTTTCATGGCAAGA
* *
14430038 CGACTCATTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
252 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
14430103 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACAG-GATCCTTGTATTTTTGTTGGCATGCA-TA
317 TC-GAAGGATTTTTGGCCCCAAACTTGGTAGAC-GTGATCCTTGTATTTTTTTTGGCATGCACAA
*
14430166 AAAAATTCAGCTAAAAACTCGAAGTGAACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
380 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * * *
14430231 TCAGATACTTTAATGGCTACTGGTAGCAAACCTATAAAATCTCAAATGTTCTTTAAAGGGGTGTG
445 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
14430296 AGTTCTCCAGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
510 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * * *
14430361 ATCATGTGCGGACACCCCCCGACCCCCCCGATCGTCGAAACCCTAATGTCGTCGGT--CAGGTTC
575 ATCATGTGCGCACACCCCCC-AGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTACCA-ATGC
* * * * * * * * * * *
14430424 TCTGAC-GATGCTCTGATGATGGAGCCTCGATGAAGAAAAATACGGCACCGGCACATGCTCGAGC
638 TCCGTCAGATGCTCCGACGATGGTGCCCCGAGGAAGAAAAATGCAGCACCAGCACATGCCCGAGC
* * * *
14430488 CCAGCAAGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGATTGGGAATGAACTCTGTATGCC
703 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCC
* * * *
14430553 TAACTCAACCAACGAAACG-A-GTGTGTGGGCG-TATAGCCGGCCAGAGGGGTGGGATGCGCAAG
768 TAAGTCAACCCACGAAACGAACGTGCG-GGGCGCT-CAGCCGGCCAGAGGGGTGGGATGCGCAAG
* * *
14430615 CTGGGGATCGACCGGGTCCCCATGC--C-TGCTGTCGATCC
831 CCGGGGATCGGCCGGGTCCCCCT-CTACATGCTGTCGATCC
* * *
14430653 TGCTACCGTAACCCTCAGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
14430718 CTGACGAAAGGAGCGGGTGGGCGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
66 CCGACGAAACGAGC----GGGC--G-GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
14430783 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGGC-TGGCCAATGC
123 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-GCAT-GCCAATGC
*
14430846 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAG
186 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
14430911 AGGACTAGTTTTCTATTTGTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTT
251 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTT
** * * * * * *
14430976 TTTTAAAGTAGTTTTT-GCCCAAAACTTGGCAGACATGGTCCTTGTATTTTTGTTT-GCATGCAA
315 TTTCGAAGGA-TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTTGGCATGCAC
* *
14431039 AAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCA
378 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
** *
14431104 TTTC-GAACACTTTTGTGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGT
443 TTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * *
14431168 GTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAGATAAGGGCCAAGTACTAGCACCCATCG
507 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * **
14431233 CACATCATGTGCGCACACACCCCCCGACTCTCCCGATCACCGGAACCCCAAT
572 CACATCATGTGCGCACAC-CCCCCAG-C-CCCCCGATCGTCGGAACCCCAAT
14431285 TTCGTCCGGC
Statistics
Matches: 5006, Mismatches: 628, Indels: 594
0.80 0.10 0.10
Matches are distributed among these distances:
852 5 0.00
853 7 0.00
854 27 0.01
855 20 0.00
856 21 0.00
857 27 0.01
858 30 0.01
859 134 0.03
860 27 0.01
861 28 0.01
862 18 0.00
863 11 0.00
864 119 0.02
865 216 0.04
866 46 0.01
867 78 0.02
868 17 0.00
869 43 0.01
870 25 0.00
871 33 0.01
872 15 0.00
873 62 0.01
874 250 0.05
875 342 0.07
876 460 0.09
877 40 0.01
878 22 0.00
879 2 0.00
880 9 0.00
881 7 0.00
882 6 0.00
883 3 0.00
884 132 0.03
885 21 0.00
886 3 0.00
887 144 0.03
888 159 0.03
889 9 0.00
890 10 0.00
891 178 0.04
892 270 0.05
893 97 0.02
894 12 0.00
895 171 0.03
896 595 0.12
897 337 0.07
898 86 0.02
899 155 0.03
900 16 0.00
901 70 0.01
902 20 0.00
903 93 0.02
904 173 0.03
905 63 0.01
906 1 0.00
907 1 0.00
908 1 0.00
909 4 0.00
911 1 0.00
912 2 0.00
914 3 0.00
918 1 0.00
920 2 0.00
923 1 0.00
924 1 0.00
926 1 0.00
927 4 0.00
928 2 0.00
929 17 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (870 bp):
TGCTACCGCAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAGGAT
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
ACACCCCCCAGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTACCAATGCTCCGTCAGATGCT
CCGACGATGGTGCCCCGAGGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCAC
GAAACGAACGTGCGGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGG
GTCCCCCTCTACATGCTGTCGATCC
Found at i:14427459 original size:21 final size:21
Alignment explanation
Indices: 14427408--14427465 Score: 80
Period size: 21 Copynumber: 2.7 Consensus size: 21
14427398 TTTTTCACAG
*
14427408 TTTTCGAAACATTTTAAAATT
1 TTTTCGAAAGATTTTAAAATT
* *
14427429 TTTTTGAAAGTTTTTAAAATT
1 TTTTCGAAAGATTTTAAAATT
14427450 TTTTCGAAAGGATTTT
1 TTTTCGAAA-GATTTT
14427466 TGGCCCCAAA
Statistics
Matches: 31, Mismatches: 5, Indels: 1
0.84 0.14 0.03
Matches are distributed among these distances:
21 26 0.84
22 5 0.16
ACGTcount: A:0.33, C:0.05, G:0.10, T:0.52
Consensus pattern (21 bp):
TTTTCGAAAGATTTTAAAATT
Found at i:14427913 original size:26 final size:26
Alignment explanation
Indices: 14427862--14427914 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14427852 CTAGTCCGAT
* * *
14427862 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCCTATG
14427888 CTTAGACTAGGAATGAACTCCCTATG
1 CTTAGACTAGGAATGAACTCCCTATG
14427914 C
1 C
14427915 CTCAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCCTATG
Found at i:14428807 original size:26 final size:27
Alignment explanation
Indices: 14428766--14428817 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 27
14428756 AGTCCGATCA
14428766 TAGACTGGGGAATGAACTCCGTATGCT
1 TAGACTGGGGAATGAACTCCGTATGCT
*
14428793 TAGACT-GGGAATGAACTTCGTATGC
1 TAGACTGGGGAATGAACTCCGTATGC
14428818 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
26 18 0.75
27 6 0.25
ACGTcount: A:0.27, C:0.17, G:0.29, T:0.27
Consensus pattern (27 bp):
TAGACTGGGGAATGAACTCCGTATGCT
Found at i:14432593 original size:714 final size:713
Alignment explanation
Indices: 14430679--14432860 Score: 2307
Period size: 714 Copynumber: 3.0 Consensus size: 713
14430669 AGTCTGGTTT
* * * * * **
14430679 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAAGGAGCGGGTGGGCGGGC
1 GATCTTAGACTGAGAATAAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGACGGGC--G-
* * *
14430744 GGTCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
63 GGT-GGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGATAGGGTGGTAGGTG
* * * * *
14430809 GGTTTAGGCACATCTTCATATTT-T-GGCTGGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
127 GGTTTAGGCAAATCTTCAAATTTCTACG-T-GCCAATGCCATTTTTATGGCTTGCAAATGCATAC
* * ** * *
14430872 AATGGTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAGAGGACT-AGTTTTCTATTTGTCACGA
190 AATGGTCCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACAACTCA-TTTTCTATTTTTCAAGA
* * ** * *** * * *
14430936 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTTTAAAGTAGTTTTTGC-CCAAAA
254 TTTTCGAAACATTTTACGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTGTGGCACC-AAA
* * * * *
14431000 CTTGGCAGACATGGTCCTTGTATTTTTGTTTGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAG
318 CTTGGTAGACATGATCCTTGCATTTTTGTTGGCATGC-ACAAAAAATTCAGCTAAAAACTCAAAG
* * * **
14431065 TGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTCGAACACTTTTGTGGCTACTGGC
382 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAAACACTTTAATGGCTACTGGC
* * * *
14431130 AGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-CAAGGTTTGATGAGGGA
447 AACAAACCTGTAAAATCTCAAAAGCTCTTTAAGGAGGTGTGAGTTCTCCAA-GTTTGATGAGGGA
* * * * *
14431194 TAGGGGGCCAAGATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACACCCCCCG
511 TAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGCACAC-CCCCCAG
* * * * *
14431259 ACTCTCCCGATCACCGGAACCCC-A-----------A---T-T-T--C---G-TCCGGCGATGGT
575 -CCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGT
* * * * * * *
14431301 GCCCCGACGAAGAAAAATGCTGCCCCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTC
639 GCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGACCAGCATCTGCTGCCACAACCCTC
* * * *
14431366 AGACCAATCT
704 GGTCCGATCC
* * * *** * *
14431376 GATCTTAGACTG-GAAATGAACTCCGTTTGCTTAGACTAGGAATGAACTCCGTATGCCTAAATCA
1 GATCTTAGACTGAG-AATAAACTCCATATGC-----CTA--AGCCAA--CCG-A---CGAAA-CG
* * * ** * * * * * * * * *
14431440 AGCCATGAAATGAGCATGCGGGCGCT-CAGTCAGCCAAAGGGGCGGGATGTGCAAGCCGAGGATC
51 AG-C--G-GACGGGCGGGTGGGCACTAC-GTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATC
** * * * * * * * * * * **
14431504 GGCCA-GGTCCCCCCCG-ATGAGGGATATGGGGACAAT-ATAAGGGATATTTCTGCATGCCAACA
111 -GATAGGGT------GGTAGGTGGG-TTTAGGCA-AATCTTCA---A-ATTTCTACGTGCCAATG
* * *
14431566 CCATTTTTTTGGCTTGTAAATGCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
163 CCATTTTTATGGCTTGCAAATGCATACAATGGTCCCTTAACCCTTCACGTGAAGTTTCATGGCAA
** * *
14431631 GATGACTCATTTTCTATTTTTCACGATTTTCGAAACTTTTTACGGTTCAAGATTTTTTAAAATTT
228 GACAACTCATTTTCTATTTTTCAAGATTTTCGAAACATTTTACGGTTCAAGATTTTTTAAAATTT
* * *
14431696 TTTTGGAAGGAGTTGTGGCTCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACA
293 TTTCGGAAGGAGTTGTGGCACCAAACTTGGTAGACATGATCCTTGCATTTTTGTTGGCATGCACA
14431761 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATT
358 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATT
*
14431826 TCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAAAGCTCTTTAAGCG-GGTGT
423 TCAAACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAAAGCTCTTTAAG-GAGGTGT
*
14431890 GAGTTCTCCAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACGCA
487 GAGTTCTCCAAGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACGCA
* * *
14431955 CATCATGTGCGCACACCGCCCCAG-CCCCCCAATGGCCGGAACCTCAATGCCGCCGGTGAGGTTC
552 CATCATGTGCGCACACC-CCCCAGCCCCCCCAATCGCCGGAACCCCAATGCCGCCGGTCAGGTTC
14432019 TCTGGCGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAG-C
616 TCTGGCGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGAC
* ** * *
14432083 ACAGCATGTGCTGCTGCAACCCTCGGTCTGGTCC
681 -CAGCATCTGCTGCCACAACCCTCGGTCCGATCC
*
14432117 GATCTTAGACT-AGAATAAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGT
1 GATCTTAGACTGAGAATAAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGT
14432181 GGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGATAGGGTGGTAGGTGGGTT
66 GGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGATAGGGTGGTAGGTGGGTT
*
14432246 TAGGCAAATCTTCAAATTTCTACGTGCCAATGCCATTTTTATGGCTTGCAAATTCATACAATGGT
131 TAGGCAAATCTTCAAATTTCTACGTGCCAATGCCATTTTTATGGCTTGCAAATGCATACAATGGT
* *
14432311 CCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCAAGATTTTTGA
196 CCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTCAAGATTTTCGA
** *
14432376 AAGCATTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCACCAAACTTGGTA
261 AA-CATTTTACGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTGTGGCACCAAACTTGGTA
* ** *
14432441 GACGTGATCCTTGCATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTTGAAGTGTACAG
325 GACATGATCCTTGCATTTTTGTTGGCATGCACAAAAA-ATTCAGCTAAAAACTCAAAGTGTACAA
*
14432506 GATTTTGTGACCATTTGAAAAACGTGTCGCC-ATTTCAAACACTTTAATGGCTACTGGCAACAAA
389 GATTTTGTGACCATTTGAAAAAAGTGTC-CCTATTTCAAACACTTTAATGGCTACTGGCAACAAA
* * *
14432570 CCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGG
453 CCTGTAAAATCTCAAAAGCTCTTTAAGGAGGTGTGAGTTCTCCAAGTTTGATGAGGGATAAGGGG
* * *
14432635 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
518 CCAATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGCACACCCCCCAGCCCCCCCA
* *
14432700 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACG
583 ATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACA
*
14432765 AAGAAAAATGTGGCACCAGCACATGCCCGAGACCAGCATCTGCTGCCACAACCCTCGGTCCGATC
648 AAGAAAAATGCGGCACCAGCACATGCCCGAGACCAGCATCTGCTGCCACAACCCTCGGTCCGATC
*
14432830 T
713 C
* * *
14432831 GATTTTAGACTGGGAATGAACTCCATATGC
1 GATCTTAGACTGAGAATAAACTCCATATGC
14432861 TTAGACATGG
Statistics
Matches: 1242, Mismatches: 167, Indels: 134
0.80 0.11 0.09
Matches are distributed among these distances:
696 1 0.00
697 27 0.02
702 3 0.00
704 3 0.00
706 2 0.00
707 1 0.00
710 5 0.00
711 40 0.03
712 108 0.09
713 98 0.08
714 326 0.26
715 25 0.02
716 13 0.01
717 13 0.01
718 17 0.01
719 2 0.00
720 199 0.16
721 185 0.15
722 48 0.04
723 2 0.00
725 1 0.00
726 3 0.00
727 4 0.00
730 2 0.00
731 3 0.00
733 4 0.00
734 1 0.00
735 4 0.00
737 1 0.00
740 16 0.01
741 85 0.07
ACGTcount: A:0.27, C:0.23, G:0.24, T:0.26
Consensus pattern (713 bp):
GATCTTAGACTGAGAATAAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGT
GGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGCGGATCGATAGGGTGGTAGGTGGGTT
TAGGCAAATCTTCAAATTTCTACGTGCCAATGCCATTTTTATGGCTTGCAAATGCATACAATGGT
CCCTTAACCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTCAAGATTTTCGA
AACATTTTACGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTGTGGCACCAAACTTGGTAG
ACATGATCCTTGCATTTTTGTTGGCATGCACAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAAACACTTTAATGGCTACTGGCAACAAACCT
GTAAAATCTCAAAAGCTCTTTAAGGAGGTGTGAGTTCTCCAAGTTTGATGAGGGATAAGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCAACGCACATCATGTGCGCACACCCCCCAGCCCCCCCAATC
GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACAAAG
AAAAATGCGGCACCAGCACATGCCCGAGACCAGCATCTGCTGCCACAACCCTCGGTCCGATCC
Found at i:14432872 original size:26 final size:26
Alignment explanation
Indices: 14432835--14432886 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14432825 CGATCTGATT
14432835 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTGGGAATGAACTCCATATGC
*
14432861 TTAGACAT-GGAATGAACTCCGTATGC
1 TTAGAC-TGGGAATGAACTCCATATGC
14432887 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.31, C:0.19, G:0.23, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCATATGC
Found at i:14434396 original size:713 final size:713
Alignment explanation
Indices: 14433004--14435219 Score: 3428
Period size: 713 Copynumber: 3.1 Consensus size: 713
14432994 GCCGCAACCT
* * * **
14433004 TCGGTCT-AGTCCGATCTTAGACTGGGAATGAACCCCGTATGCCTAAGCCAACTGACGAAATTAG
1 TCGGTCTGA-TCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAG
** * * * *
14433068 CGGGTGGGCGGGCAGGCACTACGCCGGCCAGAGAGAC-AGGATACGCAAGCCGTAGG-TCGATAG
65 CGGACGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGA-GATGCGCAAGCCG-CGGATCGATAG
***
14433131 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTCTGTGTGCCAATGCCATTTTTATGGCTTGT
128 GGTGGTAGGTGGGTTTAGGCACATCTTCATA-TTTCTACATGCCAATGCCATTTTTATGGCTTGT
* * *
14433196 AAATGCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGACTCGTTTTTTAT
192 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
14433261 TTTTCACGATTTTTGAAACCTTTTAAGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTG
257 TTTTCACGATTTTTGAAACATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTG
* *
14433326 ACCGCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGTTAAAA
322 GCC-CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
*
14433391 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAAGTGTCCCTATTTCAGACACTTTAAT
386 ACTCGAAGTGTACAAGATTTTGTGACCATTTG--AAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * *
14433456 GGCTACTGGCAACAAACCTGTAAAATCTCAAAAGCTCTTTAAGCGGGTGTGAGTTCTCCAA-TTT
449 GGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-CAAGGTT
*
14433520 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCAC
513 TGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCAC
14433585 ATCGCCCTAGCCCCCCGATGGTCGGAACCCCAATGCCGCCGGTGAGGTTCTCTGGCGATGCTCCG
578 ATCGCCCTAGCCCCCCGATGGTCGGAACCCCAATGCCGCCGGTGAGGTTCTCTGGCGATGCTCCG
14433650 GCGATGGTGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCACAACATGTGCTACTG
643 GCGATGGTGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCACAACATGTGCTACTG
14433715 CAATCC
708 CAATCC
*
14433721 TCGGTCTGATCCGATCTTAGACT-GGAATGAACTTCATATGCCTAAGCCAACCGACGAAACGAGC
1 TCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGC
14433785 GGACGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGCGGATCGATAGGGT
66 GGACGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGCGGATCGATAGGGT
*
14433850 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGCAAAT
131 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAAT
** ** *
14433915 TCATACAATGGTCCCTTAAGCCTTCACACGAAGTTTCATGGCAAGAAAACTCATTTTCTATTTTT
196 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * *
14433980 CAAGATTTTTGAAACATTTTACGGTTCGGGATTTTTTCAAATTTTTTCGGAAGGAGTTTTGGCAC
261 CACGATTTTTGAAACATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGC-C
* * * * *
14434045 CAAACTTGGTAGATGTGATCCTTGCATTTTTTTTGGCATGCACACAAACATTCAGCTAAAAACTC
325 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * * *
14434110 GAAGTGTACAAGATTTTGTGACCGTTTGAAAAACGTGTCCCCATTTCAAACACTTTAATGGCTAT
390 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
14434175 TGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
455 TGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
14434240 GGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACATCGCCC
520 GGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACATCGCCC
14434305 TAGCCCCCCGATGGTCGGAACCCCAATGCCGCCGGTGAGGTTCTCTGGCGATGCTCCGGCGATGG
585 TAGCCCCCCGATGGTCGGAACCCCAATGCCGCCGGTGAGGTTCTCTGGCGATGCTCCGGCGATGG
14434370 TGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCACAACATGTGCTACTGCAATCC
650 TGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCACAACATGTGCTACTGCAATCC
*
14434434 TCGGTCTGATCCGATCTTAGACT-GGAATGAACTTCATATGCCTAAGCCAACCGACGAAACGAGC
1 TCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGC
14434498 GGACGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGCGGATCGATAGGGT
66 GGACGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGCGGATCGATAGGGT
*
14434563 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTCATGGCTTGTAAAT
131 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAAT
* *
14434628 TCATAAAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
196 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * *
14434693 CACGATTTTTAAAATATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGCCC
261 CACGATTTTTGAAACATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTT-GGCC
* *
14434758 CAAACTTGGTAGACGTGATCCTT-TATTTTTGTTGGCATGCACAAAAAAATTCAACTGAAAACTC
325 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
*
14434822 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
390 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * * *
14434887 TGGCAGCAAACCTGTAAAATCTTAAATGATCTTTAAGGGGGTGTCAGTTCTCAAGGTTTGATGAG
455 TGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * * *
14434952 GGAT-AGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCC
520 GGATAAGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACATCGCC
** * * ** * *
14435016 CGGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTAAGGTTCTCTGTTGATGCTCTGGTGAT
584 CTAG-CCCCCCGATGGTCGGAACCCCAATGCCGCCGGTGAGGTTCTCTGGCGATGCTCCGGCGAT
** * * * * * *
14435081 GGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCTGAGCCCAACATGT-CT-GTCACAAC
648 GGTGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCACAACATGTGCTACT-GCAAT
14435144 CC
712 CC
* * * * * ** *
14435146 TCGGTCCGGTCTGATCTTAGACTGGGAATCAACTCCGTATGCCTAAGTTAACCCACGAAACGAGC
1 TCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGC
14435211 GTG-CGGGCG
66 G-GACGGGCG
14435220 CTCAGTTAGC
Statistics
Matches: 1380, Mismatches: 108, Indels: 26
0.91 0.07 0.02
Matches are distributed among these distances:
711 4 0.00
712 242 0.18
713 756 0.55
714 3 0.00
715 234 0.17
716 118 0.09
717 22 0.02
718 1 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (713 bp):
TCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGC
GGACGGGCGGTCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGCGGATCGATAGGGT
GGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAAT
TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
CACGATTTTTGAAACATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCC
AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
GATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACATCGCCCT
AGCCCCCCGATGGTCGGAACCCCAATGCCGCCGGTGAGGTTCTCTGGCGATGCTCCGGCGATGGT
GCCCCGGTGAAGAAAAATACGGCACCAGCACATGCCCGAGCACAACATGTGCTACTGCAATCC
Found at i:14436064 original size:26 final size:26
Alignment explanation
Indices: 14436028--14436080 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14436018 CTGATCTGAT
*
14436028 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14436054 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14436080 C
1 C
14436081 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14438302 original size:882 final size:860
Alignment explanation
Indices: 14434441--14438956 Score: 5154
Period size: 875 Copynumber: 5.2 Consensus size: 860
14434431 TCCTCGGTCT
* * *
14434441 GATCCGATCTTAGACT-GGAATGAACTTCATATGCCTAAGCCAACCGACGAAACGAGCGGACGGG
1 GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG-CGGG
* * *
14434505 CGGTCGGGCACTACGCCGGCCAGAGAGACGAGATGCGCAAGCCGCGGATCGATAGGGTGGTAGGT
65 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * *
14434570 GGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTCATGGCTTGTAAATTCATAAA
130 GGGTTTAGGCACATCTTCATATTT-TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* *
14434635 ATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
194 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTGTCACGATT
* * *
14434700 TTT-AAAATATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGCCCCAAACT
259 TTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCAAAACT
* * * *
14434764 TGGTAGACGTGATCCTT-TATTTTTGTTGGCATGCACAAAAAAATTCAACTGAAAACTCAAAGTG
323 TGGTAGACGTGATCCTTGTATTTTTGTTTGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
14434828 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
388 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
14434893 CAAACCTGTAAAATCTTAAATGATCTTTAAGGGGGTGTCAGTTCTCAAGGTTTGATGAGGGATAG
453 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAG
* * * *
14434958 GTGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGGCCC
518 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CGACC
*
14435023 CCCCGATCGTCGGAACCCCAATGCCGCCGGTAAGGTTCTCTGTTGATGCTCTGGTGATGGTGCCC
582 CCCCGATCGTCGG------AA--CC-CC---AA--TT-TC----G-T-C-CT-GCGATGGTGCCC
*** * * * *
14435088 CGACGAAGAAAAATATGGCACCAGCACATGCCTGAGCCCAACATGT-CTGTCACAACCCTCG---
624 CGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGACC
* * *
14435149 ---GTC-C-GGT--CT-G-AT-CTTAGACTGGGAATCAACTCCGTATGCCTAAGTTAACCCACGA
689 ATCGTCTCTGGTGACTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
* * ** * *
14435204 AACGAGCGTGCGGGCGCTCAGTTAGCCAGA-GGGCGGGATGCGCCAA-CCGGGGATCGATCGAGT
754 AATGAGCGTGTGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCG-CAAGCCGGGGATCGACCGGGT
* ** *
14435267 CCCCCTCTACGTGCTATCGATCCTGTTGC-CATAGCCC-TCAGTCC
818 CCCCCTCTGCGTGCTGCCGATCCTGTTGCACA-A-CCCTTGA-TCC
* * * *
14435311 GGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCTACCGACGAAACGAGCGAGCAGG
1 GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG-GCGGG
* * *
14435376 CGGGCAGGCAGACACTACGCCAGCCAGAGAGACGGGATGTGCAAGCCGTAGATCGATAGGGTGGT
65 CGGGC-GG--G-CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
14435441 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTCATGGCTTGTAAATTCA
126 AGGTGGGTTTAGGCACATCTTCATATTT-TGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * *
14435506 TAAAATTGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
190 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTGTCAC
* * *
14435571 GATTTTT-AAAATATTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGCCCCA
255 GATTTTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCAA
* * *
14435635 AACTTGGTAGACGTGATCCTT-TATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCAA
319 AACTTGGTAGACGTGATCCTTGTATTTTTGTTTGCATGCACAAAAAAATTCAGCTAAAAACTCGA
14435699 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
384 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * *
14435764 GCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTCGAGGTCTGATGAGGT
449 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG-
*
14435829 G-TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCTTC
513 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC--C
** ** * * *
14435893 GATCCTCGGAACCCCAATGATGTCGGTCAGGTTCTCCGGCAA-TGC-TTCGGCGATGGTGCCCCG
575 ---CC-C-G-ACCCC-CCGA--TC-GTC-GGAAC-CC--CAATTTCGTCCTGCGATGGTGCCCCG
* * * * * *
14435956 GCGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTAGCATGTGATGTCGCAACCTTCGATCTG
626 ACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGA-C-C
14436021 ATCTGATCTTAGACTGGGAATGGACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
689 ATC-G-TC-T---CT-GG--T-GACT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
14436086 TCAACCCATGAAATGAGCGTGTGGGCGCTCAGTCGGCCAGAGGGGTGGGATGCGCAAGCCGAGGA
743 TCAACCCATGAAATGAGCGTGTGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
* * * * * *
14436151 TCGATCGGGTCCCCCTCTACTTGCTACCGATCCTGTAGCCACAACCC-TCAGTCC
808 TCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGTTG-CACAACCCTTGA-TCC
* * * *
14436205 -AGTCCGATCTTAGACTAGGAATGAACTCCGTACGCCTAAGCCAATCGACGAAACGAGCGGACGG
1 GA-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG-CGG
* * * * * *
14436269 GTGGGCGGGCACTACGCCGGCAAAAGAGATGGGATGCGCAAGTCGTGGATCGATAGGGTGGTATG
64 GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* **
14436334 TGGGTTTAGGCACATCTTCATATTTTGCCTGCCAATGCCATTTTTATAACTTGTAAATTCATACA
129 TGGGTTTAGGCACATCTTCATATTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
** *
14436399 ACAGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATATT-TCACGAT
194 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT-TTGTCACGAT
* * *
14436463 TTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGGGTTTTGGCCC-AAACT
258 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCAAAACT
* * *
14436527 T-GTAGACGTGATCCTTGTATTTTT-TTTGGCATGCACAAAAAAAATCAGATGAAAAC-CTGAAG
323 TGGTAGACGTGATCCTTGTATTTTTGTTT-GCATGCACAAAAAAATTCAGCTAAAAACTC-GAAG
14436589 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
386 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
14436654 AGCAAACCTTTAAAATCTCAAATGCTCTTTAA-GGGTTGTGAGTTCTCAAGGTTTGATGAGGGAT
451 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT
* * * *
14436718 AGGGGGCCAATATAAGGGCCAAGTACTAGCACCAATCGCACATCATGTGCGCACA-CCCCTCGGC
516 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGAC
* * *
14436782 CCCCCAGATCGTCAGAACCCTAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGC
581 CCCCC-GATCGTC-G-----GAA---C-CC---CA-ATT-T-C------G-TCCTGCGATGGTGC
* * * *
14436847 CCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACTGCAACCCT---
622 CCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGA
*
14436909 -CA--GTC-C-GGT--CT-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAAT
687 CCATCGTCTCTGGTGACTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAT
* *
14436964 GAAATGAGCGTGTGGGCGCTTAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGG
752 GAAATGAGCGTGTGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGG
* * ** * * * *
14437029 TCCCCCTCTGCGTCCTGCCGATCTTGCTACCGCAACCCTCGGTCT
817 TCCCCCTCTGCGTGCTGCCGATCCTG-TTGCACAACCCTTGATCC
* * *
14437074 GGT-TCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGG
1 GATCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCGG
* *
14437138 GCGGACGGTCCGGCACTACGCC-GCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
64 GC-G--GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
14437202 TAGGTGGGTTTAGGCACATCTTCATATTTTGGCAAGCCAATGCCATTTTTATGGCTTGTAAATTC
125 TAGGTGGGTTTAGGCACATCTTCATATTTT-GCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
14437267 ATACAATGGTCCCTTAAGCCTTCACGTGACGTTTCATGGCAAGACAACTCGTTTTCTATTTGTCA
189 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTGTCA
* *
14437332 CGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTTGCCCAA
254 CGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCAA
* * *
14437397 AACTTGGTAGACATGGTCCTTGTATTTTTGTTTGCATGGA-AAAAAAATTCAGCTAAAAACTCGA
319 AACTTGGTAGACGTGATCCTTGTATTTTTGTTTGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* **
14437461 AGTGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTC-GAACACTTTTGTGGCTACT
384 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACT
*
14437525 GGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
448 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* *
14437590 GATAGGGGGCCAAGATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACACCCCC
513 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCC
* * * **
14437655 CGACTCTCCCGATCGTCGGAACCCCAATTTCGTCCTACGATGGTGCCTCGACGAAGAAAAATGTT
577 CGAC-CCCCCGATCGTCGGAACCCCAATTTCGTCCTGCGATGGTGCCCCGACGAAGAAAAATGCA
* * * *
14437720 GCCCCAGCCCATGCTCGAGCCCAGCATGTGCTGCCGTAACCCTCAGACCAATCTGATCTTAGACT
641 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GACC-ATC-G-TC-T---CT
* * * * *
14437785 AGGAATGAACTCCGTTTGCTTACACTGGGAATGAACTCCGTCTGCCTAAATCAAGCCATGAAATG
698 -GG--TG-ACT-CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATG
* * * *
14437850 AGCGTGTGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGCCAGGTCCCCC
758 AGCGTGTGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC
**
14437915 TCTGCGTGCTGCCGATCCTGTTGGTGCAACCCTTGATCC
823 TCTGCGTGCTGCCGATCCTGTT-GCACAACCCTTGATCC
*
14437954 GATCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGG
1 GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGC--G
* * * * *
14438019 CAGGCGGGTGGGCACTACACCGACCAGAGAGATGGGATCCGCAAGCCGTGGATCGATAGGGTGGT
63 --GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
14438084 AGGTGGGTTTAGGCACATCTTCAAATTTTGGCAAGCCAAAGCCATTTTTTATGGCTTGTAAATTC
126 AGGTGGGTTTAGGCACATCTTCATATTTT-GCATGCCAATGCCA-TTTTTATGGCTTGTAAATTC
14438149 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTGTCA
189 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTGTCA
* * * ** *
14438214 TGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCAAAAGGAGTTTTTGCCCAA
254 CGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCAA
* * *
14438279 AACTTGGTAGACATGGTCCTTGTATTTTTGTTTGCATGCAAAAAAAAAATTCAGCTAAAAACTCG
319 AACTTGGTAGACGTGATCCTTGTATTTTTGTTTGCATGC-ACAAAAAAATTCAGCTAAAAACTCG
* * **
14438344 AAGTGTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCGCATTTC-GAACACTTTTGTGGCTAC
383 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTAC
* * *
14438408 AGGCAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTC-GGGTTTGATGAG
447 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* *
14438472 GGATAGGGGGCCAATATAATGGCCAAGTACCAGCACCAATCGCACATCATGTGCGCACA--CCCC
512 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * * ** *
14438535 CGGCGCCCCCAATCG-CAGG-ACCCCAATGTCGTCCGGCGATGGTGCCACGGTGAAGAAAAATAC
577 CGAC-CCCCCGATCGTC-GGAACCCCAATTTCGTCCTGCGATGGTGCCCCGACGAAGAAAAATGC
* * * *
14438598 AGCACTAGCACATGCCCGACCCCAGCGTGTGCTGTCGCAACCCTCG------G--TCTGGT--CT
640 AGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGACCATCGTCTCTGGTGACT
* * *
14438653 -G-AT-CTTAGAATTGGG-ATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGT-TCGGG
705 CGTATGCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGT-GGG
* * ** *
14438713 TGCTCAG-CTGGCTAGAGATGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGC
768 CGCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGC
* * * *
14438777 TGCCGATCCTGCTGTCACAACCCTCGGTCT
832 TGCCGATCCTGTTG-CACAACCCTTGATCC
* * * * *
14438807 GGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAATCCAACCGATGGAACGA---GCGGGC
1 GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGC
* *
14438869 GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTG
66 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
14438934 GGTTTAGGCACATCTTCATATTT
131 GGTTTAGGCACATCTTCATATTT
14438957 CAGTGAGCAA
Statistics
Matches: 3198, Mismatches: 303, Indels: 315
0.84 0.08 0.08
Matches are distributed among these distances:
845 83 0.03
847 1 0.00
849 2 0.00
852 3 0.00
853 169 0.05
854 70 0.02
855 2 0.00
857 2 0.00
859 1 0.00
860 2 0.00
861 1 0.00
862 3 0.00
863 5 0.00
864 4 0.00
866 51 0.02
867 15 0.00
868 1 0.00
869 185 0.06
870 22 0.01
871 52 0.02
872 74 0.02
873 162 0.05
874 123 0.04
875 595 0.19
876 13 0.00
877 22 0.01
878 10 0.00
879 78 0.02
880 216 0.07
881 87 0.03
882 189 0.06
883 76 0.02
884 142 0.04
885 5 0.00
886 5 0.00
887 101 0.03
888 137 0.04
889 145 0.05
890 79 0.02
891 2 0.00
892 2 0.00
893 72 0.02
894 119 0.04
895 68 0.02
896 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (860 bp):
GATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCGGGC
GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTGTCACGATTTT
TGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCAAAACTTGG
TAGACGTGATCCTTGTATTTTTGTTTGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCC
GATCGTCGGAACCCCAATTTCGTCCTGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCAC
ATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGACCATCGTCTCTGGTGACTCGTATGCTTAG
ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGTGGGCGCTCAGTCGGCC
AGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGTTG
CACAACCCTTGATCC
Found at i:14439437 original size:26 final size:26
Alignment explanation
Indices: 14439401--14439450 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14439391 CCAGTCCGAT
*
14439401 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14439427 CTTAGACTGGGAATGAACTCCGTA
1 CTTAGACTGGGAATGAACTCCGTA
14439451 CGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14440329 original size:26 final size:26
Alignment explanation
Indices: 14440291--14440343 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14440281 CTAGTCCGTT
* *
14440291 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14440317 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14440343 C
1 C
14440344 CTAAGCCAAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14440828 original size:26 final size:26
Alignment explanation
Indices: 14440799--14440851 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14440789 CCAGTCCGAT
14440799 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
*
14440825 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
14440851 C
1 C
14440852 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:14441753 original size:26 final size:26
Alignment explanation
Indices: 14441702--14441754 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14441692 CTGGTCTGAT
* *
14441702 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14441728 CTTAGACTAGGAATGAACTCCTTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14441754 C
1 C
14441755 CTAGGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14442794 original size:904 final size:901
Alignment explanation
Indices: 14440515--14442782 Score: 3319
Period size: 904 Copynumber: 2.5 Consensus size: 901
14440505 CAATGGTCCC
* *
14440515 TTAATGGCTACTGGCAGCAAACCTGTATAATCTCAAATGCTATTTAAGGGGGTGTGAGTTCTCGA
1 TTAATGGCTACTGGCAGC-AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* *
14440580 GGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGT
65 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
14440645 GCACACCCTCCC-GTCCCCCGATCGGCGAAACCCCAATGCCGCCGGTCAGCTTCTCCGGCGATGC
130 GCACACCCCCCCGGCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGC
* ** *
14440709 TCCGGCGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCT
195 TCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
14440774 GCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAAT
260 GCCGCAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAAT
* *
14440839 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCTGACCAGAGGGGCG
325 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACTGGCCAGAGGGGCG
* * * *
14440904 GGATGCACAAGCCGGGGATCGGCT-AGGTCCCCCTCTGCGTGCTACCGATCCTGGTGCCGTAACC
390 GGATGCGCAAGCCGGGGATCGGCTGA-GTCCCCCTCTGCGTGCTATCGATCCTGCTGCAGTAACC
* ** * * * *
14440968 CTTGGTTTGATCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACAGATGAAACGAG
454 CTCGGTCCGATCTGATCTTAGACTAGGAATGAAATCCGTATGCCTAAGCCAACAGACGAAACGAG
* * * * *
14441033 CGGGCAGGTAGGCGGGCGGGCACTACGCTGGCTAAAGAGACGAGATACGTAAGCCGTGGGTCGAT
519 CAGGCAGGCAGGCGGGCGGGCACTACGCCGGCTAAAGAGACGAGATACGCAAGCCGTGGATCGAT
14441098 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTTGGCTTGT
584 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTTGGCTTGT
14441163 AAATTCATACAATCATCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
649 AAATTCATACAATCATCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* *
14441228 TTTTCACGATTTTCAAAACTTTTTGCAGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG
714 TTTTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG
*
14441293 GCCCCAAACTTGGTAGACGTGAGCCTTGTATTTTTGTTGGCATACACAAAAAAAGTCAGCTAAAA
779 GCCCCAAACTTGGTAGACGTGAGCCTTGTATTTTTATTGGCATACACAAAAAAAGTCAGCTAAAA
*
14441358 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
844 ACTCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
14441416 TTAATAGCTACTGGCAGCGAACCAGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGA
1 TTAATGGCTACTGGCAGC-AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
*
14441481 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGC
65 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * * * *
14441546 GCACACCACCCCGACCCCCCCAATCTCTGAAACCCCAATGCCGTCGATCAGGTTCTCCGGCGATG
130 GCACACCCCCCCG-GCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * *
14441611 CTCCGACGATGGTGCCCCGATGAAGAAAAATACAGCACCAGCACATGCCCGAGCCTAGCATTTGC
194 CTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
14441676 GGCCGCAACCCTCGGT-CTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTAGGA
259 TGCCGCAACCCTCGGTCCAGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
* * * * *
14441740 ATGAACTCCTTATGCCTAGGTCAACCCACGAAATGAGCGTGAGGGCGCTCAACTGGCCAGAGGAG
323 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACTGGCCAGAGGGG
* ** * * * * * *
14441805 CGGGTTGCGCAAGTTGGGGATC-GATCGGGTCCCCCTCTGTGTGCTGTCGATCCTGCTACAGCAA
388 CGGGATGCGCAAGCCGGGGATCGGCT-GAGTCCCCCTCTGCGTGCTATCGATCCTGCTGCAGTAA
* * *
14441869 CTCTCGATCCGATCTGATCTTAGACTAGGAATGAAATCCGTATGCCTAAGCCAACCGACGAAACG
452 CCCTCGGTCCGATCTGATCTTAGACTAGGAATGAAATCCGTATGCCTAAGCCAACAGACGAAACG
* * * * * *
14441934 AGCAGGCGGGCGGGGGGGCGGGCACTACGCCGG-TCATAGAGACGGGATGCGCAAGCCGTGGATC
517 AGCAGGCAGGCAGGCGGGCGGGCACTACGCCGGCT-AAAGAGACGAGATACGCAAGCCGTGGATC
*
14441998 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTCTGCATGCGAATGCCATTTTTATGG
581 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTT-TGCATGCCAATGCCATTTTT-TGG
* **
14442063 CTTGTAAATTCATACACTGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
644 CTTGTAAATTCATACAATCATCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** * *
14442128 TCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTTC-GAAGGA
709 TCTATTTTTCACGATTTTCAAAACTTTTTACAGTTCGGGA-TTTTTTAAAATTTTTTCGGAAGGA
* * *
14442192 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCA-AAAATAAATTCA
773 GTTTTGGCCCCAAACTTGGTAGACGTGAGCCTTGTATTTTTATTGGCATACACAAAA-AAAGTCA
* *
14442256 GCTAAAAACTCGAAGTGTACAAGATTTTGTAACCTTTTG-AAAAAGTGTCCCCATTTTAGACACT
837 GCTAAAAACTCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
14442320 TTAATGGCTACTGGCAGCAATCCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
1 TTAATGGCTACTGGCAGCAA-CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
** * *
14442385 GGTTTGATGAGGGATAGGGGGTGAATATAAGGGTCAAGTACCAGCACCCATGGCACATCATGTGC
65 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
** * *
14442450 AAACACCCCCCCGGCCCCCTCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCAGTGATG
130 GCACACCCCCCCGGCCCCC-CGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATG
* * * * *
14442515 CCCCAATGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGTACAAGCCCGAGCCCAGCATGTGC
194 CTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * *
14442580 TGCCGTAACCTTCGGTCCAATTCGATCTTGGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
259 TGCCGCAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAA
*
14442645 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGC
324 TGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACTGGCCAGAGGGGC
* * * *
14442710 GGGATGCGCAAGCCGAGGATCGGCTGAGTCCCCCTCTACGTGCTATCGATCCTACTGCTGTAACC
389 GGGATGCGCAAGCCGGGGATCGGCTGAGTCCCCCTCTGCGTGCTATCGATCCTGCTGCAGTAACC
14442775 CTCGGTCC
454 CTCGGTCC
14442783 AGTTTGATCT
Statistics
Matches: 1200, Mismatches: 153, Indels: 25
0.87 0.11 0.02
Matches are distributed among these distances:
901 131 0.11
902 6 0.00
903 410 0.34
904 435 0.36
905 202 0.17
906 16 0.01
ACGTcount: A:0.25, C:0.25, G:0.26, T:0.25
Consensus pattern (901 bp):
TTAATGGCTACTGGCAGCAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCCCGGCCCCCCGATCGCCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCT
CCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGGTCCAGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACTGGCCAGAGGGGCGG
GATGCGCAAGCCGGGGATCGGCTGAGTCCCCCTCTGCGTGCTATCGATCCTGCTGCAGTAACCCT
CGGTCCGATCTGATCTTAGACTAGGAATGAAATCCGTATGCCTAAGCCAACAGACGAAACGAGCA
GGCAGGCAGGCGGGCGGGCACTACGCCGGCTAAAGAGACGAGATACGCAAGCCGTGGATCGATAG
GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTTGGCTTGTAA
ATTCATACAATCATCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCACGATTTTCAAAACTTTTTACAGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
CCCAAACTTGGTAGACGTGAGCCTTGTATTTTTATTGGCATACACAAAAAAAGTCAGCTAAAAAC
TCGAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
Found at i:14445011 original size:903 final size:904
Alignment explanation
Indices: 14443326--14446897 Score: 5836
Period size: 912 Copynumber: 3.9 Consensus size: 904
14443316 CCGGTCTGAT
* * * * * * * **
14443326 CTTAGA-TGGGAATGAACTCCGTATGTCTAAGTCAAACCACGAAACGAGCGTACGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
* * * * *
14443390 CAGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGG-CTGGTCCCCCTTTACGTGCTGCTGATCC
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * * * * * * *
14443454 TGTTACCGCAACCCTCGATTTGGTCTGATCTTAGACTGGGAATGAACTCCATATGTCTAAGCCAA
131 TGCTACCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAGCCAA
* * * * * ** ** * *
14443519 CCGACGACACGAACAGGTGTGCAGGCGGGTGGGCGGGCAGAACGCCGGCCAGAGAGACGGGATGC
196 CCGACGAAACGAGCAGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGACAGGATGC
** * * * * *
14443584 GTAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACGTGCCAAT
261 ACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCGAT
14443649 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTTTCATGGCA
326 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTTTCATGGCA
* *
14443714 AGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATT
391 AGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* *
14443779 TTTTCGGAAAACGTTTTGGCCCCAAACTTGGTAGACATGATCCTTATATTTTTTTTGGCATTAAA
456 TTTTCGAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTGGCATT-AA
*
14443844 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCAT
520 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
14443909 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATGTCAAATGCTCTCTAAGGGGGTGT
585 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
14443974 GAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
650 GAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
14444039 CATAATGTGCGCACACCCCCCTGGCCCCCCAATCGCTGGAACCCCAATGCCGCCGGTCAGGTTCT
715 CATCATGTGCGCACACCCCCC-GGCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGGTTCT
14444104 CCAGCGATGCTCCGGTGATGGTACCCCGACGAAG-AAAATGTGGCACCAGCACATTCTCGAGCCC
779 CCAGCGATGCTCCGGTGATGGTACCCCGACGAAGAAAAATGTGGCACCAGCACATTCTCGAGCCC
14444168 AGCATGTGCTGTCGCAACCCTCGATCTAGTTCGATCTTCAACTGGGAATGAACTCGGTATG
844 AGCATGTGCTGTCGCAACCCTCGATCTAGTTCGATCTTCAACTGGGAATGAACTCGGTATG
14444229 CTTAGACTGGGAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
*
14444294 CAGCCAGAGGGACGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
*
14444359 TGCTGCCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAGCCAA
*
14444424 CCGACGAAACGAGCGGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGACAGGATGC
196 CCGACGAAACGAGCAGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGACAGGATGC
14444489 ACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCGAT
261 ACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCGAT
*
14444554 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGTGTTCACGTGAAGTTTCATGGCA
326 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTTTCATGGCA
14444619 AGATGACTCATTTTCTATTTTTCATGATTTTCAAAA-TTTTTACGGTTCGGGATTTTTTAAAATT
391 AGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
*
14444683 TTTTCGAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTAGCATTAAA
456 TTTTCGAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTGGCATTAAA
*
14444748 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATT
521 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
14444813 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
586 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
14444878 AGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
651 AGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
14444943 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGGTTCTC
716 ATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGGTTCTC
*
14445008 CAGCGATGCTCCGGTGATGGTACCCCGACGAAGAAAAATGTGGCACCAGCACATTCTTGAGCCCA
780 CAGCGATGCTCCGGTGATGGTACCCCGACGAAGAAAAATGTGGCACCAGCACATTCTCGAGCCCA
*
14445073 GCATGTGCTGTCACAACCCTCGATCTAGTTCGATCTTCAACTGGGAATGAACTCGGTATG
845 GCATGTGCTGTCGCAACCCTCGATCTAGTTCGATCTTCAACTGGGAATGAACTCGGTATG
*
14445133 CTTAGACTGGAAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
14445198 CAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* **
14445263 TGCTGCCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTTTGTATGCCTAAGCCAA
131 TGCTACCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAGCCAA
*
14445328 CCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGA
196 CCGACGAAACGA--------GCAGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGA
*
14445393 CAAGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
253 CAGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
14445458 ATGCCGATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCCTTAAGTGTTCACGTGAAGTT
318 ATGCCGATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTT
**
14445523 TCATGGCAAGATGACTCATTTTCTATTTTTCATGATTTTCAAAA-TTTTTACGGTTCCAGATTTT
383 TCATGGCAAGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTT
14445587 TTAAAATTTTTTCGAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTG
448 TTAAAATTTTTTCGAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTG
14445652 GCATTAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
513 GCATTAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
14445717 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
578 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
14445782 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACC
643 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACC
14445847 CATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTC
708 CATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGCTGGAACCCCAATGCCGCCGGTC
* * * * *
14445912 AGGTTCTCCAGCGATGCTTCGGTGATGGTGCCCCGATGAAGAAAAATGCGGCAGCAGCACATTCT
772 AGGTTCTCCAGCGATGCTCCGGTGATGGTACCCCGACGAAGAAAAATGTGGCACCAGCACATTCT
* * *
14445977 CGAGCCCAGCATGTGCTGTCGCAACCCTTGATCTAGTTTGATCTTCAACTGGGAATGAACTCCGT
837 CGAGCCCAGCATGTGCTGTCGCAACCCTCGATCTAGTTCGATCTTCAACTGGGAATGAACTCGGT
14446042 ATG
902 ATG
* * * *
14446045 CTTAGACTGGGAATAAACTCTGTATGCCTAAGTTAACCCACGAAACGAGCCTGAGGGTGCTCAGT
1 CTTAGACTGGGAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
* *
14446110 CAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATAC
66 CAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
* * *
14446175 TGCTACCACAACCTTCGGTTTGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAACCAA
131 TGCTACCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAGCCAA
* * *
14446240 CCGACGAAACGAGCAGGCGGGCCGACGGGCA----GGCATTACGTCGGCTAGAGAGACAGGATGC
196 CCGACGAAACGAGCAGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGACAGGATGC
* *
14446301 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCTTGCCGAT
261 ACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCGAT
* *
14446366 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCA
326 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTTTCATGGCA
* *
14446431 AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
391 AGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * **
14446496 TTTTCGGAAAGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCACGCA
456 TTTTC-GAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTGGCA--TT
*
14446560 AAAAAAAATTCAGCTAAAAACTCTAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
518 AAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* *
14446625 ATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGT
583 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * ** *
14446689 GTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAATAGGAGCACCAATCG
648 GTGAGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * * *
14446754 CACATCGA-GTGCGCACACCGGCCCTGGCCCCCCGATCGCCGAAACCCTAATGCCGCCCGTTAGG
713 CACATC-ATGTGCGCACACC--CCCCGGCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGG
* * * * *
14446818 TTCTCCAGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGA
775 TTCTCCAGCGATGCTCCGGTGATGGTACCCCGACGAAGAAAAATGTGGCACCAGCACATTCTCGA
*
14446883 GCCCAGTATGTGCTG
840 GCCCAGCATGTGCTG
14446898 CCACAACCTT
Statistics
Matches: 2517, Mismatches: 133, Indels: 38
0.94 0.05 0.01
Matches are distributed among these distances:
900 186 0.07
901 78 0.03
902 88 0.03
903 518 0.21
904 481 0.19
905 291 0.12
912 875 0.35
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (904 bp):
CTTAGACTGGGAATGAACTCTGTATGGCTAAGTTAACCCACGAAACGAGCATGCGGGTGCTCAGT
CAGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCCCCCTCTACGTGCTGCCGATCC
TGCTACCACAACCCTCGGTTCGGTCTGATCTTAGAATGAGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCAGGCGGGCGGGCGGGCAGGCGGGCATTACGCCGGCTAGAGAGACAGGATGC
ACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCGAT
GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTTTCATGGCA
AGATGACTCATTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
TTTTCGAAAAACGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTGGCATTAAA
AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
AGTTCTCGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
ATCATGTGCGCACACCCCCCGGCCCCCCGATCGCTGGAACCCCAATGCCGCCGGTCAGGTTCTCC
AGCGATGCTCCGGTGATGGTACCCCGACGAAGAAAAATGTGGCACCAGCACATTCTCGAGCCCAG
CATGTGCTGTCGCAACCCTCGATCTAGTTCGATCTTCAACTGGGAATGAACTCGGTATG
Found at i:14445349 original size:4 final size:4
Alignment explanation
Indices: 14445340--14445373 Score: 59
Period size: 4 Copynumber: 8.5 Consensus size: 4
14445330 GACGAAACGA
*
14445340 GCGG GCGG GCGG GCGG GCGG GCGG GCAG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GCGG GC
14445374 ATTACGCCGG
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
4 28 1.00
ACGTcount: A:0.03, C:0.26, G:0.71, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:14447254 original size:26 final size:26
Alignment explanation
Indices: 14447203--14447255 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14447193 CCAGTCCGAT
*
14447203 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
14447229 CTTAGACTTGGAATGAACTCTATATG
1 CTTAGACTAGGAATGAACTCCATATG
14447255 C
1 C
14447256 GTAATTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:14448141 original size:26 final size:26
Alignment explanation
Indices: 14448103--14448154 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
14448093 TGGTCTGATT
*
14448103 TTAGGCTGAGAATGAACTCCGTATGC
1 TTAGACTGAGAATGAACTCCGTATGC
*
14448129 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGAGAATGAACTCCGTATGC
14448155 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGAGAATGAACTCCGTATGC
Found at i:14449681 original size:870 final size:878
Alignment explanation
Indices: 14447381--14450267 Score: 3542
Period size: 871 Copynumber: 3.3 Consensus size: 878
14447371 ATCCTGTCTG
* * * *
14447381 ATCTTAGACTGAGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACTAGCGGGCGGGTGGGCG
1 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATG-AAC-AGCGGACGGG-GGGC-
14447446 AGTAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
62 -G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
14447511 GTTTAGGCACATCTTCATTTTTCTACTTGCCAATGCCATTTTTATGGCTTGTAAATTCTTACAAT
124 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
14447576 AGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACAATTTT
189 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * *
14447641 TGAAACTTTTTAGGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGACCCCAAACTTGG
254 TGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTG-GCCCAAACTTGG
* * * * * *
14447706 TAGATGTAATCCTTGTATTTTTTTTGGCGTGCACAAAAAATTTTAGCTAAAAACTCCAAGTGTAC
318 TAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
** * * *
14447771 AAGATTTTGTGACCATTTGAAAAAAGTGTTTCCATTTTAGACACTTTAATGGCAATTGGTAGCAA
383 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAA
* * *
14447836 AACTGTAAAATCTCAAATGCTCTTTAAGTGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGG
448 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * *
14447901 GACAATATAAGGGCCAAGTACCAGCACCCATTGCACATCGTGTGCGCACACCGCCCC-GACCCCC
513 GCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCACCCCGGCCCCCC
* * * ** *
14447965 TCGATCGCCGAAACCCCAATGCCGCTGGTTAGGTTCTCCGGTGATGCTCCGGTGATGGTGCCCCG
578 T-GATCGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCG
* * * *
14448030 GTGAAGAAAAATGTGGTACCAGCACATGCCCGAGCCCAGTATGTGCTGCCACAACCCTCGGTCTG
642 ATGAAGAAAAATGCGGCACCAGCACATGCCCGAG-CCAGCATGTGCTGCCACAACCCTC-GTCT-
14448095 GTCTGATTTTAGGCTGAGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
704 G--TG---TTA--C-----ATGAACTCCGTATGCTTAGACTGGG-A-GAACTCCGTATGCCTAAG
* * * * * * *
14448160 TCAACCCACGAAACGGGTGTACGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCCCAAGCCGGGGA
755 TCAACCCACGAAACGAGCGTGCGGG-ACTCCGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGA
* * * * *
14448225 TCGATCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCGCAACCCTTGGTCTGGTCCA
819 TCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTACCGCAACCCTCGGTCTGGTCCA
* * * * *
14448285 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGAAGAA-A--TGA--GCGGGCGGGC
1 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAACAGCGGACGGGGGGCGGGC
* * * *
14448345 ACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGAATCAATAGCGTGGTAGGTGGGTTTAGG
66 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
14448410 -----C--CA-A----T---T-----T--CATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
131 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * * ** *
14448453 TAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCACGATTTTTTATCCC
196 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
* *
14448518 TTTTGCGGTTCGGGATTTTTTGAAAATTTTTTC-AGAAGGAGTTTTGGCCCTAAACTTGGTAGAT
261 TTTTACGGTTCAGGATTTTTT-AAAATTTTTTCGA-AAGGAGTTTTGGCCC-AAACTTGGTAGAT
* *
14448582 GTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGAT
323 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* * *
14448647 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTATACACTTTAATGGCTACTAGCAGAAAACCTG
388 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTG
* * *
14448712 TAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGAAGAGGGATAGGGGGCCAA
453 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
*
14448777 TATAAGGGCCAAGTACCAGCACCCATTGCACATCATTTGCGCACACCACCCCGGCCCCCCTGATC
518 TATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCACCCCGGCCCCCCTGATC
* *
14448842 ATCGGAACCCCAATGCCACCGGTTAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAG
583 GTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAG
**
14448907 AAAAATGCGGCACCAGCACATGCTTGAGCCTAGCATGTGCTGCCACAA-CC-C-TC-G-G-T-C-
648 AAAAATGCGGCACCAGCACATGCCCGAGCC-AGCATGTGCTGCCACAACCCTCGTCTGTGTTACA
*
14448964 TG-A-TCCG-AT-CTTAGACT-GG-GAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGC
712 TGAACTCCGTATGCTTAGACTGGGAGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
*
14449023 GGGCACTCCGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATAGGTCGGGTCCCCCTCTGCGT
777 GGG-ACTCCGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGT
** *
14449088 GCTGTCGATCCTACTTTCGCAACCCTCGGTCCGGTCCA
841 GCTGTCGATCCTACTACCGCAACCCTCGGTCTGGTCCA
* * *
14449126 ATCTTAGACTGGGAATGAACTTTGTATGCCTAAACCAATCGATGAAACAGGCGGACGGGAGGGCG
1 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATG-AACA-GCGGACGGG-GGGCG
* * *
14449191 GGCACTACGCCAGCCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
63 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
*
14449256 AGGCACATCTTCATATTTCTGCATGCCAATGCCACTTTTATGGCTTGTAAATTCATACAATGGTC
128 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * *
14449321 CCATAGGCCTTCACGTGAAGTTTCATGGTAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
193 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* * *
14449386 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGAAATGATTTTTGGTCCCAAGCTTGGTAGA
258 ACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGG-CCCAAACTTGGTAGA
** *
14449451 CATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAATA
322 TGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
14449516 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCT
387 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCT
*
14449581 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCA
452 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
** *
14449646 ATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCCCTGA
517 ATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCACCCCGG-CCCCCCTGA
* * * *
14449711 TCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCGACGATGATCCGACGATGGTGCCCCGATGA
581 TCGTCGGAACCCCAATGCCGCCGGTTAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGA
* * **
14449776 AGAAAAATACGGCATCAGCACATGCCCGAGGCCAGCATGTGCTGCTGCAACCCTCGGTCTGATCT
646 AGAAAAATGCGGCACCAGCACATGCCCGA-GCCAGCATGTGCTGCCACAACCCTC-GTCTG---T
*
14449841 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAA
706 G---TT--AC-----ATGAACTCCGTATGCTTAGACTGGG-A-GAACTCCGTATGCCTAAGTCAA
* ** ** *
14449906 CCCACGAAACGAGCGTGCAGGTTTCCAGTCGGCCAGAGGGGCGGGATGCGTAAGCCGGGTATCGG
759 CCCACGAAACGAGCGTGCGGGACTCC-GTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGG
* ** * * * * * **
14449971 TCGAGTCTTCCTTTGCGTGTTGTCGATCCTACTACCGTAACCCTCAGTCTGATCTG
823 TCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTACCGCAACCCTCGGTCTGGTCCA
* * *
14450027 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACAAAATGAACGGGTGGACGGGTG
1 ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCG-----ATGAAC-AGCGGACGGGGG
* *
14450092 GCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCG--A------TA---GGG
60 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
14450146 TTTAGGCACATTTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
125 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
14450211 GTCCCTTAAGCCTTTATGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCA
190 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
14450268 TGGCATGTGC
Statistics
Matches: 1720, Mismatches: 187, Indels: 163
0.83 0.09 0.08
Matches are distributed among these distances:
841 164 0.10
842 2 0.00
843 1 0.00
844 2 0.00
845 8 0.00
846 4 0.00
847 4 0.00
848 2 0.00
849 68 0.04
854 1 0.00
855 1 0.00
856 2 0.00
857 1 0.00
858 1 0.00
861 1 0.00
862 1 0.00
864 1 0.00
865 1 0.00
867 2 0.00
869 2 0.00
870 382 0.22
871 577 0.34
872 13 0.01
873 1 0.00
875 2 0.00
876 1 0.00
877 1 0.00
880 2 0.00
884 1 0.00
885 2 0.00
887 2 0.00
892 64 0.04
893 118 0.07
894 2 0.00
895 4 0.00
896 8 0.00
897 9 0.01
898 2 0.00
899 1 0.00
900 3 0.00
901 156 0.09
902 1 0.00
903 2 0.00
904 83 0.05
905 11 0.01
906 3 0.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (878 bp):
ATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAACAGCGGACGGGGGGCGGGC
ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACT
TTTTACGGTTCAGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCAAACTTGGTAGATGTG
ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
GTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
AAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCACCCCGGCCCCCCTGATCGTC
GGAACCCCAATGCCGCCGGTTAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAA
AATGCGGCACCAGCACATGCCCGAGCCAGCATGTGCTGCCACAACCCTCGTCTGTGTTACATGAA
CTCCGTATGCTTAGACTGGGAGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGA
CTCCGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGT
CGATCCTACTACCGCAACCCTCGGTCTGGTCCA
Found at i:14449880 original size:26 final size:26
Alignment explanation
Indices: 14449844--14449896 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14449834 CTGATCTGAT
14449844 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
14449870 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14449896 C
1 C
14449897 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14455907 original size:26 final size:26
Alignment explanation
Indices: 14455871--14455923 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
14455861 CTGGTCCAAT
14455871 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14455897 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
14455923 C
1 C
14455924 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:14457684 original size:26 final size:26
Alignment explanation
Indices: 14457648--14457697 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
14457638 GTCTGATCTT
*
14457648 AGACTAGGAATGAACTCCTTATGCTC
1 AGACTAGGAATGAACTCCGTATGCTC
14457674 AGACTAGGAATGAACTCCGTATGC
1 AGACTAGGAATGAACTCCGTATGC
14457698 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.22, G:0.22, T:0.24
Consensus pattern (26 bp):
AGACTAGGAATGAACTCCGTATGCTC
Found at i:14458591 original size:26 final size:26
Alignment explanation
Indices: 14458547--14458599 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
14458537 CCGGTCCGAT
*
14458547 CTTAGACTGGGAACGAACTCCATATG
1 CTTAGACTGAGAACGAACTCCATATG
** *
14458573 CTTAGACTGAGAATTAACTCCGTATG
1 CTTAGACTGAGAACGAACTCCATATG
14458599 C
1 C
14458600 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAACGAACTCCATATG
Found at i:14458673 original size:902 final size:900
Alignment explanation
Indices: 14456769--14469465 Score: 15895
Period size: 904 Copynumber: 14.2 Consensus size: 900
14456759 CGGTCCGATC
* * *
14456769 CTTAGTACTGGG-ATGAACTCCGTAT-CCTAAGTTAACCC-CGAAACCAGCATGCGGGCTGCTCA
1 CTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GCTCA
* * * * * * * *
14456831 ACTGGCTAGAGGGGCTGGGATTGGCGCAAGCCGAGGATCCGATCGGGTCCCTCTTCTGTGTGCTA
64 GCCGGCCAGAGGGGC-GGGA-T-GCGCAAGCCGGGGAT-CGGTCGGGTCCC-CCTCTGCGTGCTG
* * * * * * *
14456896 CCGATCCTACTACCACAACCCTCAGGTCTGATCTGATCTTGGACTGGGAATGAACTCTGTATGCC
124 TCGATCCTGCTACCGCAACCCTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
14456961 TAAGCCAACTGACGAAACGAGC--G-GA-CGGGTGAGCACTACGTCGGCCAAAGAGACGGGATGC
188 TAAGCCAACCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* * * ** *
14457022 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTTATATTTTTGTGTGTCAAT
253 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
* *
14457087 GCCATTTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCA
318 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * *
14457152 AGACTACTCGTTTTTTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCAGGATTTTTTAAAATT
383 AGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* *
14457217 TTTTCGGAAGGAGTTTTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTT-TTTGGCGTGCA
448 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCA
*
14457281 CAAAAAAATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
513 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * * *
14457346 ATTTCAGACCCTTTAATTGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAAGGGGT
578 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * **
14457411 GTCCA-TTCTGGAGGTTTGATGAGGGATAGGGGGCCAATATAAAAGCCAAGTACCAGCACCCATC
643 GT-GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * * **
14457475 GCACATCATGTGTGCACACCCCCCTGGCCCCCCCAATTGTCAGAACCCCAATGCCACCGGTCAGG
707 GCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGG
* ** *
14457540 TTCTCCGACGATGCTCCGACGATGGTGCCCCCGATGAAGAAAAATGCGGCAATAGCACATGCCTG
771 TTCTCCGACGATGCTCCGACGATGGTG-CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * * * *
14457605 ACCCCATCATGTGCTGCCGCAACCCTCAGTCCAGTCTGATCTTAGACTAGGAATGAACTCCTTAT
835 AGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATAT
14457670 G
900 G
* * *
14457671 CTCAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
14457736 CGGCCAGAGGGGCAGGATGCGCAAGCTGAGGATCGGTCGGGTCCCCCTCTACGTGCTATCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
14457801 TGCTACTGCAACCCTTGGTCTGGTCTGATGTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14457866 CTGACGAAACGAGCGGGCGAGTGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
14457931 TGGATCGATAGGGTGGTAGGTGGGGTATAGGAACATCTTCATATTTCTGCATGTCAATGCCATTT
261 TGGATCGATAGGGTGGTAGGT-GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * *
14457996 TTGTGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14458061 TCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTATGGTTCGGGATTTTTTTTAAAATTTTTCC
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGA--TTTTTTAAAATTTTTTC
* * * * *
14458126 TGAAGGATTTTTGGCCCCAAACTTGGTAGACATCATCCTTGTATTTTTGTTTGG-TTGCACAAAA
453 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAA
14458190 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
518 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
14458255 AAACACTTTAATGGCTACAGGCAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAG
583 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * * *
14458320 TTCTCAAGGATTAATGAGGGGTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
648 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
14458385 CATGTGCGCACACCCCCCGGCCCCCCCAATCGCCGGAACCCCAATGCCGTCAGTCAGGTTCTCCG
713 CATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* *
14458450 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGTACATGCCCGAGCCCAGC
778 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
14458515 ATGTGCTGCCGCAACCCGCGGTCCGGTCCGATCTTAGACTGGGAACGAACTCCATATG
843 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* *
14458573 CTTAGACTGAGAATTAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
14458638 CGGCCAGAGGGGCGAGATGCGTAAGCCGGGGATCGGTCGGGTCCCCTTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
14458703 TGCTGCTGCAACCCTCAGTCTGGTCTGATCTTAGACCGGGAATGAACTCCGTATGCCCCCCCCTT
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG------CC-T
* ** * * * * *
14458768 AAAGGCCCCAACCCCGAACAAAAAAACCGAGCGGGCAGGCGGGCCACATAACGTCGGCCAGAGAG
189 -AA-G--CCAA--CCG-ACGAAACGAGCGGGCGAGCGGGCGGG-CAC-T-ACGCCGGCCAGAGAG
* * * *
14458833 ACGGGATGGCGGCAAAGCCGTGGATCG-TAGGCTTGGTAGGTGGGTATGGGCACCTCTTCATATT
244 ACGGGAT-GC-GC-AAGCCGTGGATCGATAGG-GTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
14458897 TGTGCATG-CAATGCCA-TTTTATGGCTTGTGAAA-TCCTAC-ATGGTCGCCTTAAGCCTTCACA
305 TCTGCATGCCAATGCCATTTTTATGGCTTGT-AAATTCATACAATGGTC-CCTTAAGCCTTCACG
* *
14458958 TGAAGTTTCATGGCAAGACGACTCGTCTTCTA--TTTCATGATTTTTGAAACTTTTTACGATTCG
368 TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCG
* * *
14459021 TGA-TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTCAATCCTCTGTA
433 GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT-GATCCT-TGTA
*
14459085 TTTTTGTTGGGCATGCACAACAAAAA-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
496 TTTTTGTTTGGCATGCACAA-AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
*
14459149 TCTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
560 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* * *
14459214 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGATTAATGAGGGATAGGGGGCCAATATAAAGGCC
625 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * * *
14459279 AAGTACCAGCACCTATTGCACATCAT-TGCGCACACCCCTCGGCCCCCCCAATCGTCGGAACCCA
690 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCC
* * * *
14459343 AATGTCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGCGAAGGAAAATGCGGT
755 AATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
* * * * *
14459408 GCCAGCACATGCCAGAGCCCAGCATGTGTTGCCGCAAACCTCGGTCTGGTCCGATCTTAGACT-G
820 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
14459472 G---G------A-ATG
885 GAATGAACTCCATATG
*
14459478 ---A-AC------T---CT--GTATGCCTAAGTCAACCCACGAACCGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** ** * * * *
14459528 CGGCCAGAGGGGCGGGATGCATAAGCCGATGATC-GACGGGGTCCTCCTTTGCGTGCTGTCGATA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATC
* * * * *
14459592 CTGCTGCTGCAACCCTCAGTTTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
14459657 ACTGACGAAATGAGCGGGC-AGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAAC
195 ACCGACGAAACGAGCGGGCGA-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
14459721 CGTGGATCGATAGTGTGCTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATT
259 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* * *
14459786 TTTATGGCTTGTAAATTCATACTATGGTTCCTTAAGCCTTCACGTGAGGTTTCATGGCAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * * *
14459851 CCCATTTTCTATTTTTTGATGATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTC
389 CTCGTTTTCTA-TTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * * *
14459916 GGAAAGCGTTTTGACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTTGGTATGTACAAA
453 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTTGGCATGCACAAA
**
14459981 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTCCGACCATTTGAAAAAAGTGTCCCCATTT
517 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
14460046 CAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGA
582 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14460111 CTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
647 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** *
14460176 TCATGTGCGCACACCCCCCCCGGCGACCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCT
712 TCATGTGCGCACA--CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * ** * * *
14460241 CTGGCAATGCTCCGGTGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGTCC
775 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** *
14460306 AGCATGTGCTGCTACAACCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
840 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* * * * * *
14460367 CTTAGACTGGGAATCAACTCGGTATGTCTAAGCCAACCCACGAAACGAGTGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * * ** *
14460432 CGGTAAGAGGGGCGGGATACACAAGCCGGGGATCAGCCGGGTCCCCCTCTGTGTGCTACCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * **
14460497 TGCTACCGCAACCCTTGGTCCGGTCCAATCTTAGACTACGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
14460562 CCGAAGAAACAAGCGGGCGGGCGGGCGGGCACTACTCTGGCCAGAGAGACTGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
14460627 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATTCCAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
*
14460692 TATGGCTTGTAAATTCATACAATGGTCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAAC
326 TATGGCTTGTAAATTCATACAATGGT-CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
** * * *
14460757 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTTGG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCG
* * ** *
14460822 GAA-GAGTTTTGCCCCCAAACTTGGTAGACGTGAACCTTGTATTTTTG-TTCACATGCATAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAAA
* * *
14460885 CATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCA
519 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
14460950 GACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTCAAATGCTCTATAAGAGGGTGTGAGT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
14461015 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
649 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** * *
14461080 ATGTGCGCAAACCCCCCCCCCCCGAGCATCCCGATCGACGGAACCCCAATGCCGCCGGTCAGGTT
714 ATGTGCGCACA-CCCCCCGGCCC---C--CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTT
* * * * ** *
14461145 CTTCGGCAATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCAACAGCAGCACATGCCCGAGC
773 CTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * *
14461210 CCAGTATTTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTTGACTGGGAATGAACTTCATATG
838 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* * * * * * *
14461273 CTTAGACTGGGAGTGAACTCCGTATGCCTAAGTCAACCAATGAAATGAGAGTGTGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14461338 TGGCCAGAGGGGCTGGATGTGCAAGCCCGGGATC-GACTGAGTCCCCCTCTGTGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
14461402 CTCCTGCCACAACCCTCGGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14461467 ACCGACGAAACGAGCGGGTGGGCGGGCGGGCACTACGCC-G---G-G-GA---GATGTGCAAGCC
195 ACCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * * *
14461523 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCATCATATTTCTACATGCCAAAGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
14461588 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
14461653 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGG
390 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * *
14461718 ATGGAGTTTTGG-CCCAAACTTGGTAGACATGATCCTTGCATTTTTG-TTGGCATGCACAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAAAA
*
14461781 ATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
14461846 ACACTTTCATGACTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * *
14461911 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCCACCACCTATCACACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** *
14461976 TGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCGAATGCCACCGGTCAGGTTCTCCGGC
715 TGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGAC
* * * *
14462040 GATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGTGACACCAGAACATGCCCGAGCCCAGCAT
780 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
14462105 GTGCTACCGCAACCCTCAGTCCGATCTGATCTTAGA-T-----TG----------G
845 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* *
14462145 C----A-T-----TGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14462200 CAGCCAGAGGGGCGGTATGTGCAAGTCGGGGATCGATCGGGTCCCCCTTTACGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * *
14462265 TGTTGCCGTAACCCTCGGTCTGATCCGATCATAGACTGGGAATGAACTCCGTACGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * **
14462330 CCGACGAAACGAGTTGTCGAGTGGGCTGGCGGGCACTATGCTAGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGA---G-CGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14462395 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
** * *
14462460 TTTTTACAGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAACTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
14462525 GACTCATTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * *
14462590 CAGAATGAGTTTTAGCCCCAAACTTGGTAGACGAGATCCTTGTATTTTTG-TTGGCATGCACAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAA
*
14462654 AAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
517 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
14462719 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
582 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
**
14462784 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCATACA
647 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
14462849 TCATGTGCGCACACCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGCCGCCGGTCAAGTTCTCC
712 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* * * * *
14462914 -AGTGATGCTCCGACGATGGTGCCCCGGCAAAGAAAAATACGGCACCAGAACATGCCCGAGCCCA
777 GA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* *
14462978 ACATGTGCTGCCGCAA-CC-C--T-CAGTCCGA---T---C------TG--------AT-
841 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* * * *
14463012 CTTAGATTGGCAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * ** * *
14463077 CAACCAGAGGGGCGGTATGTGTAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
14463142 TGCTACCGCAACCCTCGGTCTGATCCAATCATAGACTGGGAATGTACTCTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** *
14463207 CCAACGAAACGAGCGGTCGAGTGGGCTAGCGGGCACTACGCTAGCCAGAGAAACGGGATGCGCAA
196 CCGACGAAACGAGCGGGCGAG-CGG---GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14463272 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* ** * * *
14463337 TTTTCACAGCTTGTAAATTCATACAATGGTCCCTTAAGTCTTCACGTGAACTTTCATGGCAAGAT
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14463402 GACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTGTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * *
14463467 CGAAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCATTGTATTTTTG-TTGGCATGCACGAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCAC-AA
* * *
14463531 AAACA-TCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTTTCCCCATT
516 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * *
14463595 TCAGACACTTCAATAGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTG
581 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
14463660 AGTTTTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATTGCAC
646 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
*
14463725 ATCATGTGC-CACACCCCCCGGCCCCCCCGATCG-CTGGAACCCCAATGCCGTCTGTCAGGTTCT
711 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCT
* * * ** * *
14463788 CACGGCGAATGCTCCGGGCGATTGGTTCCTCCGGGGAAGCAAAACTAACGGCACCAGCACATG-C
775 C-CGACG-ATGCTCC-GACGA-TGGTGCC-CCGACGAAG-AAAAAT-GCGGCACCAGCACATGCC
* * * * *
14463852 CGTGCCTAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCAT
833 CGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCAT
14463917 ATG
898 ATG
* * * ** *
14463920 CTTAGACTGGGAATGAACTACGTATGCCTAAGTCAACCCACAAAACGAGCGTTCGGGTACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14463985 CGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTTTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * **
14464050 TGCTACCACAACCCTTGGCCTGGTCCGATCTTAGACTTGGAATGAACTTTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14464115 CCGACTAAACGAGCGGGC-AGGCGGGCGAGCACTACGTCGACCAGAGAGACGGGATGCACAAGCC
196 CCGACGAAACGAGCGGGCGA-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
14464179 GTGGATTGACT-GGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTACGTGCCAATGCCATT
260 GTGGATCGA-TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
14464243 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTGT-ACGTGAAGTTTCATGGTC-AGAC
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT-TCACGTGAAGTTTCATGG-CAAGAC
* * *
14464306 GACTCGTTTTATATTTTTCATGATTTTTGAAACTTTTTATGGTTCCGGATTTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* *
14464371 CAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG-TTGGCATGCACAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAA
*
14464435 AAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
517 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
14464500 CAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATTTGAAATGCTCTTTAAGGGGGTGAGA
582 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14464565 GTTCTCAAGGTTTG-TGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCACA
647 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* ** * * * *
14464629 TCATGTGCGCACACCCCCCTAG-CCCCCCGATCACCGGAACCCCAATGTCGCCGATCAGGTTCTT
712 TCATGTGCGCACACCCCCC-GGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * * *
14464693 CGACGATGCT-CTAGTGGTGGTGCCTCGCCGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCC
776 CGACGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * * * * *
14464757 AGCATGTGCTCCCGCAACCCTCGGTCTGATTCAATCTTAGATTGGGAATGAACTTCGTACG
840 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* * * *
14464818 CTTTGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGGTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** ** * * * *
14464883 CGACCAGAGGGGCGGGATGCGCAAGCTGGGGATCGACCGGGTCCAACTCTGTGTGTTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
** * *
14464948 TGCTGTCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14465013 CTGACGAAATGAGC--G-GA-CGGGTGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCG
196 CCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
**
14465074 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATATCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
14465139 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCTCGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * ** *
14465204 CGTTTTCTATTTTTCATGA-TTTTCAAAATGTTCTGGGGTTCGGGATTTTTTAAAATTTTTTTGG
391 CGTTTTCTATTTTTCATGATTTTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * * *
14465268 AAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTT-TTTGGCATGCATAAAAAA
455 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAAAA
* *
14465332 ATTCAGCTAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCGG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
14465396 ACACTTTAATGGCTAGTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
14465461 CTC-ATGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATC
650 CTCGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
14465524 ATGTGCGCACACCCCCCGG--ACCCCGATTGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGG
714 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGA
* * *
14465587 CTATGCTCCGACGATGGTGCCCCGACGAACAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCA
779 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
** * **
14465652 TGTGCTGCCGCAACCCTCCATCCGGTCCGGTCTTAGACTGGGAATGAACTCTGTATG
844 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* * *
14465709 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
14465774 CGGCCAGAGGGGTAGGATGCGTAAGCCGGGGATCGGCCGAGTCCCCCTCTACGTGCTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTC-GATC
* * * * * *** *
14465838 TTGTTGCCGTAACCC-CTTGTCCAATCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCC
130 CTGCTACCGCAACCCTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** **
14465902 -A---A--TTA-G-GCGGGC-AGACGGGCGGGCACTACGCCGGCCAGAGAGACAAGATGCGCAAG
194 AACCGACGAAACGAGCGGGCGAG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* **
14465958 CCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAT
258 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
14466023 TTTTATGGCTTGTAAATTCATACAAT-G--------G--TTC-CGT-AAGTTTCATGGCAAGACG
323 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * * *
14466075 ACTCATTTTCCATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAATTTTTTTC
388 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* * * * *
14466140 AGAAGGAGTTTTGGCCTCAAACCTGGTAGACGTGATCATTTTATTTTT-TTTGGCATGCACAAAA
453 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAA
* *
14466204 AAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTC
518 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
14466269 AGAAACTTTAATGGCTACTAGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
583 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
14466334 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCTTCGCACAT
648 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * *
14466399 CATGTGCGCACACCCCCCGGCCCACCCGATCGTTGGAACCCCAATGCCGTTGCTCAGGTTCTCTG
713 CATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * ** * * *
14466464 GCGATGCTCCGGCGATGGTGCCTGGGCGATGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGA
778 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * *
14466529 ATGTGCTGCCGCAACCCTAGGTCCGATCCGATCTTACACTGGGAATGAACTCCATATG
843 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* *
14466587 CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAATCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
14466652 CGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGG-CTGGGTCCCCCTCTGCGTGCT-TTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGTCGATC
* * * * * *
14466715 CTACTACCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTTAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * **
14466780 ACCGACGAAACGA----GCGAGCGGGTGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGTT
195 ACCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
14466841 GTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCAAATTTCTGCACGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* * *
14466906 TTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCACGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
14466971 TCCTTTTCTATTTTTCACGA-TTTTGAAATCTTTTTACGGTTCGAGATTTTTTAAAATTCTTTCG
390 TCGTTTTCTATTTTTCATGATTTTTGAAA-CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * * *
14467035 GAAGGAGTTTTGGCCTCAAACCTGGTAGACGTGATCCTTGAATTTTT-TTCGGCATGCACAAAAA
454 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAAA
*
14467099 AATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
519 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
14467164 AACACTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
584 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
14467229 TCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
649 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
14467293 ATGTGCGCACACCCCCCCAGCCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTTCG
714 ATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * *
14467358 ATGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGT
778 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * * *
14467423 ATGTGCT-ACGCAACCCTCGGTCTGATTCGATCTTTGACTGGAAATGAACTCCGTATG
843 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* * * *
14467480 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * * *
14467545 AGGCCAGAGGGGCGGGATGCTCATGCCGGGGATTGGCCGGGTACCGCTCTTCGTGCTATCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * * *
14467610 TGCTGCCATAACCCTCGGTCGGGTCTGATCTTAGACTGGAAATGAATTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * * *
14467675 CTAACGAAACGAGCGGGTGGGCGGGCGGGCGGGAACTACTCCGGCCAGAGAGACGAGATGCGCAA
196 CCGACGAAACGAGC----GGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
14467740 GCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGTACATTTTCATATTTCTACATGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14467805 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACTTGAAGTTTCGTGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * **
14467870 AACT-GTTTTCTATTTTTCATGATTTTTGAAACTTCTTGCGGTTCAAGATTTTTTAAAATTTTTT
387 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * * * *
14467934 TGGAAGGAGTTTTGGCCCCAAACTTGGTGGACATTATCCCTGTATTTTTG-TTGGCATGTACAAA
452 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAA
*
14467998 AAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
517 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
**
14468063 CAGACACTTTAATTCCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
582 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
14468128 GTTCTCAAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACA
647 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
14468192 TCATGTGCGCACACCCCCCCAGTCCCCCCGATCGCCGGAACCCCAATGCCG-C---C-GG---T-
712 TCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
*
14468248 ---C-A-G----GACGATGGTGCCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
776 CGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * * * * * **
14468304 ACATGTGCTACCACAACCGTTGGTCTGATCCGATCTTTGACT-GGAATGAACTCTGTATG
841 GCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* ** * *
14468363 CTTAGACTGGGAATGAACTCCGTATCCCTAAGTCAACCCATAAAATGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** *
14468428 CGGCCAGAGGGGCAGGATGTGCAAGCCGGGGATTGGTCGGGTCCCCCTCTGCATGCTACCGATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * *
14468493 TACTACCGCAACCCTCAGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * *
14468558 CCGATGAAACGTGCGGACGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGTGCAAGCCG
196 CCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14468623 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTT
261 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * *
14468688 TATGGCCTGTAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * * *
14468753 C--ATT-T-TTTATCATGATTTTT-AAAATTTTTTCTGTTCGGGATTTTTTTAAATTTTTTCGGA
391 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * * *
14468813 AGGCGTTTTGGCCCCAAACTTAGAAGACATGATCCTTGTATTTTT-TTTGG-ACTGCACAAAAAA
456 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCA-TGCACAAAAAA
* * *
14468876 ATTCAGCCAAAAACTCGAAATGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAG
520 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
14468941 ACACTTTAATGGCTGCTGCCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTT
585 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
14469006 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCA
650 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** * * *
14469071 CGTGCGCACACCCCCCTCGGCCCCCCCGATCCCCAGAACCCCAATGCCGCCGGTCCGGTTCTCCG
715 TGTGCGCACA-CCCCC-CGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * **
14469136 ACGATGCTCCGGCAATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAAT
778 ACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
14469201 ATGTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATG
843 ATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
* ** *
14469259 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTATGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14469324 CGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGTCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * * *
14469389 TGCTGCCTGCAATCCTCTGTGTGGTCCAATCGTACACTGGGAATGAACTCTGTATGCCTAAGCCA
131 TGCTACC-GCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
*
14469454 ACCGATGAAACG
195 ACCGACGAAACG
14469466 TGCGAGCGGG
Statistics
Matches: 10321, Mismatches: 1214, Indels: 525
0.86 0.10 0.04
Matches are distributed among these distances:
862 164 0.02
863 1 0.00
865 1 0.00
866 23 0.00
867 3 0.00
868 1 0.00
869 1 0.00
870 47 0.00
871 18 0.00
872 72 0.01
873 32 0.00
874 191 0.02
875 757 0.07
876 502 0.05
877 837 0.08
878 405 0.04
879 173 0.02
880 6 0.00
881 131 0.01
882 36 0.00
883 272 0.03
884 32 0.00
885 4 0.00
886 2 0.00
887 132 0.01
888 127 0.01
889 6 0.00
890 153 0.01
891 294 0.03
892 10 0.00
893 355 0.03
894 785 0.08
895 328 0.03
896 233 0.02
897 232 0.02
898 262 0.03
899 21 0.00
900 25 0.00
901 408 0.04
902 792 0.08
903 160 0.02
904 1061 0.10
905 71 0.01
906 338 0.03
907 5 0.00
908 184 0.02
909 1 0.00
910 2 0.00
911 1 0.00
912 1 0.00
913 4 0.00
914 44 0.00
915 9 0.00
916 182 0.02
917 225 0.02
918 11 0.00
919 81 0.01
920 13 0.00
921 33 0.00
922 21 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCC
TGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
TGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATG
Found at i:14463216 original size:877 final size:873
Alignment explanation
Indices: 14455168--14469482 Score: 15750
Period size: 904 Copynumber: 16.1 Consensus size: 873
14455158 NNNNNNNNNC
* * * * * *
14455168 GGTCTGATCTTACACT-GGAATGAACTCTGTATGCCTAAGCGCGAAACGACGAAACGTGG-GCGC
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC-C-AACCGACGAAACGAGGCGAGC
* * * * *
14455231 -GGCGGGGCGGGGGCACTATGCCGACCAGAGAGACGGGATGCGCAAGTCATGGATCGATAGGGTG
64 GGGC-GGGC--GGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
14455295 GTAGG-GGGTTTATGG-ACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAAT
126 GTAGGTGGGTTTA-GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
* *
14455358 TCATACAATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
190 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * **
14455423 CACGA-TTTTGAAACCTTTTACGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
255 CATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * * *
14455487 CAAATTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
320 CAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
14455552 GAAGTGTACAAGATTGTCTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
385 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * * * *
14455617 TAGCAGCAAACTTGTAAAATCTCAAATCCTTTTTAA-GGGGTGTGAGTTCTTGAGGTTTGATGAG
450 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* * * *
14455681 GGATAGGGGGCCAATATGAGGGCCCAGTACCAGCACCCATTGCACATCATGTGGGCACA------
515 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * *
14455740 -ACCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCG-G-TGAT--G-C--T-GT-
580 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGACGATGGTG
* * * * * * *
14455795 -CACGGCGAAGAAAAATGCGGCACCGGCACATGCCTGATCCTAGCATGTGCTGTCGTAAACCTCT
645 CCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG-CAA-C-C-
*
14455859 GTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
706 --C---T-CAGTC-----C---G-AT---CT--G-ATGCTTAGACTGGGAATGAACTCCGTATGC
* * * *
14455924 CTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCATA--GGCGAGATGCGTAAGCC
750 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
* * ** *
14455987 GGGGATCGGCCGGGTTCCCCTCTGCGTGCTGTCGATCCTGCTATCGCAACCCTCCATCC
815 GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * * * * *
14456046 GATCTGATCTTGGACTGGGAATGAATTCTGTATGCCTAAGCCAACTGACGAAACGGACGGTCGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-GA-GG-CGAG
* * * * *
14456111 CAGGCGGGCGGGCACTACGCCGGCCTGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGTTGGT
63 CGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
*
14456176 AGGTGGGTTTGGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
128 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
*
14456241 TACAA------CTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCAT
193 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* * *
14456300 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTTAAATTTTTTGGGAAGGCGTTTTGGCCCCAA
258 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
14456365 ACTT-GTAGAC-ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
323 ACTTGGTAGACGA-GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
14456428 AGTGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCACATTTCAGACACTTTAATGGTTACTG
387 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
14456493 GCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGA
452 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
14456558 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACCCCCCCACG
517 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CG
* * * * * * *
14456623 GCCCCTCTGATCATCGGGACCCGAATCCCGCCGGTCAGGTTCTTCGGCGATGCTCCGGCGATGGT
581 GCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC-TCCGCGATGCTCCGACGATGGT
* *
14456688 GCCCTGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGTTGCCTGGCAACCC
644 GCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC--GCAACCC
* * * * * *
14456753 TCGGTCCGGTCCGATCCTTAGTACTGGG-ATGAACTCCGTAT-CCTAAGTTAACCC-CGAAACCA
707 TCAGTCCGATCTGATGCTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
* * * * * **
14456815 GCATGCGGGCTGCTCAACTGGCTAGAGGGGCTGGGATTGGCGCAAGCCGAGGATCCGATCGGGTC
771 GCGTGCGGGC-GCTCAGCCGGCCAGAGGGGC-GGGA-T-GCGCAAGCCGGGGAT-CGGCCGGGTC
* * ** * *
14456880 CCTCTTCTGTGTGCTACCGATCCTACTACCACAACCCTCAGGTCT
831 CC-CCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTC-GGTCT
* * * * *
14456925 GATCTGATCTTGGACTGGGAATGAACTCTGTATGCCTAAGCCAACTGACG-AA--A--CGAGCGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * * *
14456985 ACGGGTGAGCACTACG-TCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
66 GCGGGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* * * ** * *
14457049 GTGGGTTTAGGTACATCTTTATATTTTTGTGTGTCAATGCCATTTTTATGGCTTGTAAATTGATA
130 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
14457114 CAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACTACTCGTTTTTTATTTTTCATGA
195 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
* * * *
14457179 TTTTCGAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCTAAAC
260 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
14457244 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCGTGCACAAAAAAATTCAGCTAAAAACTCGAGGT
325 TTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
14457309 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACCCTTTAATTGCTACTGGCA
390 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * * *
14457374 GCAAACCTGTAAAATCTAAAATGCTCTTTAAAGGGGTGTCCA-TTCTGGAGGTTTGATGAGGGAT
455 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT-GAGTTCTCGAGGTTTGATGAGGGAT
** *
14457438 AGGGGGCCAATATAAAAGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCTGGC
519 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GG-
* * * *
14457503 CCCCCCAATTGTCAGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGC
582 CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGTG-
** ** * * *
14457568 CCCCGATGAAGAAAAATGCGGCAATAGCACATGCCTGACCCCATCATGTGCTGCCGCAACCCTCA
645 CCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCA
*
14457633 GTCCAGTCTGATCTTAGACTAGGAATGAACTCCTTATGCTCAGACTAGGAATGAACTCCGTATGC
710 GT-C---C-GA---T---CT--G-ATG-----C---T--T-AGACTGGGAATGAACTCCGTATGC
* * *
14457698 CTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCT
750 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
* * * * * * *
14457763 GAGGATCGGTCGGGTCCCCCTCTACGTGCTATCGATCTTGCTACTGCAACCCTTGGTCT
815 GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * * *
14457822 GGTCTGATGTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGA-GCGGGCGA
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * *
14457886 GTGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
66 GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * * *
14457951 TGGGGTATAGGAACATCTTCATATTTCTGCATGTCAATGCCATTTTTGTGGCTTGTAAATTCATA
131 T-GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
14458016 CAATGGTTCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
195 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
* * * * *
14458081 TTTTTAAAACTTTTTATGGTTCGGGATTTTTTTTAAAATTTTTCCTGAAGGATTTTTGGCCCCAA
260 TTTTTGAAACTTTTTACGGTTCGGGA--TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* *
14458146 ACTTGGTAGAC-ATCATCCTTGTATTTTTGTTTGG-TTGCACAAAAAAATTCAGCTAAAAACTCG
323 ACTTGGTAGACGA-GATCCTTGTATTTTTG-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* *
14458209 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACA
386 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * * *
14458274 GGCAGCAAACCTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGATTAATGAGG
451 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
*
14458339 GGTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
516 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* * * *
14458404 GCCCCCCCAATCGCCGGAACCCCAATGCCGTCAGTCAGGTTCTCCGACGATGCTCCGACGATGGT
581 G-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGT
* * *
14458469 GCCCCGACGAAGAAAAATGCGACACCAGTACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCGC
644 GCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C
* * *
14458534 GGTCCGGTCCGATCTTAGACTGGGAACGAACTCCATATGCTTAGACTGAGAATTAACTCCGTATG
707 --T-CAGTCCGA---T---CT------G--------ATGCTTAGACTGGGAATGAACTCCGTATG
* *
14458599 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGTAAGC
749 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* * * * * *
14458664 CGGGGATCGGTCGGGTCCCCTTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCAGTCT
814 CGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* *
14458724 GGTCTGATCTTAGACCGGGAATGAACTCCGTATGCCCCCCCCTTAAAGGCCCCAACCCCGAAC-A
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATG------CC-T-AA-G--CCAA--CCG-ACGA
** ** *
14458788 AAAAAACCGAGCGGGCAGGCGGGCCACATAACG-TCGGCCAGAGAGACGGGATGGCGGCAAAGCC
52 AACGAGGCGAGCGGGCGGGCGGG-CAC-T-ACGCT-GGCCAGAGAGACGGGAT-GC-GC-AAGCC
* * * * *
14458852 GTGGATCG-TAGGCTTGGTAGGTGGGTATGGGCACCTCTTCATATTTGTGCATG-CAATGCCA-T
110 GTGGATCGATAGG-GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* *
14458914 TTTATGGCTTGTGAAA-TCCTAC-ATGGTCGCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAC
174 TTTATGGCTTGT-AAATTCATACAATGGTC-CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
14458977 GACTCGTCTTCTA--TTTCATGATTTTTGAAACTTTTTACGATTCGTGA-TTTTTAAAATTTTTT
237 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
*
14459039 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTCA-ATCCTCTGTATTTTTGTTGGGCATGCAC
302 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG--AGATCCT-TGTATTTTTGTT-GGCATGCAC
*
14459103 AACAAAAA-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATCTGAAAAAAGTGTCCCC
363 AA-AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
14459167 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
427 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * * *
14459232 GTGAGTTCTCGAGGATTAATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACCAGCACCTATTG
492 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
14459297 CACATCAT-TGCGCACACCCCTCGGCCCCCCCAATCGTCGGAACCCAAATGTCGTCGGTCAGGTT
557 CACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* ** *
14459361 CTCCGACGATGCTCCGACGATGGTGCCCCGGCGAAGGAAAATGCGGTGCCAGCACATGCCAGAGC
621 CTCCG-CGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * * * * *
14459426 CCAGCATGTGTTGCCGCAAACCTCGGTCTGGTCCGAT-CTTAGACTGGGAATGAACTCTGTATGC
685 CCAGCATGTGCTGCCGCAACCCTCAGTCCGATCTGATGCTTAGACTGGGAATGAACTCCGTATGC
* **
14459490 CTAAGTCAACCCACGAACCGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCATAAGCC
750 CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCC
** * * * * * * * * *
14459555 GATGATCGACGGGGTCCTCCTTTGCGTGCTGTCGATACTGCTGCTGCAACCCTCAGTTT
815 GGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * * *
14459614 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAATGA-GCGGGCAG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * * *
14459678 GCGGGTGGGCACTACG-TCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGTGTGCTAG
66 GCGGGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
14459742 GTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
130 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * * * * *
14459807 CTATGGTTCCTTAAGCCTTCACGTGAGGTTTCATGGCAAGACGACCCATTTTCTATTTTTTGATG
195 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTTCATG
* * * * * *
14459872 ATTTTTGAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTCGGAAAGCGTTTTGACCCCAAA
259 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * *
14459937 CTTGGTAGACGTGATCCTTGTATTTTTTTTTTGGTATGTACAAAAAAATTCAGCTAAAAACTCGA
324 CTTGGTAGACGAGATCCTTGTA--TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
**
14460002 AGTGTACAAGATTTTCCGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
387 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * * *
14460067 GCAGCAAACTTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGACTTCTCGAGGTTTGATAAGGG
452 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
14460132 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCC
517 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCC
* * * * * **
14460197 GGCGACCCCGATCGTCGGAACCCCAATGCCGTCGGTTAGGTTCTCTGGCAATGCTCCGGTGATGG
580 GGC-CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC-CGCGATGCTCCGACGATGG
* * **
14460262 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCTGAGTCCAGCATGTGCTGCTACAACCCT
643 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* *
14460327 CAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATCAACTCGGTAT
708 CA-----GTCCGA---T---C------TG--------ATGCTTAGACTGGGAATGAACTCCGTAT
* * * * ** * *
14460392 GTCTAAGCCAACCCACGAAACGAGTGTGCGGGTGCTCAGCCGGTAAGAGGGGCGGGATACACAAG
748 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
* * ** * * *
14460457 CCGGGGATCAGCCGGGTCCCCCTCTGTGTGCTACCAATCCTGCTACCGCAACCCTTGGTCC
813 CCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* ** * * *
14460518 GGTCCAATCTTAGACTACGAATGAACTCCGTATGCCTAAGCCAACCGAAGAAAC-AAGCGGGCGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* *
14460582 GCGGGCGGGCACTACTCTGGCCAGAGAGACTGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
66 GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
14460647 TGGGTTTAGGCACATCTTCATATTTCTACATTCCAATGCCATTTTTATGGCTTGTAAATTCATAC
131 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
*
14460712 AATGGTCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGA
196 AATGGT-CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
** * * * *
14460777 TTTTCAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTTGGGAA-GAGTTTTGCCCCCAAA
260 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * ** * * *
14460841 CTTGGTAGACGTGAACCTTGTATTTTTGTTCACATGCATAAAAACATTCAGCTAAAAACTCGAAC
324 CTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
14460906 TGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGC
389 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * * *
14460971 AGCAAACCTATAAAATCTCAAATGCTCTATAAGAGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT
454 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
*
14461036 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAAACCCCCCCCCC
519 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC--A----CACCCC
** * * *
14461101 CCGAGCATCCCGATCGACGGAACCCCAATGCCGCCGGTCAGGTTCTTCGGCAATGCTCCGACGAT
578 CCG-GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC-TCCGCGATGCTCCGACGAT
** ** * * * *
14461166 GGTGCCCCGATGAAGAAAAATGCAACAGCAGCACATGCCCGAGCCCAGTATTTGCTGCCGTAACC
641 GGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-C
* *
14461231 CTCGGTCCGGTCCGATCTTTGACTGGGAATGAACTTCATATGCTTAGACTGGGAGTGAACTCCGT
705 C-C--T-CAGTCCGA----T--C------TG--------ATGCTTAGACTGGGAATGAACTCCGT
* * * * * * * * *
14461296 ATGCCTAAGTCAACCAATGAAATGAGAGTGTGGGTGCTCAGCTGGCCAGAGGGGCTGGATGTGCA
746 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
* * * * * * * * *
14461361 AGCCCGGGATCGACTGAGTCCCCCTCTGTGTGCTGTCGATCCTCCTGCCACAACCCTCGGTCC
811 AGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * *
14461424 GATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA-GCGGGTGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * *
14461488 GCGGGCGGGCACTA--C--GCC-G-G-G--GAGATGTGCAAGCCATGGATCGATAGGGTGGTAGG
66 GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * * *
14461544 TGGGTTTAGGCATATCATCATATTTCTACATGCCAAAGCCATTTTTATGGCTTGTAAATTCATAC
131 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * *
14461609 AATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGAT
196 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * *
14461674 TTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTGGATGGAGTTTTGG-CCCAAACT
261 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
* *
14461738 TGGTAGAC-ATGATCCTTGCATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGT
326 TGGTAGACGA-GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
14461802 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTCATGACTACTGGCA
390 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
14461867 GCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
455 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * *
14461932 GGGGGCCAATATAAGGGCCAAGTTCCACCACCTATCACACATCATGTGCGCACACCCCCCGGCCC
520 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
* *
14461997 CCCGATCGTCGGAACCCGAATGCCACCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
585 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGATGCTCCGACGATGGTGCCCC
* * * * * *
14462062 GACAAAGAAAAATGTGACACCAGAACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCAGTCC
649 GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCC
* * * *
14462127 GATCTGAT-CTTAGATTGGCATTGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGG
714 GATCTGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * * ** * *
14462191 GCGCTCAACCAGCCAGAGGGGCGGTATGTGCAAGTCGGGGATCGATCGGGTCCCCCTTTACGTGC
779 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGC
* * *
14462256 TGTCGATCCTGTTGCCGTAACCCTCGGTCT
844 TGTCGATCCTGCTACCGCAACCCTCGGTCT
* * *
14462286 GATCCGATCATAGACTGGGAATGAACTCCGTACGCCTAAGCCAACCGACGAAACGAGTTGTCGAG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG--G-CGAG
* * * * *
14462351 TGGGCTGGCGGGCACTATGCTAGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGT
63 CGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* **
14462416 AGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATTTTTACAGCTTGTAAATTCA
128 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * *
14462481 TACAATGGTCTCTTAAGCCTTCACGTGAACTTTCATGGCAAGACGACTCATTTTCTATTTTTCAT
193 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* * *
14462546 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAATGAGTTTTAGCCCCAA
258 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
*
14462611 ACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAA
323 ACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
14462676 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
388 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
14462741 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
453 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
**
14462806 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCATACATCATGTGCGCACACCCCCCGGC
518 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* *
14462871 CCCTCCGATCGTCGGAACCCCAATGCCGCCGGTCAAGTTCTCCAGTGATGCTCCGACGATGGTGC
583 CCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGATGCTCCGACGATGGTGC
* * * *
14462936 CCCGGCAAAGAAAAATACGGCACCAGAACATGCCCGAGCCCAACATGTGCTGCCGCAACCCTCAG
646 CCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAG
* * *
14463001 TCCGATCTGAT-CTTAGATTGGCAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTG
711 TCCGATCTGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* ** * * * * *
14463065 TGGGCGCTCAGCCAACCAGAGGGGCGGTATGTGTAAGCCGGGGATCGACCGGGTCCCCCTCTACG
776 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCG
*
14463130 TGCTGTCGATCTTGCTACCGCAACCCTCGGTCT
841 TGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * * * *
14463163 GATCCAATCATAGACTGGGAATGTACTCTGTATGCCTAAGCCAACCAACGAAACGAGCGGTCGAG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA--GG-CGAG
* ** * * *
14463228 TGGGCTAGCGGGCACTACGCTAGCCAGAGAAACGGGATGCGCAAGCTGTGGATCGATAGGGTGGT
63 CGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * **
14463293 AGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATTTTCACAGCTTGTAAATTCA
128 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * * *
14463358 TACAATGGTCCCTTAAGTCTTCACGTGAACTTTCATGGCAAGATGACTCATTTTCTATTTTTCAT
193 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* * * * *
14463423 GATTTTTAAAACTTTTTACGGTTCAGGATTTTTTAAAATTGTTTCGAAAGGAGTTTTGGTCCCAA
258 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* * *
14463488 ACTTGGTAGACGTGATCATTGTATTTTTGTTGGCATGCACGAAAAACA-TCAGCTAAAAACTCGA
323 ACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGA
* * * *
14463552 AATGTACAAGATTTTGTGACCATTTGAAAAAAGTTTCCCCATTTCAGACACTTCAATAGCTACTG
387 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * * *
14463617 GTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTTTCAAGGTTTGATGAGGG
452 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
14463682 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATTGCACATCATGTGC-CACACCCCCCGG
517 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG
* * *
14463746 CCCCCCCGATCG-CTGGAACCCCAATGCCGTCTGTCAGGTTCTCACGGCGAATGCTCCGGGCGAT
582 -CCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTC-C-GCG-ATGCTCC-GACGA-
* * * * * * *
14463810 TGGTTCCTCCGGGGAAGCAAAACTAACGGCACCAGCACATG-CCGTGCCTAGCATGTGCTGCCAC
640 TGGTGCC-CCGGCGAAG-AAAAAT-GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
*
14463874 AACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCCATATGCTTAGACTGGGAATGAACT
702 AA-CC-C--TC-AGTCCGA---T---C------TG--------ATGCTTAGACTGGGAATGAACT
* * * ** * *
14463939 ACGTATGCCTAAGTCAACCCACAAAACGAGCGTTCGGGTACTCAGTCGGCCAGAGGGGTGGGATG
742 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * * * * * * *
14464004 CGTAAGCCGGGGATCGGTCGGGTCCCCCTTTGCATGCTGCCGATCCTGCTACCACAACCCTTGGC
807 CGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGT
14464069 CT
872 CT
* ** * * *
14464071 GGTCCGATCTTAGACTTGGAATGAACTTTGTATGCCTAAGCCAACCGACTAAACGA-GCGGGCAG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * * *
14464135 GCGGGCGAGCACTACG-TCGACCAGAGAGACGGGATGCACAAGCCGTGGATTGACT-GGGTGGTA
66 GCGGGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA-TAGGGTGGTA
* * *
14464198 GGTGGGTTTAGGCACATCATCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
129 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
*
14464263 ACAATGGTCCCTTAAGCCTGT-ACGTGAAGTTTCATGGTC-AGACGACTCGTTTTATATTTTTCA
194 ACAATGGTCCCTTAAGCCT-TCACGTGAAGTTTCATGG-CAAGACGACTCGTTTTCTATTTTTCA
* * * *
14464326 TGATTTTTGAAACTTTTTATGGTTCCGGATTTTTTAAAATTTTTTCAGAAAGAGTTTTGGCCCCA
257 TGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* *
14464391 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCAAAAAACTCGA
322 AACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
14464456 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
387 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* * * * *
14464521 GCAGCAAACCTATAAAATTTGAAATGCTCTTTAAGGGGGTGAGAGTTCTCAAGGTTTG-TGAGGG
452 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
14464585 ATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTA
517 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-G
** * * * * * *
14464650 GCCCCCCGATCACCGGAACCCCAATGTCGCCGATCAGGTTCTTCGACGATGCT-CTAGTGGTGGT
581 GCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGA-CGATGGT
* * * * *
14464714 GCCTCGCCGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCCAGCATGTGCTCCCGCAACCCTC
644 GCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * *
14464779 GGTCTGATTCAATCTTAGATTGGGAATGAACTTCGTACGCTTTGACTGGGAATGAACTTCGTATG
709 AGTC-----CGATC------T--G-ATG--C-T--TA------GACTGGGAATGAACTCCGTATG
* * *
14464844 CCTAAGTCAACCCACGAAACAAGCGTGCGGGCGGTCAGCCGACCAGAGGGGCGGGATGCGCAAGC
749 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* * ** * * * * ** *
14464909 TGGGGATCGACCGGGTCCAACTCTGTGTGTTGCCGATCTTGCTGTCGCAACCCTCAGTCT
814 CGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * *
14464969 GGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACG-AA--A--TGAGCGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * * *
14465029 ACGGGTGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
66 GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
**
14465094 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATATCATTTTTATGGCTTGTAAATTCATAC
131 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* *
14465159 AATGGTCCCTTAAGCTTTCTCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-
196 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * * ** * *
14465223 TTTTCAAAATGTTCTGGGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCAAAC
261 TTTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * *
14465288 TTGGTAGAC-ATGATCCTTTTATTTTTTTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAG
325 TTGGTAGACGA-GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* * *
14465352 TGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCGGACACTTTAATGGCTAGTGGC
389 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
14465416 AACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTC-ATGGTTTGATGAGGGA
454 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGA
*
14465480 TA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGG-
518 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * * *
14465543 ACCCCGATTGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCTATGCTCCGACGATGGTGCC
583 CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGATGCTCCGACGATGGTGCC
* * *
14465608 CCGACGAACAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCCAT
647 CCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT-CA-
*
14465673 CCGGTCCGGTCTTAGACTGGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCGTATGCCT
710 --------GTC-----C-------G-A-TCTG-ATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * ** *
14465738 AAGTCAACCAACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTAGGATGCGTAAGCCGG
752 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * * * * * *
14465803 GGATCGGCCGAGTCCCCCTCTACGTGCTG-CTGATCTTGTTGCCGTAACCC-CTTGTCC
817 GGATCGGCCGGGTCCCCCTCTGCGTGCTGTC-GATCCTGCTACCGCAACCCTC-GGTCT
** * ** *
14465860 AATCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAA-TTA-G--GCG-GGC-A---G
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* * ** *
14465916 ACGGGCGGGCACTACGCCGGCCAGAGAGACAAGATGCGCAAGCCGTGGATCAATAGGGTGGTAGG
66 GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
**
14465981 TGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
131 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * *
14466046 AAT-G--------G--TTC-CGT-AAGTTTCATGGCAAGACGACTCATTTTCCATTTTTCACGAT
196 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * * * *
14466098 TTTTGAAACTTTTTACGGTTTGGGATTTTTTAAATTTTTTTCAGAAGGAGTTTTGGCCTCAAACC
261 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
* * * * *
14466163 TGGTAGACGTGATCATTTTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTG
326 TGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * *
14466228 TACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGAAACTTTAATGGCTACTAGCAG
391 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
14466293 CAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
456 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* *
14466358 GGGGCCAAAATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGCACACCCCCCGGCCCA
521 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-
* ** * * * **
14466423 CCCGATCGTTGGAACCCCAATGCCGTTGCTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCTG
585 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTC-CGCGATGCTCCGACGATGGTGCCCC
* *
14466488 GGCGATGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGAATGTGCTGCCGCAACCCTAGGTCC
649 GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC----T-C
* *
14466553 GATCCGATCTTACACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCTTAA
709 -A---G----T-C-C---G-AT---CT---GATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* *
14466618 GTCAATCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGG
754 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * *
14466683 ATCGGCTGGGTCCCCCTCTGCGTGCT-TTGATCCTACTACCGTAACCCTCGGTCC
819 ATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * *
14466737 GGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTTAGCCAACCGACGAAACGA-GCGA----
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
* ** ** *
14466797 GCGGGTGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGTTGTGGATCGATAAGGTGGTAGG
66 GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
14466862 TGGGTTTAGGCACATCTTCAAATTTCTGCACGCCAATGCCATTTTTATGGCTTCTAAATTCATAC
131 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * * *
14466927 AATGGTCCCTTAAGCCTTCACGTTAAGTTTCACGGCAAGACGACTCCTTTTCTATTTTTCACGA-
196 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * *
14466991 TTTTGAAATCTTTTTACGGTTCGAGATTTTTTAAAATTCTTTCGGAAGGAGTTTTGGCCTCAAAC
261 TTTTGAAA-CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
14467056 CTGGTAGACGTGATCCTTGAATTTTT-TTCGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAG
325 TTGGTAGACGAGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
14467120 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAACGGCTACTGGC
389 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
14467185 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
454 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
*
14467250 A-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAGC
519 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GG
* * * *
14467314 CCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGATGATGCTCCGACGATGGTGC
582 CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGTGC
** * *
14467379 CCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTATGTGCT-ACGCAACCCTCGG
646 CCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--
*
14467443 TCTGATTCGATCTTTGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCC
707 TC--A---G-TC-----C--G--AT---CT--G-ATGCTTAGACTGGGAATGAACTCCGTATGCC
* * ** * *
14467508 TAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGTAGGCCAGAGGGGCGGGATGCTCATGCCG
751 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * * * * * ** *
14467573 GGGATTGGCCGGGTACCGCTCTTCGTGCTATCGATCTTGCTGCCATAACCCTCGGTCG
816 GGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * ** * *
14467631 GGTCTGATCTTAGACTGGAAATGAATTCCGTATGCCTAAGCCAACTAACGAAACGAGCGGGTGGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---GGCGAG
* * * * *
14467696 CGGGCGGGCGGGAACTACTCCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATTGATAGGGTGGT
63 CGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
* * *
14467761 AGGTGGGTTTAGGTACATTTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCA
128 AGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * *
14467826 TACAATGGTCCCTTAAGCCTTCACTTGAAGTTTCGTGGCAAGACAACT-GTTTTCTATTTTTCAT
193 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAT
* * ** *
14467890 GATTTTTGAAACTTCTTGCGGTTCAAGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAA
258 GATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* * * * *
14467955 ACTTGGTGGAC-ATTATCCCTGTATTTTTGTTGGCATGTACAAAAAAATTCAGCTAAAAACTCAA
323 ACTTGGTAGACGA-GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
**
14468019 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTCCTACTG
387 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*
14468084 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
452 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
14468149 ATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCA
517 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-
* *
14468213 GTCCCCCCGATCGCCGGAACCCCAATGCCG-C---C-GG---T---C-A-G----GACGATGGTG
580 GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGACGATGGTG
** * * *
14468261 CCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCACAACCGTTG
645 CCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC----
* *
14468326 GTCTGATCCGATCTTTGACTGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATCCC
706 --C---TCAG-TC-----C------G-A-TCTG-ATGCTTAGACTGGGAATGAACTCCGTATGCC
** * * * *
14468391 TAAGTCAACCCATAAAATGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCAGGATGTGCAAGCCG
751 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * ** * * *
14468456 GGGATTGGTCGGGTCCCCCTCTGCATGCTACCGATACTACTACCGCAACCCTCAGTCT
816 GGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCT
* * * *
14468514 GGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACG-TGCG-GACG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAG-CG
* *
14468577 GGCGGGCGGGCACTACG-TCGACCAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTA
65 GGCGGGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
14468641 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTTTATGGCCTGTAAATTCAT
129 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * *
14468706 ACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC--ATT-T-TTTATCATG
194 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * * *
14468767 ATTTTT-AAAATTTTTTCTGTTCGGGATTTTTTTAAATTTTTTCGGAAGGCGTTTTGGCCCCAAA
259 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * *
14468831 CTTAGAAGAC-ATGATCCTTGTATTTTTTTTGG-ACTGCACAAAAAAATTCAGCCAAAAACTCGA
324 CTTGGTAGACGA-GATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTCGA
* * *
14468894 AATGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTGCTG
387 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
* *
14468959 CCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
452 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
* *
14469024 ATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCACGTGCGCACACCCCCCTC
517 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-C
** * * * *
14469089 GGCCCCCCCGATCCCCAGAACCCCAATGCCGCCGGTCCGGTTCTCCGACGATGCTCCGGCAATGG
580 GG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGG
** ** *
14469154 TGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAATATGTGCTGCCACAACCCT
643 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA----
*
14469219 CGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
704 C---CC--TCAG-TC-----C---G-AT---CT--G-ATGCTTAGACTGGGAATGAACTCCGTAT
* ** * * *
14469284 GCCTAAGTCAACCCACGAAACGAGCTTATGGGCGCTCAACCGACCAGAGGGGCAGGATGCGCAAG
748 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG
** * * * * * *
14469349 CCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGTCAATCCTGCTGCCTGCAATCCTCTGTGT
813 CCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACC-GCAACCCTCGGTCT
* * * * * *
14469411 GGTCCAATCGTACACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACG-TGCGAGCGG
1 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
*
14469475 GCAGGCGG
66 GCGGGCGG
14469483 CTAGGTGGGT
Statistics
Matches: 11634, Mismatches: 1351, Indels: 885
0.84 0.10 0.06
Matches are distributed among these distances:
862 176 0.02
863 2 0.00
865 1 0.00
866 19 0.00
868 1 0.00
870 64 0.01
871 162 0.01
872 83 0.01
873 39 0.00
874 391 0.03
875 892 0.08
876 519 0.04
877 1038 0.09
878 682 0.06
879 356 0.03
880 67 0.01
881 141 0.01
882 41 0.00
883 275 0.02
884 48 0.00
885 7 0.00
886 6 0.00
887 147 0.01
888 111 0.01
889 17 0.00
890 177 0.02
891 269 0.02
892 25 0.00
893 346 0.03
894 781 0.07
895 371 0.03
896 225 0.02
897 245 0.02
898 223 0.02
899 24 0.00
900 24 0.00
901 407 0.03
902 769 0.07
903 162 0.01
904 1089 0.09
905 66 0.01
906 332 0.03
907 14 0.00
908 182 0.02
909 2 0.00
910 5 0.00
911 8 0.00
912 1 0.00
913 7 0.00
914 44 0.00
915 14 0.00
916 153 0.01
917 226 0.02
918 11 0.00
919 80 0.01
920 13 0.00
921 33 0.00
922 21 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (873 bp):
GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGCGAGCGG
GCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
TGGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC
CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGACGATGGTGCCCCGG
CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAGTCCGA
TCTGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC
GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTG
TCGATCCTGCTACCGCAACCCTCGGTCT
Found at i:14463945 original size:26 final size:26
Alignment explanation
Indices: 14463894--14463946 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
14463884 CTGGTCCGAT
*
14463894 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTACATATG
* *
14463920 CTTAGACTGGGAATGAACTACGTATG
1 CTTAGACTAGGAATGAACTACATATG
14463946 C
1 C
14463947 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.19, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTACATATG
Found at i:14465264 original size:904 final size:895
Alignment explanation
Indices: 14463012--14477013 Score: 15293
Period size: 902 Copynumber: 15.8 Consensus size: 895
14463002 CCGATCTGAT
* * * *
14463012 CTTAGATTGGCAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * *
14463077 CAACCAGAGGGGCGGTATGTGTAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * *
14463142 TGCTACCGCAACCCTCGGTCTGATCCAATCATAGACTGGGAATGTACTCTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** *
14463207 CCAACGAAACGAGCGGTCGAGTGGGCTAGCGGGCACTACGCTAGCCAGAGAAACGGGATGCGCAA
196 CCGACGAAACGAGC-G--GA--CGG---GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14463272 GCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* ** * * *
14463337 TTTTCACAGCTTGTAAATTCATACAATGGTCCCTTAAGTCTTCACGTGAACTTTCATGGCAAGAT
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
14463402 GACTCATTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCAGG---ATTTTTTAAAATTG
383 GACTCGTTTTCTATTTTTCATGATTTTGAAAA-TTTTT-CGGTTCGGGTTTATTTTTTAAAATTT
* * *
14463464 TTTCGAAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCATTGTATTTTTGTTGGCATGCACG
446 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-
* * *
14463529 AAAAACA-TCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTTTCCCCA
510 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * * *
14463593 TTTCAGACACTTCAATAGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATG
575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * *
14463658 TGAGTTTTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAACCATTGC
640 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* *
14463723 ACATCATGTGC-CACACCCCCCGGCCCCCCCGATCG-CTGGAACCCCAATGCCGTCTGTCAGGTT
705 ACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTT
* * * * ** * *
14463786 CTCACGGCGAATGCTCCGGGCGATTGGTTCCTCCGGGGAAGCAAAACTAACGGCACCAGCACATG
768 CT-TCGACG-ATGCTCC-GACGA-TGGTGCC-CCGACGAAG-AAAAAT-GCGGCACCAGCACATG
* * * * *
14463851 -CCGTGCCTAGCATGTGCTGCCACAACCCTCGGTCTGGTCCGATCTTAGACTAGGAATGAACTCC
826 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCC
*
14463915 ATATG
891 GTATG
* * * ** *
14463920 CTTAGACTGGGAATGAACTACGTATGCCTAAGTCAACCCACAAAACGAGCGTTCGGGTACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * *
14463985 CGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTTTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * **
14464050 TGCTACCACAACCCTTGGCCTGGTCCGATCTTAGACTTGGAATGAACTTTGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14464115 CCGACTAAACGAGCGGGCAGGCGGGCGAGCACTACGTCGACCAGAGAGACGGGATGCACAAGCCG
196 CCGACGAAACGAGC-GG-A--CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * *
14464180 TGGATTGACT-GGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTACGTGCCAATGCCATTT
257 TGGATCGA-TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
14464244 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTGT-ACGTGAAGTTTCATGGTC-AGACG
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT-TCACGTGAAGTTTCATGG-CAAGACG
* * * *
14464307 ACTCGTTTTATATTTTTCATGATTTTTGAAACTTTTTATGGTTCCGG---ATTTTTTAAAATTTT
384 ACTCGTTTTCTATTTTTCATGA-TTTTGAAAATTTTT-CGGTTCGGGTTTATTTTTTAAAATTTT
* *
14464369 TTCAGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
447 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
14464434 AAAAATTCAGCAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
512 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * * *
14464499 TCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATTTGAAATGCTCTTTAAGGGGGTGAG
577 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
14464564 AGTTCTCAAGGTTTG-TGAGGGATAGGGGGCTAATATAAGGGCCAAGTACCAGCACCCATCGCAC
642 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* ** * *
14464628 ATCATGTGCGCACACCCCCCTAGCCCCCCGATCACCGGAACCCCAATGTCGCCGATCAGGTTCTT
707 ATCATGTGCGCACACCCCCC-GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTT
* * * * * * *
14464693 CGACGATGCT-CTAGTGGTGGTGCCTCGCCGAAGAAAAATGCTGCACCAGCACATGCTCGAGCCC
771 CGACGATGCTCCGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * * * *
14464757 AGCATGTGCTCCCGCAACCCTCGGTCTGATTCAATCTTAGATTGGGAATGAACTTCGTACG
835 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
14464818 CTTTGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGGTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * * *
14464883 CGACCAGAGGGGCGGGATGCGCAAGCTGGGGATCGACCGGGTCCAACTCTGTGTGTTGCCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * *
14464948 TGCTGTCGCAACCCTCAGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
14465013 CTGACGAAATGAGCGGACGGGTGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGA
196 CCGACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
**
14465078 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATATCATTTTTATG
261 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* *
14465143 GCTTGTAAATTCATACAATGGTCCCTTAAGCTTTCTCGTGAAGTTTCATGGCAAGACGACTCGTT
326 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* ** *
14465208 TTCTATTTTTCATGATTTTCAAAATGTTCTGGGGTTCGGG---ATTTTTTAAAATTTTTTTGGAA
391 TTCTATTTTTCATGATTTTGAAAAT-TT-TTCGGTTCGGGTTTATTTTTTAAAATTTTTTCGGAA
* * * * *
14465270 GGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTTTTTGGCATGCATAAAAAAATT
454 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
14465335 CAGCTAAAAACTCGAAGTGTACAACATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCGGACA
519 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
14465399 CTTTAATGGCTAGTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTCTGAGTTCTC
584 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
*
14465464 -ATGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATG
649 GA-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * * *
14465527 TGCGCACACCCCCCGG-ACCCCGATTGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCTAT
713 TGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGAT
* *
14465591 GCTCCGACGATGGTGCCCCGACGAACAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG
778 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
** * *
14465656 CTGCCGCAACCCTCCATCCGGTCCGGTCTTAGACTGGGAATGAACTCTGTATG
843 CTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14465709 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCAACAAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * *
14465774 CGGCCAGAGGGGTAGGATGCGTAAGCCGGGGATCGGCCGAGTCCCCCTCTACGTGCTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTC-GATC
* * * * *** *
14465838 TTGTTGCCGTAACCC-CTTGTCCAATCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTC-GGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * * * **
14465902 AA-TTA-G--GCGGGCAGACGGGCGGGCACTACGCCGGCCAGAGAGACAAGATGCGCAAGCCGTG
194 AACCGACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* **
14465963 GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
14466028 TGGCTTGTAAATTCATACAAT-G--------G--TTC-CGT-AAGTTTCATGGCAAGACGACTCA
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * * *
14466080 TTTTCCATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGG---ATTTTTTAAATTTTTTTCAG
389 TTTTCTATTTTTCATGA-TTTTGAAAATTTTT-CGGTTCGGGTTTATTTTTTAAAATTTTTTCGG
* * * * *
14466142 AAGGAGTTTTGGCCTCAAACCTGGTAGACGTGATCATTTTATTTTTTTTGGCATGCACAAAAAAA
452 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
14466207 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGA
517 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
14466272 AACTTTAATGGCTACTAGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
14466337 TTGAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGGCCAAGTACCAGCACCCTTCGCACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* ** * *
14466402 GTGCGCACACCCCCCGGCCCACCCGATCGTTGGAACCCCAATGCCGTTGCTCAGGTTC-TCTGGC
712 GTGCGCACACCCCCCGGCCC-CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTC-GAC
* ** * * *
14466466 GATGCTCCGGCGATGGTGCCTGGGCGATGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGAAT
775 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
14466531 GTGCTGCCGCAACCCTAGGTCCGATCCGATCTTACACTGGGAATGAACTCCATATG
840 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
14466587 CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAATCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
14466652 CGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCTGGGTCCCCCTCTGCGTGCT-TTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * *
14466716 TACTACCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTTAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * **
14466781 CCGACGAAACGAGC-GAGCGGGTGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGTTGTGG
196 CCGACGAAACGAGCGGA-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* * *
14466845 ATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCAAATTTCTGCACGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
* * * *
14466910 GGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCACGGCAAGACGACTCCT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
14466975 TTTCTATTTTTCACGATTTTGAAATCTTTTTACGGTTCGAG---ATTTTTTAAAATTCTTTCGGA
390 TTTCTATTTTTCATGATTTTGAAA-ATTTTT-CGGTTCGGGTTTATTTTTTAAAATTTTTTCGGA
* * *
14467037 AGGAGTTTTGGCCTCAAACCTGGTAGACGTGATCCTTGAATTTTT-TTCGGCATGCACAAAAAAA
453 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAA
* *
14467101 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAA
517 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
14467166 CACTTTAACGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
14467231 TCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
14467295 GTGCGCACACCCCCCCAGCCCCCCCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGAT
712 GTGCGCACA-CCCCCC-GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGAC
* *
14467360 GATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTAT
775 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * * *
14467425 GTGCT-ACGCAACCCTCGGTCTGATTCGATCTTTGACTGGAAATGAACTCCGTATG
840 GTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
14467480 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCATGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * * *
14467545 AGGCCAGAGGGGCGGGATGCTCATGCCGGGGATTGGCCGGGTACCGCTCTTCGTGCTATCGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
** * * * *
14467610 TGCTGCCATAACCCTCGGTCGGGTCTGATCTTAGACTGGAAATGAATTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * * *
14467675 CTAACGAAACGAGCGGGTGGGCGGGCGGGCGGGAACTACTCCGGCCAGAGAGACGAGATGCGCAA
196 CCGACGAAACGAGC----GGACGGGCGGGC----ACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
14467740 GCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGTACATTTTCATATTTCTACATGCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
14467805 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACTTGAAGTTTCGTGGCAAGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * **
14467870 AACT-GTTTTCTATTTTTCATGATTTTTGAAACTTCTTGCGGTTCAAG---ATTTTTTAAAATTT
383 GACTCGTTTTCTATTTTTCATGA-TTTTGAAAATT-TTTCGGTTCGGGTTTATTTTTTAAAATTT
* * * * * *
14467931 TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTGGACATTATCCCTGTATTTTTGTTGGCATGTACA
446 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
*
14467996 AAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
511 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
**
14468061 TTCAGACACTTTAATTCCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
576 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
14468126 GAGTTCTCAAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGCCAAGTACCAGCACCCATCGCA
641 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
14468190 CATCATGTGCGCACACCCCCCCAGTCCCCCCGATCGCCGGAACCCCAATGCCG-C---C-GG---
706 CATCATGTGCGCACA-CCCCCC-GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTC
*
14468247 -T---C-A-G----GACGATGGTGCCCCAACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
769 TTCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * * * * *
14468302 CAACATGTGCTACCACAACCGTTGGTCTGATCCGATCTTTGACT-GGAATGAACTCTGTATG
834 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* ** * *
14468363 CTTAGACTGGGAATGAACTCCGTATCCCTAAGTCAACCCATAAAATGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * ** *
14468428 CGGCCAGAGGGGCAGGATGTGCAAGCCGGGGATTGGTCGGGTCCCCCTCTGCATGCTACCGATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
14468493 TACTACCGCAACCCTCAGTCTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
14468558 CCGATGAAACGTGCGGACGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGTGCAAGCCG
196 CCGACGAAACGAGCGGA----CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
*
14468623 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* * *
14468688 TATGGCCTGTAAATTCATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
14468753 C--ATT-T-TTTATCATGATTTTTAAAATTTTTTCTGTTCGGG---ATTTTTTTAAATTTTTTCG
387 CGTTTTCTATTTTTCATGATTTTGAAAA-TTTTTCGGTTCGGGTTTATTTTTTAAAATTTTTTCG
* * * * *
14468811 GAAGGCGTTTTGGCCCCAAACTTAGAAGACATGATCCTTGTATTTTTTTTGG-ACTGCACAAAAA
451 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAA
* * *
14468875 AATTCAGCCAAAAACTCGAAATGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCA
515 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
14468940 GACACTTTAATGGCTGCTGCCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGT
580 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
14469005 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATC
645 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** * * *
14469070 ACGTGCGCACACCCCCCTCGGCCCCCCCGATCCCCAGAACCCCAATGCCGCCGGTCCGGTTCTCC
710 ATGTGCGCACA-CCCCC-CGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTC
* * * *
14469135 GACGATGCTCCGGCAATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAA
772 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * *
14469200 TATGTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATG
837 CATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* ** *
14469259 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCTTATGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14469324 CGACCAGAGGGGCAGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGTGTGCTGTCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * *
14469389 TGCTGCCTGCAATCCTCTGTGTGGTCCAATCGTACACTGGGAATGAACTCTGTATGCCTAAGCCA
131 TGCTGCC-GCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * ** * *
14469454 ACCGATGAAACGTGC-GA---GCGGG--C-A-GGCGGCTAG-GTG--GGTTTAG-GTACA-TC-T
195 ACCGACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT-GCGCA-AGCCGT
** * *** * * * * * * *
14469505 ---TC-ATA---TTTTTGCGT--GCCAATGC-CATTTTTATGGCTTGTAAATTCAT-ACAATGGT
258 GGATCGATAGGGTGGTAG-GTGGGTTTAGGCACATCTTCAT--ATT-T--CTGCATGCCAAT-G-
* * * * * ***
14469559 CC---CTTAAGCCTTCACGTGAAATTTCATGGCAA-GACGACTCCCATTCTATTTTTCAC--G-A
315 CCATTTTTATGGCTT---GT-AAA-TTCAT-ACAATG--G--TCCC-TT-AAGCCTTCACGTGAA
*** * * * *
14469617 -TTTCA----AA-ACTTTTTGTGGTTCGTGATTTTTTA-GAATTTT----T--------TT--GG
368 GTTTCATGGCAAGACGACTCGT-TTTC-T-ATTTTTCATG-ATTTTGAAAATTTTTCGGTTCGGG
*
14469661 ------------AA--------G--GG-GTTTTGG-CCCAATACTTGGTAGACGTGATCCTTTTA
429 TTTATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA-ACTTGGTAGACGTGATCCTTGTA
*
14469702 TTTTTGTTGGCATGCACAAAAAAATTCAGCT--AAA----AAGTGTACAAGATTTTGTGACCAAT
493 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT
* *
14469761 TGACAAAAGTGTCCCTATTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
558 TGAAAAAAGTGTCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
*
14469826 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGACCAATATAAGGGCCA
622 ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
* * *
14469891 AGTAGCAGCACCAATCGCACATCATGTGCGTACACCCCCCCGGTCCCCCCGATCGTCGGAACCCC
687 AGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCGTCGGAACCCC
*
14469956 AATGCCACCGGTCAGG----T------T-CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
750 AATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGC
* *
14470010 ACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAA-CC-C--T-C-G---G-TC-----C---
815 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGG
14470057 -----AAC-CCG-AT-
880 GAATGAACTCCGTATG
* * * * *
14470065 CTTAGATTGGGAATGAACTTCGAATGCCTAAGTCAACCTATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * ** ** *
14470130 CGGCCAGAGGGAAGGGATACGTAAGCCGGCGATTGGTCGGGT-CCCCTCTGCGTGCTACCTATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * * * *
14470194 TAC-GTCGCAACCCTGGGTCCGGTCCAATCTTAGATTGGGAATGAACTCCGTAAGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
14470258 CCGATGAACCGAGCGGGCGGGTGAGCGGGCGGGTGAACGGACGGGCGGGCACTACGCCGGCCAGA
196 CCGACGAA---A-----C----GA----------G--CGGACGGGCGGGCACTACGCCGGCCAGA
* ** *
14470323 GAGACGGGATGCACAAGCCGTGGATCGATATAGTGGTAGGTGGGTTTAGGCACGTCTTCATATTT
237 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATA-TT
* *
14470388 TCTG-TTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATG
301 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * ** *
14470452 AAATTTCATGGCAAGACGACTC-TCGTTCTATTTTTCACGA-TTACAAAACTTTTTGTGGTTC--
366 AAGTTTCATGGCAAGACGACTCGT-TTTCTATTTTTCATGATTTTGAAAA-TTTTT-CGGTTCGG
* * * * *
14470513 G-TGATTTTTTAGAATTTTTTTGGAAAGGGGTTTTGG-CCCAATACTTGGTAGACGTGATCCTTT
428 GTTTATTTTTTAAAATTTTTTCGG-AAGGAGTTTTGGCCCCAA-ACTTGGTAGACGTGATCCTTG
*
14470576 TATTTTTGTTGGCATGCACAAAAAAATTTAGCT--AAA----AAGTGTACAAGATTTTGTGACCA
491 TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
14470635 CTTGACAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
556 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
* *
14470700 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCACTATAACGGCC
621 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* * * *
14470765 AAGTACCAGCACCCATCACACATCATGTGCACACACCCCCCGAACCCCCCCCGATCG-CTAGAAC
686 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG---GCCCCCCGATCGTC-GGAAC
** * * * *
14470829 CCCAATATCGTCGGTCA-G--CTT---C--T-CT-AG-CAATGGTAAG-CCGGA-GAAGAAAAAT
747 CCCAATGCCGCCGGTCAGGTTCTTCGACGATGCTCCGACGATGGT--GCCCCGACGAAGAAAAAT
* *
14470881 GCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAA-CC-C--T-CGGTCCG-TC----
810 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAG
14470936 -C---G-AT---CT---TA--
875 ACTGGGAATGAACTCCGTATG
* * * *
14470944 ---A-ACTGGGAATGAACTCCGTATGCCTAAGCCAACCCACGAAATGAGCGTGCGGGCGCTCGGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
14471005 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATC-AGTCGGGTCCCCCTTTACGTGCTG-CTGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCGTGCTGTC-GAT
* * * ** **
14471068 CCTGCTGTCGCAACCCTCGGTCTGATCCAATCTTAGACTAAGAATGAACTTTGTATGCCTAAGCC
129 CCTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
14471133 AAACGACAAAACGAGCGGGCGGGTGGGCACTACGCCAGCCAGAGAGACGGGATGCGCAAGCCATA
194 AACCGACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
** *
14471198 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATTCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
14471263 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * *
14471328 TTTTCTATTTTTCATGATTTTTCAAACTTTTTACGGTTCGAG---ATTTCTTAAAATTTTTTCGG
389 TTTTCTATTTTTCATGA-TTTTGAAAATTTTT-CGGTTCGGGTTTATTTTTTAAAATTTTTTCGG
** * * * ** * *
14471390 AAGGAGTTTTCACCCCAAACCTGGTAGATGTGATCCTCGTATTTTTGTTGGTGTGCATAAAAAGA
452 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
14471455 TCCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTTCAGA
517 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
14471520 CACTTTAACGGCTACTGGCAGCAAATCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
14471585 CCGAGGCTTGATGAGGGATAGGGGGCGAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
14471650 GTGCGCACA-CCCCCGGCCCACCCGATCG-CTGGAACCCCAATGCCGCTC-GTCAGGTTCTTCGA
712 GTGCGCACACCCCCCGGCCC-CCCGATCGTC-GGAACCCCAATGCCGC-CGGTCAGGTTCTTCGA
* * * *
14471712 CCATGCTCCAACGATGGTGCCCCGACGAAGAAAAATACGGTACCAGCACATGCCCGAGCCCAGCA
774 CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * * * *
14471777 TGTGCTGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGAGATTGAACTCCATATT
839 TGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14471834 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCATC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * *
14471899 CGACCAGAGGGCCAAGATGCGCAAGCCGGGAATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * *
14471964 TGCTGGCGCAACCCTCGGTCCAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCTAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
14472029 CCGACGAAACGAGCGGGCGGTCGGGCGGGTGTCCACTACGCCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGA----GCGGACGGGC-GG-G--CACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
14472094 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCGA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
14472159 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
14472224 GACTCGTTTTCTGTTTTTCATGATTTTTGAAACTTTTTACGGGTTCGGG---ATTTTGTAAAATT
383 GACTCGTTTTCTATTTTTCATGA-TTTTGAAAATTTTT-C-GGTTCGGGTTTATTTTTTAAAATT
* * * *
14472286 TTTTCGGAAGGATTTTTGGCCCGAAAGTTGGTGGACGTGATCCTTGTA-TTTTGTTGGCATGCAC
445 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
14472350 AAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCTA
510 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
14472415 TTTCAAACACTTTAACGGCTACTGGCAGCAAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTG
575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
14472480 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
640 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
14472545 ACATCATGTGCGCACACGCCCCCGGCCCCCCCGATGGTCAGAACCCCAATTCCACCGATCAGGTT
705 ACATCATGTGCGCACAC-CCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
** ** * ** * ** *
14472610 CCCCGGTGATGCTCCGGCGATGGTGCCCCGGTGAAG-AAAATGCGGCAGCAGCGTATGACCGAGC
768 CTTCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * *** *
14472674 CCAGCATGTGCTTCCGTAACCCTTAATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
833 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *** * *
14472737 CTTAGACTGGGAAGGAACTCTAAATGCTTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
14472802 TGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGATCGAGTCCCCCTCTGCATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *** * *
14472867 AGCTACCGTAACCCTCGATCCAATCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCGAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
14472932 CCGACGAAACGAGCGGGCGGACGGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAG
196 CCGACGAAACGA----GCGGAC--G-GG-CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * **
14472997 GCCATCGATCGATAGGGTGGCAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
14473062 -TTTTATGGCTTGTAAATTGATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
14473126 GACTCGTTTTCTATTTTTCAAGATTTTCAAAACTTGTTACGGTTCGGG---ACTTTTAAAAATTT
383 GACTCGTTTTCTATTTTTCATGATTTTGAAAA-TT-TTTCGGTTCGGGTTTATTTTTTAAAATTT
* * * *
14473188 TTTCGAAAGGCA-TTTTGGCCCAAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCAC
446 TTTCGGAAGG-AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* *
14473252 AAACAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTA
510 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * * *
14473317 TTTCAAACAGTTTAACGGCTACTGGCAGCAAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTG
575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * *
14473382 TGAGTTCTCAAGGTTTGGTGAGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCGC
640 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * *
14473447 ACATCATGTGCGTACACCCCCCCGGCCCCCCTTATCG-CCGAACCCAAATGCCGTCC-GTCAGGT
705 ACATCATGTGCGCACA-CCCCCCGGCCCCCC-GATCGTCGGAACCCCAATGCCG-CCGGTCAGGT
* * * * *
14473510 TC-TC--CGA-----CGA--A-GGTGCCTCGGCGATGAAAAATACGGCACCAACACATGCCCGAG
767 TCTTCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * *
14473564 CCCAGCATGTGCTGCCGCAACTCTCGGTCCGGTCCGATCTTACACTTGGAATGAACTTCGTATG
832 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
14473628 CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAATCCATGAAACGAGCGTGCGGACGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * *
14473693 CGGCCAGAAAGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCTCCTCTGCGTCCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* * * * *
14473758 TACTACCGAAACGCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * * * *
14473823 TCGATGAAACGAGCGGGCAGGGGGGTGGGCACTATGCCAGCCAGGGAGACGCGATGCGCAAGCCG
196 CCGACGAAACGAGC-GG-A--CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* ***
14473888 TGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTT
* *
14473953 TATGGCTTTTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * *
14474018 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTTGGG---ATTTTTTTAAATTTTTTC
387 CGTTTTCTATTTTTCATGA-TTTTGAAAATTTTT-CGGTTCGGGTTTATTTTTTAAAATTTTTTC
* * * *
14474080 GGAAGGAGTTTTGGGCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTTGGCTTGCACAAAAA
450 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * * **
14474145 AATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTGACCATTTAAAAAAAAATTTCCTTATTTC
515 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTTC
*
14474210 AGACACTTTAATGGCTACTGGCAGAAAACCT-TAAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
579 AGACACTTTAATGGCTACTGGCAGCAAACCTGT-AAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
14474274 GTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACA
643 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
14474339 TCATGTGCGCACA--------CCCCCCGATCGTTGGAACCCCAATGCCGTCGGTCAGGTTC-TCT
708 TCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTC-
* * * * *
14474395 GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGACACTAGCACATGCCCGAGCCCAT
772 GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * * *
14474460 TATGTGCTACCGCAACCCTCAGTTCC-GTCCGATCTTAGACTGGGAATTATCTCCGTATG
837 CATGTGCTGCCGCAACCCTC-GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
** * * *
14474519 CTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGAGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
14474584 CGGCCAGCGGGGTGGGATGCACAAGCCGGGGATC-ACCCGGGTCCCCCTCTGCGTGCTGCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * ** *
14474648 TTGCTGCCGCAACCCTTGATCCGGTTTGATCTTAGACTGGGAATGAACTCCGTGTGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
14474713 ACCTACGAAACGAGCGGACGGACGGGCAGACCGACGGGCGGGCACTACACCGGCCTGAGAGACGG
195 A-C--CG--ACGA----A---AC--G-AG-CGGACGGGCGGGCACTACGCCGGCCAGAGAGACGG
* * * **
14474778 GATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTATGTGTG
244 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* * * *
14474843 CCAACGCCATTTTTATGGCTTGTAAATACATACAACGTTCCCTTAAGCCTTCACGTGAAGTTTCA
309 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * * * *
14474908 TGGCGAGGCGACTCGTTTTCTATTTTTCATGATTTTTGCAACTTTTTGAGGTTCGGG---ATTTT
374 TGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTGAAAATTTTT-CGGTTCGGGTTTATTTT
* ** *
14474970 TTAAAATTTCTTCGGAAGGAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTT
437 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* * *
14475035 GCATGCACAAACAAATTCACCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
502 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
** *
14475100 TGTCTGCATTTCAGGCACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
567 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
* *
14475165 AGGGGGTGTGAGTTCTCGAGGTATAATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
632 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* * * * *
14475230 CCCATCACACATCTTGTGCGCATACCCCTCGGCCCCCCCGATCGTCGGAAGCCCAATGCCGCCGG
697 CCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGG
* * * * * *
14475295 TTAGGTTCTT------TG----G-TGATGGTGCCCC-AGCAAAGAAAAATGTGGTATCAGCACAT
761 TCAGGTTCTTCGACGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACAT
* * *
14475348 GCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCCGATCTTAGACTGAGAATGAACTC
825 GCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTC
14475413 CGTATG
890 CGTATG
* * ** *
14475419 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGTAGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * *
14475484 CGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGCTAGGTCCCACTCTGCATGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
* ** * * * *
14475549 TGCTACCGCAACCCTCGGTCCAGTCCAATCTCAGACTGGGAATGAACTTCGTATGCCTAACCCAA
131 TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
14475614 CCGACGAAACGAACGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAAAGAGATGTGATGCGCAA
196 CCGACGAAACG-A---GC--G-GA-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
14475679 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTCCATTCCAATGCCA
253 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
14475744 TTTTTATGGCTTGTAAATTCATACAATGATCCCGTAAGCCTTCACGTGAAGTTTCATGGCAGGAC
318 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * * **
14475809 AACTCGTTTTCCATTTTTCAGGATTTTCAAAACATTTTACGGTTTAGG---ATTTTTTAAAATTT
383 GACTCGTTTTCTATTTTTCATGATTTT-GAAA-ATTTTTCGGTTCGGGTTTATTTTTTAAAATTT
* * * * *
14475871 TTTTGGAAGGA-TTTTTGCCCCTGAACTTGGTACATGTGATCCTTGCATATTTTT-TT-GCATGC
446 TTTCGGAAGGAGTTTTGGCCCC-AAACTTGGTAGACGTGATCCTTG--TATTTTTGTTGGCATGC
14475933 AC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
508 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
14475997 CATTTCAGACACTGTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
573 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * * *
14476062 TGTCAGTTCTCAAGGTTTGATGAGGGATAGGGGGACAATATAAGGGCCAGGTACCAGCACCCATC
638 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
*
14476127 GCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGT
703 GCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGT
* * * * * *
14476192 T-ATCTGGCGAAGCTCCGTCGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGA
767 TCTTC-GACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* *
14476256 GCCCAGCATGTGCTACCGCAA----C---CC--TCAG-TC-----C---G---G---TCCG-AT-
831 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
14476295 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGAGTGCTCTGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG-
* * * * * * * * ** *
14476360 CC-TCTAGA-AGGCGGGATGCACAAGTCGAGGATCGACTGGGTCCCACTCTGCGTGCTACCAATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATC
* * * * *
14476423 CTGCTGCTGCAACCCTCAGTCTGGTTCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
14476488 ATCGACGAAACGAGCGGGCGGGCGGGCACTACGTCGGCCCGAGAGACGGGATGCGCAAGCCATGG
195 ACCGACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
14476553 ATCGATAGGGTGGTTA-GTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
260 ATCGATAGGGTGG-TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
14476617 TGCCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * ** *
14476682 TTTCCTATTTTTCACGATTTTTAAAACTTTTTACGGTTCAGG---ATTTTTTAAAATTTCGTCGA
389 TTTTCTATTTTTCATGATTTTGAAAA-TTTTT-CGGTTCGGGTTTATTTTTTAAAATTTTTTCGG
* * *
14476744 AAGGTGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACA
452 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
** * * *
14476809 TTCAGCTAAAAACTCGAACCGAACAAGATTTTGTGACCATTTCAAAAAAGTGTTCCCATTTCAGA
517 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
14476874 CACTTTAATTGCTACTAGCAGTAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
14476938 TCGAGGTTTGATGAGCGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCAT
647 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
14477003 ATACGCACACC
712 GTGCGCACACC
14477014 ATTTTTATGG
Statistics
Matches: 11243, Mismatches: 1424, Indels: 895
0.83 0.10 0.07
Matches are distributed among these distances:
803 56 0.00
804 2 0.00
805 20 0.00
806 90 0.01
807 2 0.00
808 3 0.00
809 3 0.00
811 1 0.00
815 1 0.00
817 1 0.00
822 2 0.00
823 1 0.00
825 1 0.00
826 1 0.00
827 2 0.00
828 3 0.00
830 1 0.00
831 7 0.00
832 65 0.01
833 2 0.00
834 7 0.00
835 9 0.00
836 7 0.00
837 3 0.00
838 11 0.00
839 6 0.00
840 14 0.00
841 5 0.00
842 13 0.00
843 80 0.01
844 148 0.01
845 9 0.00
846 4 0.00
847 9 0.00
848 11 0.00
849 53 0.00
850 3 0.00
852 7 0.00
853 229 0.02
854 33 0.00
855 13 0.00
856 27 0.00
857 2 0.00
858 6 0.00
859 178 0.02
860 2 0.00
862 1 0.00
864 3 0.00
865 13 0.00
866 13 0.00
867 369 0.03
868 124 0.01
869 5 0.00
871 5 0.00
872 15 0.00
873 7 0.00
874 192 0.02
875 674 0.06
876 405 0.04
877 164 0.01
878 273 0.02
879 160 0.01
880 45 0.00
881 131 0.01
882 17 0.00
883 267 0.02
884 44 0.00
885 10 0.00
886 10 0.00
887 226 0.02
888 223 0.02
889 165 0.01
890 21 0.00
891 1048 0.09
892 244 0.02
893 364 0.03
894 955 0.08
895 97 0.01
896 140 0.01
897 83 0.01
898 254 0.02
899 14 0.00
900 262 0.02
901 423 0.04
902 1095 0.10
903 796 0.07
904 480 0.04
905 22 0.00
906 8 0.00
907 6 0.00
908 180 0.02
911 36 0.00
912 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (895 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCC
TGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGACGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTGAAAATTTTTCGGTTCGGGTTTATTTTTTAAAATTTTTTCGGAAGG
AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
GCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTTCGACGATGCT
CCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:14465721 original size:26 final size:26
Alignment explanation
Indices: 14465683--14465735 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14465673 CCGGTCCGGT
* *
14465683 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14465709 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14465735 C
1 C
14465736 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:14466597 original size:26 final size:26
Alignment explanation
Indices: 14466561--14466616 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
14466551 CCGATCCGAT
14466561 CTTACACTGGGAATGAACTCCATATG
1 CTTACACTGGGAATGAACTCCATATG
* *
14466587 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCATATG
14466613 CTTA
1 CTTA
14466617 AGTCAATCCA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.29, C:0.21, G:0.21, T:0.29
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCATATG
Found at i:14469262 original size:26 final size:26
Alignment explanation
Indices: 14469233--14469285 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
14469223 CCGGTCTGAT
14469233 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
14469259 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
14469285 C
1 C
14469286 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Done.