Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167937.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_2, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 35885061
ACGTcount: A:0.32, C:0.18, G:0.18, T:0.32
Warning! 165000 characters in sequence are not A, C, G, or T
File 97 of 195
Found at i:17621460 original size:26 final size:26
Alignment explanation
Indices: 17621424--17621476 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17621414 GTTCACTTAG
*
17621424 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
**
17621450 GCATACGGAGTTTTTTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17621476 G
1 G
17621477 ATCGGAATGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17622349 original size:26 final size:26
Alignment explanation
Indices: 17622320--17622372 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17622310 GTTGACATAG
17622320 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17622346 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17622372 G
1 G
17622373 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17624287 original size:731 final size:734
Alignment explanation
Indices: 17623140--17624611 Score: 2130
Period size: 731 Copynumber: 2.0 Consensus size: 734
17623130 AACCTGACCG
* ** *
17623140 ACGGCATTGGGGTTCCGGTGATAGGGGGCTGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTG
1 ACGG-ATTGGGGTTCCGGTGATAGGGGGCGGGGGGGTGTGCGCACATGATGTACGATGGGTACTG
* * * * * *
17623205 GTACTTGGCCCTTCTATTAGCCCCTTATCCGTCATCAAACCTCGAGAACTCATACCCCCTTAAAG
65 GTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACACCCTTAAAG
* * *
17623270 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTT
130 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTGAAATGGAGACACTTTT
* *
17623335 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
195 TTCAAATGGCCAAAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * * * * *
17623400 AAAATACAAGTATGACGTCCACCAAGTTTGGGGCCAAAATTCCTTTCGAAAAAATTATAAAAAAT
260 AAAATACAAGGATCACATCCACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTATAAAAAAT
** *
17623465 CCCGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCTTGAAACTT
325 CCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * * *
17623530 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTTGCGTGTAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTAACAAGCCATAAAAATGGCATTCGCATGCAGA
* *
17623595 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCAACGGCTTGCACATCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCAACCACCCTATCAATCAACGGCTTGCACATCCCGTCTCC
*
17623660 CTGGCCGGCGTAGTG-C-C-CACCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATACAGAGTTC
520 CTGGCCGACGTAGTGCCGCTCACCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATACAGAGTTC
* *** * * * *
17623722 ATTCCTAGTCTAAGATCAGATTGGATCGAGGGTTGTGGCAGCAGGATC-GACAGCACGCAGAGGG
585 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCAGGATCAG-CAGCACACAGAGGG
* * * * *
17623786 GGAGCCGATCGATCCCCAACATG-TGCATCCCGCCCCTCTGGTCGGCTGCGCACCCGTACACTCG
649 GGACCCGACCGATCCCCAACATGCT-CATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCG
*
17623850 TTTCGTGGGTTGACTTAGGCGT
713 TTTCGTGGGTTGACTTAGGCAT
17623872 ACGGATTGGGGTTCCGGTGATCAGGGGGTCGGGGGGGTGTGCGCACATGATGTACGATGGGTACT
1 ACGGATTGGGGTTCCGGTGAT-AGGGGG-CGGGGGGGTGTGCGCACATGATGTACGATGGGTACT
*
17623937 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACACCCTTAAA
64 GGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACACCCTTAAA
17624002 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTGAAATGGAGACACTTT
129 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTGAAATGGAGACACTTT
* * *
17624067 TTTC-AATGGCCAAAAAATCTTGTACCCTTCGAGTTTTTAGCTG-ATTTTTTTGTGCATGCCCAC
194 TTTCAAATGGCCAAAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
* *
17624130 AAAAATACAAGGATCACATCTACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
259 AAAAATACAAGGATCACATCCACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTATAAAAAA
* ** * *
17624195 TCCTGAACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACT
324 TCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * *
17624260 TGATGTGAAGGCTTAAGGGAGCATTGTATGAATTAACAAGCCATAAAAATGGCATTCGCATGCAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTAACAAGCCATAAAAATGGCATTCGCATGCAG
* * *
17624325 AAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCAATCAACGGCTTGCACATCCCGTCTC
* ** *
17624390 CCTGGCCGACGTAGTGCCCGCTCGCCCGCCCGCTTGTTTCATCGGTTGGCTTAGGCATACGGAGT
519 CCTGGCCGACGTAGTG-CCGCTCACCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATACAGAGT
* * *
17624455 TCATTCCCAGTCTCAGATCAGACCAGACCGAGGGTTGCGATAGCAGGATCAGCAGCACACGGAGG
583 TCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCAGGATCAGCAGCACACAGAGG
*** * * * * * * *
17624520 GGGACCCGACCGATCCCTGGCTTGCTCATCCTGCCCTTCTGGCCTGCTGAGCGCCCGCACGCTCT
648 GGGACCCGACCGATCCCCAACATGCTCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCG
17624585 TTTCGTGGGTTGACTTAGGCAT
713 TTTCGTGGGTTGACTTAGGCAT
17624607 ACGGA
1 ACGGA
17624612 GTTCATTCCT
Statistics
Matches: 653, Mismatches: 79, Indels: 13
0.88 0.11 0.02
Matches are distributed among these distances:
731 282 0.43
732 46 0.07
733 157 0.24
734 1 0.00
735 165 0.25
736 2 0.00
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.26
Consensus pattern (734 bp):
ACGGATTGGGGTTCCGGTGATAGGGGGCGGGGGGGTGTGCGCACATGATGTACGATGGGTACTGG
TACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACACCCTTAAAGA
GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTGAAATGGAGACACTTTTT
TCAAATGGCCAAAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
AAATACAAGGATCACATCCACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTATAAAAAATC
CCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
ACGTGAAGGCTTAAGGGACCATTGTATGAATTAACAAGCCATAAAAATGGCATTCGCATGCAGAA
ATATGAAGATGTGCCTAAACCCACCAACCACCCTATCAATCAACGGCTTGCACATCCCGTCTCCC
TGGCCGACGTAGTGCCGCTCACCCGCCCGCTCATTTCATCGGTTGGCTTAGGCATACAGAGTTCA
TTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCAGGATCAGCAGCACACAGAGGGGG
ACCCGACCGATCCCCAACATGCTCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACACTCGTTT
CGTGGGTTGACTTAGGCAT
Found at i:17625501 original size:26 final size:26
Alignment explanation
Indices: 17625471--17625523 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17625461 GTTGACTTAG
*
17625471 GCATAAGGAGTTCATTCCCAATCTAA
1 GCATAAGAAGTTCATTCCCAATCTAA
* *
17625497 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATAAGAAGTTCATTCCCAATCTAA
17625523 G
1 G
17625524 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATAAGAAGTTCATTCCCAATCTAA
Found at i:17625817 original size:894 final size:893
Alignment explanation
Indices: 17623876--17628822 Score: 7086
Period size: 895 Copynumber: 5.6 Consensus size: 893
17623866 AGGCGTACGG
** * * * * * * * *
17623876 ATTGGGGTTCCGGTGATCAGGGGGTCGGGGGGGTGTGCGCACATGATGTACGATGGGTACTGGTA
1 ATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGTA
*
17623941 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACACCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
* * * * *
17624006 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCTG-AAATGGAGACACTTTTTT
131 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGG-GACACTTTTTT
* * * * * * *
17624070 C-AATGGCCAAAAAATCTTGTACCCTTCGAGTTTTTAGCT-GATTTTTTTGTGCATGCCCACAAA
195 CAAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAA
* * *
17624133 AATACAAGGATCACA-TCTACAAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
260 AATACAAGGAT-AAAGTCTACCAAGTTTGGGGCTAAAACTCCTTCC-AAAAAATTTTAAAAAATC
* * ** * * *
17624197 CTGAACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTG
323 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * * * *
17624262 ATGTGAAGGCTTAAGGGAGCATTGTATGAATTAACAAGCCATAAAAATGGCATTCGCATGCAGAA
388 ACGTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
* *
17624327 ATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCCC
453 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* * *
17624392 TGGCCGA-CGTAGTGCCCGCTCGCCCGCCCGCTTGTTTCATCGGTTGGCTTAGGCATACGGAGTT
518 T-GTC-ATCGTAGTG--C-C-CGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTT
* * * * ** * * * ** * *
17624456 CATTCCCAGTCTCAGATCAGACCAGACCGAGGGTTGCGATAGCAGGATCAGCAGCACACGGAGGG
577 CATTCCTAGTCTAAGATCGGACCAGACCAAGGGTTATGACAACAGGATCAACAGCAGGCAGAGGT
* *** * * * * * * *
17624521 GGACCCGACCGATCCCTGGCTTGCTCATCCTGCCCTTCTGGCCTGCTGAGCGCCCGCACGCTCTT
642 GGACCCGACTGATCCCCAACCTGCGCTTCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGT
* * *
17624586 TTCGTGGGTTGACTTAGGCATACGGAGTTCATT--C---CT-AG--T-CTAAG---ATT----G-
707 TTCATGGGTTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGT
* ** *** ** * *
17624634 ----GA-C---C-AGACCGAGGGTTGCCACAGCACATGCTGTTCTCGGGCATGTACTGGTGCCGC
772 CTAAGATCGGACTGGACCGAGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGC
17624690 ATTTTTCTTCATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTGGC
837 ATTTTTCTTCATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTGGC
17624747 ATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGTA
1 ATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGTA
17624812 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
17624877 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
131 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
*
17624942 AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAGAA
196 AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAAA
*
17625007 ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTGCTTCCAAAACAATTTTAAAAAATCCC
261 ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTCCTTCCAAAA-AATTTTAAAAAATCCC
17625072 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
325 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
*
17625137 GTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCTTAAAAATGGCATTGGCATGCAGAAAT
390 GTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
17625202 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
455 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
17625267 TCATCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCATTCCTA
520 TCATCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCATTCCTA
17625332 GTCTAAGATCGGACCAGACCAAGGGTTATGACAACAGGATCAACAGCAGGCAGAGGTGGACCCGA
585 GTCTAAGATCGGACCAGACCAAGGGTTATGACAACAGGATCAACAGCAGGCAGAGGTGGACCCGA
*
17625397 CTGATCCCCAACCTGCACTTCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGG
650 CTGATCCCCAACCTGCGCTTCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGG
17625462 TTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC
715 TTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC
*
17625527 GGACTGGACCGAGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCT
780 GGACTGGACCGAGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCT
17625592 TCATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTGGC
845 TCATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTGGC
* *
17625641 ATTGGGGTTCTGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTACTGGTA
1 ATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGTA
17625706 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
17625771 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
131 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
*
17625836 AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAGAA
196 AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAAA
*
17625901 ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTGCTTCCAAAACAATTTTAAAAAATCCC
261 ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTCCTTCCAAAA-AATTTTAAAAAATCCC
17625966 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
325 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
*
17626031 GTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCTTAAAAATGGCATTGGGCATGCAGAAA
390 GTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT-GGCATGCAGAAA
*
17626096 TATGAAGATGTGCCTGAACCCACCTACCACCGCCTATCGAGTCCACGGCATTGCGCATCCCGTCT
454 TATGAAGATGTGCCTAAACCCACCTACCA-C-CCTATCGA-TCCACGGC-TTGCGCATCCCGTCT
*
17626161 CTC-GTCATCAG-AGTGCCCGCCCGCCCGCTCGTTTTCATCGGTTTTCTTAGGCATACGGAGTTC
515 CTCTGTCATC-GTAGTGCCCGCCCGCCCGCTCG-TTTCATCGGTTGTCTTAGGCATACGGAGTTC
*
17626224 A-TCCTAGGTCTAAGATCCGGACCAGACCAAGGGTTATGGACAACAGGATCAATTAGCAGGCAGA
578 ATTCCTA-GTCTAAGAT-CGGACCAGACCAAGGGTTAT-GACAACAGGATCAA-CAGCAGGCAGA
* *
17626288 GGTGGACGCGACTGATCCCCAACCTGC-CGTTCCCGCCCCTCTGGCCGGTCTGAGCGCGCGCACG
639 GGTGGACCCGACTGATCCCCAACCTGCGC-TTCCCGCCCCTCTGGCCGG-CTGAGCGCCCGCACG
*
17626352 TTCGGTTTCATGGGTTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCTATACGAAGTTCAT
702 CTC-GTTTCATGGGTTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGC-ATACGAAGTTCAT
17626417 TCCCCAGTCTAAGATCGGACTGGACCGAAGCATTGCGGTAGCACATGCT-GGC-CA-GCATGT-C
765 T-CCCAGTCTAAGATCGGACTGGACCG-AGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGC
* *
17626478 TTGTGCCG-ATTTTTTCTTCATCGGGGCACCATCATCGGAGCATCGTCAGAG-AGC-GACCGGTG
828 TGGTGCCGCA-TTTTTCTTCATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTG
17626540 GC
892 GC
*
17626542 ATTGGGGTTCCGACGATC---GGGG--GGGAGGTGTG-ACACATGATGTGCAATGGTTGCTGGTA
1 ATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGTA
17626601 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
17626666 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
131 ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
*
17626731 AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAGAA
196 AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAAA
* *
17626796 ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTGCTTCCAAAACAATTTTAAAAAATCTC
261 ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTCCTTCCAAAA-AATTTTAAAAAATCCC
17626861 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
325 GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
*
17626926 GTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCTTAAAAATGGCATTGGCATGCAGAAAT
390 GTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
17626991 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
455 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
17627056 TCATCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCATTCCTA
520 TCATCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCATTCCTA
17627121 GTCTAAGATCGGACCAGACCAAGGGTTATGACAACAGGATCAACAGCAGGCAGAGGTGGACCCGA
585 GTCTAAGATCGGACCAGACCAAGGGTTATGACAACAGGATCAACAGCAGGCAGAGGTGGACCCGA
* *
17627186 CTGATCCCCAACCTGCGCTTCTCGCCGCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGG
650 CTGATCCCCAACCTGCGCTTCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGG
17627251 TTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC
715 TTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC
* *
17627316 GGACTGGACCGAGCATTGCGGTAGCACATGCTAGGCTCAGGCATGTGCTGGTGCCGTATTTTTCT
780 GGACTGGACCGAGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCT
* * *
17627381 TCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGGTGGC
845 TCATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTGGC
* * * *
17627430 ATTGGGGTTCCGACAAACGGGGGGGCCGGGGGGGTATGCGCACATGATGTGCAATGGTTGCTGGT
1 ATTGGGGTTCCGACGATCGGGGGGGCC-GGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGT
17627495 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAG
65 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAG
* * * ** * ** *
17627560 CATTTGCGAATTTATAGGTCTGCTGGCAGTAGCCATTAAAGTGTTTAAAATGGGGACACTTTTTT
130 CATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTT
* * * * * * *
17627625 CAAATGGTCACAAAATCTTGTACACTTCGAGGTTTTAGCTTAATTTTTTTGTGCAAGCCAAAAAA
195 CAAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAA
** * * *
17627690 AATACAAGGATCTCA-TCTACCAAGTTCGGGGCCAAAACTCCTTACGAAAAAATTTTAAAAAATC
260 AATACAAGGAT-AAAGTCTACCAAGTTTGGGGCTAAAACTCCTT-CCAAAAAATTTTAAAAAATC
* * * *
17627754 TCGAAGCGTAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
323 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * * *
17627819 ACGTGAAGGCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAATGGCATTGACAAGCAGAA
388 ACGTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
*
17627884 ATATGAAGATGTGCCTAGACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
453 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* *
17627949 TGCCGTCGTAGTGCCTGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCA
518 TGTCATCGTA--G--TGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCA
* * * ** * * *
17628014 TTCCCAGTCTAAGATCAGACCAGACCAAGGGTTA-CAGCAGTAGGATCAATAGCACGCAGAGGGG
579 TTCCTAGTCTAAGATCGGACCAGACCAAGGGTTATGA-CAACAGGATCAACAGCAGGCAGAGGTG
* * * * * * * * **
17628078 GACTCGACCGATCCCCGACCTGCGCTTTCCACCCCTTTGGTCGGCTGAGTGCCTACACGCTCGTT
643 GACCCGACTGATCCCCAACCTGCGCTTCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTT
*
17628143 TCATGAGTTGA-TT-----T-A-G-G--CA-T----A-C---G-----G-AGTTCATTCCCAGTC
708 TCATGGGTTGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGTC
* * * *
17628182 TAAGATCGGACCGGACCGAGCATTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGTA
773 TAAGATCGGACTGGACCGAGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCA
* * * * * **
17628247 TTTTTCTGCGTCAGGGCACCATC-GCTGGAGTATCGTTGGAGAACCTGACCGGTGGC
838 TTTTTCTTCATCGGGGCACCATCATC-GGAGCATCGTCAGAGAACCTGACCGGTGGC
*
17628303 ATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCAATGGTTGCTGGT
1 ATTGGGGTTCCGACGATCGGGGGGGCC-GGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGT
*
17628368 ACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTCAAGAACTCACA-CCCCTTAAAGAG
65 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAG
* * * ** * * *
17628432 CATTTGAGATTTTATAGGTTTGCTGTCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTT
130 CATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTT
* * * * * *
17628497 CAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAA
195 CAAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAA
* * * *
17628562 AATACAAGGATCACGTCTAGCAAGTTTGGGG-TAGAAACCCCTTCCGAAAAAATTTTAAAAAATC
260 AATACAAGGATAAAGTCTACCAAGTTTGGGGCTA-AAACTCCTTCC-AAAAAATTTTAAAAAATC
* * * * *
17628626 CCAAACCACAAAAAGTTTCGAAAATCATGAAAAATGGAAAACGAGTCGTCTTGCCATGAAACTTA
323 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* *
17628691 ACGTGAAGCCTTAAGGGACCATCGTATGAATTTGCAAGCCATAAAAATGGCATTGGGACAT--AG
388 ACGTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT-GG-CATGCAG
* *
17628754 AAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTTTC
451 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
17628819 TCTG
516 TCTG
17628823 GCCGACGGCC
Statistics
Matches: 3775, Mismatches: 220, Indels: 161
0.91 0.05 0.04
Matches are distributed among these distances:
868 179 0.05
869 1 0.00
870 2 0.00
871 176 0.05
872 412 0.11
873 495 0.13
874 5 0.00
876 1 0.00
877 4 0.00
879 1 0.00
880 3 0.00
882 22 0.01
883 29 0.01
884 17 0.00
885 53 0.01
886 62 0.02
887 57 0.02
888 43 0.01
889 22 0.01
890 61 0.02
891 44 0.01
892 9 0.00
893 3 0.00
894 586 0.16
895 888 0.24
896 17 0.00
897 9 0.00
898 46 0.01
899 226 0.06
900 20 0.01
901 42 0.01
902 58 0.02
903 64 0.02
904 53 0.01
905 16 0.00
906 28 0.01
907 21 0.01
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.25
Consensus pattern (893 bp):
ATTGGGGTTCCGACGATCGGGGGGGCCGGGAGGTGTGCGCACATGATGTGCAATGGTTGCTGGTA
CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGC
ATTTGTGATTTTACAGGTCTGCTACCAGTAGCCATTAAAGTGTCTGCAATTGGGACACTTTTTTC
AAATGGTCACAAAATATTGTACGCTTCGAGTTTTTAACTAAATTTTTTTGTGCATGCCAACAAAA
ATACAAGGATAAAGTCTACCAAGTTTGGGGCTAAAACTCCTTCCAAAAAATTTTAAAAAATCCCG
AACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
TGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATA
TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGT
CATCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTGTCTTAGGCATACGGAGTTCATTCCTAG
TCTAAGATCGGACCAGACCAAGGGTTATGACAACAGGATCAACAGCAGGCAGAGGTGGACCCGAC
TGATCCCCAACCTGCGCTTCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGT
TGACTTAGGCATAAGGAGTTCATTCCCAATCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCG
GACTGGACCGAGCATTGCGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTT
CATCGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGTGGC
Found at i:17627290 original size:26 final size:26
Alignment explanation
Indices: 17627260--17627312 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17627250 GTTGACTTAG
*
17627260 GCATAAGGAGTTCATTCCCAATCTAA
1 GCATAAGAAGTTCATTCCCAATCTAA
* *
17627286 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATAAGAAGTTCATTCCCAATCTAA
17627312 G
1 G
17627313 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATAAGAAGTTCATTCCCAATCTAA
Found at i:17630177 original size:26 final size:26
Alignment explanation
Indices: 17630138--17630197 Score: 79
Period size: 26 Copynumber: 2.4 Consensus size: 26
17630128 GTTGACTTAG
*
17630138 GCATACGGACTTCATTCCCATTCTAA
1 GCATACGGACTTCATTCCCAGTCTAA
* *
17630164 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGACTTCATTCCCAGTCTAA
17630190 G-AT-CGGAC
1 GCATACGGAC
17630198 CGGATGGAAG
Statistics
Matches: 29, Mismatches: 5, Indels: 2
0.81 0.14 0.06
Matches are distributed among these distances:
24 3 0.10
25 2 0.07
26 24 0.83
ACGTcount: A:0.27, C:0.27, G:0.18, T:0.28
Consensus pattern (26 bp):
GCATACGGACTTCATTCCCAGTCTAA
Found at i:17631495 original size:898 final size:890
Alignment explanation
Indices: 17629347--17632009 Score: 3625
Period size: 904 Copynumber: 3.0 Consensus size: 890
17629337 GCTGGAGCCG
* * * * *
17629347 CATTTTTTTTCACCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGGCAGCATTGGGG
1 CATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCTGCGGCATT-GGG
*
17629412 TTCCGACGATCGGGGGGCCAGGGGGGTGTGCGCACATCATGTGCGATGGGTGCTGGTACTTGGCC
65 TTCCGACGATCGGGGGGCC--GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCC
*
17629477 CTTATATTGGCCCCCTATCCCTCATCACACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAG
128 CTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAG
* *
17629542 ATTCTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATGGT
193 ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATGGT
* *
17629607 CACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGCGCTTGCCAACAAAAATACAAG
258 CACAAAATCTTGTACACTTCGAGTTTTCAGCTG-AATTTTTTGTGCTTGCCAACAAAAATACAAG
* *
17629672 GATCACGTATACCATGTTTGGGGCCAAAAATCCTTCCGAAAAAATTGTAAAAAATCTCGAACCGT
322 GATCACGTATACCATGTTTGGGGCCAAAACTCCTT-CGAAAAAATT-TAAAAAATCCCGAACCGT
*
17629737 AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
385 AAAAAGTTTCAAAAGTCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
* *
17629802 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATAAGAAGA
450 CTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGA
* * * * * *
17629867 TGTGCCTAACCCCACCTACCACCTTATGGATCCATGGCTTGCGCATCCTGTCTCTCTGGTCGGCA
515 TGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCG
*
17629932 TAGTGCCCGCCCACCCATCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCC
580 TAGT----GCCCACCC--CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* * *
17629997 AAGTCTAAGATTGGACCAGACTGAGGGTTGCAGCAGCTGAATCGACAGCACGCA-ATGGGGGACC
639 CAGTCTAAGATTGGACCAGACTGAGGGTTGCAGCAGCAGGATCGACAGCACGCAGA-GGGGGACC
* * * *
17630061 CGACCGATACCC-AGCTTACGCATCCCACCCCTCTGGCCGACTGAGCACCCGCACGCTCATTTTG
703 CGACCGAT-CCCTGGCTTGCGCATCCCACCCCTCTGGCCGACTGAG-ACCCGCACGCTCGTTTCG
* * * *
17630125 TGGGTTGACTTAGGCATACGGACTTCATTCCCATTCTAAGCATATGGAGTTCATTCCCAGTCTAA
766 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAA
* ** * * * **
17630190 GATCGGACCGGATGGAAGGTTGCAGCAGCACTTGCTAGGCTCGGGCATGTGCTGGTGCGG
831 GATCAGACCGGATCCAAGGTTGCAGCAGCACATGCTAGGCTCGAGCATGTGCTAGTGCCA
* * * * * * *
17630250 TATTTTTCTTCGCCTGGGCACCGTCATCGGAGCATCATCGGAGAACCTGA-CTGGCGACATTGGG
1 CATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCT-GCGGCATTGGG
* * * **
17630314 CTTTCGACGATCCGGGGGGTCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTCATACTTGG
65 -TTCCGACGAT-CGGGGGG-C-CGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
*
17630379 CCCTTATATTGGCCCCCTATCCATCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
126 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
* *
17630444 AGATTTTGCAGGTTTGCTACCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATG
191 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATG
*
17630509 GTCACAAAATCTTGTACAGTTCGAG-TTTCTAGCTGAATTTTTTAGTGCTTGCCAACAAAAATAC
256 GTCACAAAATCTTGTACACTTCGAGTTTTC-AGCTGAATTTTTT-GTGCTTGCCAACAAAAATAC
* * * *
17630573 AAGGATCACGTCTACCAAGTTTGGGGCCAAAGCTCCTTCTGAAAAAATTTAAAAAAATCCCAAAC
319 AAGGATCACGTATACCATGTTTGGGGCCAAAACTCCTTC-GAAAAAATTT-AAAAAATCCCGAAC
* *
17630638 CGTAAAAAGTTTCAAAAGTCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGA
382 CGTAAAAAGTTTCAAAAGTCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
* *
17630703 AGGCTTAAGGGACCATTGTATGAATTTATAAGCCATAAAAATGGCATTCGCATGCAGAAATATGA
447 AGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
*
17630768 AGATGTGCCTAAACCCACGTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCG
512 AGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCG
* *
17630833 GCGTAGTGCCCACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCATAGGGATACGGAGTTCATTCCC
577 GCGTAGTGCCCA-CC-CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* ** ** *
17630898 AGTCTAAGATTTGACTGGA-TCGAGGGTTGTGGCAGCAGGATC-AGCAGCATGCAGAGGGGGACC
640 AGTCTAAGATTGGACCAGACT-GAGGGTTGCAGCAGCAGGATCGA-CAGCACGCAGAGGGGGACC
* * * *
17630961 CGACCGATCCCTGGCTTGCGCATCACGCCCCTTTAGCCGACTGAGAGCCCGCACGCTCGTTTCGT
703 CGACCGATCCCTGGCTTGCGCATCCCACCCCTCTGGCCGACTGAGA-CCCGCACGCTCGTTTCGT
* * * *
17631026 GTGTTGACTTAGGCATACGGAGTTCATTTCTAGTCTAAGCATACGGAGTTCATTCCCAGTATCAG
767 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAG
* *
17631091 ATCAGACCGGA-CCAAGGGTTGCGGCATCACATGCT-GTGCTCGAGCATGTGCTAGTGCCA
832 ATCAGACCGGATCCAA-GGTTGCAGCAGCACATGCTAG-GCTCGAGCATGTGCTAGTGCCA
* *
17631150 CATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACATGACCTGCGGCATTGTGG
1 CATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCTGCGGCATTG-GG
* **
17631215 TTCCGACGATCAGGGGGGCCGGGGGTGTGCGGACATGATGCACGATGGGTGCTGGTACTTGGCCC
65 TTCCGACGATC-GGGGGGCCGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
17631280 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
129 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGA
* *
17631345 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATCTGAAATGGGGACACTTTTTTCAAATGGTC
194 TTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATGGTC
* * **
17631410 ACAAAATCTTATACACTTCGAGTTTTCAGCTGAAGTTTTTTGTGCATGCCAACAAAAATGGAAGG
259 ACAAAATCTTGTACACTTCGAGTTTTCAGCTGAA-TTTTTTGTGCTTGCCAACAAAAATACAAGG
* * * * * *
17631475 ATCATGTGTACTATGTTTGGGTCCAAAACTCCTTCCAAAAAATTTTTAAAAAATCCTGAACCGTA
323 ATCACGTATACCATGTTTGGGGCCAAAACTCCTTCGAAAAAA--TTTAAAAAATCCCGAACCGTA
* *
17631540 AAAAGTTTCAAAAAG-CATGAAAAATAAAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
386 AAAAGTTTC-AAAAGTCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
**
17631604 CTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGA
450 CTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGA
* * *
17631669 TGTGCCTAAACCCACCTACCACGCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTG
515 TGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCG
* * * *
17631734 TAGTGCCCA------CACGCTTGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAATCT
580 TAGTGCCCACCCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * ** *
17631793 AAGATCGGACCAGACTGAGGGTTGCAGCAGCAGGATCGACAGCACACAGAGGAGGG-CCTAACCA
645 AAGATTGGACCAGACTGAGGGTTGCAGCAGCAGGATCGACAGCACGCAGAGG-GGGACCCGACCG
* * * *
17631857 AT-CCTCGGCTTGCGCATCCCTCCCCTCTGGCCGGCTGAGCTCCCGCACGCTCGTTTCATGGGTT
709 ATCCCT-GGCTTGCGCATCCCACCCCTCTGGCCGACTGAG-ACCCGCACGCTCGTTTCGTGGGTT
* * * ** * * * * *
17631921 GACTTAGGCGTACGGAGTTCATTCCCAGTATCAGCATGTGGAGTTGATTCCCGGTCTATGATCAA
772 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCAG
* *
17631986 ACCAGA-CCGAAGGTTGCAGTAGCA
837 ACCGGATCC-AAGGTTGCAGCAGCA
17632010 GGATTAGCAG
Statistics
Matches: 1554, Mismatches: 174, Indels: 77
0.86 0.10 0.04
Matches are distributed among these distances:
889 3 0.00
890 209 0.13
891 7 0.00
897 6 0.00
898 442 0.28
899 29 0.02
900 315 0.20
901 7 0.00
902 5 0.00
903 69 0.04
904 461 0.30
905 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (890 bp):
CATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCTGCGGCATTGGGT
TCCGACGATCGGGGGGCCGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATGGTCAC
AAAATCTTGTACACTTCGAGTTTTCAGCTGAATTTTTTGTGCTTGCCAACAAAAATACAAGGATC
ACGTATACCATGTTTGGGGCCAAAACTCCTTCGAAAAAATTTAAAAAATCCCGAACCGTAAAAAG
TTTCAAAAGTCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
GGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
TAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
CCACCCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATT
GGACCAGACTGAGGGTTGCAGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCTG
GCTTGCGCATCCCACCCCTCTGGCCGACTGAGACCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
ATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCAGACCGGATCC
AAGGTTGCAGCAGCACATGCTAGGCTCGAGCATGTGCTAGTGCCA
Found at i:17632113 original size:185 final size:184
Alignment explanation
Indices: 17631769--17632186 Score: 509
Period size: 185 Copynumber: 2.3 Consensus size: 184
17631759 GTTGGCTTAG
* ** * *
17631769 GCATACGGAGTTCATTCCCAATCTAAGATCGGACCAGACTGAGGGTTGCAGCAGCAGGATCGACA
1 GCATACGGAGTTCATT-CCAGTCTAAGATCAAACCAGACCGAGGGTTGCAGCAGCAGGATAGACA
* * * * *
17631834 GCACACAGAGGAGGGCCTAACCAATCCTCGGCTTGCGCATCCCTCCCCTCTGGCCGGCTGAGCTC
65 GCACACAGAGGAGGGACTAACCAATCCTCGGCTTGCGCATCCCTCCCCACTGGCCGACTAAGCGC
* * * * *
17631899 CCGCACGCTCGTTTCATGGGTTGACTTAGGCGTACGGAGTTCATTCCCAGTATCA
130 CCGCACGCTCATTTCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAATATAA
** * * * * *
17631954 GCATGTGGAGTTGATTCCCGGTCTATGATCAAACCAGACCGAAGGTTGCAGTAGCAGGATTAG-C
1 GCATACGGAGTTCATT-CCAGTCTAAGATCAAACCAGACCGAGGGTTGCAGCAGCAGGA-TAGAC
* * * *
17632018 AGCACACAGTGG-GGGACTCAGCCAATCTTCGGCTTGTGCAT-CCTGCCCCACTGGCCGACTAAG
64 AGCACACAGAGGAGGGACT-AACCAATCCTCGGCTTGCGCATCCCT-CCCCACTGGCCGACTAAG
* *
17632081 CGCCCGCATGCTCATTTCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAATCTAA
127 CGCCCGCACGCTCATTTCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAATATAA
*
17632139 GCATACGGAGTTCATTCCAGTCTAAGATCAGACCAGACCGAGGGTTGC
1 GCATACGGAGTTCATTCCAGTCTAAGATCAAACCAGACCGAGGGTTGC
17632187 GACAGCACAT
Statistics
Matches: 195, Mismatches: 35, Indels: 7
0.82 0.15 0.03
Matches are distributed among these distances:
184 36 0.18
185 157 0.81
186 2 0.01
ACGTcount: A:0.23, C:0.28, G:0.26, T:0.22
Consensus pattern (184 bp):
GCATACGGAGTTCATTCCAGTCTAAGATCAAACCAGACCGAGGGTTGCAGCAGCAGGATAGACAG
CACACAGAGGAGGGACTAACCAATCCTCGGCTTGCGCATCCCTCCCCACTGGCCGACTAAGCGCC
CGCACGCTCATTTCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAATATAA
Found at i:17632143 original size:26 final size:25
Alignment explanation
Indices: 17632113--17632164 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
17632103 GTTAACTTAG
17632113 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATT-CCAATCTAA
*
17632139 GCATACGGAGTTCATTCCAGTCTAA
1 GCATACGGAGTTCATTCCAATCTAA
17632164 G
1 G
17632165 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 9 0.36
26 16 0.64
ACGTcount: A:0.29, C:0.25, G:0.19, T:0.27
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCAATCTAA
Found at i:17633051 original size:26 final size:26
Alignment explanation
Indices: 17633015--17633067 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17633005 GTTGACTTAG
*
17633015 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17633041 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17633067 G
1 G
17633068 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17633945 original size:26 final size:26
Alignment explanation
Indices: 17633909--17633959 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
17633899 TTGACTTAGG
17633909 CATACGAAGTTAATTCCCAGTCTAAC
1 CATACGAAGTTAATTCCCAGTCTAAC
* *
17633935 CATACGGAGTTCATTCCCAGTCTAA
1 CATACGAAGTTAATTCCCAGTCTAA
17633960 GATCGGACCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.27, G:0.14, T:0.27
Consensus pattern (26 bp):
CATACGAAGTTAATTCCCAGTCTAAC
Found at i:17634353 original size:895 final size:894
Alignment explanation
Indices: 17631960--17634936 Score: 3983
Period size: 895 Copynumber: 3.3 Consensus size: 894
17631950 ATCAGCATGT
* * * * ** * ** *
17631960 GGAGTTGATTCCCGGTCTATGATCAAACCAGACCGAAGGTTGCAGTAGCAGGATTAGCAGCACAC
1 GGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCAGTAGCAGGATCGGCAGCACGC
* * * * * * * *
17632025 AGTGGGGGACTC-AGCCAATCTTCGGCTTGTGCATCCTGCCCCACTGGCCGACTAAGCGCCCGCA
66 AGAGGGGGACCCGA-CCGATCCTCGACTTGCGCATCCCGCCCCTCTGGCCGACTAAGCGCCCGCA
* * *
17632089 TGCTCATTTCATGGGTTAACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCAT
130 CGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCAT
* * *
17632154 T-CCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGTTG
195 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTG
** * * *
17632218 GTGCCGCATTTTTCTTCACCGGGGTGCCATTGTCGCAGCATCACCGGAGAACCTAACCGATGGCA
260 GTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTAACCGACGGCA
* * * *
17632283 TTGGGGTGCCGGCGATCGGGGGGGCCGGGGGACGGTGTGCGCACATCATGTGCAATGGGTGCTGG
325 TTGAGGTTCCGGCGATC-GGGGGG-CGGGGG--GGTGTGCGCACATGATGTGCGATGGGTGCTGG
17632348 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA-GACCCCCTTAAAG
386 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACG-CCCCCTTAAAG
* **
17632412 AGCATTTGAGATTTTACATGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTT
450 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTT
17632477 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACA
515 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACA
* *
17632542 AAAATACAAGGATCACGTCTACC-AGGTTGGGGCCAAAAATCCTTCTGAAAAAATTTTAAAAAAT
580 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAA-
* ** * * * * *
17632606 TACAAAT-CGCAGAAAGTTTCAAAAATCATGAAAAATAAAAAATAAGTCGTCTTGCCATGAAACT
644 TCCCGATCCGTAAAAAGTTT-TAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACT
* * *
17632670 TCACGTGAAGGCTTAAGGG-CCATTGTATGAACTTACAAGGCATAAAAATGGCATTGGCACGTAG
708 TAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAG
*
17632734 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTATCTC
773 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTC
* * *
17632799 TCTGGCTGACGTAGTGCCCGCCCACCTGTCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATAC
838 TCTGGCCGGCGTAGTGCCCG----CC---CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * * *** *
17632863 AGAGTTCATTCCCAGTCT-AGATCAGATTGGACTGAGGGTTATGGTAGCAGGATCGGCAGCACGT
1 GGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCAGTAGCAGGATCGGCAGCACGC
* * * *
17632927 AGAGGGGGACCCGATCGATTCCT-GACTTGCGCATCCTGCCCCTCTGGCCGGC-AGAGAGCCCGC
66 AGAGGGGGACCCGACCGA-TCCTCGACTTGCGCATCCCGCCCCTCTGGCCGACTA-AGCGCCCGC
* * *
17632990 ACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
129 ACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
* * * * *
17633055 TTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGTGGTAGCACATGCTAGGCTCGGGCTTGTGCT
194 TTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCT
** *
17633120 GGTGCCGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGCATCACCGGAGAACCTAACCGACGGC
259 GGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTAACCGACGGC
** ** * *
17633185 ATT-AGGGTTCCGGTAATCGGGGGGCCTGGGGGTGTGCGTACATGATGTGCGATGGTTGCTGGTA
324 ATTGA-GGTTCCGGCGATCGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
** *
17633249 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACATCGCCTTAAAGAGC
388 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACGCCCCCTTAAAGAGC
* * *
17633314 ATTTGAGGTTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATCTAAAACGGGGACACTTTTTTC
453 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTC
* * *
17633379 AAATGGTCAGAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAA
518 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAA
*
17633444 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
583 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCC
* *
17633509 GATCCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATTAAACTTAAC
648 GATCCGTAAAAAGTTTT-AAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTAAC
** *
17633574 GTGAAGGCCCAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCATGTAGAAAT
712 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAAT
* * *
17633638 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTT
777 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTG
*
17633703 GCCGGCGCAGTGCCCG-CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
842 GCCGGCGTAGTGCCCGCCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
** ** * * *
17633755 GGAGTTCATTCCCAGTCTAAGATTGGACCCGACCGAGGGTTGCAGCAGCAGTATCGGTAGCACGC
1 GGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCAGTAGCAGGATCGGCAGCACGC
* * * * * * *
17633820 AGTGGGGGACCCGGCCGATCCTCGCCTTGCGCATCCCGCCCTTCTGGCCAACTGAGTGCCCGCAC
66 AGAGGGGGACCCGACCGATCCTCGACTTGCGCATCCCGCCCCTCTGGCCGACTAAGCGCCCGCAC
* * *
17633885 GCTCATTTCATGGGTTGACTTAGGCATACGAAGTTAATTCCCAGTCTAACCATACGGAGTTCATT
131 GCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* *
17633950 CCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTTGGGCATGTGCTGG
196 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGG
* ** * *
17634015 TG-CGACATTTTTGTTCACCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGACA
261 TGCCG-CATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTAACCGACGGCA
*
17634079 TTGAGGTTCCGACGATCAGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
325 TTGAGGTTCCGGCGATC-GGGGGG-CGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
* *
17634144 CTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCAAGAACTCACGCCCCCTTAAAGAGC
388 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACGCCCCCTTAAAGAGC
* *
17634209 ATTTGAGATTTTATAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTAAAATGGGGACACTTTTTTC
453 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTC
* * **
17634274 AAATGGTCACAAAATCTTATACACTTCAAGTTTTTGGCTGAATTTTTTTGTGCATGCCAGTAAAA
518 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAA
* * * *
17634339 ATGCAAGGATCACGTCTAGCAAGTTTGGGGCAAAAAATCCTTCCAAAAAAATTTTAAAAAATCCC
583 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCC
*
17634404 GAACCGTAAAAAGTTTCTAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAAC-TACA
648 GATCCGTAAAAAGTTT-TAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTA-A
*
17634468 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATAGCATTGGCACGTAGAAA
711 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAA
17634533 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTG-CATCTC
776 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTC-TCTC
* * * *
17634597 TGGCCGGCGTAGTGCCCGCCTTCCCTCCCGCCCGCTCTTTTCGCCGATTGGCTTAGGGATAC
840 TGGCCGGCGTAGTGCCCG------C-CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
* * *
17634659 GGAGTTCATTCCAAGTCTAAGATCCGACTGGACCGA-----GC-GTTGC--GA----CAGCACGC
1 GGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCAGTAGCAGGATCGGCAGCACGC
* * * * * *
17634712 AGAGGGGGACCCGACCGATCCCCGTCTTGCGCATCCCACCCCTCTGGCCGGCTAAGCGTCTGCAC
66 AGAGGGGGACCCGACCGATCCTCGACTTGCGCATCCCGCCCCTCTGGCCGACTAAGCGCCCGCAC
* * **
17634777 GCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAAGCATGTGGAGTTCATT
131 GCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* * * * * *
17634842 CCCAGTCTAAGATCAGACCGGACAGAGGGTTACGGTAGCACATGCTGGGCTCGGGCATGTACTGG
196 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGG
* ** *
17634907 TGCCACATTTTTCTTCGTCGGGGCAACATC
261 TGCCGCATTTTTCTTCACCGGGGCACCATC
17634937 ACCGAAACAT
Statistics
Matches: 1818, Mismatches: 226, Indels: 71
0.86 0.11 0.03
Matches are distributed among these distances:
892 255 0.14
893 267 0.15
894 9 0.00
895 371 0.20
896 99 0.05
898 3 0.00
899 238 0.13
900 199 0.11
901 27 0.01
902 144 0.08
903 143 0.08
904 63 0.03
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (894 bp):
GGAGTTCATTCCCAGTCTAAGATCAGACTGGACCGAGGGTTGCAGTAGCAGGATCGGCAGCACGC
AGAGGGGGACCCGACCGATCCTCGACTTGCGCATCCCGCCCCTCTGGCCGACTAAGCGCCCGCAC
GCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGG
TGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTAACCGACGGCAT
TGAGGTTCCGGCGATCGGGGGGCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT
GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACGCCCCCTTAAAGAGCATT
TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAA
TGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAAATA
CAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAT
CCGTAAAAAGTTTTAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTAACGTGA
AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGA
AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCTCTGGCCG
GCGTAGTGCCCGCCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAC
Found at i:17636638 original size:60 final size:60
Alignment explanation
Indices: 17636545--17636663 Score: 238
Period size: 60 Copynumber: 2.0 Consensus size: 60
17636535 TGATGTGCGA
17636545 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTT
1 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTT
17636605 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
1 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
17636664 CACACCCCTT
Statistics
Matches: 59, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
60 59 1.00
ACGTcount: A:0.18, C:0.32, G:0.20, T:0.29
Consensus pattern (60 bp):
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTT
Found at i:17639853 original size:26 final size:26
Alignment explanation
Indices: 17639823--17639875 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17639813 GTTGACTTAG
*
17639823 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCAAGTCTAA
17639849 GCATACGGAGTTCATTCCAAGTCTAA
1 GCATACGGAGTTCATTCCAAGTCTAA
17639875 G
1 G
17639876 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCAAGTCTAA
Found at i:17641026 original size:901 final size:898
Alignment explanation
Indices: 17636878--17641493 Score: 6178
Period size: 898 Copynumber: 5.1 Consensus size: 898
17636868 AGTTTTGAAA
* * * * * * * * *
17636878 ATCGATCCACGACTTACGCATCTCATCTCTCTAGTCGACGTAATGCCCGTCCGC-CCGCCCGCCC
1 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CC-CACCGCCCGCTC
** * * * *
17636942 GCTCGTTTCGTCGAATGGCTTAGGCATACAGAGTTTATTCCAAGTCTAAGATCAGACCAAACTGA
64 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGGCCAAACTGA
* * * * * ** *
17637007 AGGTTGTAGTAGCAAGATCGACAGCACGTAGAGGGGGACCCGACCGATCCCCGGCTTATGCATCT
129 GGGTTGCAGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCC
* * * * *
17637072 CGCCCCTCTGGCCGGTTGAGCGCCCGCACGCTCGTTTCAAGGGTTGATTTAGGCATACAGAGTTC
194 CGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTC
* * * * * * *
17637137 ATTCCTAGTTTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCAAAGATTGCGAC
259 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGC
* * ** * *
17637202 AGCACATGCTGGGCTCGGGCATGTGCTGGTGGCACATTTTTCTTCCCCAGGGCACCATCGTCGGA
324 AGCACATGCTGGGCTC-GGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* * * *
17637267 GCATCACCGGAGAACCTGATCGACGGCATTGGGGTTCTGGCGATCGGGGGGGCCGGGGGGTGTGC
388 GCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-CGGGGGGTGTGC
* *
17637332 ACACATGATGTGCGGTGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
452 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
17637397 TCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
517 TCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* *
17637462 AGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTTTAGC
582 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* *
17637527 TGAATGTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCATGTTTGGGGCCAAAACT
647 TGAAT-TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT
** * * * * *
17637592 CCTTCTAAAAAAATTTTAGAAAATCC-CAAACGGCAAAAAGTTTCAAAAATCGTAAAAAATAGAA
711 -CTTCCGAAAAAATTTTA-AAAATCCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAA
** * *
17637656 AACGAGTCAACTTGCCATGAAACTTCACGTGAAGGTTTAACGGACCATTGTATGAATTTACAAGC
774 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
*
17637721 CATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
839 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * * *
17637781 ATCGATTCACGGCTTGCGCATCCCGTCTCTCTCGCAGACATAGTGCCTG--C-CCGCCCG-TCTG
1 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCGCCCGCTC-G
* * * * *
17637842 CTCGTTTCGTAGGTTGGCTTAGGAATACGGAGTTCATTCCCTGTCTAAGATCAGACCAGA-TCGA
65 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGGCCAAACT-GA
** * * * * * *
17637906 GGGTTGCACCAGCAGGATCAATAACACGCAGAGGGGGACCCGATCGATCCTCGGGTTGCG-ATCG
129 GGGTTGCAGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCC
* * * *
17637970 CGCCCCTCTGGCCGACTGAGCGCCCGCATGCTCATTTCATGCGTTGACTTAGGCATAAGGAGTTC
194 CGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTC
* * * * * *
17638035 ATTCCCAATCTAAGCATACAGAGTTCATTCACAGTTTAAGATCAGATTGGACCGAGGGTTGTGGC
259 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGC
* * * *
17638100 AGCACATGCTGAGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCTCCGTA
324 AGCACATGCTGGGCTC-GGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGA
* *
17638165 GCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGATGATCGGGGGGGCCGGGGGGTGTGC
388 GCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG-CGGGGGGTGTGC
* * * *
17638230 ACACATGATGAGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCACCTATCCCTCATCAAACC
452 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
* * * **
17638295 TGGAA-AACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCCA-TTGATATT
517 T-CAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG-CCAGTAGCCATT
*
17638358 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTATACACTTCGAGTTTTTA
580 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * *
17638423 GCTGAATTTTCTTGTGCATGCCAA-AAAAACTAGAAGGATCATGTCTTCCAAGTGTGGGGCCAAA
645 GCTGAATTTT-TTGTGCATGCCAACAAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* *
17638487 ACTCCTTCCGAAAAAATTTTAAAAAAT-CTCGAACCGCAAAAAGTTTCAAAAATCTTGAAAAATA
708 ACT-CTTCCGAAAAAATTTT-AAAAATCCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATA
* *
17638551 GAAAACGAGTTGTCTTGCAATGAAACTTCACGTGAAGGCTTAA-GGACCATTGTATGAATTTACA
771 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* ** *
17638615 AGCCAT-AAAATGGTATTGGCATGCAGAAATATGAAGATGTGTGTAAACCCACCTACCACCCG
836 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * *
17638677 ATTGATCCATGGCTTGCGTATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGC-CCGCCCGCCC
1 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCC--CACCGCCCGCTC
* * *
17638741 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC-GGATCGAACCG
64 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGG-CCAAACTG
* ** * *
17638805 AGGGTTGC-GATAGCAGGATCGGCAGCATACAGAGGGGGACCCGGCCGATCCTCGGCTTGCGTAT
128 AGGGTTGCAG-TAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCAT
* * * * * **
17638869 CCCGCCCATCTAGCCGGTTGAGCGTCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGT
192 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGT
* * * ** * *
17638934 TCATTCCCAGTCGAAGCGTACGGAGTTCATTCCTAGTCTAAGATTGGATCAGACCGAGGGTTACG
257 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCG
** * * *
17638999 ATAGCACATGCTGGGCTCGAGCATGTGGTGGTGCCGTATTTTTCTTCGTTGGGGCACCATCGCCG
322 GCAGCACATGCTGGGCTCG-GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * * *
17639064 GAGCATCGCTGCAGAACCTGACCGATGGCATTGGGGTTCCGGCGATCGGTGGGGCTGGGAGGGTG
386 GAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGC-GGG-GGGTG
17639129 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
449 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
*
17639194 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
514 ACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
17639259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAATTTTT
579 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
*
17639324 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACCAAA
644 AGCTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
*
17639389 ACTCTTTCCGAAAAAATTTTTAAAAATCC-CAAACCGTAAAAAGTTTCAAAAATCATGAAAAATA
708 ACTC-TTCCGAAAAAA-TTTTAAAAATCCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATA
* * * **
17639453 AAAAATGAGTCGTTTTGCCATGAAACTTCACGTGAAGGCTTAAGTTACCATTGTATGAATTTACA
771 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
* *
17639518 AGCCATAAAAATGGCATTGGCATGGAGAAATATGAAGATGTGCCTAAACTCACCTACCACCCT
836 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * **
17639581 ATCGATCCACGGCTTGTGCATCCCATCTCTCTAGCCTACGTAGTGCCCGCCCACCTGCCCGCTCG
1 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACC-GCCCGCTCG
* * * * * * * ** **
17639646 --C--TTCGTCGGTGGGCTAAGGCTTATGGAGTTCATTCCCAATCTAAGAT-TGGATCGGACCAA
65 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGG-CCAAACTGA
* * * * * *
17639706 GGGTTACAGTAGCAGGATC-AGTAGCACGTAGAGTGGGACCC-AGTCGATCCTCGACTTGCGCAT
129 GGGTTGCAGTAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGA-CCGATCCTCGGCTTGCGCAT
* * *
17639769 CCCACCCCTCTGGCTGGCTGAGCGCCCGCATGCTCATTTCATGGGTTGACTTAGGCATACGGAGT
192 CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGT
* * *
17639834 TCATTCCTAGTCTAAGCATACGGAGTTCATTCCAAGTCTAAGATCAGACCGGACCGAGGGTTGCG
257 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCG
* *
17639899 GCAGCACATGCTGGGCTCGAGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGCACCATCGTCG
322 GCAGCACATGCTGGGCTCG-GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCG
* * * *** * *
17639964 GAGCATCGCCAGAGAACCTAACCGCCCATATTGAGGTTCCGACGATCGGGGGGCCGGGGGGTGTG
386 GAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTG
*
17640029 CGGACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
451 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * * *
17640094 CTCGAGAACCCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGGC-GCCAGTAGCCGTT
516 CTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT-GCTGCCAGTAGCCATT
* * *
17640158 AAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGTGTTTTTA
580 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* *
17640223 GCTGAATTTTTTATGCATGCCAACAAAAGTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
645 GCTGAATTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* *
17640288 TCTTCCGAAAAAATTTTAAAAAACCTCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAA
710 TCTTCCGAAAAAATTTTAAAAATCCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA
* * *
17640353 ATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTGCAAGCC
775 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* * *
17640418 ATAAAAATTGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
840 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * *
17640477 ATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCACCCATCCACCCGCTCG
1 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCA-CCGCCCGCTCG
* * *
17640542 CTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCAATCCCAGTCTAAGATCAGGCCAAACTGAG
65 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGGCCAAACTGAG
*
17640607 GGTTGCAGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC
130 GGTTGCAGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCCC
* *
17640672 TACCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTC
195 -GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTC
* ** ** * *
17640737 ATTCCCAGTCTAAGCATACAGAGTTTGTTCGTAGTCTAAGATCTA-ATCGGATCGAGGGTTGTGG
259 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC-AGATCGGACCGAGGGTTGCGG
* * * * * *
17640801 CAGCACATGTTGGGCTCAGGCATGTGCTGCTGTCGCATTTCTCTTCGTCGGGGTACCATCACCGG
323 CAGCACATGCTGGGCTC-GGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGG
** * *
17640866 AGCATCGCCGGAGAACCTGATTGGCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGCGGTGTC
387 AGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGG-GGTGTG
* * *
17640931 CGCGCATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATTCCTCATCAAAC
451 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
*
17640996 CTCAAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTACCCATTA
516 CTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
17641060 AAGTGTCTGAAATGGGGACACTTTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAG
581 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *
17641125 TTGAATTTTTTTGTGGATGCCAACAAAAATAGAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
646 CTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * *
17641190 ACCTTCC-AAAAGAATTTTAAGAAATCCT-GAACCGTGAAAAGTTTTAAAAATCATGAAAAATAG
710 -TCTTCCGAAAA-AATTTTAA-AAATCCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAG
* *
17641253 AAAAGGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAA
772 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
*
17641318 GCCATAAAAATGGCTTTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
837 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * *
17641380 ATCGATCCACGGCTTGCGCGTCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCCGTCCGGTTG
1 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCA-CCGCCCGCTCG
* * * *
17641445 CTCATTTCGTCGGTTGGCTTAGGCATATGCAGTTCATTCCTAGTCTAAG
65 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
17641494 CATATGGAGT
Statistics
Matches: 3251, Mismatches: 408, Indels: 108
0.86 0.11 0.03
Matches are distributed among these distances:
895 11 0.00
896 307 0.09
897 96 0.03
898 736 0.23
899 120 0.04
900 521 0.16
901 550 0.17
902 461 0.14
903 342 0.11
904 107 0.03
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (898 bp):
ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCGCCCGCTCGC
TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGGCCAAACTGAGG
GTTGCAGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCTCGGCTTGCGCATCCCG
CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCAT
TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAG
CACATGCTGGGCTCGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCA
TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGGGTGTGCGCAC
ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAA
GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTG
TCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTCC
GAAAAAATTTTAAAAATCCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
Found at i:17641519 original size:26 final size:26
Alignment explanation
Indices: 17641467--17641519 Score: 61
Period size: 26 Copynumber: 2.0 Consensus size: 26
17641457 GTTGGCTTAG
* * *
17641467 GCATATGCAGTTCATTCCTAGTCTAA
1 GCATATGCAGTTCATTCCCAATATAA
* *
17641493 GCATATGGAGTTTATTCCCAATATAA
1 GCATATGCAGTTCATTCCCAATATAA
17641519 G
1 G
17641520 ATCGGACCAG
Statistics
Matches: 22, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.19, G:0.17, T:0.34
Consensus pattern (26 bp):
GCATATGCAGTTCATTCCCAATATAA
Found at i:17642126 original size:743 final size:738
Alignment explanation
Indices: 17640694--17642232 Score: 2194
Period size: 743 Copynumber: 2.1 Consensus size: 738
17640684 CGGCTGAGCG
* * *
17640694 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGA
1 CCCGCACGCTCATTTCGTCGGTTGGCTTAGGCATA-TGAGTTCATTCCCAGTCTAAGCATACAGA
* ** * * * * * * *
17640759 GTTTGTTCGTAGTCTAAGATCTAATCGGATCGAGGGTTGTGGCAGCACATGTTGGGCTCAGGCAT
65 GTTTATTCCCAATATAAGATCGAACCAGACCGAGGGTTGTGGCAGCACATGCTGGGCTCAGGCAT
* * * * * * *
17640824 GTGCTGCTGTCGCATTTCTCTTCGTCGGGGTACCATCACCGGAGCATCGCCGGAGAACCTGATTG
130 GTGCTGCTGCCACATTTCTCTTCATCGGGGCACCATCACCGGAGCATCACCGAAGAACCTGATCG
* * * * * **
17640889 GCGGCATTGGGGTTCCGACGATCGGGGGGGCGGGGCGGTGTCCGCGCATGATGTGGGATGGGTGC
195 GAGGCATTAGGGTTCCGACGATCGGGGGGCCAGGGCGGTGTCCGCACATGATGTGCAATGGGTGC
** *
17640954 TGGTACTTGGCCCTTATATTGGCCCCCTATTCCTCATCAAACCTCAAGAACTCACACCCCTTAAA
260 TGGTACTTGGCCCTTATATTCACCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCTTAAA
*
17641019 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTACCCATTAAAGTGTCTGAAATGGGGACACTTT
325 GAGCATTTGAGATTTTACAGGTTTACTGCCAGTACCCATTAAAGTGTCTGAAATGGGGACACTTT
*
17641084 TTGCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAGTTGAATTTTTTTGTGGATGCCAAC
390 TTGCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAGTTGAATTTTTTTGTGCATGCCAAC
* * * *
17641149 AAAAATAGAAGGATCACGTCTACCAAGTTTGGGGCCAAAACACCTTCCAAAAGAATTTTAAGAAA
455 AAAAATACAAGGATCACATCTAACAAGTTTGGGGCCAAAACACCTTCCAAAAGAATTTTAAAAAA
** ** * *
17641214 TCCTGAACCGTGAAAAGTTTTAAAAATCATGAAAAATAGAAAAGGAGTCGTCTTGCCATGAAACT
520 TCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* *
17641279 TCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCTTTGGCATGCAG
585 TCACGTGAACGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
* *
17641344 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCGTCCCGTCTC
650 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTC
*
17641409 TCTGGCCGGCGTAGTGCCCGCCCA
715 TCTGGCCGGCATAGTGCCCGCCCA
*
17641433 CCCGTC-CGGTTGCTCATTTCGTCGGTTGGCTTAGGCATATGCAGTTCATTCCTAGTCTAAGCAT
1 CCCG-CAC----GCTCATTTCGTCGGTTGGCTTAGGCATATG-AGTTCATTCCCAGTCTAAGCAT
** * *
17641497 ATGGAGTTTATTCCCAATATAAGATCGGACCAGACCGAGGGTTGTGGTAGCACATGCTGGGCTC-
60 ACAGAGTTTATTCCCAATATAAGATCGAACCAGACCGAGGGTTGTGGCAGCACATGCTGGGCTCA
* * * *
17641561 GGACATGTGCTGGC-GCCACATTTTTCTTCATTGGGGCACCATCACCGGAGCATCACCGAAGGAT
125 GG-CATGTGCT-GCTGCCACATTTCTCTTCATCGGGGCACCATCACCGGAGCATCACCGAAGAAC
* * **
17641625 CTGATCGGAGGTATTAGGGTTCCGGCGATCGGGGGGCCAGGG-GGTGTGTGCACATGATGTGCAA
188 CTGATCGGAGGCATTAGGGTTCCGACGATCGGGGGGCCAGGGCGGTGTCCGCACATGATGTGCAA
* *
17641689 TGGGTGCTGGTACTTGGGCCTTATATTCACCCCTTATCCCTCATCAAACCTCAAGAACTCACACC
253 TGGGTGCTGGTACTTGGCCCTTATATTCACCCCCTATCCCTCATCAAACCTCAAGAACTCACA-C
* *
17641754 CCCTTAAAGAGCGTTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
317 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTACCCATTAAAGTGTCTGAAATGGG
* *
17641819 GACACTATTTT-CAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTA-TCTGAATTTTTTTGT
382 GACACT-TTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAGT-TGAATTTTTTTGT
* *
17641882 GCATGCCAAC-AAAATACAAGGATCACATCTAACAAGTTTGGGGCCAAAACTCTTTCCGAAAA-A
445 GCATGCCAACAAAAATACAAGGATCACATCTAACAAGTTTGGGGCCAAAACACCTTCC-AAAAGA
* *
17641945 ATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAATATCGTGAAAAATAGAAAACGAGTCGTCTT
509 ATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
*
17642010 GCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
574 GCCATGAAACTTCACGTGAACGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
17642075 TTGGCTTTGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTAC
639 TTGGC-ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTAC
* * *
17642140 GCATCCCGTCTCTTTGGTCGGCATAGTGCCTGCCCA
703 GCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCA
* *
17642176 CCCGCACACTCGTTTCGTCGGTTGGCTTAGGCATATTGAGTTCATTCCCAGTCTAAG
1 CCCGCACGCTCATTTCGTCGGTTGGCTTAGGCATA-TGAGTTCATTCCCAGTCTAAG
17642233 ATCGGACCAG
Statistics
Matches: 707, Mismatches: 78, Indels: 30
0.87 0.10 0.04
Matches are distributed among these distances:
739 49 0.07
740 3 0.00
742 246 0.35
743 403 0.57
744 6 0.01
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.27
Consensus pattern (738 bp):
CCCGCACGCTCATTTCGTCGGTTGGCTTAGGCATATGAGTTCATTCCCAGTCTAAGCATACAGAG
TTTATTCCCAATATAAGATCGAACCAGACCGAGGGTTGTGGCAGCACATGCTGGGCTCAGGCATG
TGCTGCTGCCACATTTCTCTTCATCGGGGCACCATCACCGGAGCATCACCGAAGAACCTGATCGG
AGGCATTAGGGTTCCGACGATCGGGGGGCCAGGGCGGTGTCCGCACATGATGTGCAATGGGTGCT
GGTACTTGGCCCTTATATTCACCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCTTAAAG
AGCATTTGAGATTTTACAGGTTTACTGCCAGTACCCATTAAAGTGTCTGAAATGGGGACACTTTT
TGCAAATGGTCACAAAATCTTGTACACTTCGAGATTTTAGTTGAATTTTTTTGTGCATGCCAACA
AAAATACAAGGATCACATCTAACAAGTTTGGGGCCAAAACACCTTCCAAAAGAATTTTAAAAAAT
CCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
CACGTGAACGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCT
CTGGCCGGCATAGTGCCCGCCCA
Found at i:17642401 original size:26 final size:26
Alignment explanation
Indices: 17642372--17642443 Score: 135
Period size: 26 Copynumber: 2.8 Consensus size: 26
17642362 TAGGCATATG
*
17642372 GAGTTCATTCCCAGTCTAAGCATGCA
1 GAGTTCATTCCCAGTCTAAGCATACA
17642398 GAGTTCATTCCCAGTCTAAGCATACA
1 GAGTTCATTCCCAGTCTAAGCATACA
17642424 GAGTTCATTCCCAGTCTAAG
1 GAGTTCATTCCCAGTCTAAG
17642444 ATCGGATTGG
Statistics
Matches: 45, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 45 1.00
ACGTcount: A:0.28, C:0.26, G:0.18, T:0.28
Consensus pattern (26 bp):
GAGTTCATTCCCAGTCTAAGCATACA
Found at i:17643387 original size:159 final size:159
Alignment explanation
Indices: 17643109--17643469 Score: 474
Period size: 159 Copynumber: 2.3 Consensus size: 159
17643099 CACCCGTTCA
* * * * **
17643109 TTTCGTCGGTTGGCTTAGGCATACGAAGTTGATTCCCAGTCTAAGATCTGACCGGATTGAGGGTT
1 TTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTT
* * ** ** * *
17643174 GTGGCAGTAGGATCGATAGTGCACAGAGGGGGACCCGGCCGATCCCTGGGTTGCGCATCTCG-CC
66 GCGGCAGTAGGATCGACAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGTCC
*
17643238 CTTCAGG-CTAGTTGAGCGCCCGCACGCTCG
131 C-TCAGGTC-AATTGAGCGCCCGCACGCTCG
* *
17643268 TTTCGTGGGTTGACTTATGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTT
1 TTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTT
* **
17643333 GCGGTAGTAGGATCGACAGCACACAGAGTTGGACCCGGCCGATCCCCAGCTTGCGCATCCCGTCC
66 GCGGCAGTAGGATCGACAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGTCC
* *
17643398 CTCTGGTCAATTGAGCGCCCGGACGCTCG
131 CTCAGGTCAATTGAGCGCCCGCACGCTCG
* *
17643427 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTA
1 TTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTA
17643470 TGCATACGGA
Statistics
Matches: 175, Mismatches: 25, Indels: 4
0.86 0.12 0.02
Matches are distributed among these distances:
159 171 0.98
160 4 0.02
ACGTcount: A:0.19, C:0.26, G:0.30, T:0.25
Consensus pattern (159 bp):
TTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTT
GCGGCAGTAGGATCGACAGCACACAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGTCC
CTCAGGTCAATTGAGCGCCCGCACGCTCG
Found at i:17643481 original size:26 final size:26
Alignment explanation
Indices: 17643445--17643523 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
17643435 GTTGACTTAG
*
17643445 GCATACGGAGTTCATTCCTAGTCTAT
1 GCATACGGAGTTCATTCCCAGTCTAT
*
17643471 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAT
17643497 GCATACGGAGTTCATTCCCAGTCTAT
1 GCATACGGAGTTCATTCCCAGTCTAT
17643523 G
1 G
17643524 ATCGGACCAG
Statistics
Matches: 50, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.24, C:0.25, G:0.20, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAT
Found at i:17644688 original size:26 final size:26
Alignment explanation
Indices: 17644658--17644710 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17644648 GTTGACTTAG
17644658 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17644684 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17644710 G
1 G
17644711 ATCGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17648256 original size:22 final size:22
Alignment explanation
Indices: 17648228--17648272 Score: 90
Period size: 22 Copynumber: 2.0 Consensus size: 22
17648218 CCAGTATAAG
17648228 ATCAGACTGGTCCGAGGGTTGC
1 ATCAGACTGGTCCGAGGGTTGC
17648250 ATCAGACTGGTCCGAGGGTTGC
1 ATCAGACTGGTCCGAGGGTTGC
17648272 A
1 A
17648273 GCAGCACAAG
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
22 23 1.00
ACGTcount: A:0.20, C:0.22, G:0.36, T:0.22
Consensus pattern (22 bp):
ATCAGACTGGTCCGAGGGTTGC
Found at i:17650471 original size:26 final size:26
Alignment explanation
Indices: 17650441--17650493 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17650431 GTTGAGTTAG
17650441 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17650467 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17650493 G
1 G
17650494 ATCGGATCAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17651147 original size:26 final size:26
Alignment explanation
Indices: 17651110--17651162 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
17651100 GTTGACTTAG
* *
17651110 GCATACGGAGTTCTTTCCCGATCTAA
1 GCATACGAAGTTCATTCCCGATCTAA
* *
17651136 GCATACGAAGTTCATTCCTGATGTAA
1 GCATACGAAGTTCATTCCCGATCTAA
17651162 G
1 G
17651163 ATCGGACTGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCGATCTAA
Found at i:17651408 original size:669 final size:671
Alignment explanation
Indices: 17650127--17651471 Score: 1879
Period size: 669 Copynumber: 2.0 Consensus size: 671
17650117 ATTGTATGAA
* *
17650127 TTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCAACCTACCA
17650192 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTCGCCGGCGTAGTTCCGGCCGCCCGCCCGC
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTCGCCGGCGTAGTT-C-GCCGCCCGCCCGC
* * *
17650257 CCGCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCTTTCCCAGTCTAAGATCCGACAGGATC
129 CCGCTCATTTCATCGATTAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGACAGGATC
* * ** * * * *
17650322 GAGGGTTGCGACAGTAGGATCGTTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCGCAT
194 GAGGGTTACGACAGCAGGATCGACAGAACGCAGAGGGGGACCCAACCGATCCCCGGCTTACGCAT
* * * *
17650387 CCCGGCCCTCTGGCCGATTGAATGCCCGCACGCTCATTTCATGGGTTGAGTTAGGCATACGGAGT
259 CCCGCCCCTCTGGCCGACTGAATGCCCGCACACTCATTTCATGGGTTGACTTAGGCATACGGAGT
*
17650452 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATCGGATCACATCGAGGGTTGCG
324 TCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGATCACATCGAGGGTTGCG
** * * *
17650517 GTAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACCG
389 ACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTCTCTTCACCGGGGCACCATCACCG
* * ** * * *
17650582 GAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCTGGTGATCGGGGGGGCGAGGGGGGTG
454 GAGCATCGCCAGAGAACCTGACCGGCGGCATAAGGGTTCCGATGATCCGGGGGGCGAGGGGGGTG
** * *
17650647 TGTGCACATGATGTGCGGTGAGTGCTGGTACTTGGCCCTTATATTGGCCCTTATCCCTCATCAAA
519 TACGCACATGATGTGCGGTGAGTACTGGTACTTGGCCCTTATATTGGCCCCTATCCCTCATCAAA
* * * *
17650712 CCTCGAGAACTCACACCCCTATAAAGAGCATTTGAGATTTTATAGGTTTGCTGGCAGTAGCCATT
584 CCTCAAGAACTCACACCCCTATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATT
**
17650777 AAAGTGTTTGAAATGGGGACACT
649 AAAGTGCGTGAAATGGGGACACT
*
17650800 TTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCAACCTACCA
*
17650865 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG-T-GCCTGCCCGCCCGCC
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTCGCCGGCGTAGTTCGCC-GCCCGCCCGCC
* * *
17650928 CGCTCGTTTGATCGATTAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGATC-GGATT
130 CGCTCATTTCATCGATTAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGA-CAGGATC
* * * *
17650992 GAGGGTTATGGCAGCAGGATCGACAGAATGTAGAGGGGGACCCAACCGATCCCCGGCTTACGCAT
194 GAGGGTTACGACAGCAGGATCGACAGAACGCAGAGGGGGACCCAACCGATCCCCGGCTTACGCAT
* * * * * *
17651057 CTCGCCCCTCTGGTCGGCTG-A-GCGTCGCTCACTCGTTTCATGGGTTGACTTAGGCATACGGAG
259 CCCGCCCCTCTGGCCGACTGAATGC-CCGCACACTCATTTCATGGGTTGACTTAGGCATACGGAG
* * * *
17651120 TTCTTTCCC-GATCTAAGCATACGAAGTTCATTCCT-GATGTAAGATCGGACTGGAC-T-GAGGT
323 TTCATTCCCAG-TCTAAGCATACGAAGTTCATTCCTAG-TCTAAGATCGGA-T-CACATCGAGGG
**
17651181 TTGCGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTCTCTTCGTCGGGGCACCAT
384 TTGCGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTCTCTTCACCGGGGCACCAT
** * *
17651246 CGTCGGAGCATCGCCAGAGAACCTGACCGGTGGCATAAGGGTTCCGATGATCCGGGGGGC-CGGG
449 CACCGGAGCATCGCCAGAGAACCTGACCGGCGGCATAAGGGTTCCGATGATCCGGGGGGCGAGGG
*
17651310 GGGTGTACGCACATGATGT-CGGAT-AGGTACTGGTACTTGGCCCTTGTATTGGCCCCCTATCCC
514 GGGTGTACGCACATGATGTGCGG-TGA-GTACTGGTACTTGGCCCTTATATTGG-CCCCTATCCC
*
17651373 TCATCAAACCTCAAGAACTCACACCCCCT-TAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCA
576 TCATCAAACCTCAAGAACTCACA-CCCCTATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
17651437 GTAACCATTAAAGTGCGTGAAATGGGGACACT
640 GTAACCATTAAAGTGCGTGAAATGGGGACACT
17651469 TTT
1 TTT
17651472 TTCAAATGGT
Statistics
Matches: 594, Mismatches: 67, Indels: 26
0.86 0.10 0.04
Matches are distributed among these distances:
667 4 0.01
668 49 0.08
669 287 0.48
670 142 0.24
671 3 0.01
672 1 0.00
673 108 0.18
ACGTcount: A:0.21, C:0.27, G:0.27, T:0.25
Consensus pattern (671 bp):
TTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCAACCTACCA
CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTCGCCGGCGTAGTTCGCCGCCCGCCCGCCC
GCTCATTTCATCGATTAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGACAGGATCGA
GGGTTACGACAGCAGGATCGACAGAACGCAGAGGGGGACCCAACCGATCCCCGGCTTACGCATCC
CGCCCCTCTGGCCGACTGAATGCCCGCACACTCATTTCATGGGTTGACTTAGGCATACGGAGTTC
ATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGATCACATCGAGGGTTGCGAC
AGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTCTCTTCACCGGGGCACCATCACCGGA
GCATCGCCAGAGAACCTGACCGGCGGCATAAGGGTTCCGATGATCCGGGGGGCGAGGGGGGTGTA
CGCACATGATGTGCGGTGAGTACTGGTACTTGGCCCTTATATTGGCCCCTATCCCTCATCAAACC
TCAAGAACTCACACCCCTATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATTAA
AGTGCGTGAAATGGGGACACT
Found at i:17652065 original size:25 final size:26
Alignment explanation
Indices: 17652014--17652065 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17652004 GTTGACTTAG
* *
17652014 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
17652040 GCATACGAAATTCATT-CCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
17652065 G
1 G
17652066 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 10 0.42
26 14 0.58
ACGTcount: A:0.31, C:0.25, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGAAATTCATTCCCAGTCTAA
Found at i:17652967 original size:25 final size:26
Alignment explanation
Indices: 17652916--17652967 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17652906 GTTGACTTAG
* *
17652916 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
17652942 GCATACGAAATTCATT-CCAGTCTAA
1 GCATACGAAATTCATTCCCAGTCTAA
17652967 G
1 G
17652968 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 10 0.42
26 14 0.58
ACGTcount: A:0.31, C:0.25, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGAAATTCATTCCCAGTCTAA
Found at i:17653886 original size:904 final size:895
Alignment explanation
Indices: 17650800--17657665 Score: 5464
Period size: 902 Copynumber: 7.5 Consensus size: 895
17650790 TGGGGACACT
*** *
17650800 TTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* *
17650865 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG--CCTGCCCGCCCG--
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACCCGCCCGCCCGCC
* * * * *
17650926 CCCGCTCGTTT-GATCGATTAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCCGATCGGA
131 CCCGCTCGTTTCG-TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGA
** ** * * * * ** * *
17650990 TTGAGGGTTATGGCAGCAGGATCGACAGAATGTAGAGGGGGACCCAACCGATCCCCGGCTTACGC
195 CCGAGGGTTGCGGTAGCAGGATCG-CAGCACGCAGAGGGGGA-CCGGCCGATCCTCGGCTTGCGC
* * * * *
17651055 ATCTCGCCCCTCTGGTCGGCTGAGCG-TCGCTCACTCGTTTCATGGGTTGACTTAGGCATACGGA
258 ATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGA
* * *
17651119 GTTCTTTCCC-GATCTAAGCATACGAAGTTCATTCCT-GATGTAAGATCGGACTGGACTGAGGTT
323 GTTCATTCCCAG-TCTAAGCATACGAAGTTCATTCCTAG-TCTAAGATCGGAC----C-GAGGGT
* * *
17651182 TGCGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTCTCTTCGTCGGGGCACCATC
381 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC
** * ** * *
17651247 G-TCGGAGCATCGCCAGAGAACCTGACCGGTGGCATAAGGGTTCCGATGATCCGGGGGGCCGGGG
446 GCT-GGAGCATCGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGAT-CGGGGGGCCGGGG
* * *
17651311 GGTGTACGCACATGATGTCGGATAGGTACTGGTACTTGGCCCTTGTATTGGCCCCCTATCCCTCA
509 GGTGTACGCACATGATGTGGGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA
* * *
17651376 TCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTAA
574 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
*
17651441 CCATTAAAGTG-CGTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAATTCGAG
639 CCATTAAAGTGTC-TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
* *
17651505 TTTTTAGCTGAATTTTTTTGCGCATGCCAAAAAAAAATACAATGATCACGTCTACCAAGTTTGGG
703 TTTTTAGCTGAATTTTTTTGTGCATGCC-AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGG
*
17651570 TCCAAAACTCCTT-TCGAAAAAATTTTAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTG
767 GCCAAAACTCCTTCT-GAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTG
* *
17651633 AAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGTGACCATTGTATGA
830 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGA
17651698 A
895 A
* ****
17651699 TTTACAAGCCATAAAAATGGAATTGGCTTGCAGAAATATGAAGATGTGCCTAAACCCACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * *
17651764 CCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGATGTAGT--ACCCGCCCGCCTGTC
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACCCGCCCGCCCG-C
* * **
17651827 CGCCTGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAG
130 C-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG
* * * * *
17651892 ACCAAGGGTTGCGGTAGTAGAATCGGCAGCATGCA-ACGGGGGACCTGGCCGATCCTTGGCTTGC
194 ACCGAGGGTTGCGGTAGCAGGATC-GCAGCACGCAGA-GGGGGACC-GGCCGATCCTCGGCTTGC
* *
17651956 GCATCCCGCCCCTCTGGCTGGCTGAGCGCCCGCACGATCGTTTCATGGGTTGACTTAGGCATACG
256 GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACG
*
17652021 GAGTTCATTCCCAGTCTAAGCATACGAAATTCATTCC-AGTCTAAGATCGGACCGGACTGAGGGT
321 GAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGA-C---C-GAGGGT
*
17652085 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATC
381 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC
17652150 GCTGGAGCATCGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGGGGGGCCGGGGGG
446 GCTGGAGCATCGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGGGGGGCCGGGGGG
* * *
17652215 TGTACGCACATGGTATGGGATGGGTACTGGTACTTGGCCCTTACATTGGCCCCCTATCCCTCATC
511 TGTACGCACATGATGTGGGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
* *
17652280 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTAACC
576 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
* *
17652345 ATTAAAGTGCCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAATTCGAGTTT
641 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * *
17652410 TTAGCTGAATTTTTTTGCGCATGCCAAAAAAAAATACAATGATCACGTCTACCAAGTTTGGGTCC
706 TTAGCTGAATTTTTTTGTGCATGCC-AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
17652475 AAAACTCCTT-TCGAAAAAATTTTAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTGAAA
770 AAAACTCCTTCT-GAAAAAATTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCGTGAAA
* *
17652538 AATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGTGACCATTGTATGAA
833 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
* ****
17652601 TTTACAAGCCATAAAAATGGAATTGGCTTGCAGAAATATGAAGATGTGCCTAAACCCACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * *
17652666 CCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGATGTAGT--ACCCGCCCGCCTGTC
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACCCGCCCGCCCG-C
* * **
17652729 CGCCTGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAG
130 C-CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG
* * * * *
17652794 ACCAAGGGTTGCGGTAGTAGAATCGGCAGCATGCA-ACGGGGGACCTGGCCGATCCTTGGCTTGC
194 ACCGAGGGTTGCGGTAGCAGGATC-GCAGCACGCAGA-GGGGGACC-GGCCGATCCTCGGCTTGC
* *
17652858 GCATCCCGCCCCTCTGGCTGGCTGAGCGCCCGCACGATCGTTTCATGGGTTGACTTAGGCATACG
256 GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACG
*
17652923 GAGTTCATTCCCAGTCTAAGCATACGAAATTCATTCC-AGTCTAAGATCGGACTGGACCGAGGGT
321 GAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGAT----C-GGACCGAGGGT
*
17652987 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATC
381 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC
17653052 GCTGGAGCATCGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGGAGGGGCCGGGGG
446 GCTGGAGCATCGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGG-GGGGCC-GGGG
* * *
17653117 GGTGTACGCACATGGTATGGGATGGGTACTGGTACTTGGCCCTTACATTGGCCCCCTATCCCTCA
509 GGTGTACGCACATGATGTGGGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA
*
17653182 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTAG
574 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
*
17653247 CCATTAAAGTG-CTGAAATGGGGACACTTTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGT
639 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
*
17653311 TTTTAGCTGAATCTTTTTGTGCATGCCAAAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGG
704 TTTTAGCTGAATTTTTTTGTGCATGCC--AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGG
* ** *
17653376 GCCAAAAATCCTTCTGAAAAAATTTTAAAAAATCTCGAATTGTAAAAAGTTTCAAAAATCATGAA
767 GCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAA
* *
17653441 AAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTTAAGGCTTAAGGGACCATTGTATGAA
832 AAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
*
17653505 TTTACAAGCCATAAAAATGGCATTCGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * * * * * *
17653570 CACTATCAATCCATGGCTTGCGCATCCCGTTTCTCTGGCCAACGTAGTGCTCACCTGTCCGCCCG
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--CACCCGCCCGCCCG
* ** * * * *
17653635 CCTACCCGCTCATTTTTTTGGTTGCCTTAGGCATGCGGAGTTCATTCCTAGTCTAAGATCAGACC
129 CC--CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC
* ** * * *
17653700 AGACCAAGGGTTGCGACAGCAGGATCTGTAGCACGCAGAGGGGGACTCGACCGATCCTCGACTTG
192 AGACCGAGGGTTGCGGTAGCAGGATC-GCAGCACGCAGAGGGGGAC-CGGCCGATCCTCGGCTTG
* * * * *
17653765 CGCATCCCGCCCTTTTAGCCGGCTGAGCGCCCGAACGCTCGTTTCATGGGTTGACTTAGGCATGC
255 CGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATAC
* * *
17653830 GGAGTTCATTCCTAGTCTAAGCATATGGAGTTCATTCCTAGTCTAAGATCGGACCGAATCGAGGG
320 GGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGA-C----CGAGGG
* * * ** * * ** ** *
17653895 TTGCGGCAATAGGATCAGCAGCACGCAGAGGGGGACCCGACCGATCCT-CGGGTTACGCATCCTG
380 TT---GC----GG--CAGCA-CATGC----TGGG-CTCGGGC-AT-GTGCTGGTGCCGCATTTTT
* * ** * * ** *** ** * *** * *
17653959 C-CCCTCCAGCCTGCTTTACGCCCACACGC-TCGTTTCGTG-GGTTGATTTA-GGCA-TACGAAG
428 CTTCGTCGGGGC-ACCAT-CG-CTGGA-GCATCG-TGAGAGAACCTGACTGACGGCATTA-G--G
* * *** * * * * * *
17654019 TTCATTCCCAGTCTAAGATCAGATCGGACTGAGGGT-TGCGACAGCA-GATGCTGGGCTCGGGCA
485 ---GTT-CC-G-GT--GATC-GGGGGGCCGGGGGGTGTACG-CA-CATGATG-TGGGAT-GGGTA
* * * * * * * * * ***
17654082 -T-GTGC-TGATGCCATATTTTTCTTCGTCGGGGCACC-ATCGCTGGAGC-ATTGTCGGAGAACC
537 CTGGTACTTG--GCC---CTTAT-AT--T--GGCCCCCTATCCCT-CATCAAACCTC-GAGAA-C
* * * *** * ** * ** **** * * *
17654142 TGAC-CGGCGGCATTGGGGTTCCGGCGATCGGGGGGGTTGGGGGGTGTGC-GCACATGATGTGCG
589 TCACAC--C-CCCTTAAAG----AGC-AT-TTGAGATTTTACAGGTTTGCTGC-CA-G-T-AGCC
** * * * ** ** * ** *
17654205 A-T-GGGTG-CTGGTACAT--GG-CCCTTATATTGGCCCCCTATCACTCATCAAACCTCAAGAAC
641 ATTAAAGTGTCT-G-AAATGGGGACACTT-T-TT----TCAAAT-GGTCA-CAAA-ATCTTGTAC
** *** *** ** *
17654264 TAACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC-ATTAAAGTGACT
695 --ACTTCGAGTT-TTTAGC---TGA-ATTTT-----TTTG-TG-CA-T-GCCAAAAAAAAT-AC-
* * ** ** * * * *
17654328 GAAATGGGGA-CACTTTTTTCAA----ACGGTCACAAACT-CTTGT-ACACTTCAAGTTTT----
742 --AA---GGATCACGTCTACCAAGTTTGGGGCCA-AAACTCCTTCTGA-A---AAAATTTTAAAA
* * * **** * ** * **
17654382 TAGCT-GAA-TGT-TTTTG-TGCATGCCAA-C---AAAAATACAAGGATCACGTCTACCAAGT-T
797 AATCTCGAACCGTAAAAAGTTTCA--AAAATCGTGAAAAATAGAA--A--ACGAGT--C--GTCT
* * * ** *** *** * **
17654438 TGGGGC-TAAAACTTCTTTCGAAAAAATTTTAAAAAATCTCGAACTGTAAAAA
852 T--GCCATGAAACTTC--ACG-TGAAGGCTTAAGGGA-C-C--ATTGTATGAA
* ** *
17654490 TTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTGGC-CAT-GAAACTTCATGTAAAGGCTTA
1 -TTT-ACAA----G--CCATA-AAAATG-G-CAT-TGGCACATAGAAA--T-ATG--AA-G---A
* * ** *** ** * * *** * * * *** *** *
17654553 AGGGACCATTGTATGAATTTACAAGCCTTAAAAATGGCATTGGCACGTAGAAATATGAAGATGTA
45 TGTG-CC--TAAACCCACCTACCA-CCCTATCGAT-CCA-CGG--C-TTG-CGCATCCCG-TCT-
** * * * * ** * * *
17654618 C-CTAAACCCACCTA--CCACCCTATCGATCCATGGCTTGCACATCCCGTCTC-TCTGGCCGACG
98 CTCT-GGCCGACGTAGTGCA-CC---CG--CC--CGCCCGC-C--CCCG-CTCGTTTCGTCG--G
* * ** * * * *
17654679 TTGTGC-TCGCCCACCCGCCGCCTGTCGACTCATTTCGTCTATCGGCTTAGGCATACGGAGTTCA
148 TTG-GCTTAG-GCATACG--G--AGT----TCA-TTC--CCA--GTC-TAAG-AT-C--AG---A
* * *** * * * *
17654743 TTCCCAAACCAAGGGTTATAGCAGTAGGATCGGCAGCACGCAGAGGGGGACCCAGCTGATCCTCG
190 ---CCAGACCGAGGGTTGCGGTAGCAGGATC-GCAGCACGCAGAGGGGGA-CCGGCCGATCCTCG
* * * * * * *
17654808 GCTTACGCATCCCGCCCTTCTGGCCGACTGAGGGACCGAACGCTCGTTTCGTGGGTTGACTTAGG
250 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGG
* * * *
17654873 AATACGTAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCTAGTCTAAGATCGGACTGGACC
315 CATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGAT----C-GGACC
* * * **
17654938 GAGGGTTGTGGCAGCACATACTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCACCGGGGC
375 GAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGC
* * * * * *** *
17655003 ACCATTGCCGGAGCATCGTCG-GAGAACCTGACTGGCGGTATTGGGGTTCCAACGATCGGGGGGG
440 ACCATCGCTGGAGCATCGT-GAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGGGGGGC
* *
17655067 CGGGGGGTGTACGCACATGATGTGCGATGGGTGCTAGG-ACTTGGCCCTTATATTGGCCCCCTAT
504 CGGGGGGTGTACGCACATGATGTGGGATGGGTACT-GGTACTTGGCCCTTATATTGGCCCCCTAT
* * *
17655131 CCCTCATC-AACTTCGAGAACTCTCACCCCCTTAAAGAGC-TGTTGAGATTTTACAAGTTTGCTG
568 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT-TTGAGATTTTACAGGTTTGCTG
17655194 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
632 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * *
17655259 TTCGAGTTTTTTGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTATCAAGT
697 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
* * ** * *
17655324 TTTGGGCCAAAATTTATTC-CAAAAATATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAAT
762 TTGGGGCCAAAACTCCTTCTGAAAAA-ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAAT
* *
17655388 CGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACGATTGT
826 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
17655453 ATGAA
891 ATGAA
17655458 TTTACAAGCCATAAAAATGGCATTGGCATGCA-A-AAATATGAAGATGTGCCTAAACCCACCTAC
1 TTTACAAGCCATAAAAATGGCATTGGCA--CATAGAAATATGAAGATGTGCCTAAACCCACCTAC
* * *** * *
17655521 CACCCTATCGATTCACGGCTTGCGCATCCCATCTCTCTGAAAGGCGTAGTGC-CCGCCCACTCGC
64 CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACC-CGC-C-CGC
* * * * *
17655585 CCGCCCGTCCCACTCCTTTTGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATC-
126 CCG-CC--CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
** * * * * *
17655649 GAATAGGACTGAGGGTTGCGGTAGCAAGATCGACAGCACGCAGAGGGTGACCCGGCTGATCCCCG
188 GACCA-GACCGAGGGTTGCGGTAGCAGGATCG-CAGCACGCAGAGGGGGA-CCGGCCGATCCTCG
* * * **
17655714 ACTTGCGCATCCCGCCCCTCTGGCTGGCTGAGTGCCCGCACGCTCGTTTCGCGGGTTGACTTAGG
250 GCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGG
** *
17655779 CATACAAAGTTCATTCCTAGTCTAAG-AT-CG--G---------A--C-----T-GGACCGAGGG
315 CATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAGGG
** * *
17655823 TTATGGCAGCACATGCTAGGCTAGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAT
380 TTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAT
** * * *
17655888 CGCCAGAGCATCATCG-GAGAACCTGA-TCGGCGGCATTGGGGTTCC-GTCGATCGGGGGGCCGG
445 CGCTGGAGCATCGT-GAGAGAACCTGACT-GACGGCATTAGGGTTCCGGT-GATCGGGGGGCCGG
* * * **
17655950 GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCGGCTATCCCT
507 GGGGTGTACGCACATGATGTGGGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
* *
17656015 CATCAAACCTCAAGAACTCACA-CCCCTTGAAA-AGCATTTGAGATTTTACAGGTTTGCTACCAG
572 CATCAAACCTCGAGAACTCACACCCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
17656078 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
636 TAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAATGGTCACAAAATCTTGTACACTTC
* * * *
17656143 GAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCCCGTCTACAAAGTTT-
700 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTG
** * * *
17656207 GGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAGAGATTCGAAAATCGTG
765 GGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTG
* *
17656272 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAGGTGAAGGCTTAAGCGACCATTGTATGA
830 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGA
17656337 A
895 A
17656338 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * * * *
17656403 CACTATCGATCCATGGCTTGCGCATCCCATCTCTCTGGTCGGCGTAGTG--CCCGCCCGCCCG--
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACCCGCCCGCCCGCC
* * *
17656464 TCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATCAGACCAGAC
131 CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
* * * * * * *
17656529 CGAGGGTTGCGGCAGCAAGATCAGCAGCAAGTAGAGGGGGACCTGGCCAATCCTCGGCCTGTGCA
196 CGAGGGTTGCGGTAGCAGGATC-GCAGCACGCAGAGGGGGACC-GGCCGATCCTCGGCTTGCGCA
* * *
17656594 TCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAG
259 TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAG
* * *
17656659 TTCATTCCCTGTCTAAGCATACGAAGTTCATT-CTCAGTCTAAGATTGGACCGGACCGAGGATTA
324 TTCATTCCCAGTCTAAGCATACGAAGTTCATTCCT-AGTCTAAGA-T----CGGACCGAGGGTTG
* * *** * ** * *
17656723 TGGCAGCACATGCTTGGCTCGGGCATGCATTGGTGCCGTATTTTTCTTCCCCGAGGCACCATCAC
383 CGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGC
* * * * ** * *** *
17656788 CGGAGCATCGTCAGAGAACATGACCGACGATATTGGGGTTCCAACGATC-----G--GGGAGGTG
448 TGGAGCATCGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGGGGGGCCGGGGGGTG
* * * *
17656846 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAA
513 TACGCACATGATGTGGGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
17656911 ACATCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCAT
578 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* * *
17656976 TAATGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTT
643 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * * * * *
17657041 AGCTGAATTTTTTTATGCATACCAAAGAAAACACAATGATCACATCTACCAAGTTTGGGCCCAAA
708 AGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * ** * *
17657106 ACGCCTTCCGAAAAAATTTTAAAAAATCCCGAACTATAAAAAGTTTCGAAAATCATGAAAAATAG
773 ACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
17657171 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
838 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
** **
17657229 TTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGATTAAACCCACCTACCA
1 TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
* * * * * *
17657294 CCCTATCGATCCACGGCTCGCACATCCCGTCTTTCTAGCCGATGTAGTG--CCCGCCCGCCTGCC
66 CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACCCGCCCGCCCGCC
* * ** * *
17657357 CGCACGCTTGTTTCGTCGGTTCGCTTAGGCATACGGAGTTCATTCATAGTCTAAGATCGGATCAG
131 C-C-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG
** * * *
17657422 ATTGAGGGTTGTGGTAGCCGGATCGACAACACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCG
194 ACCGAGGGTTGCGGTAGCAGGATCG-CAGCACGCAGAGGGGGA-CCGGCCGATCCTCGGCTTGCG
* * *
17657487 CATCCCGCCCCTTTGGCCGGTTGAGCGCCCGCACGCTCGTTTCATGAGTTGACTTAGGCATACGG
257 CATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGG
* * * *
17657552 AGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCTAGGATT
322 AGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCG-----AGGGTT
* *
17657617 GTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
382 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
17657666 TGCAGGCTGA
Statistics
Matches: 4861, Mismatches: 753, Indels: 710
0.77 0.12 0.11
Matches are distributed among these distances:
870 2 0.00
871 173 0.04
872 6 0.00
873 2 0.00
875 1 0.00
876 6 0.00
877 1 0.00
878 4 0.00
879 6 0.00
880 462 0.10
881 116 0.02
884 1 0.00
886 2 0.00
890 181 0.04
891 295 0.06
892 2 0.00
893 1 0.00
894 3 0.00
895 252 0.05
896 3 0.00
897 103 0.02
899 117 0.02
902 889 0.18
903 328 0.07
904 469 0.10
905 9 0.00
906 125 0.03
907 5 0.00
908 205 0.04
909 20 0.00
911 1 0.00
912 2 0.00
914 1 0.00
915 2 0.00
916 5 0.00
917 1 0.00
918 5 0.00
919 6 0.00
921 3 0.00
922 3 0.00
923 3 0.00
924 9 0.00
925 16 0.00
926 10 0.00
927 10 0.00
928 7 0.00
930 6 0.00
931 8 0.00
932 5 0.00
933 15 0.00
934 8 0.00
935 13 0.00
936 18 0.00
937 12 0.00
938 4 0.00
939 5 0.00
940 3 0.00
941 1 0.00
942 1 0.00
943 10 0.00
944 15 0.00
945 10 0.00
946 8 0.00
947 4 0.00
948 2 0.00
949 3 0.00
951 2 0.00
952 4 0.00
953 18 0.00
954 9 0.00
955 8 0.00
956 11 0.00
957 2 0.00
958 4 0.00
959 11 0.00
960 6 0.00
961 4 0.00
962 6 0.00
964 5 0.00
965 3 0.00
966 3 0.00
967 3 0.00
968 10 0.00
969 4 0.00
970 9 0.00
971 4 0.00
972 22 0.00
973 7 0.00
974 17 0.00
975 24 0.00
976 18 0.00
977 21 0.00
978 25 0.01
979 14 0.00
980 12 0.00
981 22 0.00
982 4 0.00
983 10 0.00
985 7 0.00
986 8 0.00
987 6 0.00
990 2 0.00
991 6 0.00
993 8 0.00
994 10 0.00
995 8 0.00
996 8 0.00
997 4 0.00
998 6 0.00
999 5 0.00
1000 9 0.00
1001 18 0.00
1002 6 0.00
1003 2 0.00
1004 3 0.00
1005 2 0.00
1007 11 0.00
1008 7 0.00
1009 5 0.00
1010 9 0.00
1011 10 0.00
1012 8 0.00
1013 5 0.00
1014 3 0.00
1015 5 0.00
1016 11 0.00
1018 4 0.00
1019 10 0.00
1020 20 0.00
1021 18 0.00
1022 3 0.00
1023 6 0.00
1024 266 0.05
1025 331 0.07
1026 288 0.06
1027 473 0.10
1028 311 0.06
1029 511 0.11
1030 320 0.07
1031 328 0.07
1032 393 0.08
1033 272 0.06
1034 188 0.04
1035 243 0.05
1036 222 0.05
1037 192 0.04
1038 216 0.04
1039 273 0.06
1040 263 0.05
1041 180 0.04
1042 262 0.05
1043 237 0.05
1044 201 0.04
1045 247 0.05
1046 243 0.05
1047 208 0.04
1048 349 0.07
1049 122 0.03
1050 105 0.02
1051 118 0.02
1052 220 0.05
1053 99 0.02
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (895 bp):
TTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCA
CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCACCCGCCCGCCCGCC
CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
CGAGGGTTGCGGTAGCAGGATCGCAGCACGCAGAGGGGGACCGGCCGATCCTCGGCTTGCGCATC
CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTT
CATTCCCAGTCTAAGCATACGAAGTTCATTCCTAGTCTAAGATCGGACCGAGGGTTGCGGCAGCA
CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCTGGAGCAT
CGTGAGAGAACCTGACTGACGGCATTAGGGTTCCGGTGATCGGGGGGCCGGGGGGTGTACGCACA
TGATGTGGGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
TTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
TGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAG
TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
Found at i:17653990 original size:185 final size:185
Alignment explanation
Indices: 17653671--17654035 Score: 475
Period size: 185 Copynumber: 2.0 Consensus size: 185
17653661 TTAGGCATGC
* * *
17653671 GGAGTTCATTCCTAGTCTAAGATCAGACCAGACCAAGGGTTGCGACAGCAGGATCTGTAGCACGC
1 GGAGTTCATTCCTAGTCTAAGATCAGACCAGACCAAGGGTTGCGACAACAGGATCAGCAGCACGC
* * * **
17653736 AGAGGGGGACTCGACCGATCCTCGACTTGCGCATCCCGCCCTTTTAGCCGGCTGAGCGCCCGAAC
66 AGAGGGGGACCCGACCGATCCTCGACTTACGCATCCCGCCCCTCCAGCCGGCTGAGCGCCCGAAC
* * *
17653801 GCTCGTTTCATGGGTTGACTTAGGCATGCGGAGTTCATTCCTAGTCTAAGCATAT
131 GCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATAT
* * * * *
17653856 GGAGTTCATTCCTAGTCTAAGATCGGACC-GAATCGAGGGTTGCGGCAATAGGATCAGCAGCACG
1 GGAGTTCATTCCTAGTCTAAGATCAGACCAG-ACCAAGGGTTGCGACAACAGGATCAGCAGCACG
** * * *
17653920 CAGAGGGGGACCCGACCGATCCTCGGGTTACGCATCCTGCCCCTCCAGCCTGCTTTA-CGCCC-A
65 CAGAGGGGGACCCGACCGATCCTCGACTTACGCATCCCGCCCCTCCAGCCGGC-TGAGCGCCCGA
* *
17653983 CACGCTCGTTTCGTGGGTTGATTTAGGCATACGAAGTTCATTCCCAGTCTAAG
129 -ACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAG
17654036 ATCAGATCGG
Statistics
Matches: 154, Mismatches: 23, Indels: 6
0.84 0.13 0.03
Matches are distributed among these distances:
184 2 0.01
185 150 0.97
186 2 0.01
ACGTcount: A:0.21, C:0.28, G:0.27, T:0.23
Consensus pattern (185 bp):
GGAGTTCATTCCTAGTCTAAGATCAGACCAGACCAAGGGTTGCGACAACAGGATCAGCAGCACGC
AGAGGGGGACCCGACCGATCCTCGACTTACGCATCCCGCCCCTCCAGCCGGCTGAGCGCCCGAAC
GCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATAT
Found at i:17656013 original size:880 final size:872
Alignment explanation
Indices: 17653850--17657570 Score: 4351
Period size: 880 Copynumber: 4.2 Consensus size: 872
17653840 CCTAGTCTAA
* * * ** * * ** *
17653850 GCATATGGAGTTCATTCCTAGTCTAAGATCGGACCGAATCGAGGGTTGCGGCAATAGGATC-AGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGAATAGACT-GAGGGTTGCGGTAGCAAGATCGA-C
* * * * ** *
17653914 AGCACGCAGAGGGGGACCCGACCGATCCTCGGGTTACGCATCCTGCCCCTCCAGCCTG-CTTTA-
64 AGCACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCC-GAC-TGAG
* * * *
17653977 CGCCCACACGCTCGTTTCGTGGGTTGATTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGA
127 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGA
* ** * * * **
17654042 -TCGGACTGAGGGTTGCGACAGCAGATGCTGGGCTCGGGCATGTGCTGATGCCATATTTTTCTTC
192 CT-GGACCGAGGGTTATGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
* * * **
17654106 GTCGGGGCACCATCGCTGGAGCATTGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATC
256 GCCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCAACGATC
* *
17654171 GGGGGGGTTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACATGGCCCTTATATTGGC
321 -GGGGGG-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
* *
17654236 CCCCTATCACTCATCAAACCTCAAGAACTAACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
384 CCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* * *
17654301 TTGCTGCCAGTAGCCATTAAAGTGACTGAAATGGGGACACTTTTTTCAAACGGTCACAAACTCTT
449 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * *
17654366 GTACACTTCAAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
514 GTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTA
* * * * *
17654431 CCAAGTTTGGGGCTAAAACTTCTTTCGAAAAAATTTTAAAAAATCTCGAACTGTAAAAA-TTTTG
579 CCAAGTTT-GGGCCAAAAC-TCCTTCCAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCG
* * * *
17654495 AAAATCGTGAAAAATAGAAAATGAGTCGTCTGGCCATGAAACTTCATGTAAAGGCTTAAGGGACC
642 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* * * * *
17654560 ATTGTATGAATTTACAAGCCTTAAAAATGGCATTGGCACGTAGAAATATGAAGATGTACCTAAAC
707 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAAC
* * * * *
17654625 CCACCTACCACCCTATCGATCCATGGCTTGCACATCCCGTCTCTCTGGCCGACGTTGTGCTCGCC
772 CCACCTACCACCCTATCGATCCACGGCTTGCACATCCCATCTCTCTGACCGACGTAGTGCCCGCC
* * * *
17654690 CACCCGCCGCCTGTCGACTCATTTCGTCTA-TCGGCTTAG
837 CGCCCG-C-CC-GTCCACTCGTTTCGTC-AGTTGGCTTAG
* ** * * * *
17654729 GCATACGGAGTTCATT-CC---C-AA-A-C-CA-AGGGTTA---TAGCAGTAG---GATCGGCAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGAATAGACTGAGGGTTGCGGTAGCAAGATCGACAG
* * * * * *
17654779 CACGCAGAGGGGGACCCAGCTGATCCTCGGCTTACGCATCCCGCCCTTCTGGCCGACTGAGGGAC
66 CACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCC
*
17654844 CGAACGCTCGTTTCGTGGGTTGACTTAGGAATACGTAGTTCATTCCCAGTCTAAGCATATGGAGT
131 CGCACGCTCGTTTCGTGGGTTGAC-T-----TA-G--G--CA-T---A--C---G---A---AGT
* *
17654909 TCATTCCTAGTCTAAGATCGGACTGGACCGAGGGTTGTGGCAGCACATACTGGGCTCGGGCATGT
170 TCATTCCTAGTCTAAGATCGGACTGGACCGAGGGTTATGGCAGCACATGCTGGGCTCGGGCATGT
* * * *
17654974 GCTGGTGTCGCATTTTTCTTCACCGGGGCACCATTGCCGGAGCATCGTCGGAGAACCTGACTGGC
235 GCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGC
* *
17655039 GGTATTGGGGTTCCAACGATCGGGGGGGCGGGGGGTGTACGCACATGATGTGCGATGGGTGCTAG
300 GGCATTGGGGTTCCAACGATC-GGGGGGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT-G
* * *
17655104 G-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATC-AACTTCGAGAACTCTCACCCCCTTAAAG
363 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAG
*
17655167 AGC-TGTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
428 AGCAT-TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
17655231 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTTGCTGAATTTTTTTATGCATGCCAAC
492 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAC
* * ** *
17655296 AAAAATACAAGGATCACGTCTATCAAGTTTTGGGCCAAAATTTATTCCAAAAATATTTAAAAAAA
557 AAAAATACAAGGATCACGTCTACCAAG-TTTGGGCCAAAACTCCTTCCAAAAA-ATTTTAAAAAA
* *
17655361 TCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACT
620 TCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
*
17655426 TCACGTGAAGGCTTAAGGGACGATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAA
685 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAA
* *
17655491 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCATCTC
750 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCATCTC
** * * *
17655556 TCTGAAAGGCGTAGTGCCCGCCCACTCGCCCGCCCGTCCCACTCCTTTTGTCAGTTGGCTTAG
815 TCTGACCGACGTAGTGCCCG--C-C-CGCCCGCCCGT-CCACTCGTTTCGTCAGTTGGCTTAG
*
17655619 GCATACGGAGTTCATTCCCAATCTAAGATCGAATAGGACTGAGGGTTGCGGTAGCAAGATCGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGAATA-GACTGAGGGTTGCGGTAGCAAGATCGACA
* * * * * * *
17655684 GCACGCAGAGGGTGACCCGGCTGATCCCCGACTTGCGCATCCCGCCCCTCTGGCTGGCTGAGTGC
65 GCACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGC
* *
17655749 CCGCACGCTCGTTTCGCGGGTTGACTTAGGCATACAAAGTTCATTCCTAGTCTAAGATCGGACTG
130 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACTG
* * *
17655814 GACCGAGGGTTATGGCAGCACATGCTAGGCTAGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCG
195 GACCGAGGGTTATGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCG
* * * **
17655879 GGGCACCATCGCCAGAGCATCATCGGAGAACCTGATCGGCGGCATTGGGGTTCCGTCGATCGGGG
260 GGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCAACGATCGGGG
**
17655944 GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCGGCT
325 GG-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
17656009 ATCCCTCATCAAACCTCAAGAACTCACA-CCCCTTGAAA-AGCATTTGAGATTTTACAGGTTTGC
389 ATCCCTCATCAAACCTCAAGAACTCACACCCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGC
*
17656072 TACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTTCAAATGGTCACAAAATCTTGTA
453 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAATGGTCACAAAATCTTGTA
* * * *
17656137 CACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCCCGTCTACAA
517 CACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* *
17656202 AGTTTGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTCGAACCGTAAAGAGATTCGAAAA
582 AGTTTGGGCCAAAACTCCTTCC-AAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAA
* *
17656267 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAGGTGAAGGCTTAAGCGACCATTG
646 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
17656332 TATGAATTTACAAGCCATAAAAATGGCATTGGCA--CATAGAAATATGAAGATGTGCCTAAACCC
711 TATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA-A-AAATATGAAGATGTGCCTAAACCC
* * * ** *
17656395 ACCTACCACACTATCGATCCATGGCTTGCGCATCCCATCTCTCTGGTCGGCGTAGT----GCCCG
774 ACCTACCACCCTATCGATCCACGGCTTGCACATCCCATCTCTCTGACCGACGTAGTGCCCGCCCG
* *
17656456 CCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAG
839 CCCGCCCGTCCACTCGTTTCGTCAGTTGGCTTAG
* * ** * *
17656490 GCATATGGAGTTCATTCCTAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAAGATC-AGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATC-GAATAGACTGAGGGTTGCGGTAGCAAGATCGA-C
* * * * * *
17656554 AGCAAGTAGAGGGGGACCTGGCCAATCCTCGGCCTGTGCATCCCGCCCCTCTGGCCGACTGAGCG
64 AGCACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCG
* *
17656619 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCT-GTCTAAGCATACGA
129 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATT-CCTAGTCTAAG-AT-CG-
*
17656683 AGTTCATTCTCAGTCTAAGATTGGACCGGACCGAGGATTATGGCAGCACATGCTTGGCTCGGGCA
190 -G---------A--C------TGGACC-GA--G-GG-TTATGGCAGCACATGCTGGGCTCGGGCA
*** * * * * * *
17656748 TGCATTGGTGCCGTATTTTTCTTCCCCGAGGCACCATCACCGGAGCATCGTCAGAGAACATGACC
232 TGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACC
* ** *
17656813 GACGATATTGGGGTTCCAACGATC-----G-GGGAGGTGTGCGCACATGATGTGCGATGGGTGCT
297 GGCGGCATTGGGGTTCCAACGATCGGGGGGCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* * *
17656872 GGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACATCGAGAACTCACACCCCCTTAAA
362 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAA
* * *
17656937 GAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAATGTGTCTAAAATGGGGACACTTT
427 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
17657002 TTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTATGCATACCAA-
492 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAC
* * * *
17657066 AGAAAACACAATGATCACATCTACCAAGTTTGGGCCCAAAACGCCTTCCGAAAAAATTTTAAAAA
557 A-AAAATACAAGGATCACGTCTACCAAGTTTGGG-CCAAAACTCCTTCC-AAAAAATTTTAAAAA
* ** *
17657131 ATCCCGAACTATAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
619 ATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
*
17657196 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTA
684 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
* ** * *
17657261 GAAATATGAAGATGTGATTAAACCCACCTACCACCCTATCGATCCACGGCTCGCACATCCCGTCT
749 AAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCATCT
* * * * * * *
17657326 TTCT-AGCCGATGTAGTGCCCGCCCGCCTGCCCG-CACGCTTGTTTCGTCGGTTCGCTTAG
814 CTCTGA-CCGACGTAGTGCCCGCCCGCCCGCCCGTC-CACTCGTTTCGTCAGTTGGCTTAG
** * * * **
17657385 GCATACGGAGTTCATTCATAGTCTAAGATCGGATCAGATTGAGGGTTGTGGTAGCCGGATCGACA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGAAT-AGACTGAGGGTTGCGGTAGCAAGATCGACA
* * **
17657450 ACACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTTTGGCCGGTTGAGCGC
65 GCACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGC
* * * * *
17657515 CCGCACGCTCGTTTCATGAGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAG
130 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCTAGTCTAAG
17657571 CATACGGAGT
Statistics
Matches: 2450, Mismatches: 282, Indels: 204
0.83 0.10 0.07
Matches are distributed among these distances:
862 3 0.00
863 77 0.03
864 1 0.00
866 5 0.00
869 3 0.00
870 4 0.00
871 174 0.07
872 21 0.01
873 4 0.00
874 5 0.00
875 3 0.00
876 1 0.00
878 4 0.00
879 24 0.01
880 488 0.20
881 113 0.05
883 2 0.00
884 1 0.00
886 12 0.00
887 202 0.08
888 243 0.10
889 146 0.06
890 216 0.09
891 281 0.11
892 12 0.00
893 3 0.00
894 6 0.00
895 192 0.08
896 4 0.00
897 99 0.04
898 1 0.00
899 2 0.00
900 5 0.00
903 7 0.00
905 1 0.00
906 85 0.03
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (872 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGAATAGACTGAGGGTTGCGGTAGCAAGATCGACAG
CACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCC
CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCGGACTGG
ACCGAGGGTTATGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGG
GGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCAACGATCGGGGG
GCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
CCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
TCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
TGGGCCAAAACTCCTTCCAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTG
AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGA
ATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACC
ACCCTATCGATCCACGGCTTGCACATCCCATCTCTCTGACCGACGTAGTGCCCGCCCGCCCGCCC
GTCCACTCGTTTCGTCAGTTGGCTTAG
Found at i:17656686 original size:26 final size:26
Alignment explanation
Indices: 17656649--17656701 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17656639 GTTGACTTAG
* *
17656649 GCATACGGAGTTCATTCCCTGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17656675 GCATACGAAGTTCATTCTCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17656701 G
1 G
17656702 ATTGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17657221 original size:891 final size:892
Alignment explanation
Indices: 17655778--17657665 Score: 2649
Period size: 891 Copynumber: 2.1 Consensus size: 892
17655768 GTTGACTTAG
* * * * *
17655778 GCATACAAAGTTCATTCCTAGTCTAAGATCGGACTGGACCGAGGGTTATGGCAGCACATGCTAGG
1 GCATACGAAGTTCATTCC-AGTCTAAGATCGGACCGGACCGAGGATTGTGGCAGCACATGCTGGG
* * * *
17655843 CTAGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCATCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* **
17655908 ACCTGATCGGCGGCATTGGGGTTCCGTCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
130 ACCTGACCGGCGGCATTGGGGTTCCAACGATC----GG-CGGGGGGTGTGCGCACATGATGTGCG
**
17655973 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCGGCTATCCCTCATCAAACCTCAAGAACTCACA-
190 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
*
17656037 CCCCTTGAAA-AGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATG
255 CCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
17656101 GGGACACTTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTG
319 GGGACAC-TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTA
* * *
17656166 TGCATGCCAACAAAAATACAAGGATCCCGTCTACAAAGTTTGGGCCAAAACTCCTTCCAAAAAAA
383 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCCGAAAAAA
* *
17656231 TTTTAAAAAATCTCGAACCGTAAAGAGATTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
448 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
17656296 CCATGAAACTTCAGGTGAAGGCTTAAGCGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
513 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
17656361 TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACACTATCGATCCATGGCTTGCGC
578 TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCAC
* *
17656426 ATCCCATCTCTCTGGTCGGCGTAGT-GCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAG
643 ATCCCATCTCTCTGGCCGACGTAGTCGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAG
* *
17656490 GCATATGGAGTTCATTCCTAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAAGATC-AGC
708 GCATACGGAGTTCATTCCTAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAAGATCGA-C
* * * * * *
17656554 AGCAAGTAGAGGGGGACCTGGCCAATCCTCGGCCTGTGCATCCCGCCCCTCTGGCCGACTGAGCG
772 AGCACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCG
* *
17656619 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCTGTCTAA
837 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
17656675 GCATACGAAGTTCATTCTCAGTCTAAGATTGGACCGGACCGAGGATTATGGCAGCACATGCTTGG
1 GCATACGAAGTTCATTC-CAGTCTAAGATCGGACCGGACCGAGGATTGTGGCAGCACATGCTGGG
*** * * * * *
17656740 CTCGGGCATGCATTGGTGCCGTATTTTTCTTCCCCGAGGCACCATCACCGGAGCATCGTCAGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * ** *
17656805 ACATGACCGACGATATTGGGGTTCCAACGATC-G-GGGAGGTGTGCGCACATGATGTGCGATGGG
130 ACCTGACCGGCGGCATTGGGGTTCCAACGATCGGCGGGGGGTGTGCGCACATGATGTGCGATGGG
* * *
17656868 TGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACATCGAGAACTCACACCCCCT
195 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCT
* * *
17656933 TAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAATGTGTCTAAAATGGGGACA
260 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* *
17656998 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTATGCATAC
325 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGC
* * * *
17657063 CAA-AGAAAACACAATGATCACATCTACCAAGTTTGGGCCCAAAACGCCTTCCGAAAAAATTTTA
390 CAACA-AAAATACAAGGATCACGTCTACCAAGTTTGGG-CCAAAACTCCTTCCGAAAAAATTTTA
* ** *
17657127 AAAAATCCCGAACTATAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
453 AAAAATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
17657192 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
518 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
** ** *
17657257 TGTAGAAATATGAAGATGTGATTAAACCCACCTACCACCCTATCGATCCACGGCTCGCACATCCC
583 CATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCC
* * * * * * *
17657322 GTCTTTCTAGCCGATGTAGTGCCCGCCCGCCTGCCCG-CACGCTTGTTTCGTCGGTTCGCTTAGG
648 ATCTCTCTGGCCGACGTAGT---CGCCCGCCCGCCCGTC-CGCTCGTTTCGTCGGTTGGCTTAGG
* * * * * * ** *
17657386 CATACGGAGTTCATTCATAGTCTAAGATCGGATCAGATTGAGGGTTGTGGTAGCCGGATCGACAA
709 CATACGGAGTTCATTCCTAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAAGATCGACAG
* **
17657451 CACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTTTGGCCGGTTGAGCGCC
774 CACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCC
* * *
17657516 CGCACGCTCGTTTCATGAGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
839 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
17657570 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGAACCTAGGATTGTGGCAGCACATGCTGGG
1 GCATACGAAGTTCATT-CCAGTCTAAGATCGGACCGGACCGAGGATTGTGGCAGCACATGCTGGG
*
17657635 CTCGGGCATGTGTTGGTGCCGCATTTTTCTT
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTT
17657666 TGCAGGCTGA
Statistics
Matches: 876, Mismatches: 103, Indels: 26
0.87 0.10 0.03
Matches are distributed among these distances:
889 1 0.00
890 177 0.20
891 280 0.32
892 1 0.00
894 1 0.00
895 277 0.32
896 2 0.00
897 136 0.16
898 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (892 bp):
GCATACGAAGTTCATTCCAGTCTAAGATCGGACCGGACCGAGGATTGTGGCAGCACATGCTGGGC
TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGTCGGAGAA
CCTGACCGGCGGCATTGGGGTTCCAACGATCGGCGGGGGGTGTGCGCACATGATGTGCGATGGGT
GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTT
AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCC
AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
AATCTCGAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAT
AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCATC
TCTCTGGCCGACGTAGTCGCCCGCCCGCCCGTCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
AGTTCATTCCTAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAAGATCGACAGCACGCAG
AGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGC
TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:17657574 original size:26 final size:26
Alignment explanation
Indices: 17657544--17657596 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17657534 GTTGACTTAG
17657544 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
17657570 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17657596 G
1 G
17657597 ATCGGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17657910 original size:26 final size:26
Alignment explanation
Indices: 17657880--17657932 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17657870 GTTGACTTAG
17657880 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17657906 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17657932 G
1 G
17657933 ATCGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17657961 original size:336 final size:339
Alignment explanation
Indices: 17657337--17658001 Score: 931
Period size: 336 Copynumber: 2.0 Consensus size: 339
17657327 TCTAGCCGAT
* * *
17657337 GTAGTGCCCGCCCGCCTGCCCGCACGCTTGTTTCGTCGGTTCGCTTAGGCATACGGAGTTCATTC
1 GTAGTGCCCGCCCGCCTGCCCGCAC-CTCGTTTCGTCGGTTAGCTTAGGCATACAGAGTTCATTC
* * ** * ** * * *
17657402 ATAGTCTAAGATCGGATCAGATTGAGGGTTGTGGTAGCCGGATCGACAACACGCAGAGGGGGACC
65 ACAGTCTAAGATCGAATCAGACCGAGGGTTGCGACAGCAGGATCGACAACACACAGAGGGGCACC
* * * ** * * *
17657467 CGGCCGATCCTCGGCTTGCGCATCCCGCCCCTTTGGCCGGTTGAGCGCCCGCACGCTCGTTTCAT
130 CAGCCGATCCCCGACTTGCGCATCCCGCCCCACTAGCCGGCTGAGCGCCCGCACGCTAGTTTCAT
17657532 GAGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAG
195 GAGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAG
* * * * *
17657597 ATCGGACCGAACCTAGGATTGTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTT
260 ATCGGACCGAACCGAGGATTGCGGCAGCACATGCTGGGCCCGGGCATGTGCTGGTGCCACATTTT
17657662 TCTTTGCAGGCTGAC
325 TCTTTGCAGGCTGAC
* *
17657677 GTAGTGCCCGCCCGCTTG-CC-CA-CTCGTTTCGTCGGTTAGCTTAGGCATACAGAGTTCATTCC
1 GTAGTGCCCGCCCGCCTGCCCGCACCTCGTTTCGTCGGTTAGCTTAGGCATACAGAGTTCATTCA
* ** * * *
17657739 CAGTCTAAGATCGAATCGGACCGAGGGTTGCGACAGCAGGATCGGTAGCACACAGAGTGGCACCT
66 CAGTCTAAGATCGAATCAGACCGAGGGTTGCGACAGCAGGATCGACAACACACAGAGGGGCACCC
* *
17657804 AGCCGATCCCCGACTTGCGCATCCCGCCCCACTAGCTGGCTGAGCGCCCGCACGTTAGTTTCATG
131 AGCCGATCCCCGACTTGCGCATCCCGCCCCACTAGCCGGCTGAGCGCCCGCACGCTAGTTTCATG
* *
17657869 GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA
196 AGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGA
* * *
17657934 TCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCCCGGGCATGTGCTGGTGCCACATTTTT
261 TCGGACCGAACCGAGGATTGCGGCAGCACATGCTGGGCCCGGGCATGTGCTGGTGCCACATTTTT
17657999 CTT
326 CTT
17658002 CGCCGGGGCA
Statistics
Matches: 284, Mismatches: 41, Indels: 4
0.86 0.12 0.01
Matches are distributed among these distances:
336 263 0.93
338 2 0.01
339 2 0.01
340 17 0.06
ACGTcount: A:0.19, C:0.29, G:0.29, T:0.24
Consensus pattern (339 bp):
GTAGTGCCCGCCCGCCTGCCCGCACCTCGTTTCGTCGGTTAGCTTAGGCATACAGAGTTCATTCA
CAGTCTAAGATCGAATCAGACCGAGGGTTGCGACAGCAGGATCGACAACACACAGAGGGGCACCC
AGCCGATCCCCGACTTGCGCATCCCGCCCCACTAGCCGGCTGAGCGCCCGCACGCTAGTTTCATG
AGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGA
TCGGACCGAACCGAGGATTGCGGCAGCACATGCTGGGCCCGGGCATGTGCTGGTGCCACATTTTT
CTTTGCAGGCTGAC
Found at i:17659622 original size:26 final size:26
Alignment explanation
Indices: 17659586--17659636 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
17659576 TGACTTAGGG
17659586 ATACGGAGTTCATTCCCAGTCTAAGC
1 ATACGGAGTTCATTCCCAGTCTAAGC
17659612 ATACGGAGTTCATTCCCAGTCTAAG
1 ATACGGAGTTCATTCCCAGTCTAAG
17659637 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.25, G:0.20, T:0.27
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAGTCTAAGC
Found at i:17659977 original size:852 final size:863
Alignment explanation
Indices: 17657839--17662079 Score: 4710
Period size: 890 Copynumber: 4.9 Consensus size: 863
17657829 GCCCCACTAG
* * *
17657839 CTGGCTGAGCGCCCGCACGTTAGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
1 CTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
*
17657904 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA-TCGGACCGAGGGTTGCGGCAGCACATGCT
66 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACT-AGACCGAGGGTTGCGGCAGCACATGCT
* * *
17657968 GGGCCCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCAT---C------C-CCGAA
130 GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGATCACCGGA
* * * * * *
17658023 GAACCTGACTGGCGGTATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGTGTG-CGCACATGATG
195 GAACCTGACCGACGGCATTAGGGTTCCAACGATCGGGGGGGCCGGGGGGTGTGTCGCACATGATG
**
17658087 TATGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
260 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
** *
17658152 ACACCCTTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
325 ACACCCCCTTGAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
17658217 ATGGGGACAGTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTT
390 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* * * * *
17658282 TTTTGCAT-CCTAACAAAAATACAAAGATCACGTCTA-CAAGGTTTGGGGCTAGAACTCC-TTCT
454 TTGTGCATGCC-AACAAAAATACAAGGATCATGTCTACCAA-GTTTGGGGCAAAAACTCCTTTC-
* * * *
17658344 GAAAAAATTTTAAAAAAT-CTCAGACCGCAGAACGTTTCAAAAATCATGAAAAATAAAAAACGAG
516 GAAAAAATTTTAAAAAATCCTGA-ACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
* *
17658408 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACCATTGTATGAATTTGCAAGCCATAAA
580 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
17658473 AATGTCATTGGC--GCATAGAAATATGAAGATGTGCCTAAGCCCACCTACCACCCTATTGATCCA
645 AATGGCATTGGCATGC--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
** * * * * * *
17658536 CAACTTGCGCATCCAC-TATCTCTGGCCAGTGTAGTGCCCACCCGCCCGCCCGCTCATTTTGTCG
708 CGGCTTGCGCAT-CACGTCTCTCTGGCCGGCGTAGT--------GCCTGCCCGCTCGTTTCGTCG
* ** * *
17658600 GTT-GCTTCAGGCATACGGAGTTCATTCTCAGTCTAAGATCAGATTAGACTGAGGGCTGCGGCAG
764 GTTGGCTT-AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG-T----TAG
** ** *
17658664 CAGGATCGGTAGCACATAGAGAAGGA-CCC-A-G-TTG-ATC-C-
823 CA-GATC---AGCATGTAGAGGGGGACCCCGACGCTCGCATCGCT
** * ** * * * ** *
17658702 CCAGCT-TGCGCATCCTGC-C-C-C---TC-T-GGCCGACTGAGCGC--CCGCAGGCTTGTTTTG
1 CTGGCTGAGCGC--CC-GCACGCTCGTTTCGTGGGTTGACTTAG-GCATACGGA-G-TT-CATTC
*** * * * * * *
17658756 TGGGTTGACTTAGGCATACGGAGTTCATACCTAGTCTAAGATCGGACTGGACTGAGGGTTACGGC
59 CCAG-T--C-TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGC
* * * * ** * *
17658821 AGCATACGCTGGGCTCAGGCAAGTGCTGGTGCCGTAATTTTCTTCGTCAGGGCACCATCG-C---
120 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGA
* *
17658882 --T----GGGGAACCTGACCGACGGCATTGGGGTTCCAACGATCGGGGGGGCCGGGGGGGTGTGT
185 GATCACCGGAGAACCTGACCGACGGCATTAGGGTTCCAACGATCGGGGGGGCC-GGGGGGTGTGT
*
17658941 -GCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
249 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
17659005 CTCGAGAACTCACACCCCCTTCG-AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
314 CTCGAGAACTCACACCCCCTT-GAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* *
17659069 AAAGTGTCTGAAATGGGGAAACTGTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
378 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
17659134 GCTGAATTTCTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAAA
443 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAAA
* * * * * *
17659199 CTCCTTTCGAAAAAAATTTAAAAAATCCTGAATCGCAAAAGGTTTCGAAAATCGTAAAAAATAGA
508 CTCCTTTCGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGA
* *
17659264 AAACGAGTCGTCTTGCCCTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTTCAAG
573 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
*
17659329 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATGG
638 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * *
17659394 ATCCACGGCTTGTGCATCACGTCTCTCTGGTCGGCGTAGTGCCTGCCTGCTCGTTTGGT-GGTTG
703 ATCCACGGCTTGCGCATCACGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCTCGTTTCGTCGGTTG
* *
17659458 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT-GC-GAT-AGTA
768 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTAGCAGATCAGCA
17659520 TGTAGAGGGGGA-CCC-A-GC-CG-AT-G-T
833 TGTAGAGGGGGACCCCGACGCTCGCATCGCT
* *
17659544 C-GGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGGATACGGAGTTCATTCCCAGTCT
1 CTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
* * * *
17659608 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTACGACAGCACATGCTG
66 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTG
*
17659673 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGTATCACCGGA
131 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAG-ATCACCGGA
* * * *
17659738 GAACCTAATCGACGGCATTAAGGTTCCAATGATC-GGGGGGCCGGGGGGTGTGTCCGCACATGAT
195 GAACCTGACCGACGGCATTAGGGTTCCAACGATCGGGGGGGCCGGGGGGTGTGT-CGCACATGAT
*
17659802 GTGCGATGGGTGCTGGTACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
259 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
17659867 CACACCCCCTTGAAGAGCATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTTTTTGA
324 CACACCCCCTTGAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17659932 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTGCACTTCGAGTTTTTAGCTGATTTTTT
389 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * *
17659997 TTGTGCATGCTAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAATA-TTCTTCCG-
454 TTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAA-ACTCCTTTCGA
* **
17660060 AAAAATTTTAAAAAATCCTGAACCACAAAAAGTTTTGAAAATCGA-GAAAAATAGAAAACGAGTC
518 AAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATC-ATGAAAAATAGAAAACGAGTC
*
17660124 GTTTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
582 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* * * *
17660189 TGGTATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACTACCCTATCGATCTAAGGC
647 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * * ** *
17660254 TTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCCG-CCCGTCGGTTGGCTTAGGTA
712 TTGCGCATCACGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
17660318 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGACAGCTAGATCGACAGCA
777 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT-----AGC-AGAT---CAGCA
17660383 TGTAGAGGGGGACCCGACCGATCTCGGGCTTGCGCATCCCGCCCCTCT
833 TGTAGAGGGGGA-CC--CCGA---C--GC-T-CGCAT--CG-----CT
*
17660431 AGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTCACTTAGGCATACGGAGTTCATTCCCAGT
1 --CTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * *
17660496 CTAAGCATACGGGGTGCATTCCCAGTCTAAGATCAGACTAGACCGAGGGTTGTGGCAGCACATGC
64 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGC
* * * * * * * * *
17660561 TGGGCTCGAGCATGTGCTGGCGTCAAATTTTACTTCGTCAGGGCACCATCGTCGGAGCATCGCTG
129 TGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAG-ATCACCG
* * ** **
17660626 GAGAACCTGACCGACTGCATTAGGGTTTCGGCGATCAAGGGGGCCGGGGGG-GTGTGCGCACATG
193 GAGAACCTGACCGACGGCATTAGGGTTCCAACGATCGGGGGGGCCGGGGGGTGTGT-CGCACATG
*
17660690 ATGTGCGATGGGTGCTGGTCCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
257 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
* * *
17660755 CTCACACCCTCTTAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
322 CTCACACCCCCTTGAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
*
17660820 GAAATAGGGG-CACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
387 GAAAT-GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * *
17660884 TTTTTGTGCAT-CCAACAAAAATAAAAGGATCATGTCTACCAAGTTTGGGACAAAACCTCCTTCC
451 TTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAAACTCCTTTC
* * *
17660948 AAAAAAATTTTAAAAAAT-CTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATTGAAAACGAG
516 GAAAAAATTTTAAAAAATCCT-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
17661012 TCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
580 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
17661077 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
645 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * *
17661142 GCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCACCTGCCTGCCCGCCCGCCCACCCGCTT
710 GCTTGCGCATCACGTCTCTCTGGCCGGCGTA--G------TGCCT--------G----CCCGCTC
* **
17661207 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGATTGAGGGT
755 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG-
*
17661272 TATGGCAGCAGGATCAACAGCACGTAGAGGGGGACCCAACTGATCCCCGACTTGCGCATCCGGCC
819 T-T---AGCA-GAT---CAGCATGTAGAGGGGGACCC--C-GA----CG-C-T-CGCAT-C-G--
17661337 CCT
862 -CT
*
17661340 CTGGCCAACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTAATTCCCA
1 CTGG----CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * *
17661405 GTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGACTAGACCGAGGGTTGTGGCAGCACAT
62 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACAT
* * * * *
17661470 GCTGGGCTTGGGCATGTGCTGGTGCCACATTTTTCTTC-ACTGGGGCACCATCGTCGGAGCAACG
127 GCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTC-GGGGCACCATCGCCGGAG-ATCA
* * * ** * *
17661534 TCGAAGAACCTGACCGACAGCATT-GGTGTTCCAGTGATCGAGGGGACCGGGGGGTGTG-CGCAC
190 CCGGAGAACCTGACCGACGGCATTAGG-GTTCCAACGATCGGGGGGGCCGGGGGGTGTGTCGCAC
** * *
17661597 ATGATGTGCGATGGGTTTTGTTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGA
254 ATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA
* *
17661662 GAACTCACACCCCC-TGAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGT
319 GAACTCACACCCCCTTG-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
*
17661726 GTCTG--A-----A-A------T----T-GTCACAAAATCTTGTACACTTCGAGTTTTTAGGTGA
383 GTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * *
17661772 ATTTTTTTGTGCATGCCAATAAAAGTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
448 ATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAAACTCCT
* * * *
17661837 TCCGATAAAATTTTAAAAAATCCCGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
513 TTCGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
* *
17661902 AGTCGTCTTGCCACGAAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATA
578 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * *
17661967 AAAATGGCTTTGGCATGCAGAAATATGAAGATGTGCCCAAACCCACCTACCACCCTATCGATACA
643 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * *
17662032 CAGCTTGCGCATCCCATCTTTCTGGCCGACGTAGTGCCTGCCCACTCG
708 CGGCTTGCGCATCACGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCTCG
17662080 CCCGCCCAGC
Statistics
Matches: 2931, Mismatches: 304, Indels: 277
0.83 0.09 0.08
Matches are distributed among these distances:
839 2 0.00
840 3 0.00
841 104 0.04
842 26 0.01
844 1 0.00
845 5 0.00
846 7 0.00
847 9 0.00
848 6 0.00
850 13 0.00
851 280 0.10
852 281 0.10
853 2 0.00
854 46 0.02
855 19 0.01
856 3 0.00
857 11 0.00
858 5 0.00
859 8 0.00
860 1 0.00
862 8 0.00
863 397 0.14
864 215 0.07
865 6 0.00
867 2 0.00
868 1 0.00
872 6 0.00
874 2 0.00
876 1 0.00
877 2 0.00
878 2 0.00
881 1 0.00
884 5 0.00
887 1 0.00
889 51 0.02
890 604 0.21
891 65 0.02
892 256 0.09
893 1 0.00
896 1 0.00
898 4 0.00
902 1 0.00
906 1 0.00
907 4 0.00
908 2 0.00
909 5 0.00
910 142 0.05
911 306 0.10
912 6 0.00
913 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (863 bp):
CTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTAGACCGAGGGTTGCGGCAGCACATGCTG
GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGCCGGAGATCACCGGAG
AACCTGACCGACGGCATTAGGGTTCCAACGATCGGGGGGGCCGGGGGGTGTGTCGCACATGATGT
GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
CACCCCCTTGAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
GTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCAAAAACTCCTTTCGAAAA
AATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
GCATCACGTCTCTCTGGCCGGCGTAGTGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTAGCAGATCAGCATGTAGAGGGGGAC
CCCGACGCTCGCATCGCT
Found at i:17660515 original size:26 final size:26
Alignment explanation
Indices: 17660474--17660526 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17660464 GTTCACTTAG
*
17660474 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTGCATTCCCAGTCTAA
*
17660500 GCATACGGGGTGCATTCCCAGTCTAA
1 GCATACGGAGTGCATTCCCAGTCTAA
17660526 G
1 G
17660527 ATCAGACTAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.26, G:0.25, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTGCATTCCCAGTCTAA
Found at i:17661421 original size:26 final size:26
Alignment explanation
Indices: 17661385--17661437 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17661375 GTTGACTTAG
17661385 GCATACGGAGTTAATTCCCAGTCTAA
1 GCATACGGAGTTAATTCCCAGTCTAA
* *
17661411 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTAATTCCCAGTCTAA
17661437 G
1 G
17661438 ATCAGACTAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTAATTCCCAGTCTAA
Found at i:17663040 original size:26 final size:26
Alignment explanation
Indices: 17663010--17663062 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17663000 GTTGACTTAG
17663010 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
* *
17663036 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17663062 G
1 G
17663063 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17664829 original size:868 final size:865
Alignment explanation
Indices: 17662140--17666311 Score: 4695
Period size: 868 Copynumber: 4.8 Consensus size: 865
17662130 GCCAGTCTAA
** * ** * *
17662140 GCATACGAAGTTCATTCCCAGTCTAAGATTAGACCGGACTAAGGGTTACAGCAGCACATGCTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGTGTTGCAGCAGCACATGCTGGG
* * * * * *
17662205 CTC-AGGCATGTACTGGTGCCGTATTTTTCTTCGCCGGGGTACCATCGCCGAAGCTTCATCGGAG
66 CTCGA-GCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGTCGGAG
* * * * *
17662269 AACCTGACCGACGGCATTGAGGTTCCGATGATCGGATGGTCGGGGGGTGTGTGCACATGATGTGC
130 AACCTGACCGGCGGCATTGGGGTTTCG--G--C-GATCG--GGGGGGTGTGCGCACATGATGTGC
* * *
17662334 GATGGGTGCTTGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCCAACCTTAAGAACTCACA
188 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
17662399 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
253 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * * * *
17662464 GGGACACTTTTTTCAAATGGTCGCAAAATCTTGTACACTTCAATTTTTTAGTTGAATGTTTTTAT
318 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
17662529 GCATGCCAACAAGAATACAAGG-TCACGTCTAATAAGTTTGGGGCCAAAACTCTTTCCGAAAAAA
383 GCATGCCAACAAGAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACTCTTTCCGAAAAAA
* * * * *
17662593 TTTAAAAAAATCCCAAACCGTAAGAAGTTTTGAAAATCGTTAAAAATAGAAAACGAGTCATCTTG
448 TTTTAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTG
* *
17662658 CCATGAAACTTCAC-TCAAGGCTTAAGGGACCATTGTATGAATTTACAAGGCATAAAAACGGCAT
513 CCATGAAACTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * * * *
17662722 TCGCACATAGAAATATGAATATATCCCTAAACCCACCTACCACCATATCGATCCACGGCTTACGT
578 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTGCGC
* * *
17662787 ATCCTGTCTCTCTAGCCGGA-GTAGTGCCCGCCCACCCGCCCGCTCGTTTCGTCAGTTGGCTTAG
643 ATCCCGTCTCTCT-GGCTGACGTAGTGCCCGCCCACCCGCCCGCTCGTTTCGTCAGTTGGCTTAG
* ** * * *
17662851 GCATACAGAGTTCATTCCCAGTCTAAGATTGGACCAGACTGAGGGTTGCGGCAGCAGGATCGGTA
707 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCAGGATCGGCA
* * * * *
17662916 GCACGTAGAGGGGGACCCGACCGATCCCCA-ACTTACGCATCCTGCCCCTCTGGCCGACAGAGCC
772 GCACGCAGAGGGGGACCCGACCGAT-CCCAGACTTACACATCCCGCCCCTCTGGCCGACTGAGCG
* *
17662980 CCCGCACACTCATTTCATGGGTTGACTTAG
836 CCCGCACGCTCGTTTCATGGGTTGACTTAG
*
17663010 GCATACGAAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGATCGGAC
1 GCATACGAAGTTCATTCCCAGTCTAAG---ATCG-G---A----C---C--AGA-C----C-GA-
* ** * * * *
17663075 CGAGGTTTGTGGCAGCACATGCTAGGCTCGGGCATGTGCTGGCGCCGTATTTTTCTTCACCGGGG
43 -G-TG-TTGCAGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGG
* * * * **
17663140 CACCATCGTTGGAGCATCGTCGGAGAACCTGACTGGCGACATTAGGG-TTCTGATGATCGGGGGG
105 CACCATCGTCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTTC-GGCGATC-----G
* *
17663204 GGCCAGGGGTGGTGTACGCACATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCC
164 GG---GGGGT-GTG--CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
17663269 CTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTGGAGATTTTACAAGTTTG
223 CTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
*
17663334 CTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
288 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
** * *
17663399 CACTTCGAGTTTTTAGCAAAATTTTTTTGTGCATGCCAACAAGAATACAGGGATCACGTCTAATA
353 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAGAATACAAGGATCACGTCTAACA
* * * * *
17663464 AGTTTGGGGCCAAAGCAC-CTTT-TGAAAAAATTTTAAAAAATCTCGAACCGTAAAAGGTTTTGA
418 AGTTTGGGGCCAAA--ACTCTTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTTGA
* *
17663527 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTCAAGGCTTAAGGGACCA
481 AAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTCAAGGCTTAAGGGACCA
*
17663592 TTGTATGAATTTACAAGCCATAAAAATGGCCTTGGCACGTAGAAATATGAAGATGTGCCTAAACC
546 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACC
* * * *
17663657 CACCTACCACCCTATTGATCCACGGTTTGCGCATCCCGTCTCTCTGGCTGGCGTAGTGCTCGCCC
611 CACCTACCACCATATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCTGACGTA--G-T-GCCC
* * * *
17663722 ACCCACCCGCCCGTTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
672 GCCCACCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * * *
17663787 AGACCGGACCGAGGGTTACGACAGCAGGATCGGCAGCACGCGGAGGGGGACCCGGCCTATCCCCG
737 AGACCAGACCGAGGGTTGCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCAG
* * ** * **
17663852 ACTTACGCATCCCGCCCCTCTGGTCGGTTGAGCGCCCGCACTCTCGTTTGGTGGGTTGACTTAG
802 ACTTACACATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* * * *
17663916 GCATACGGAGTTCATTCCCTGTCTAAGATCGGACCAAACCGAGTGTTGCAGCAGCACATGTTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGTGTTGCAGCAGCACATGCTGGG
* * *
17663981 CTCGAGCATGTGCTGGTGCTGTAATTTTCTTCGTC-GGGCACCATCGTCGGAGCATCGTCGGAGA
66 CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGTCGGAGA
*
17664045 ACCTGACCGGCGGCATTGGGGTTTCGGCGATCGGGGGGGTGTGCGCACATGATGTGCAATGGGTG
131 ACCTGACCGGCGGCATTGGGGTTTCGGCGATCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
17664110 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCCAACCTTGAGAACTCACACCCCCTTA
196 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTA
*
17664175 AAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
261 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
*
17664240 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGATTTTTTAGCTGAATTTTTTTGTGCATGCCA
326 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * *
17664305 ACAAGAATACAAGGATCACCTCTAACAAGTTTCGGGCCAAAACTCTTTCCAAAAAAATTTTAAAA
391 ACAAGAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACTCTTTCCGAAAAAATTTTAAAA
* * *
17664370 AATCCCAAACCGCAAAAAGTTTTGAAAATCTTTAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
456 AATCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAA
* * *
17664435 CTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTAGAAGGCATAAAAATGGCATTGGCATGT
521 CTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGT
* * *
17664500 AGAAATATAAAGATGTGCCTAAACCCACCTACCACCATATTGATCCACGGCTTGCGCATCTCGTC
586 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTGCGCATCCCGTC
* * * *
17664565 TCTCTGGCTGATGTAGTGCCCGCCTGCCTGCCCGCCCGATCGTTTCGCCAGTTGGCTTAGGCATA
651 TCTCTGGCTGACGTAGTGCCCG-C--CC-ACCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATA
** * * **
17664630 CGGAGTTCATTCCTTGTCTAAGATCAGATCGGACCG-GAGGTTGCGGTAGCAGGATCGGCAGCAC
712 CGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAG-GGTTGCGACAGCAGGATCGGCAGCAC
* * * * *
17664694 GTAGAGGGGGACCCGATCGATCCAAGACTTGCACATCCCGCCCCTCTGGCCGACTGAGCACCCGC
776 GCAGAGGGGGACCCGACCGATCCCAGACTTACACATCCCGCCCCTCTGGCCGACTGAGCGCCCGC
* *
17664759 ATGCTCGTTTCATGGGTCGACTTAG
841 ACGCTCGTTTCATGGGTTGACTTAG
* * *
17664784 GCATATGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGTGTTGCGGCACCACATGCTGGG
1 GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGTGTTGCAGCAGCACATGCTGGG
* * * * * * * * * * *
17664849 CTTGGGCATGTCCTAGTGTCGCATTTTTCTTCGTCGGAGAACC-T-GACCGACGACAT--T-GG-
66 CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGTCGGA-G-CATCGTCGGA
* * * * *
17664908 G---GT-TCCGAC-G-ATCGGGAG----GGC---C-GGGGGGTGTGCGCACATGATGTGCAATGG
129 GAACCTGACCGGCGGCATTGGG-GTTTCGGCGATCGGGGGGGTGTGCGCACATGATGTGCGATGG
* * * * *
17664959 GTGGTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAATCTTGAGAACTCATA-ACCC
193 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCC
* ** * *
17665023 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTTGTTACTAAAGTGTCTGAAATGGGGGC
258 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
* * *
17665088 ACTTTTTTCGAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTATTGTGCATG
323 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * * *
17665153 CCAACAAAAATACAAGGATCACGTCTACCATGTTTGGGGGCAAAACTCCTTT-CGAAAAAATTTT
388 CCAACAAGAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACT-CTTTCCGAAAAAATTTT
* * **
17665217 AAAAAATCCCGAACCGCAAAATGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCAT
452 AAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCAT
* *
17665282 GAAACTTCACGTGAAGG-TTAAGGGACCATTGTATGAATTTACGAGCCATAAAAATGGCATTGGC
517 GAAACTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
** * * * * *
17665346 ACACATAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCTCGGCTTACGCATCC
582 ACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTGCGCATCC
* * * * * *
17665411 CATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTTGTCGGTTGGCTTAGGCATA
647 CGTCTCTCTGGCTGACGTAGTGCCCGCCCACCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATA
* * * * * * *
17665476 TGGAGTTCATTCCCAGTCTAAAATCAGACCAGATCAAGGGTTGTGACAGTAGGATCGACAGCACG
712 CGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCAGGATCGGCAGCACG
* * * * *
17665541 CAGAGGGGGACCTGATCGATCCCCGACTTACACATCCCGCACCTCTAGCCGACTGAGCGCCCGCA
777 CAGAGGGGGACCCGACCGATCCCAGACTTACACATCCCGCCCCTCTGGCCGACTGAGCGCCCGCA
* *
17665606 CGCTTGTTTCGTGGGTTGACTTAG
842 CGCTCGTTTCATGGGTTGACTTAG
* * ** * * *
17665630 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTC-AGTCTAAGATTGGA-CCGG
1 GCATACGAAGTTCATTCCCAGTCTAAG-AT-CGGA--CCAGAC-CGAG--T--G-TTGCAGCAGC
* * ** * * * * ******
17665693 ACCGAGGGTTGTGG-T--AGCACATGCTGGAAT-CGGGTATGTATCGAT-GCCACATTTTTCC-T
56 A-C-A-TGCTG-GGCTCGAGCATGTGCTGG--TGC-CGTATTTTTC-TTCG-C-CGGGGCACCAT
* * * * * * **
17665752 CGTCGGGGCACCGTCGTCGGACAACCTTACCAGCGGCATTAGGGTTCCAGCAATCGAGGGGGCCG
111 CGTCGGAGCA---TCGTCGGAGAACCTGACCGGCGGCATTGGGGTT-------TC--GGCGATCG
*
17665817 GGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
164 GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCC
* * * * * *
17665882 CTCATCAAACCTTGAGAACTCACACCCGCTTAAAAAGCATGTGAGATTTTATAGGTTTGTTGCTA
229 CTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCA
17665947 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
294 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC
* * * * * *
17666012 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATGATGTCTACCAAGTTTT
359 GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAGAATACAAGGATCACGTCTAACAAGTTTG
* * * * **
17666077 GGGCCAAAACTCCTTCCGAAAAAAGTTTAAAAAATCACAAACCACAAAAAGTTTCAAAAATCATG
424 GGGCCAAAACTCTTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCATG
* * * *
17666142 AAAAATAGAAAACGAGTCATCCTGCCATGAAACCTCACGTGC-AGGTTTAAGGGACCATTGTATC
489 AAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGT-CAAGGCTTAAGGGACCATTGTATG
* * *
17666206 AAGTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
553 AATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTAC
*
17666271 CACTC-TATCGATCCACGGCTTGCGCATCCCATCTCTCTGGC
618 CAC-CATATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
17666312 CAGTCTAAGA
Statistics
Matches: 2814, Mismatches: 369, Indels: 219
0.83 0.11 0.06
Matches are distributed among these distances:
846 184 0.07
847 5 0.00
848 4 0.00
849 1 0.00
850 125 0.04
851 250 0.09
852 89 0.03
853 1 0.00
854 3 0.00
855 11 0.00
856 4 0.00
857 12 0.00
858 5 0.00
859 10 0.00
860 5 0.00
861 5 0.00
862 1 0.00
863 1 0.00
864 6 0.00
865 3 0.00
866 5 0.00
867 12 0.00
868 698 0.25
869 11 0.00
870 32 0.01
871 9 0.00
873 2 0.00
874 4 0.00
877 1 0.00
879 51 0.02
880 48 0.02
881 2 0.00
882 1 0.00
883 2 0.00
884 3 0.00
885 1 0.00
886 3 0.00
887 87 0.03
888 245 0.09
889 114 0.04
890 3 0.00
891 3 0.00
892 2 0.00
894 3 0.00
895 5 0.00
896 88 0.03
897 5 0.00
898 3 0.00
899 1 0.00
900 213 0.08
901 108 0.04
902 122 0.04
903 5 0.00
904 1 0.00
905 4 0.00
906 192 0.07
ACGTcount: A:0.26, C:0.24, G:0.23, T:0.26
Consensus pattern (865 bp):
GCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGTGTTGCAGCAGCACATGCTGGG
CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGTCGGAGA
ACCTGACCGGCGGCATTGGGGTTTCGGCGATCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTA
AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
ACAAGAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACTCTTTCCGAAAAAATTTTAAAA
AATCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAA
CTTCACGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGT
AGAAATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACGGCTTGCGCATCCCGTC
TCTCTGGCTGACGTAGTGCCCGCCCACCCGCCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGA
GTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGACAGCAGGATCGGCAGCACGCAGA
GGGGGACCCGACCGATCCCAGACTTACACATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCT
CGTTTCATGGGTTGACTTAG
Found at i:17665666 original size:26 final size:26
Alignment explanation
Indices: 17665630--17665682 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17665620 GTTGACTTAG
17665630 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17665656 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17665682 G
1 G
17665683 ATTGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17667082 original size:832 final size:828
Alignment explanation
Indices: 17665512--17668041 Score: 2585
Period size: 832 Copynumber: 3.0 Consensus size: 828
17665502 GACCAGATCA
* * * * * **
17665512 AGGGTTGTGACAGTAGGATCGACAGCACGCAGAGGGGGACCTGATCGATCCCCGACTTACACATC
1 AGGGTTGTGACAGCAGGATCGATAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTATGCATC
* * * * *
17665577 CCGCACCTCTAGCCGACTGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTT
66 CCTCACCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACTGAGTT
* * * *
17665642 CATTCCCAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATTGGACCGGACCGAGGGTTGTGG
131 CATTCCCAGTCGAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * * * * *
17665707 TAGCACATGCTGGAATCGGGTATGT-ATCGATGCCACATTTTTCCTCGTCGGGGCACCGTC---G
196 CAGCACATGCTGGACTCGGGCATGTGCT-GGTGCCACATTTTTCTTCGT-GGGGCACCATCGGAG
* * * *
17665768 --T---CGGACAACCTTACC-AGCGGCATTAGGGTTCCAGCAATCGAGGGGGCCGGGGGG-GTGT
259 CATCACCGAAGAACCTTACCGA-CGGCATT-GGGTTCCGGCAATC-AGGGGGCCGGGGGGTGTGC
17665826 ACGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
321 AC-C-CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * * * * *
17665891 CCTTGAGAACTCACACCCGCTTAAAAAGCATGTGAGATTTTATAGGTTTGTTGCTAGTAGCCATT
384 CCTCGAGAACTCACACCC-CTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
17665956 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
448 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* *
17666021 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATGATGTCTACCAAGTTTTGGGCCAAAA
513 GCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAA
* *
17666086 CTCCTTCCGAAAAAAGTTTAAAAAATCACAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGA
578 CTTCTTCCGAAAAAAGTTTAAAAAATCACGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGA
* * ** * * * * *
17666151 AAACGAGTCATCCTGCCATGAAACCTCACGTGCAGGTTTAAGGGACCATTGTATCAAGTTACAAG
643 AAACGTGTCTTATTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
*
17666216 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCTATCG
708 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * *
17666281 ATCCACGGCTTGCGCATCCCATCTCTCTGGCCAG-TCTAAGATG-GGACCG-GAC-CG
773 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGATCT-AG-TGCCGACCGCCACTCG
*
17666335 AGGGTTGTGGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTATGCATC
1 AGGGTTGTGACAGCAGGATCGATAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTATGCATC
* *
17666400 CCTCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACTGAGTT
66 CCTCACCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACTGAGTT
* * *
17666465 CATTCCCAGTCGAAGCATACGTAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTACGG
131 CATTCCCAGTCGAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
* * * *
17666530 CAGCACATGCTGGGCTTGGGCATGTGCTGGTGCCGCATTGTTCTTCGCTGGGGCACCATAACCGG
196 CAGCACATGCTGGACTCGGGCATGTGCTGGTGCCACATTTTTCTTCG-TGGGGCACCAT---CGG
* * *
17666595 AGCATCACCGAAGAACATTACCGACGGCATTGGGGTTCCGGCTATCAGGGGGTCGGGGGGTGTGC
257 AGCATCACCGAAGAACCTTACCGACGGCATT-GGGTTCCGGCAATCAGGGGGCCGGGGGGTGTGC
* **
17666660 ACCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATGTTGGCCCCCTATCTTTCATCAAACC
321 ACCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
*
17666725 TCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATTAA
386 TCGAGAACTCACACCCC-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAA
* * *
17666790 AGTGTCTGAAATGGGGACAGTTTTTTCGAATGGTCACAAAATTTTGTACACTTCGAGTTTTTAGC
450 AGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC
* * ** * * *
17666855 TGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACATCTAGCAAGTCTGGGGGCAAAACT
515 TGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACT
* *
17666920 TCTTCCGAAAAAAGTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAA
580 TCTTCCGAAAAAAGTTTAAAAAATCACGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAA
*
17666985 ACGTGTCTTATTGCCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
645 ACGTGTCTTATTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
* *
17667050 ATAAAAATGGAATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATAGAT
710 ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * * * * *
17667115 CCACGGCTCGCACATCACGTCTCTCTGACC-GATGTAGTGCCCGCCCGCCCACTCG
775 CCACGGCTTGCGCATCCCGTCTCTCTGGCCAGATCTAGTG-CCGACCG-CCACTCG
** * ** * * ***** * * * *
17667170 CTCGTTTCGTCGATTGGCTTAGGCATACAGAGT-TCATTCCCAGTCTAAGATCGGACAGCAT-CG
1 -AGGGTT-GT-GA-CAGC--AGG-AT-C-GA-TAGCA--CGCAGAGGGGGACCCGACCG-ATCCC
* * ** * ** ** *
17667233 AGGGTTACGGTAGCAGGATCTGT-AGCATGAAGAGGGGGACTCG-GCCGATCCCCGGCTTGCGCA
53 CGGCTTA---T-GC---ATCCCTCA-CCT-CTG-GCCGG-CT-GAG-CG---CCC-GC--ACGC-
* * * * **** ** *
17667296 TCCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCG-TTTCATGGGTTGACTTAGGCATACGGA
98 T--CG----TTTCGTGGGTTGA-CTTAGGCATACT-GAGTTCA----TT--C-----C---C--A
* ***
17667360 GTTCATTCCCAGTTTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGTGTGAGGGTTG
139 G-----T--C-G---AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG
* * * * *
17667425 CGACAGAACATACTAGCCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTTGGGGCACCATCGT
193 CGGCAGCACATGCTGGACTCGGGCATGTGCTGGTGCCACATTTTTCTTCG-TGGGGCACCA---T
* * * * * * * *
17667490 CGGAGCATCACCGAAGAACCTGACGGGCGACGTT--GTTCTGGCGATCGGGGGGCCGGGGGGGTG
254 CGGAGCATCACCGAAGAACCTTACCGACGGCATTGGGTTCCGGCAATCAGGGGGCC-GGGGGGTG
* * * *
17667553 TGCACACATGATGTGTGATGGGTGCTGCTACTTGGCCCTTATATTGGCCCGCTATCCCTCATCAA
318 TGCACCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
*
17667618 ACCTCGAGAATTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
383 ACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
17667683 TAAAGTGTCCGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
447 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* *
17667748 ATCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAGGTTTGGGGCCAAA
512 AGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAA
* * **
17667813 AC-TCATTCC-AAAAAAGTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATA
577 ACTTC-TTCCGAAAAAAGTTTAAAAAATCACGAACCACAAAAAGTTTCAAAAATCATGAAAAATA
* * * *
17667876 GAAAAC-TAGT-TGTTTTGCCATGAAACTTCATGTGAAAGCTTAAGGGACCATTTTATGAATTTA
641 GAAAACGT-GTCT-TATTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
*
17667939 CAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
704 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
17668004 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG
769 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG
17668042 CATAGTGCCC
Statistics
Matches: 1415, Mismatches: 193, Indels: 125
0.82 0.11 0.07
Matches are distributed among these distances:
823 217 0.15
824 2 0.00
826 1 0.00
829 1 0.00
830 2 0.00
831 5 0.00
832 442 0.31
833 14 0.01
834 37 0.03
835 3 0.00
836 3 0.00
837 2 0.00
838 1 0.00
839 2 0.00
841 3 0.00
842 2 0.00
843 1 0.00
844 4 0.00
845 1 0.00
846 17 0.01
847 2 0.00
849 1 0.00
850 2 0.00
853 6 0.00
854 1 0.00
855 3 0.00
856 3 0.00
857 3 0.00
860 3 0.00
861 2 0.00
863 3 0.00
864 1 0.00
866 2 0.00
870 9 0.01
871 10 0.01
872 1 0.00
875 2 0.00
877 1 0.00
882 1 0.00
885 1 0.00
887 2 0.00
892 1 0.00
894 3 0.00
895 216 0.15
896 248 0.18
897 4 0.00
898 123 0.09
901 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (828 bp):
AGGGTTGTGACAGCAGGATCGATAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTATGCATC
CCTCACCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACTGAGTT
CATTCCCAGTCGAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG
CAGCACATGCTGGACTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTGGGGCACCATCGGAGCA
TCACCGAAGAACCTTACCGACGGCATTGGGTTCCGGCAATCAGGGGGCCGGGGGGTGTGCACCCA
TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG
AACTCACACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
TTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTTCTTCC
GAAAAAAGTTTAAAAAATCACGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGTGT
CTTATTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
CTTGCGCATCCCGTCTCTCTGGCCAGATCTAGTGCCGACCGCCACTCG
Found at i:17667381 original size:26 final size:26
Alignment explanation
Indices: 17667351--17667403 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17667341 GTTGACTTAG
*
17667351 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17667377 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17667403 G
1 G
17667404 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17669559 original size:26 final size:26
Alignment explanation
Indices: 17669523--17669575 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
17669513 GTTGACTTAG
17669523 GCATACAGAGTTCA-TTCTCAGTCTAA
1 GCATACAGAGTTCATTTC-CAGTCTAA
17669549 GCATACAGAGTTCATTTCCAGTCTAA
1 GCATACAGAGTTCATTTCCAGTCTAA
17669575 G
1 G
17669576 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 23 0.88
27 3 0.12
ACGTcount: A:0.30, C:0.23, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTTCCAGTCTAA
Found at i:17670454 original size:26 final size:26
Alignment explanation
Indices: 17670425--17670477 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17670415 GTTGACTGAG
*
17670425 GCATACAAAGTTCATTCCCAGTTTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
**
17670451 GCATACGTAGTTCATTCCCAGTCTAA
1 GCATACAAAGTTCATTCCCAGTCTAA
17670477 G
1 G
17670478 ATCGGATCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.15, T:0.30
Consensus pattern (26 bp):
GCATACAAAGTTCATTCCCAGTCTAA
Found at i:17670784 original size:902 final size:900
Alignment explanation
Indices: 17668154--17677564 Score: 6888
Period size: 876 Copynumber: 10.4 Consensus size: 900
17668144 GTAGGATCAC
** * **
17668154 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATGGCATCTACCAAGTTTGATGCCAAAACTCCT
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* *
17668219 TTCGAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGCTTTC-AAAATCGTGAAAAATAGAAAAC
66 TTCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAAC
* * * *
17668283 AAGTCGTCTTGCCAGGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCAT
130 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
17668348 AAAAATGGCATTGGCACATAGAAATAT-AAGGATGTGCCTAAACCCACCTGCCACCCCATCGATC
195 AAAAATGGCATTGGCACATAGAAATATGAA-GATGTGCCTAAACCCACCTACCACCCTATCGATC
* * *
17668412 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCTCGCC-C-GCTCGTTTCG
259 CACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCA
* * *
17668475 TCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACGGAGGGTTGCGGT
324 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGT
* *
17668540 AGC-AGTATCGGCAGCACACAGAGGGGGACCTGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCT
389 AGCAAG-ATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCT
* * *
17668604 GGCCTGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCTGT
453 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * * *
17668669 GTAAGCATACTGAGTTCATTCCTAGTCCAAGATCGGACCGGACCGGGGGTTACAGCAGCACATGT
518 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGC
* * * * * **
17668734 TGGGCTTGAGCATGTGCTGGTGTCGTATTTTTCTTCACCGGGGCACCAACGTCAGAGCATTATCG
583 TGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCG
** * * * **
17668799 GAGAACCCGACCGGCAGCGTTGGGGTTCCGACGATTGGGGGGGCCGGGGGGTGTGCGCACATGAT
648 GAGAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGAT
17668864 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA-T
713 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
17668928 ---A-------AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
778 CACACCCCCTTAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
17668983 ATGGGGATACTTTTTTCAAATGGTCACAAAATCTTGCACACTTTCGAGTTTTTAGCTGA
843 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGA
* *
17669042 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACCTCTACCAGGTTTGGGGCCAAAACTCCT
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * **** *
17669107 TCCGAAAAAATTTCAAAAGATTTTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
66 TTCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* * * **
17669172 AGTCGTCTTGCCATGAAACTTCACGCGAAGGCTTGAGGGACCATTGTATGAATTTGCAAGAAATA
131 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* * *
17669237 AAAATGGCATTGGCACACAAAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
196 AAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * * *
17669302 TGGCTTACGCATCCCGGCTCTCTGGCCGGCGCAGTGCCCGCCTGCCCG--GCTGCTCGTTTCGTC
261 CGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCATC
* * *
17669365 GGTTGGCTTAGGCATACGGAGTTCATTCTCAGTCTAAGATCAGACCGGACCG-A----G-GGTTG
326 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGTAG
* ** * * * * *
17669424 C---A---GCAGCACGCAAAGGGGGATGCGG-CTGAGCTCTGGCTTGCGCATCCTGCTCCTATGG
391 CAAGATCGGCAGCACGCAGAGGGGGACCCGGTC-GATCCCTGGCTTGCGCATCCCGCCCCTCTGG
* * * * *
17669482 CCGG-TCGAGCGCCCGCACGTTCGTTTTGTGTGTTGACTTAGGCATACAGAGTTCATTCTCAGTC
455 CCGGCT-GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
17669546 TAAGCATACAGAGTTCATTTCCAGTCTAAGATCAGACCAGG-CCGAGGGTTGCGGCAGCACATGC
519 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC-GGACCGAGGGTTGCGGCAGCACATGC
* * ** * * * *
17669610 TGGGCTCGGGCATGTGCTGGTGCCATATTTTTCTTCACCGGGTTACCTTTGTCAGAGCATCGCCA
583 TGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCG
* *
17669675 GAGAACTTGACCGGTGACATTGGGGTTCCGGCGATC-GGGGGGCCGGGAGGGTGTGCGCACATGA
648 GAGAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCCGGG-GGGTGTGCGCACATGA
* *
17669739 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCGTCATCAAACCTCAAGAAC
712 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
17669804 TCACACCCCCTTATAGAGCATTTGAGATTTTATAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTG
777 TCACACCCCCTTA-AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* *
17669869 AAATGGGGACACTTTTTTCAAATCGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGA
841 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * *
17669929 TTTTTTTTATGGATGCCAACAAAAATACAAGGATCACGTCTACCAATTTTGGGGCCAAAACTCCT
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* *
17669994 TTCGAAAAAATTTTAAAAAATCCCAAACCATAAAATGTTTCAAAAATCGTGAAAAATAGAAAACG
66 TTCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
*
17670059 AGTCGTCTTGCCATGGAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
131 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
** * * *
17670124 AAAATGGCATTGGCATGTAGAAATCTGAAGATGGGCCTAAACCCACCTACCACCCTATTGATCCA
196 AAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* ** *
17670189 TGGCTTGCGCATCTCGTCTCTCTAACCGGCGTAGTGCCTGCCCGCCCGCCCGCTTGCTCGTTTCA
261 CGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CCGC-TGCTCGTTTCA
* * *
17670254 TCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTACGAT
324 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGT
* * * ** ** * *
17670319 AGCAAGATCAGTAGCACGTAGAGGGGGACCCTTTC-ATTCCCTGGCTTATGCATCTCACCCCTC-
389 AGCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGA-TCCCTGGCTTGCGCATCCCGCCCCTCT
** * ** * * **
17670382 GATCGGTTGAGCATCCGCACGCTCGTTCCGTGGGTTGACTGAGGCATACAAAGTTCATTCCCAGT
453 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * *
17670447 TTAAGCATACGTAGTTCATTCCCAGTCTAAGATCGGATCGGACCAAGGGTTGCGACAGCACATGC
518 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGC
** * * *
17670512 TGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATTGGGGCACCATCGTCGGGGCATCGTCG
583 TGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCG
* * *
17670577 GAGAACTTGACCGGTAATATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATGA
648 GAGAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGC-CGGGGGGTGTGCGCACATGA
* * *
17670642 TGTGTGATGGGTACTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
712 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
17670707 TCACACCCCCTTAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
777 TCACACCCCCTTAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17670772 AATGGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGA
842 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * * *
17670831 TTTTTTTTGTACATGCC-AACAAAA-ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-TT
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * ** *
17670893 TTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAAC
66 TT-CGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
*
17670958 GAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
130 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
*** *
17671023 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACC-CCCTATTGATCC
195 AAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * ** *
17671087 ACGGCTTGCGCATCTCGTCTCCCTGGTCAACGTAGTGCCCGCCCGCCCGAC-C-GCTCGTTTCAT
260 ACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCAT
* * ** * * **
17671150 CGGTTGGCTTAGGCATATGGAGTTGATTCCCAGTCTAAGATTGGACCAAACCGAGGGTTGCGGCG
325 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGTA
* * * * * * * *
17671215 GCAAAATTGGCAGCATGTAGTGGGGGACCCGGCCGATCCCCGGCTTGCGCAAT-TCGCCCCTCTG
390 GCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGC-ATCCCGCCCCTCTG
* * *
17671279 GCCAGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTTCCGGTC
454 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * * * *
17671344 TAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGATTGCGGCAGCACATACT
519 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
* * *
17671409 GGGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGTTGGGGCACCA---TC---G---C--C-G
584 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCGG
*
17671462 -G-A--T-----GT--CATTGGGGTTCCGACGATCAGGCGGGCC-GGGGGTGTGCGCACATGATG
649 AGAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATG
** *
17671515 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCTTCCTATCCCTCATCAAACCTTGAGAACTC
714 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
17671580 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGTAGCCATTAAAGTGTGTGTA
779 ACACCCCCTT-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * * **
17671645 ATGGAGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGACTTTTTAATTGA
843 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * *
17671703 ATTTTTTTGTGCATGCCAAAAAAAATACGAGGATGACGTCTACCAAGTTTGGGGCCAAAAAT-CT
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * *
17671767 TTCCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAATTTTCAAAAATCGTGAAAAATAGAAAAC
66 TT-CGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* * *
17671832 GTGTTGTCTTTCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
130 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
17671897 AAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
195 AAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * *
17671962 ACAGCTTGCGCATC-CGTCTCTCTGGCCGGCGTAGTGCCCGCCTGTCCG-C-CTGCTCGGTTCAT
260 ACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCAT
* * * ** *
17672024 CGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATTAGACCAAATTG-AGAGTTGCAGT
325 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAG-GTTGCGGT
* * * * * *
17672088 AGCAGGATCGGTAGCACACAGAGGGGGACCCGATTGATCCCCGGCTTGCGCATCCCGCCCCTCTG
389 AGCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTG
* * * *
17672153 GCCGACTGAGCGCTCGCACGCTCATTTC-------G--TT-GG--T--TGA---C-TT---AG--
454 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* *
17672195 ---GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGTTTACGGCAGCACATGCT
519 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
* *
17672257 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCCTCGTCGGGGCACCATCGTC-GAAGCATCGTCG
584 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAG-AGCATCGTCG
* ** ***
17672321 GAGAGCTTGACTAGCGGCATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGAT
648 GAGAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGAT
* *
17672386 GTGCGATGGTTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
713 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* *
17672451 CACACCCCTTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
778 CACACCCCCTT-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17672516 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTTTGAGTTTTTAGCTGA
842 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGA
* * *
17672576 ATGTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCC-
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
**
17672640 TTCTGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
66 TTC-GAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
*
17672705 GAGTCGTCTTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
130 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
** *
17672770 AAAAATGGCATTGGCATGTAGAAATATCAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
195 AAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * *
17672835 ACAGCTTGCGCATCTCGTCTCTCTGGCCCGCGTAGTGCCCGCCCGCCC-CCCCTCCCACTCGTTT
260 ACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCT---GCTCGTTT
* * ** *
17672899 CATTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGATGGTTGCG
322 CATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCG
* * ** * * *
17672964 GTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCTTGGCTTACACATCCCGCCCCTC
387 GTAGCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTC
* * *
17673029 TAGCCGGCTAAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTAG
452 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
17673094 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAATCTAAGCTCAGAC
517 TCTAAGCATACGGAGTTCATTCCCAG--T---C-TA---AG----------ATC---G----GAC
** * * * * * *
17673159 CGGACCGAGTTTTGCGGCAGGACATGCTAGGCTTGGGCATGTGCTGGTGCCGCATTTTTTTTCAC
556 CGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCAT
* * * * ** * ** *
17673224 CAGGCCACCATCATCGGAGCATCACCAGAGAACTTGACCGGTGGCATTGGGGTTCC-AGCGAT-T
621 CGGGGCACCATCGTCAGAGCATCGTCGGAGAACTTGACCGGTAACATTGGGGTTCCGA-CGATCA
* * *
17673287 GAGGGGGCCGGGGGGGGTGTGCGCACATGACT-T---A---G-GC--ATA-TAGAG---TT-CAT
685 G-GGGGGCC--GGGGGGTGTGCGCACATGA-TGTGCGATGGGTGCTGGTACTTG-GCCCTTATAT
* **** * * * * * *** * *
17673337 T----CCCAATCTAAGATCAAACCGGACTGAGGGA-TGCGACAGCACATGCTGGGC--TTGGGCA
745 TGGCCCCCTATCCCTCATCAAACC--TC-GA-GAACT-C-ACACCCCCTTAAGAGCATTTGAG-A
* * * * * ** *** *** *
17673395 TGTGCTGGTGCTGTATTTTTCT-TCATCGGGGCACCATCCCCGGAGAACCTGACA-GGCGG-CA-
803 T-T--T--TACAG--GTTTGCTGCCA--GTAG--CCAT---TAAAGTGTCTGAAATGG-GGACAC
** ** * * ****** * ***** * * *
17673456 TTGGGGTTCCGACGATCAGGGGGGC-CGGGGGGTGTGCGCACATGATGT-GC-G-
853 TT--TTTTCAAATGGTCACAAAATCTTGTACACT-T-CG-A-GT-TTTTAGCTGA
** ** * * *** * * * **** * * ** * **
17673507 ATGGGTGCTAGTACTTGGCC-CTTATATTGGCCCCCTATC-CCTC-ATCAAACCTCGAGAACTCA
1 AT-TTTTTTA-TGCAT-GCCAAAAAAAAT--ACAAGGATCACGTCTA-CCAAGTTTG-GGGC-CA
* * * ** * * **** * * * * **
17673569 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT-TAAAGTGTCTGAA
58 AAACTCCTT-TCGA--A---AAAATTTTA-AAAAAT-C--CCA--AACCGTAAAAAGTTTCAAAA
* * *** **** * * * ** ** * *
17673633 ATGGGGACACTTTTTTCAA--A-TGGTC---ACA--AAATCTTGAACACTTTCAGTTTTTA-GCA
111 ATCGTGA-AAAATAGAAAACGAGTCGTCTTGCCATGAAA-CTT---CACGTGAAGGCTTAAGGGA
** * * * * ** ** * *
17673689 AAATT-T-T---TTTATGCATGCCAACAAAAAT-ACA-TGG-ATCA-CG-TCTACCAAGTTTGGG
171 CCATTGTATGAATTTA--CAAGCC-ATAAAAATGGCATTGGCA-CATAGAAATATGAAG-AT-GT
* * * ** *** * ** * ** *
17673744 GCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTTGAACCACAAAAGG-TTTTGAAAATCGTGA
230 GCCTAAAC-CC-ACC--TACCACCCT-----ATC--GATCCAC----GGCTTGCGCATCTCGT-C
**** * **** * * ** * ** **
17673808 AAAATAGAAAACG-AGT---TG---TCTTGCC-ATGAAAC--TTCA-CGTGAAGGCTTAAGGGAC
279 TCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTG-CTCGTTTCATCG-GTTGGCTT-A-GG--
* * ** * * * * * * *** * * ** ***
17673862 CAT-TGTA-TGAATTTACAAGCCATAA-AACTG-GCA-TTGGCACGCAGAAATAAG-AAGAT-GT
338 CATACGGAGTTCA-TTCCCAGTC-TAAGATCAGACCAGACCGAAGGTTGCGGT-AGCAAGATCG-
* * ****** ** * *
17673920 GCCTA-AACCCA-CCTACCACCCTATCGATCCAC-GGCTTGCGCATCCCGTCTCTCTGGCCGGCA
399 G-C-AGCACGCAGAGGGGGACCCGGTCGATCC-CTGGCTTGCGCATCCCGCCCCTCTGG-C--C-
* * **** * **
17673982 TAGTGCTCGCCAGCCCGCCCGCCCGCTTGTTTTAACGGTTGGCTTAGGCATATAGAGTTCATTCC
457 --G-GCT-G--AG--CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * * * *** ** ****
17674047 CAGTCTAAGATCAGATCAGA-CTGAGGGTTGCAGCAGCACGGGGAGGGGGACCTGG-CCGATCCC
514 CAGTCTAAG--CATA-CGGAGTTCA---TT-C-CCAG-TCTAAGA-TCGGACC-GGACCGAGGGT
* * ** * * *
17674110 TG-GG-ATGTAC--GCTCGTTTCGTGG-GT-TGACTTAGGCAT-ACGAAGTTCATTCCCAGTCTA
568 TGCGGCA-GCACATGCTGGGCTCG-GGCATGTG-C-T-GG--TGCCGTA-TT--TT-----TCT-
** * * ** *
17674168 AGATCGGACCGG-ACCGAGGGTTGTGACAGCA-CAT-GCTGGGCTCAG-ACATGTG-GTGGTGCC
617 TCATCGG---GGCACC-A---TCGT--CAG-AGCATCG-TCGG---AGAAC-T-TGACCGGT--A
**** * * * *** ** * ***
17674228 ACATTTTTCTTCACCGGGGCACCATC-GTCGGAGCATCGCAGAGAACCTGACCGGCGGCATTGGG
664 ACATTGGGGTT--CC---G-ACGATCAG-GGGGGC--CG--G-G-GGGTGTGC-GC-ACATGATG
* * * *** * *
17674292 GTTCCAACGATCGGGGGGCCGGGGGGGTGTGCGCACAGATGTGCGATGGGTGCTGGTACTTGGCC
714 --T---GCGAT--GGGTG-C-TGGTACT-TG-GC-C--CT-T---AT--AT--TGG--C----CC
* ** * ** *
17674357 CTTAT-ATTGGCACCCTATCCCTCACCAAACCACGAGAACTCACACCCCCTTAAAGAACATTTGA
751 CCTATCCCT--CA-TC-AAACCT--C--------GAGAACTCACACCCCCTT-AAGAGCATTTGA
*
17674421 GATTTTACAGGTTTGCTGCCACTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
801 GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
17674486 TCACAAAATCTTGTACACTTCGAAG-TTTTAGCTGA
866 TCACAAAATCTTGTACACTTCG-AGTTTTTAGCTGA
* * *
17674521 ATTTTTTTTTTGCATGGCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
1 A-TTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC
* * *
17674586 TTCCAAAAAAATTTTAAAAAATCCCGAACC-TCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
65 TTTCGAAAAAATTTTAAAAAATCCCAAACCGT-AAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
* * * * **
17674650 TGATTTGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGAGA
129 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* * * *
17674715 GAAAAATGGCATTGGCACGTAAAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATCGATC
194 TAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * *
17674780 CACGGCTTGCGCATCCCGTCTCTTTGGTCGGCGTAGATCTCGCCCGCCCGCCCGCC-C-GCTTGT
259 CACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAG---T-GCCCGCCCGCCCGCCGCTGCTCGT
** * * * *
17674843 TTTGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCAATCTAAGATCAGACCGGA-CAAAGGGTT
320 TTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAA-GGTT
* * * ** * ** * * * ** *
17674907 GCGGCAACAGGATCGATAACATACGGAGGGGGATCAGACCGATCCCTGGCTTGTGCATCCCGCCC
384 GCGGTAGCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCC
* * *
17674972 CTCTGGCTGGCTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCC
449 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * * * * * * *
17675037 TAGTCTAACCATACAGAGTTCATTGCTAGTCTAAGATCGGACTGGACTGAGGGTAGCGGTAGCAC
514 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCAC
* ** * ** * * * *
17675102 ATGTTGGGCTCGGGCATGTGCTACTGTCACATTTTTCTTCCTCGGGCCACCATC-ACTGGAGCAT
579 ATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTC-AGAGCAT
** * * * ***
17675166 CACCGGAGAACCTAATCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCAGAGGGGGGTGTGCG
643 CGTCGGAGAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCC---GGGGGGTGTGCG
* *
17675230 CACATGATGTGC----GGTGCGGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCT
705 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
* * * *
17675291 TGAGAACTCACACCCCATTAAAGAGCATTTTAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAA
770 CGAGAACTCACACCCCCTT-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* *
17675356 GTGTCTGGAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCT
834 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
17675421 GA
899 GA
* * *
17675423 ATTTTTTTATGCATGCCAACAAAAATACATGGATCACGTCTACCAAGTTTGGGGCCAAAACGCC-
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * * * * *
17675487 TTCCAAAAAAATTTAAAAAATCCCGAACCGTAAAAAGTTTTACAAATCATGAAAAATAAAAAACG
66 TTCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
* *
17675552 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGAGACCATTGTAAGAATTTACAAGCCATA
131 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
*** *
17675617 AAAATGGCATTGGCATGCAGAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
196 AAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
** * * * ** *
17675682 CGGCTTTTGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCACCCG--C-CCAAT-CAT--TTT-GT
261 CGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGC-TCGTTTCAT
* * * * * * **
17675740 CAGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATCAGACC-GAATCGAGGGTTGTGAC
325 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAAGGTTGCGGT
* *
17675804 AGCAGGATCGGCAGCACGTAGA---GG----GG--GA-CCC-GGC-T--G-A---------TC--
389 AGCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTG
** * * *
17675843 -CC--C-GA--G-ATGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGAAGTTCATTTCCAGTC
454 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* *
17675901 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCGGCAGCACATGCT
519 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCT
* * * * * * * *
17675966 GGGCTCGGCCATGTGCTGGTGCTGCATTTTTCTTCGTC-GAGCACCTTCATCGGAGCATCGTCGG
584 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCGG
* * * * *
17676030 AGAACCTGACCGGCGACATAGGGGTTCCGACAATCGGGTTCCGACAATCGGGGGGGCCGGGGGGG
649 AGAACTTGACC-G-G---TA---------ACATTGGGGTTCCGACGATCAGGGGGGCC-GGGGGG
** *
17676095 CTGTGCGCACATGATGTGCGATGGGTGCTGGTACTCCGCCCTTATATTGGCCCCCTATCCCACAT
699 -TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAT
* *
17676160 CAAACC-CTGAGAACTCACA-ACCCTTAAAGAGCATTTGAGTTTTTACAGGTTTGCTGCCAGTAG
763 CAAACCTC-GAGAACTCACACCCCCTT-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
* * * *
17676223 CCTTTAAAGTGTCTGAATTGGGAACACTTTTTTCAAATGATCACAAAATCTTGTACACTTCGAGT
826 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
17676288 TTTTAGCTGA
891 TTTTAGCTGA
* * *
17676298 ATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
* * * ** * *
17676363 TCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAACGTTTTGAAATTCTTGAAAAATAGAAAACG
66 TTCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
*
17676428 AGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
131 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
***
17676493 AAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
196 AAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* *
17676558 TGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCCGCC-C-GCTCGTTTCATC
261 CGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCATC
* * * ** * *
17676617 GGTTAGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCATACCAGATTG-AGTGATGTGGTA
326 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAG-GTTGCGGTA
* * * * * *
17676681 GTAGGATCGGCAGCACGCAGAGGGGGACCCTGTCGATCCCCGACTTGCGCATCCCACCCCTCTGG
390 GCAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGG
* * ** ** * *
17676746 CCAGCTGACCGCATGCACATTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCT
455 CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
** * ** ** *
17676811 AAGCATACTTAGTTCATTCCCAGTCTAAGATTGGACCATACCGAGGGTTGCAACAGCACATGCCG
520 AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
** * *
17676876 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCA---T-----CA---TCGAA
585 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCGGA
* * * * * * *
17676930 GAACCTGACCGGCAGCATTGGGGTTCTGGCGATC--GGGGGCTGGGGGGTGTGCACACATGATGT
650 GAACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGT
* *
17676993 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCATCATCAAACCTTGAGAACTCA
715 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
17677058 CACCCCCTTCAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAACCATTAAAGTGTCTAAAA
780 CACCCCCTT-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * * *
17677123 TAGGGACACTTTTTTCAAATGGTCACAAAATTTTGTAAACCTCGAGTTTTTAGCTCA
844 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* * * *
17677180 TTTTTTTTTTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAA-TACC
1 ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CC
** *
17677244 -TTCTGAAAAAA-TTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
65 TTTC-GAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
** * * *
17677307 CGAGTTATCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATAAATTTGCAAGCCA
129 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
* *** * *
17677372 GAAAAATGGCATTGGCATGCAGAAATATGAAAATGTGCCTAAACCCACCTACTACCCTATCGATC
194 TAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * ** * * *
17677437 CACGGCTTGCACATCCCGTCTCTCTGGTCGGCGTAGT----GCCTACCCGCC-C-ACTCATTTCG
259 CACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCA
* * * ** *
17677496 TCGGATAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGT
324 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGT
17677561 AGCA
389 AGCA
17677565 CATGCTGGGC
Statistics
Matches: 6713, Mismatches: 1282, Indels: 1063
0.74 0.14 0.12
Matches are distributed among these distances:
848 100 0.01
851 2 0.00
853 1 0.00
854 1 0.00
856 2 0.00
857 2 0.00
858 27 0.00
859 133 0.02
860 4 0.00
861 1 0.00
862 3 0.00
863 1 0.00
864 3 0.00
865 3 0.00
867 1 0.00
868 2 0.00
869 1 0.00
871 122 0.02
872 335 0.05
873 309 0.05
874 401 0.06
875 215 0.03
876 642 0.10
877 5 0.00
878 140 0.02
879 4 0.00
880 3 0.00
881 356 0.05
882 185 0.03
883 11 0.00
884 1 0.00
885 19 0.00
886 3 0.00
887 297 0.04
888 419 0.06
889 4 0.00
890 5 0.00
891 63 0.01
892 71 0.01
893 9 0.00
894 3 0.00
895 111 0.02
896 165 0.02
897 7 0.00
898 2 0.00
899 72 0.01
900 406 0.06
901 69 0.01
902 438 0.07
903 132 0.02
904 25 0.00
905 1 0.00
906 3 0.00
907 1 0.00
908 1 0.00
909 140 0.02
910 8 0.00
912 4 0.00
913 3 0.00
914 2 0.00
915 19 0.00
916 1 0.00
917 4 0.00
918 5 0.00
919 11 0.00
920 8 0.00
921 4 0.00
922 2 0.00
923 10 0.00
924 2 0.00
925 9 0.00
926 3 0.00
928 5 0.00
929 7 0.00
930 119 0.02
931 23 0.00
932 27 0.00
933 13 0.00
934 16 0.00
935 9 0.00
936 17 0.00
937 13 0.00
938 14 0.00
939 25 0.00
940 17 0.00
941 13 0.00
942 14 0.00
943 22 0.00
944 48 0.01
945 19 0.00
946 14 0.00
947 29 0.00
948 18 0.00
949 3 0.00
950 13 0.00
951 6 0.00
952 4 0.00
953 18 0.00
954 10 0.00
955 1 0.00
956 55 0.01
957 3 0.00
958 7 0.00
959 16 0.00
960 3 0.00
961 12 0.00
962 4 0.00
963 7 0.00
964 6 0.00
966 1 0.00
967 9 0.00
968 1 0.00
969 4 0.00
970 4 0.00
971 3 0.00
972 6 0.00
973 6 0.00
975 1 0.00
978 2 0.00
980 5 0.00
981 11 0.00
982 8 0.00
983 6 0.00
984 8 0.00
985 4 0.00
986 1 0.00
987 5 0.00
988 6 0.00
990 48 0.01
992 9 0.00
993 11 0.00
994 1 0.00
995 3 0.00
996 8 0.00
997 1 0.00
998 10 0.00
999 21 0.00
1000 17 0.00
1001 15 0.00
1002 48 0.01
1003 24 0.00
1004 12 0.00
1005 13 0.00
1006 11 0.00
1007 13 0.00
1008 7 0.00
1009 6 0.00
1010 8 0.00
1011 8 0.00
1012 12 0.00
1013 8 0.00
1014 6 0.00
1015 20 0.00
1016 6 0.00
1017 2 0.00
1018 8 0.00
1019 1 0.00
1020 2 0.00
1021 9 0.00
1022 2 0.00
1023 3 0.00
1024 266 0.04
1025 332 0.05
1026 294 0.04
1027 479 0.07
1028 316 0.05
1029 515 0.08
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (900 bp):
ATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT
TTCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACG
AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
AAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
CGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCTGCTCGTTTCATC
GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAAGGTTGCGGTAG
CAAGATCGGCAGCACGCAGAGGGGGACCCGGTCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGC
CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAGAGCATCGTCGGAG
AACTTGACCGGTAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
Found at i:17671357 original size:26 final size:26
Alignment explanation
Indices: 17671321--17671373 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17671311 GTTGACTTAG
* *
17671321 GCATACGGAGTTCATTTCCGGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17671347 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17671373 G
1 G
17671374 ATCAGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.23, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17672821 original size:873 final size:871
Alignment explanation
Indices: 17668673--17673099 Score: 5133
Period size: 874 Copynumber: 5.0 Consensus size: 871
17668663 CCCTGTGTAA
* * * * * * *
17668673 GCATACTGAGTTCATTCCTAGTCCAAGATCGGACCGGACCGGGGGTTACAGCAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * **
17668738 CTTGAGCATGTGCTGGTGTCGTATTTTTCTTCACCGGGGCACCAACGTCAGAGCATTATCGGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCA-AGCATCGTCGGAGA
** * * **
17668803 ACCCGACCGGCAGCGTTGGGGTTCCGACGATTGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
130 ACTTGACCGGCAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
17668868 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAG-----A-A
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
17668927 ------TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
17668986 GGGATACTTTTTTCAAATGGTCACAAAATCTTGCACACTTTCGAGTTTTTAGCTGAATTTTTTTA
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTTTG
* *
17669051 TGCATGCCAAAAAAAATACAAGGATCACCTCTACCAGGTTTGGGGCCAAAACTCCTTCCGAAAAA
389 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * ** *
17669116 ATTTCAAAAGATTTTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* * * **
17669181 GCCATGAAACTTCACGCGAAGGCTTGAGGGACCATTGTATGAATTTGCAAGAAATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*** * * * *
17669246 TTGGCACACAAAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTACG
584 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * *
17669311 CATCCCGGCTCTCTGGCCGGCGCAGTGCCCGCCTGCCCGGCTGCTCGTTTCGTCGGTTGGCTTAG
649 CATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCATCGGTTGGCTTAG
* * *
17669376 GCATACGGAGTTCATTCTCAGTCTAAGATCAGACCGGACC--GAG--G-GTTGC---A---GCAG
714 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGAGTTGCGTAGCAAGATCGGCAG
* ** * * * * * * *
17669430 CACGCAAAGGGGGATGCGGCTGAGCTCTGGCTTGCGCATCCTGCTCCTATGGCCG-GTCGAGCGC
779 CACGCAGAGGGGGACCCGACTGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACT-GAGCGC
* * *
17669494 CCGCACGTTCGTTTTGTGTGTTGACTTAG
843 CCGCACGCTCGTTTCGTGGGTTGACTTAG
* *
17669523 GCATACAGAGTTCATTCTCAGTCTAAGCATACAGAGTTCATTTCCAGTCTAAGATCAGACCAGGC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C---G----G---A--C
* * *
17669588 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCATATTTTTCTTCACCGGGT
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGG
* * * * * ** *
17669653 TACCTTTGTCAGAGCATCGCCAGAGAACTTGACCGGTGACATTGGGGTTCCGGCGATC-GGGGGG
105 CACCATCGTCA-AGCATCGTCGGAGAACTTGACCGGCAACATTGGGGTTCCGACGATCAGGGGGG
17669717 CCGGGAGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
169 CCGGG-GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* * * *
17669782 TCCGTCATCAAACCTCAAGAACTCACACCCCCTTATAGAGCATTTGAGATTTTATAGGTTTGCTG
233 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* *
17669847 CTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATCGTCACAAAATCTTGTACAC
298 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * * * *
17669912 TTCAAGTTTTTAGCTGATTTTTTTTATGGATGCCAACAAAAATACAAGGATCACGTCTACCAATT
363 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
* ** * *
17669977 TTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCCAAACCATAAAATGTTTCAAAAATC
428 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATC
*
17670042 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGGAACTTCACGTGAAGGCTTAAGGGACCATTGTA
493 GTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* *
17670107 TGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATCTGAAGATGGGCCTAAACCCACCT
558 TGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCT
* * **
17670172 ACCACCCTATTGATCCATGGCTTGCGCATCTCGTCTCTCTAACCGGCGTAGTGCCTGCCCGCCCG
623 ACCACCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTA--G--TGCCCGCCCG
* *
17670237 CCCGCTTGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACC
684 CCCGCCTGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC
* * * * ** *
17670302 AGACCGA-AGGTTACGATAGCAAGATCAGTAGCACGTAGAGGGGGACCC-TTTCATTCCCTGGCT
749 AGACCGAGA-GTTGCG-TAGCAAGATCGGCAGCACGCAGAGGGGGACCCGACTGA-TCCCTGGCT
** * * ** ** ** *
17670365 TATGCATCTCACCCCTC-GATCGGTTGAGCATCCGCACGCTCGTTCCGTGGGTTGACTGAGGCAT
811 TGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGG-T---T---G---
17670429 ACAAAGTTCATTCCCAG
866 ----A---C-TT---AG
* * * *
17670446 TTTAAGCATACGTAGTTCATTCCCAGTCTAAGATCGGATCGGACCAAGGGTTGCGACAGCACATG
1 -----GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATG
** * **
17670511 CTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATTGGGGCACCATCGTCGGGGCATCGTC
61 CTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTC-AAGCATCGTC
* * * *
17670576 GGAGAACTTGACCGGTAATATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGGTGTGCGCACATG
125 GGAGAACTTGACCGGCAACATTGGGGTTCCGACGATCAGGGGGGC-CGGGGGGTGTGCGCACATG
* * *
17670641 ATGTGTGATGGGTACTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
189 ATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAA
17670706 CTCACACCCCCTT-AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
254 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * *
17670770 GAAATGGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGATTTT
319 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* * **
17670835 TTTTGTACATGCC-AACAAAA-ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTTTTCCG
384 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
** *
17670898 AAAAAATTTTAAAAAAT-CTCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGT
449 AAAAAATTTTAAAAAATCCT-GAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
*
17670962 CGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
513 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* *
17671027 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACC-CCCTATTGATCCACGG
578 ATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * **
17671091 CTTGCGCATCTCGTCTCCCTGGTCAACGTAGTGCCCGCCCGCCCGACC-GCTCGTTTCATCGGTT
643 CTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG-CCTGCTCGTTTCATCGGTT
* * ** * * ** *
17671155 GGCTTAGGCATATGGAGTTGATTCCCAGTCTAAGATTGGACCAAACCGAGGGTTGCGGCGGCAAA
707 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGAGTTGC-GTAGCAAG
* * * * * * * *
17671220 ATTGGCAGCATGTAGTGGGGGACCCGGCCGATCCCCGGCTTGCGCAAT-TCGCCCCTCTGGCC-A
771 ATCGGCAGCACGCAGAGGGGGACCCGACTGATCCCTGGCTTGCGC-ATCCCGCCCCTCTGGCCGA
17671283 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGG
835 -CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC-T-----TA--G
* * *
17671329 AGTTCATTTCCGGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGACCGGATCGAGGATT
1 -G--CA---------T-A-C----GGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTT
* * * *
17671394 GCGGCAGCACATACTGGGCTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGTTGGGGCACCA---
48 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCG
* *
17671456 TC--G---C--C-G-G-A--T-----G--TCATTGGGGTTCCGACGATCAGGCGGGCC-GGGGGT
113 TCAAGCATCGTCGGAGAACTTGACCGGCAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGT
**
17671501 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCTTCCTATCCCTCATCA
178 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* *
17671566 AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGTAGCCA
243 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * * * *
17671631 TTAAAGTGTGTGTAATGGAGACACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGACTTTT
308 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
** * *
17671696 TAATTGAATTTTTTTGTGCATGCCAAAAAAAATACGAGGATGACGTCTACCAAGTTTGGGGCCAA
373 TAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * ** * *
17671761 AAATCTTTCCAAAAAAATTTTAAAAAATCCCAAACCGCAAAAATTTTCAAAAATCGTGAAAAATA
438 AACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATA
* * *
17671826 GAAAACGTGTTGTCTTTCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
503 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
**
17671891 AGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
568 AGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * *
17671956 CGATCCACAGCTTGCGCATC-CGTCTCTCTGGCCGGCGTAGTGCCCGCCTGTCCGCCTGCTCGGT
633 CGATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTT
* * * **
17672020 TCATCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATTAGACCAAATTGAGAGTTGC
698 TCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGAGTTGC
* * * * *
17672085 AGTAGCAGGATCGGTAGCACACAGAGGGGGACCCGATTGATCCCCGGCTTGCGCATCCCGCCCCT
763 -GTAGCAAGATCGGCAGCACGCAGAGGGGGACCCGACTGATCCCTGGCTTGCGCATCCCGCCCCT
* * *
17672150 CTGGCCGACTGAGCGCTCGCACGCTCATTTCGTTGGTTGACTTAG
827 CTGGCCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
* *
17672195 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGTTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
17672260 CTCGGGCATGTGCTGGTGCCGTATTTTTCCTCGTCGGGGCACCATCGTCGAAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTC-AAGCATCGTCGGAGA
* ** **
17672325 GCTTGACTAGCGGCATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
130 ACTTGACCGGCAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
17672390 GATGGTTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
17672455 CCCCTTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
17672520 GGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTTTGAGTTTTTAGCTGAATGTTTTTG
325 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTTTG
* *
17672585 TGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
389 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
17672650 ATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
454 ATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
*
17672715 GCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
17672780 TTGGCATGTAGAAATATCAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCG
584 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
17672845 CATCTCGTCTCTCTGGCCCGCGTAGTGCCCGCCCGCCCCCCCTCCCACTCGTTTCATTGGTTGGC
649 CATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CCCGCCT---GCTCGTTTCATCGGTTGGC
* ** *
17672910 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGATG-GTTGCGGTAGCAGGAT
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGA-GAGTTGC-GTAGCAAGAT
* * * * * * * *
17672974 CGACAGCACGCAGAGGGGGACCCGACCGATCCTTGGCTTACACATCCCGCCCCTCTAGCCGGCTA
773 CGGCAGCACGCAGAGGGGGACCCGACTGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACTG
17673039 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
838 AGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
*
17673073 GCATACGGAGTTCATTCCTAGTCTAAG
1 GCATACGGAGTTCATTCCCAGTCTAAG
17673100 CATACGGAGT
Statistics
Matches: 3052, Mismatches: 367, Indels: 288
0.82 0.10 0.08
Matches are distributed among these distances:
848 95 0.03
850 23 0.01
851 4 0.00
852 2 0.00
853 2 0.00
854 3 0.00
857 2 0.00
859 1 0.00
860 1 0.00
861 2 0.00
863 2 0.00
864 2 0.00
865 1 0.00
866 1 0.00
867 1 0.00
868 2 0.00
869 1 0.00
871 117 0.04
872 296 0.10
873 302 0.10
874 405 0.13
875 43 0.01
876 175 0.06
878 179 0.06
879 5 0.00
880 1 0.00
881 4 0.00
882 3 0.00
883 2 0.00
884 2 0.00
885 1 0.00
887 274 0.09
888 91 0.03
889 2 0.00
890 2 0.00
891 74 0.02
892 3 0.00
893 3 0.00
895 121 0.04
896 123 0.04
897 4 0.00
899 40 0.01
900 203 0.07
901 5 0.00
902 252 0.08
903 130 0.04
904 4 0.00
906 1 0.00
907 1 0.00
909 1 0.00
911 1 0.00
914 1 0.00
916 1 0.00
919 1 0.00
920 2 0.00
921 1 0.00
923 2 0.00
924 1 0.00
925 1 0.00
926 1 0.00
927 2 0.00
928 24 0.01
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (871 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCAAGCATCGTCGGAGAA
CTTGACCGGCAACATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
TTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
TCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCTGCTCGTTTCATCGGTTGGCTTAGGC
ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGAGTTGCGTAGCAAGATCGGCAGCA
CGCAGAGGGGGACCCGACTGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCG
CACGCTCGTTTCGTGGGTTGACTTAG
Found at i:17673109 original size:26 final size:26
Alignment explanation
Indices: 17673073--17673152 Score: 133
Period size: 26 Copynumber: 3.1 Consensus size: 26
17673063 GTTGACTTAG
*
17673073 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17673099 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
17673125 GCATATGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17673151 GC
1 GC
17673153 TCAGACCGGA
Statistics
Matches: 51, Mismatches: 3, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17675050 original size:26 final size:26
Alignment explanation
Indices: 17675020--17675070 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
17675010 TTGACTTAGG
*
17675020 CATACGGAGTTCATTCCTAGTCTAAC
1 CATACAGAGTTCATTCCTAGTCTAAC
*
17675046 CATACAGAGTTCATTGCTAGTCTAA
1 CATACAGAGTTCATTCCTAGTCTAA
17675071 GATCGGACTG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.24, G:0.16, T:0.31
Consensus pattern (26 bp):
CATACAGAGTTCATTCCTAGTCTAAC
Found at i:17675915 original size:26 final size:26
Alignment explanation
Indices: 17675878--17675930 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17675868 GTTGACTTAG
*
17675878 GCATACGAAGTTCATTTCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17675904 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17675930 G
1 G
17675931 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17676068 original size:14 final size:14
Alignment explanation
Indices: 17676051--17676081 Score: 62
Period size: 14 Copynumber: 2.2 Consensus size: 14
17676041 GGCGACATAG
17676051 GGGTTCCGACAATC
1 GGGTTCCGACAATC
17676065 GGGTTCCGACAATC
1 GGGTTCCGACAATC
17676079 GGG
1 GGG
17676082 GGGGCCGGGG
Statistics
Matches: 17, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
14 17 1.00
ACGTcount: A:0.19, C:0.26, G:0.35, T:0.19
Consensus pattern (14 bp):
GGGTTCCGACAATC
Found at i:17676817 original size:26 final size:26
Alignment explanation
Indices: 17676787--17676839 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17676777 GTTGACTTAG
17676787 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
**
17676813 GCATACTTAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17676839 G
1 G
17676840 ATTGGACCAT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.26, G:0.15, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17677393 original size:881 final size:892
Alignment explanation
Indices: 17675865--17677538 Score: 2464
Period size: 881 Copynumber: 1.9 Consensus size: 892
17675855 GCTCGTTTTG
*
17675865 TGGGTTGACTTAGGCATACGAAGTTCATTTCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
1 TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
** * **
17675930 GATCGGACCAGACCAAGGGTTGCGGCAGCACATGCTGGGCTCGGCCATGTGCTGGTGCTGCATTT
66 GATCGGACCAGACCAAGGGTTGCAACAGCACATGCCGGGCTCGGCCATGTGCTGGTGCCACATTT
*
17675995 TTCTTCGTCGAGCACCTTCATCGGAGCATCGTCGGAGAACCTGACCGGCGACATAGGGGTTCCGA
131 TTCTTCGTCGAGCACC-TCAT----GCA-C-TCGAAGAACCTGACCGGCGACATAGGGGTT-C--
*
17676060 CAATCGGGTTCCGACAATCGGGGGGGCCGGGGGGGCTGTGCGCACATGATGTGCGATGGGTGCTG
186 C-ATC-GG-T-CG--AATC-GGGGGGCCGGGGGGGCTGTGCACACATGATGTGCGATGGGTGCTG
17676125 GTACTCCGCCCTTATATTGGCCCCCTATCCCACATCAAACCCTGAGAACTCACAACCCTTAAAGA
244 GTACTCCGCCCTTATATTGGCCCCCTATCCCACATCAAACCCTGAGAACTCACAACCCTTAAAGA
* * * * * *
17676190 GCATTTGAGTTTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAATTGGGAACACTTTTT
309 GCATTTGAGATTTTACAGGTTTGCTGCCAATAACCATTAAAGTGTCTAAATAGGGAACACTTTTT
* * *
17676255 TCAAATGATCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAA
374 TCAAATGATCACAAAATCTTGTAAACCTCGAGTTTTTAGCTCAATGTTTTTGTGCATGCCAACAA
*
17676320 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
439 AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* ** * * *
17676385 CCAAACCGCAAAACGTTTTGAAATTCTTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTC
504 CCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTATCTTGCCATGAAACTTC
* * *
17676450 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
569 ACGTGAAGGCTTAAAGGACCATTGTATAAATTTACAAGCCAGAAAAATGGCATTGGCATGCAGAA
* * *
17676515 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTC
634 ATATGAAAATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCTC
* * * *
17676580 TGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTAGCTTAGGCATACAGAGTTCATTC
699 TGGCCGGCGTAGTGCCCACCCGCCCACTCATTTCATCGGATAGCTTAGGCATACAGAGTTCATTC
17676645 CCAGTCTAAGATCATACCAGATTGAGTGATGTGGTAGTAGGATCGGCAGCACGCAGAGGGGGACC
764 CCAGTCTAAGATCATACCAGATTGAGTGATGTGGTAGTAGGATCGGCAGCACGCAGAGGGGGACC
17676710 CTGTCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCAGCTGACCGCATGCACATTCGTTTCA
829 CTGTCGATCCCCGACTTGCGCATCCCACCCCTCTGGCCAGCTGACCGCATGCACATTCGTTTCA
**
17676774 TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACTTAGTTCATTCCCAGTCTAA
1 TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17676839 GATTGGACCATACCGAGGGTTGCAACAGCACATGCCGGGCTCGGGCATGTGCTGGTGCCACATTT
66 GATCGGACCAGACCAAGGGTTGCAACAGCACATGCCGGGCTCGGCCATGTGCTGGTGCCACATTT
* *
17676904 TTCTTCGTCGGGGCA-C-CAT-CA-TCGAAGAACCTGACCGGC-AGCATTGGGGTT-C-T-GG-C
131 TTCTTCGTC-GAGCACCTCATGCACTCGAAGAACCTGACCGGCGA-CATAGGGGTTCCATCGGTC
* **
17676960 G-ATC-GGGGG-CTGGGGGG-TGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
194 GAATCGGGGGGCCGGGGGGGCTGTGCACACATGATGTGCGATGGGTGCTGGTACTCCGCCCTTAT
* * *
17677021 ATTGGCCCCCTAT-CCATCATCAAACCTTGAGAACTCACACCCCCTTCAAGAGCATTTGAGATTT
259 ATTGGCCCCCTATCCCA-CATCAAACCCTGAGAACTCACA-ACCCTTAAAGAGCATTTGAGATTT
*
17677085 TACAGGTTTGCTGCCAATAACCATTAAAGTGTCTAAAATAGGG-ACACTTTTTTCAAATGGTCAC
322 TACAGGTTTGCTGCCAATAACCATTAAAGTGTCT-AAATAGGGAACACTTTTTTCAAATGATCAC
* * * *
17677149 AAAATTTTGTAAACCTCGAGTTTTTAGCTCATTTTTTTTTTGCATGCCAACAAAAATACAAGGAT
386 AAAATCTTGTAAACCTCGAGTTTTTAGCTCAATGTTTTTGTGCATGCCAACAAAAATACAAGGAT
* **
17677214 CACATCTACCAAGTTTGGGGCCAAAA-TACCTTCTGAAAAAA-TTTAAAAAATCCTGAACCGCAA
451 CACATCTACCAAGTTTGGGGCCAAAACT-CCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAA
17677277 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTATCTTGCCATGAAACTTCACGTGAAGGCT
515 AAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTATCTTGCCATGAAACTTCACGTGAAGGCT
*
17677342 TAAAGGACCATTGTATAAATTTGCAAGCCAGAAAAATGGCATTGGCATGCAGAAATATGAAAATG
580 TAAAGGACCATTGTATAAATTTACAAGCCAGAAAAATGGCATTGGCATGCAGAAATATGAAAATG
* *
17677407 TGCCTAAACCCACCTACTACCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGTCGGCGTA
645 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTA
* * *
17677472 GTGCCTACCCGCCCACTCATTTCGTCGGATAGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
710 GTGCCCACCCGCCCACTCATTTCATCGGATAGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGA
17677537 TC
775 TC
17677539 GGACTGGACC
Statistics
Matches: 697, Mismatches: 62, Indels: 40
0.87 0.08 0.05
Matches are distributed among these distances:
880 3 0.00
881 336 0.48
882 174 0.25
883 11 0.02
885 3 0.00
888 2 0.00
891 2 0.00
893 1 0.00
895 1 0.00
898 1 0.00
899 26 0.04
902 2 0.00
907 3 0.00
909 128 0.18
910 4 0.01
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.26
Consensus pattern (892 bp):
TGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
GATCGGACCAGACCAAGGGTTGCAACAGCACATGCCGGGCTCGGCCATGTGCTGGTGCCACATTT
TTCTTCGTCGAGCACCTCATGCACTCGAAGAACCTGACCGGCGACATAGGGGTTCCATCGGTCGA
ATCGGGGGGCCGGGGGGGCTGTGCACACATGATGTGCGATGGGTGCTGGTACTCCGCCCTTATAT
TGGCCCCCTATCCCACATCAAACCCTGAGAACTCACAACCCTTAAAGAGCATTTGAGATTTTACA
GGTTTGCTGCCAATAACCATTAAAGTGTCTAAATAGGGAACACTTTTTTCAAATGATCACAAAAT
CTTGTAAACCTCGAGTTTTTAGCTCAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACAT
CTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTT
TCAAAAATCGTGAAAAATAGAAAACGAGTTATCTTGCCATGAAACTTCACGTGAAGGCTTAAAGG
ACCATTGTATAAATTTACAAGCCAGAAAAATGGCATTGGCATGCAGAAATATGAAAATGTGCCTA
AACCCACCTACCACCCTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCC
ACCCGCCCACTCATTTCATCGGATAGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCATAC
CAGATTGAGTGATGTGGTAGTAGGATCGGCAGCACGCAGAGGGGGACCCTGTCGATCCCCGACTT
GCGCATCCCACCCCTCTGGCCAGCTGACCGCATGCACATTCGTTTCA
Found at i:17679312 original size:26 final size:26
Alignment explanation
Indices: 17679276--17679328 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17679266 GTTGACTTAG
*
17679276 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17679302 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
17679328 G
1 G
17679329 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17680207 original size:26 final size:26
Alignment explanation
Indices: 17680170--17680222 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17680160 GTTGACTTAG
*
17680170 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17680196 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17680222 G
1 G
17680223 ACCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17680679 original size:896 final size:896
Alignment explanation
Indices: 17677509--17680966 Score: 4659
Period size: 890 Copynumber: 3.9 Consensus size: 896
17677499 GATAGCTTAG
** *
17677509 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * ** * * *
17677574 CTCAGTCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGA
* * * *
17677639 ACCTAACCGAC-G-ATGTTGGGGTTCCGGCAATCGGGGGGGCCGGGGGGTGTGCGCACATGATAT
131 ACCTGACCGACGGCAT-TT-GGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGT
17677702 G-TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
194 GCT-ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
17677766 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGACTAAA
258 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * * * *
17677831 ATGGGGACACTTTTTTCAAATGGTCAGAAAATCTTGTAGACTTCGAGTTTTTAGTTGATTTTTTT
323 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTT
* ** * * * * *
17677896 TGTGCATGCCAAAAAAAATACGAGTCTCACATCTTCTAAGTTTGGAGCAAAAAATCCATCTGAAA
388 TGTGCATGCCAAAAAAAATACAAGGATCAC-TCTACCAAGTTTGGAGCCAAAAATCCTTCCGAAA
* ** ** *
17677961 AAATTTTCAAAAATCTTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCATC
452 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTC
17678026 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
17678091 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACTCACCTACCACCCTATCGATCCACGGCTTG
582 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
** *
17678156 CACATCCCATCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCCCCCGCACGCTCATTTTGTCGGTTG
647 CACATCCCATCTCTCTGGCCAACGTAGTGCCCGCCCG-----CC-CACGCTCATTTCGTCGGTTG
* * *
17678221 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATT-AGACCGGACTGAGGGTTGCGACAGCAGG
706 GCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATTGA-ACCAGACTGAGGGTTGCGGCAGCAGG
* * * *
17678285 ATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGAGCATCCTG-CCCTTATGGCCGG
770 ATCGGTAGCACGCAGAGGGGGACTCGACCGATCCCCGGCTTGCGCATCCTGCCCCTT-TGGCCGG
* * * *
17678349 CTGAGTGGCCGCACGTTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
834 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** *
17678412 GCATACTTAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
17678477 CTTGGGAATGTGCTGGTGCCGTC-TTTTTCTTCG-CCGGG---CA----C----CATCACCGAAG
66 CTCGGGCATGTGCTGGTGCCG-CATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAG
* * * ** * * *
17678529 AACCTGACCGGCAGCATTGGGGTTTTGGCGATC-AGGGGGCTGGGGGGTGTGCGCACATGATGTG
130 AACCTGACCGACGGCATTTGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
17678593 CGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
195 CTATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
17678658 ACCTCCTTAAAGAGCATTTGAGATTTTACAGCTTTCCTGCCAGTAGCTATTAAAGTGTCTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
17678723 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAATTTTTAGCTGAATTTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTG
* *
17678788 TGCATGCCAACAAAAATACAAGGATCACTTCTACCAAGTTTGGAGCCAAAAATCCTTCCAAAAAA
390 TGCATGCCAAAAAAAATACAAGGATCAC-TCTACCAAGTTTGGAGCCAAAAATCCTTCCGAAAAA
** * * * *
17678853 ATTTTAAAAAAATCCCGAACCATAAAAAGTTTTGAAAATCTTAAAAAATAGAAAATGAGTCGTCT
454 ATTTT-AAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCT
* * * *
17678918 TGCTATGGAACTTCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGA
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
17678983 ATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTGC
583 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
17679047 ACATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCACCCTCTAATTTCGTCGGTTGG
648 ACATCCCATCTCTCTGGCCAACGTAG-T---GCCCGCCCGCCCACGCTC--ATTTCGTCGGTTGG
* * * * * **
17679112 CTTAGGCATACA-ATGTTCATTCCCAGTCTAAGATCGGATCGGACTGAAGGTTATGGCAGCAGGA
707 CTTAGGCATACAGA-GTTCATTCCCAGTCTAAGATTGAACCAGACTGAGGGTTGCGGCAGCAGGA
* * * * * * *
17679176 TCGATAGCACGCAAAGGGGGACTC-AGTCGATCCCCGGCTTGCCCAGCATGCCCCTCTGGCCGGC
771 TCGGTAGCACGCAGAGGGGGACTCGA-CCGATCCCCGGCTTGCGCATCCTGCCCCTTTGGCCGGC
* *
17679240 TTAGCGCCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
835 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17679302 GCATACGGAGTTCATTCCCAATCTAAGATCGGACCAGACCAAGGGTTGTGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * **
17679367 CTCGGGCATGCGCTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCACCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGA
* * * * * * * *
17679432 ACCGGA-CGGCGACATTAGGTTTCTGACGATCGGGGGGGCCGGGGGGTGTGCACACAGGATGTGC
131 ACCTGACCGACGGCATTTGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* ** **
17679496 AATGGGTGCTGGTACTTGGTGCTTATATTGGCCCCCTATCCCTTGTCAAACCTCGAGAACTCACA
196 TATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
17679561 CCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCTAGTAGCCATTAAAGTGTCTCAAATG
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
17679626 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGT
* * * *
17679691 GCATGCCAACATAAATACAAGGATCATCTCTACCAAGTTTGGGGCCAAAAATCCTCCCGAAAAAA
391 GCATGCCAAAAAAAATACAAGGATCA-CTCTACCAAGTTTGGAGCCAAAAATCCTTCCGAAAAAA
* *
17679756 TTTTGAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCTTG
455 TTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCTTG
* * *
17679821 CCATGAAACTTCACGTGAAGGGTTAAGAGACCATTGTATGAATTTACAAGACATAAAAATGGCAT
520 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * * *
17679886 TGGCACGTAGAAATATGAGGATGTGCCTAAACCCACCTAGCAACCTATCGATCCACGACTTGCGC
585 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCAC
* * * * *
17679951 ATGCCATCTCTCTGGCCAACGTAGTGCCCGCCCG-CC-TGCTCGTTTCGTCGGCTAGCTTAGGCA
650 ATCCCATCTCTCTGGCCAACGTAGTGCCCGCCCGCCCACGCTCATTTCGTCGGTTGGCTTAGGCA
* * * *
17680014 AACAGAGTTAATTCCCAGTCTAAGATTGAACCAGACTGAGGGTTGGGGCAGCAGTATCGGTAGCA
715 TACAGAGTTCATTCCCAGTCTAAGATTGAACCAGACTGAGGGTTGCGGCAGCAGGATCGGTAGCA
* * *
17680079 CGCAGAGGGGTACTCGACCGATCCTCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAGCGCCCG
780 CGCAGAGGGGGACTCGACCGATCCCCGGCTTGCGCATCCTGCCCCTTTGGCCGGCTGAGCGCCCG
17680144 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
845 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
17680196 GCATACGAAGTTCATTCCCAGTCTAAGACCGGACCGGTCCGAGGGTTACGACAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
17680261 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGA
*
17680326 ACTTGACCGACGGCATTTGGGTTCCGACGATC-GGGGGGCCGGGGGGGCTGTGCGCACATGATGT
131 ACCTGACCGACGGCATTTGGGTTCCGACGATCGGGGGGGCC-GGGGGG-TGTGCGCACATGATGT
* *
17680390 GCTATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCTCTCATCAAACCTCGAGAACTCA
194 GCTATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
17680455 CACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCATTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
17680520 TGGGGACGCTTTTTTCAAATGGTCACAAAATCTTGTACACATCAAGTTTTTAGCTAAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTT
* * * *
17680585 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAATTTGGGGACAAAAGTCCTTCCGAAAA
389 GTGCATGCCAAAAAAAATACAAGGATCAC-TCTACCAAGTTTGGAGCCAAAAATCCTTCCGAAAA
* * * *
17680650 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACAAGTCGTCT
453 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCT
*
17680715 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTGCAAGCCATAAAAATGG-
518 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
17680779 ATTTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTCG
583 A-TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
** * * * * *
17680844 TGCATCCCGTCTCTCTGG-CAGGCGTAGTGCCCTCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCT
647 CACATCCCATCTCTCTGGCCA-ACGTAGTGCCCGCCCGC-C-CACGCTCATTTCGTCGGTTGGCT
* * *
17680908 TAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGGCAGCA
709 TAGGCATACAGAGTTCATTCCCAGTCTAAGATTGAACCAGACTGAGGGTTGCGGCAGCA
17680967 CATTCTGGGC
Statistics
Matches: 2240, Mismatches: 272, Indels: 89
0.86 0.10 0.03
Matches are distributed among these distances:
888 6 0.00
889 5 0.00
890 554 0.25
891 197 0.09
892 2 0.00
893 2 0.00
894 310 0.14
895 33 0.01
896 456 0.20
897 2 0.00
898 11 0.00
899 3 0.00
900 71 0.03
901 182 0.08
902 320 0.14
903 85 0.04
904 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (896 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGGAGA
ACCTGACCGACGGCATTTGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
TATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGT
GCATGCCAAAAAAAATACAAGGATCACTCTACCAAGTTTGGAGCCAAAAATCCTTCCGAAAAAAT
TTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCTTGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACA
TCCCATCTCTCTGGCCAACGTAGTGCCCGCCCGCCCACGCTCATTTCGTCGGTTGGCTTAGGCAT
ACAGAGTTCATTCCCAGTCTAAGATTGAACCAGACTGAGGGTTGCGGCAGCAGGATCGGTAGCAC
GCAGAGGGGGACTCGACCGATCCCCGGCTTGCGCATCCTGCCCCTTTGGCCGGCTGAGCGCCCGC
ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:17681566 original size:715 final size:716
Alignment explanation
Indices: 17680196--17681685 Score: 2261
Period size: 715 Copynumber: 2.1 Consensus size: 716
17680186 CCCAGTCTAA
* ** * * *
17680196 GCATACGAAGTTCATTCCCAGTCTAAGACCGGACCGGTCCGAGGGTTACGACAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGACAGCACATGTTGGG
*
17680261 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGGAGA
** * *
17680326 ACTTGACCGACGGCATTTGGGTTCCGACGATCGGGGGGCCGGGGGGGCTGTGCGCACATGATGTG
131 ACCGGACCGACGGCATTAGGGTTCCGACGATCGGGGGGCCAGGGGGGCTGTGCGCACATGATGTG
* *
17680391 CTATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCTCTCATCAAACCTCGAGAACTCAC
196 CTATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTCAC
* * *
17680456 ACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCATTAGCCATTAAAGTGTCTGAAAT
261 ACCCCCATAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAAT
* * *
17680521 GGGGACGCTTTTTTCAAATGGTCACAAAATCTTGTACACATCAAGTTTTTAGCTAAATTTTTTTG
326 GGAGACACTTTTTTCAAATGGCCACAAAATCTTGTACACATCAAGTTTTTAGCTAAATTTTTTTG
* * ** * *
17680586 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAATTTGGGGACAAAAGTCCTTCCGAAAAA
391 TGCATACCAAAAAAAATACAAGGATCACATCTACCAAATTTGGCAAAAAAACTCCTTCCGAAAAA
* * *
17680651 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACAAGTCGTCTT
456 ATTTTAAAAAATCCCGAACCGCAAAAAATTTTGAAAATCATGAAAAATAGAAAACAAGTCGTCTT
*
17680716 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTGCAAGCCATAAAAATGGAT
521 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGAT
* * * * *
17680781 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTCGTG
586 TTGGCATGCAGAAATATAAAGATGTGCCGAAACCCACCTACCACCCTATCGATCCACAGCTCGCG
* *
17680846 CATCCCGTCTCTCTGGCAGGCGTAGT-GCCCTCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTA
651 CATCCCGTCTCTCTGGCAGACGTAGTCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTA
17680910 G
716 G
*
17680911 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGGCAGCACAT-TCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGACAGCACATGT-TGG
** * * * **
17680975 GCTTTGGCATGTGCTGGTGTCGCATTTTTCTTCGTCGGGGTACCATCGCCGGAGCATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGGAG
*
17681040 AACCGGACCGACGGCATTAGGGTTCTGACGATCGGGGGGGCCAGGGGGGCTGTGCGCACATGATG
130 AACCGGACCGACGGCATTAGGGTTCCGACGATC-GGGGGGCCAGGGGGGCTGTGCGCACATGATG
* *
17681105 TGCTATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTC
194 TGCTATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTC
* *
17681170 ACA-CCCCTTAAAGATCATTCGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAA
259 ACACCCCCATAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAA
* * *
17681234 ATGGAGACACTTTTTTCAAATGGCCACAAAATCTTGTACACTTCGAGTTTTTAGCT-GATTCTTT
324 ATGGAGACACTTTTTTCAAATGGCCACAAAATCTTGTACACATCAAGTTTTTAGCTAAATT-TTT
* * *
17681298 TTGTGCATACCAACAAAAATACAAGGATCGCATCTACCAAGTTTGGCAAAAAAACTCCTTCCGAA
388 TTGTGCATACCAAAAAAAATACAAGGATCACATCTACCAAATTTGGCAAAAAAACTCCTTCCGAA
* **
17681363 AAAATTTTAAAAAATCCTGAACCGCAAAAAATTTTGAAAATCATGAAAAATAGAAAATGAGTCGT
453 AAAATTTTAAAAAATCCCGAACCGCAAAAAATTTTGAAAATCATGAAAAATAGAAAACAAGTCGT
*
17681428 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATG
518 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
17681493 GCA-TTGGCATGCAGAAATATAAAGATGTGCCGAAACCCACCTACCACCCTATCGATCCACAGCT
583 G-ATTTGGCATGCAGAAATATAAAGATGTGCCGAAACCCACCTACCACCCTATCGATCCACAGCT
* * *
17681557 TGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTTGTCGGT
647 CGCGCATCCCGTCTCTCTGGCAGACGTAGT---CGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGT
17681622 TGGCTTAG
709 TGGCTTAG
* * * * ** *
17681630 GCATACGGAGTTCATTCACAATCTAAGATTAGACCAAAGTGAGGGTTGCGATAGCA
1 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGACAGCA
17681686 GGATCAATAG
Statistics
Matches: 697, Mismatches: 70, Indels: 12
0.89 0.09 0.02
Matches are distributed among these distances:
714 4 0.01
715 513 0.74
716 95 0.14
719 85 0.12
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (716 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGCGACAGCACATGTTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCACCGGAGA
ACCGGACCGACGGCATTAGGGTTCCGACGATCGGGGGGCCAGGGGGGCTGTGCGCACATGATGTG
CTATGGGTGCTGCTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCATAAAGAGCATTCGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAAT
GGAGACACTTTTTTCAAATGGCCACAAAATCTTGTACACATCAAGTTTTTAGCTAAATTTTTTTG
TGCATACCAAAAAAAATACAAGGATCACATCTACCAAATTTGGCAAAAAAACTCCTTCCGAAAAA
ATTTTAAAAAATCCCGAACCGCAAAAAATTTTGAAAATCATGAAAAATAGAAAACAAGTCGTCTT
GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGAT
TTGGCATGCAGAAATATAAAGATGTGCCGAAACCCACCTACCACCCTATCGATCCACAGCTCGCG
CATCCCGTCTCTCTGGCAGACGTAGTCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTA
G
Found at i:17681826 original size:26 final size:26
Alignment explanation
Indices: 17681789--17681840 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
17681779 GTTGACCTAG
*
17681789 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17681815 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17681841 AATCAGACCG
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.25, G:0.17, T:0.29
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17683434 original size:26 final size:26
Alignment explanation
Indices: 17683398--17683450 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17683388 GTTGACTTAG
*
17683398 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17683424 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17683450 G
1 G
17683451 ATCGAACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17684339 original size:26 final size:26
Alignment explanation
Indices: 17684301--17684353 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17684291 GTTGACTTAG
17684301 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17684327 GCATACGGGGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17684353 G
1 G
17684354 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17684460 original size:903 final size:903
Alignment explanation
Indices: 17682527--17686173 Score: 4933
Period size: 902 Copynumber: 4.0 Consensus size: 903
17682517 GTTGGCTTAG
* * * * * * ** *
17682527 GCATACGGAGTTTAGTACCAGTCTAAGATCAGACCAGACCGATGGTTACGGTAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGG
* *
17682592 CTCGGGCATGTGCTGTTGCCGCATTTTTCTTCGCCAGGGCACCATCGTCGGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCACCGGAGA
*** * * *
17682657 ACCTAACCGACGGCGGCGGAGGTTCCGACGATCGGGGGGGCTGGGGGGTGTGCGCACATGATGTG
131 ACCTAACCGACGGCATTGG-GGTTCCGACGATCGGAGGGGCCGGGGGGTGTGCACACATGATGTG
* * *
17682722 CAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGACAACTCAC
195 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
17682787 ACCCCCTTAAAGAGCATTTGAGATGTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * * *
17682852 GGGGACACTTTGTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTACCTGATTTTTTTTG
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGATATTTTTTG
* **
17682917 TGCATGACAACAAAAATACAAGGACCACGTCTACCAAGTTTGTTGCCAAAACTCCTTCCGAAAGA
390 TGCATGACAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA-A
* * *
17682982 ATTTTAAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCC
454 AATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * * * * *
17683047 TACCATGAAACTTCACGTGAAGGCTTAAGGAAACACTGTATGAATTTACAGGCCATAAAGATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
17683112 ATTGGCATGCATG-AATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTG
584 ATTGGCATGCA-GAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
17683176 CGTATCCCGTCTCTCTGGCCGACGTAGT----GCCCG--C-C-CGACCGCTCATTTCATC-GATT
648 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCATTTCGTCAG-TT
** * *
17683232 GGCTTAGGCATACGGAGTTCATT-CTCAGTCTAAGATCATACCGGATCGAAGGTTACGGTAGTAG
712 GGCTTAGGCATACGGAGTTCATTCCT-AGTCTAAGATCGGACCGGACCGAGGGTTACGGTAGTAG
* * * * *
17683296 GATCGATAGCACGCAAAAGGGGACCCGACCAAACCCCGACTTGCTCATCTCGCCCCTCTGGCCGG
776 GATCGATAGCACGCAAAGGGGGACCCGATCGATCCCCGACTTGCTCATCCCGCCCCTCTGGCCGG
* *
17683361 CTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAA
841 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17683424 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACCGGACCGAGGTTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGG
* * * * *
17683489 CTCGGGCATGTGCTGGTGTCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATTACCGAAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCACCGGAGA
* * *
17683554 ACCTAACCGACGGCATTGGGGTTCCGACGATCGG-GGGTACCGGGGGGGTGTACGCACATGATGT
131 ACCTAACCGACGGCATTGGGGTTCCGACGATCGGAGGG-GCC-GGGGGGTGTGCACACATGATGT
*
17683618 ACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
194 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
17683683 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTTAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
17683748 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGA-ATTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGATATTTTTT
* * **
17683812 ATGCATGCCAACAAAAATACAAGGATCACGTCTAAAAAGTTTGGGGCCAAAACTCCTTCCGAAAA
389 GTGCATGACAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * *
17683877 AATTTAAAAAAATCTTGAACCGTAAAAGGTTTCAAAAATCGTGAAAAATAGAAAACGAATCGTCT
454 AATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
*
17683942 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTGTGAATTTACAAGCCATAAAAATGGC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
17684007 ATTGGCATGCAGAAATATGAAGATGTGTCGAAACCCACCTACCACCCTATCGATCCACGGCTTGC
584 ATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
17684072 GCATCCCGTCTCTCTGGCCGGCGTCGTGCCCGCCCGCCCGCTCGCCTGCTCATCTCGTCAGTTGG
649 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCATTTCGTCAGTTGG
* * * * * ** *
17684137 CTTAGGGATACGGAGTTCATTCCTAATCTAAGATCGGACTGGATCGGGGGTTGTGGCAGTAGGAT
714 CTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTACGGTAGTAGGAT
* * *
17684202 CGGTAGCACGTAAAGGGGGACCCGATCGATCCCC-AGCTTGCTCATCCTGCCCCTCTGGCCGGCT
779 CGATAGCACGCAAAGGGGGACCCGATCGATCCCCGA-CTTGCTCATCCCGCCCCTCTGGCCGGCT
* *
17684266 GAGCGCCCGCACGCTTGTTTCTTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
17684327 GCATACGGGGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGG
* * * * * *** *
17684392 CTCGGGCATATGTTGGTGCCACATTTTTCTTCACCGGGGCACTATTACCAGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCACCGGAGA
* * * * * *
17684457 ACCTGACCGACGACATTGGCGATCCGATGATCGGAGGGGCCGGGGGGTGTGCACAAATGATGTGC
131 ACCTAACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCCGGGGGGTGTGCACACATGATGTGC
* * *
17684522 GATGGGTACTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTTATCAAACCTCGAGAACTCACA
196 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * * *
17684587 CCCCCTTAAAGAGCATTTGAGATTTTACAGCTTTGATGCTAGTAGCCATTAAAGTGTCTGAAATC
261 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
17684652 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTATACTTCAAGTTTTTAGCTGATGTTTTTTTT
326 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGATATTTTTTGT
* * * * *
17684717 GCATGAGAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCATTTCGAAAAAA
391 GCATGACAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * **
17684782 TTT-TAAAAATCTTGAATTGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
456 TTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
*
17684846 CCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGGCAT
521 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
17684911 TGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
586 TGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * *
17684976 ATCCCGTCTCTCTGGCCGGCGTCA-TGCCCGCACGCCCGTCTGCCCGCCCGCTCGTTTCATCGGT
651 ATCCCGTCTCTCTGGCCGACGT-AGTGCCCGCCCGCCCG-CT---CGCCCGCTCATTTCGTCAGT
* * * *
17685040 TGGCTTAGGAATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGACCGAGGGTTACGATAGTAG
711 TGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTACGGTAGTAG
* * * * * * *
17685105 GATCAACAGCACGTAGAGGGGGACCC-AGTCGATCCTCGGCTTG-TACATCCCACCCCTCTGGCC
776 GATCGATAGCACGCAAAGGGGGACCCGA-TCGATCCCCGACTTGCT-CATCCCGCCCCTCTGGCC
* * * * *
17685168 GGCTGAGTGCCCGCGCGCTCGTTTCATTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTTTAA
839 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
17685233 GCATACGGAGTTCATTCCCAGTTTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGATCCAAAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C---G---G------AC
* * * * *
17685298 CGAGGGTTACGATAGCACATGTTGGGCT-GGGCATGTGCTGGTTCCGTA-TTTTCTTCGTCGGGG
40 CGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG
* * ** *
17685361 CACCATCGTCGGAGCATCGCTGGAGAACCTAACCGACGGCATTGGGGTTCTAACGATCGGACGGG
105 CACCATCGTCGGAGCATCACCGGAGAACCTAACCGACGGCATTGGGGTTCCGACGATCGGAGGGG
* *
17685426 CCGGGGGGTGTGCACACATGATGCGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
170 CCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
17685491 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
235 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
17685556 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
300 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* * *
17685621 TCGAGTTTTTAGCTGA-AGGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
365 TCAAGTTTTTAGCTGATA-TTTTTTGTGCATGACAACAAAAATACAAGGATCACGTCTACCAAGT
** * * **
17685685 TTCAGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACAGTAAAAAGTTTGGAAAATC
429 TTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATC
*
17685750 ATGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
494 ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * * * *
17685815 TGAATTTACAACCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAATCCCACCA
559 TGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCT
* * * * * *
17685880 ACCGCCTTATCGATCCACGGCTTGCGCATCCCATCTCCCTGGCCGACGAAGTGCCCGCTCGCCCG
624 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCG
* * * * * *
17685945 CCCTCCCGCTCGTTTCGTTAGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATTGGACC
689 CTCGCCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACC
* * * * * **
17686010 AGACCGAGGGTTGCGGTAGCAGGATCGGTAGCACGCAGAGGGGGACCCGATCGATCGTCGACTTG
754 GGACCGAGGGTTACGGTAGTAGGATCGATAGCACGCAAAGGGGGACCCGATCGATCCCCGACTTG
* *
17686075 CTCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATAC
819 CTCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC
* *
17686140 AGAGTTCATTTCCAGTCTAA
884 GGAGTTCATTCCCAGTCTAA
17686160 GCATACGGAGTTCA
1 GCATACGGAGTTCA
17686174 GTCTAAGATC
Statistics
Matches: 2417, Mismatches: 278, Indels: 80
0.87 0.10 0.03
Matches are distributed among these distances:
894 1 0.00
895 203 0.08
896 79 0.03
897 326 0.13
899 5 0.00
901 1 0.00
902 413 0.17
903 391 0.16
904 6 0.00
905 2 0.00
906 204 0.08
907 2 0.00
908 1 0.00
909 1 0.00
910 1 0.00
913 1 0.00
917 1 0.00
920 1 0.00
923 1 0.00
926 1 0.00
927 194 0.08
928 2 0.00
930 330 0.14
931 222 0.09
932 28 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (903 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCACCGGAGA
ACCTAACCGACGGCATTGGGGTTCCGACGATCGGAGGGGCCGGGGGGTGTGCACACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGATATTTTTTGT
GCATGACAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
TTTAAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCCGCTCATTTCGTCAGTTGGCT
TAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTACGGTAGTAGGATCG
ATAGCACGCAAAGGGGGACCCGATCGATCCCCGACTTGCTCATCCCGCCCCTCTGGCCGGCTGAG
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:17685238 original size:26 final size:26
Alignment explanation
Indices: 17685207--17685285 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
17685197 GTTGACTTAG
17685207 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTTTAA
17685233 GCATACGGAGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTTTAA
*
17685259 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTTTAA
17685285 G
1 G
17685286 ATCGATCCAA
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.27, C:0.24, G:0.20, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTTTAA
Found at i:17686215 original size:179 final size:179
Alignment explanation
Indices: 17685994--17686352 Score: 499
Period size: 179 Copynumber: 2.0 Consensus size: 179
17685984 GTTCATTCCT
** * * *
17685994 AGTCTAAGATTGGACCAGACCGAGGGTTGCGGTAGCAGGATCGGTAGCACGCAGAGGGGGACCCG
1 AGTCTAAGATCAGACCAGACCAAGGGTTGCGGCAGCAGGATCGATAGCACGCAGAGGGGGACCCG
** * * *
17686059 ATCGATCGTC-GACTTGCTCATCCCGCCCCTCTGGCC-GACTGAGCGCCCGCACGCTCATTTCGT
66 ATCGATCCCCAG-CTTGCTCATCCCGCCCCTCTGGCCAG-CCGAGCACCCGCACACTCATTTCGT
17686122 GGGTTGACTTAGGCATACAGAGTTCATTTCC-AGTCTAAGCATACGGAGTTC
129 GGGTTGACTTAGGCATACAGAGTTCA-TTCCTAGTCTAAGCATACGGAGTTC
* * * *
17686173 AGTCTAAGATCAGACCGGACCAAGGGTTGTGGCAGCAGGATCGATAGCACGTAGATGGGGACCCG
1 AGTCTAAGATCAGACCAGACCAAGGGTTGCGGCAGCAGGATCGATAGCACGCAGAGGGGGACCCG
* *
17686238 ATCGATCCCCAGCTTGCTCATCTCGCCCCTCTGGCCAGCCGAGCACCCGCACACTCATTTTGTGG
66 ATCGATCCCCAGCTTGCTCATCCCGCCCCTCTGGCCAGCCGAGCACCCGCACACTCATTTCGTGG
* * *
17686303 GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATATGGAGTTC
131 GTTGACTTAGGCATACAGAGTTCATTCCTAGTCTAAGCATACGGAGTTC
17686352 A
1 A
17686353 TTCCCAGTCT
Statistics
Matches: 158, Mismatches: 19, Indels: 6
0.86 0.10 0.03
Matches are distributed among these distances:
178 4 0.03
179 152 0.96
180 2 0.01
ACGTcount: A:0.21, C:0.28, G:0.28, T:0.22
Consensus pattern (179 bp):
AGTCTAAGATCAGACCAGACCAAGGGTTGCGGCAGCAGGATCGATAGCACGCAGAGGGGGACCCG
ATCGATCCCCAGCTTGCTCATCCCGCCCCTCTGGCCAGCCGAGCACCCGCACACTCATTTCGTGG
GTTGACTTAGGCATACAGAGTTCATTCCTAGTCTAAGCATACGGAGTTC
Found at i:17686349 original size:26 final size:26
Alignment explanation
Indices: 17686313--17686365 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17686303 GTTGGCTTAG
*
17686313 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17686339 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17686365 G
1 G
17686366 ATCGGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17687899 original size:894 final size:894
Alignment explanation
Indices: 17686172--17689545 Score: 4777
Period size: 894 Copynumber: 3.8 Consensus size: 894
17686162 ATACGGAGTT
* * * ** * * * ** *
17686172 CAGTCTAAGATCAGACCGGACCAAGGGTTGTGGCAGCAGGATCGATAGCACGTAGATGGGGACCC
1 CAGTCTAAGATTAGAACAGACTGAGGGTTGCGACAGCAGGATCGACAGCACACAGAGGGGGACCC
** * * * * * ** *
17686237 GATCGATCCCC-AGCTTGCTCATCTCGCCCCTCTGGCCAGCCGAGCACCCGCACACTCATTTTGT
66 GGCCGATCCCCGA-CTTGCGCATCCCGCCTCTCTGGCCGGCTGAGCACCCGCATGCTCATTTCGT
* * * *
17686301 GGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAG
130 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAG
* * * * *
17686366 ATCGGACCGAACCAAGGGTTGCAGCAGCACATGCTGGGCT-GGGCATGTGCTGGTGCCGCATTTT
195 ATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTT
* * * * * *
17686430 TCTTCGTCGGGGTACCATCGTTGAAGCATCGCTAGAGAACCTGACCGACGGCATTGGGGTTCCGA
260 TCTTCGCCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGACAGCATTGGGGTTCCGA
17686495 CGATC-GGGTGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
325 CGATCAGGG-GGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
*
17686559 ATTGGCCCCCTATCTCTCATCAAACCTAGAGAACTCACACCCCCCTAAAGAGCATTTGTGATTTT
389 ATTGGCCCCCTATCCCTCATCAAACCTAGAGAACTCACACCCCCCTAAAGAGCATTTGTGATTTT
*
17686624 ACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
454 ACAGGTTTGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
17686689 AATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGATCA
519 AATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGATCA
* **
17686754 CGTCTACCAAGTTTGGGGCGAAAACTCTTTTCAAAAAAATTTTAAAAAATCCCGAACCAAAAAAA
584 CGTCTACCAAGTTTGGGGCGAAAACTCTTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAA
17686819 TTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
649 TTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* *
17686884 GGACTGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCC
714 GGACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCC
* *
17686949 TAAACCCACCTATCACCTTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCGACGTAGTGC
779 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCGACGTAGTGC
*
17687014 CCGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
844 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* *
17687065 CAGTCTAAGATTAGATCAGACTGAGGGTTGCAACAGCAGGATCGACAGCACACAGAGGGGGACCC
1 CAGTCTAAGATTAGAACAGACTGAGGGTTGCGACAGCAGGATCGACAGCACACAGAGGGGGACCC
* * * *
17687130 GGCTGATCCCCGACTTGCGCATCCCGCCTCTCTGGCCGGTTGAGCGCCCGCACT-CTCGTTTCGT
66 GGCCGATCCCCGACTTGCGCATCCCGCCTCTCTGGCCGGCTGAGCACCCGCA-TGCTCATTTCGT
*
17687194 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGAAGTTCATTCCCAGTCTAAG
130 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAG
* * * * * * **
17687259 ATCAGACCGGATCGAGGGTTGCGGTAGCACATGCTGGGCTCAGGCTTATGCTGGTACCATGTTTT
195 ATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTT
** * * * * * *
17687324 TCTTCGCCAAGGCACTATCGTCGGAGCATCACCGGAGAACCTGACTGACAGCATTGGGGTTTCGG
260 TCTTCGCCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGACAGCATTGGGGTTCCGA
* * * *
17687389 CGATCGGGGGGGTCGGGGGGTCTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
325 CGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
17687454 TTGGCCCCCTATCTCTCATCAAACCTAGAGAACTCACACCCCCCTAAAGAGCATTTGTGATTTTA
390 TTGGCCCCCTATCCCTCATCAAACCTAGAGAACTCACACCCCCCTAAAGAGCATTTGTGATTTTA
*
17687519 CAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
455 CAGGTTTGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
*
17687584 ATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGATCAT
520 ATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGATCAC
* * *
17687649 GTCTACCAAGTTTGGGGTGAAAACTCTTTTCGAAAAAATTTTAAAAAATCCTGAATCGCAAAAAT
585 GTCTACCAAGTTTGGGGCGAAAACTCTTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAT
*
17687714 TTTGAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
650 TTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * *
17687779 GACCGTTGTATGAATTTACAAGCCATAAAAATGGCTTTGGCACGCAAAAATATGAAGATGTGCCT
715 GACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCT
*
17687844 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCGACGAAGTGCC
780 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCGACGTAGTGCC
*
17687909 CGCCCGCACACCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCC
845 CGCCCG----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* * *
17687963 TAGTCTAAGATT-GAACTAGACTGAGGGTTGTGACAGCAGGATC-AGCAGCACACAGAGGGAGAC
1 CAGTCTAAGATTAGAAC-AGACTGAGGGTTGCGACAGCAGGATCGA-CAGCACACAGAGGGGGAC
* * * * * *
17688026 CAGACCGATCCCCGGCTTGCGCATCCTGCCTCTCTGGCCGGCTGACCACCCGCATGCTCGTTTCG
64 CCGGCCGATCCCCGACTTGCGCATCCCGCCTCTCTGGCCGGCTGAGCACCCGCATGCTCATTTCG
*
17688091 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCGGTCTAA
129 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAA
* * * * * *
17688156 GATCGGACCAGATCGAGGGTTGTGACAGCACATGCTGGGCTC-GAGCATGTGCTGGTGCCGCTTT
194 GATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAG-GCATGTGCTGGTGCCACATT
** * * *
17688220 TTTCTTCATCGGGGCACCATCGCCGGAGCATCGCCGGA-AACCTGACCAACAGCATT-GGGTTCC
258 TTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGACAGCATTGGGGTTCC
** ** *
17688283 GGTGATCAGGGGGGCC-GGGGG-GTGCGTGCATGATGTGCGATGGGTGCCGGTACTTGGCCCTTA
323 GACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* * * * *
17688346 TATTGGCCCTCTATCCCTCATCAAACCTCG-GCAACTCACTCCCCCTTAAAGAGCATTTGAGATT
388 TATTGGCCCCCTATCCCTCATCAAACCTAGAG-AACTCACACCCCCCTAAAGAGCATTTGTGATT
* * *
17688410 TTACAGGTTTGCTACTAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCAC
452 TTACAGGTTTGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
*
17688475 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGAT
517 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGAT
* * * * **
17688540 CACGTCTACCATGTTTGGGGCGAAATCTCTGTCCGAAAAAAATTTT-AAAAATCTTGAACCGCAA
582 CACGTCTACCAAGTTTGGGGCGAAAACTCTTTTCG-AAAAAATTTTAAAAAATCCCGAACCGCAA
17688604 AAATTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
646 AAATTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
* *
17688669 AAGGGACCGTTCTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGT
711 AAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGT
* * * * *
17688734 GCCTAAACCCACCTACCACCCTGTCGATCCACAGCTTGCGCATCCCATTTCTCTGGCCGACGTAG
776 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCGACGTAG
* * *
17688799 TGCCTGCCTGCCCGCTCGTTTCGTCGGTTGGCTTGGGCATACGGAGTTCATTCC
841 TGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
* * * * ** * * * *
17688853 CAGCCTAAGATCAGACCGGA-TCGAGGGTTGCGGTAGCAGGATCGACAACTCGCAAAGGGGGACC
1 CAGTCTAAGATTAGAACAGACT-GAGGGTTGCGACAGCAGGATCGACAGCACACAGAGGGGGACC
** * * * * * *
17688917 TAGCCGATCCCCGGCTTGCGCATCCCGACC-CTTTGGCAGGCTAAGCGCCCACATGCTCATTTCG
65 CGGCCGATCCCCGACTTGCGCATCCCG-CCTCTCTGGCCGGCTGAGCACCCGCATGCTCATTTCG
* *
17688981 TGGGTTGACTTAGGCATACGGAGTTCATTACCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
129 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAA
* * *
17689046 GATCGGACCGGACCTAGGGTTGTGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGTCACATTT
194 GATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTT
* * * * *
17689111 TTCTTCGCTGGGGCACCATAGTCGGAGCATCGCTAGAGAACCTGACCGGCGGCATTGGGGTTCCG
259 TTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGACAGCATTGGGGTTCCG
* * *
17689176 ACGATTAGGGGGGTCGGAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAGTTGGCCCTT
324 ACGATCAGGGGGG-CCG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* * *
17689241 ATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGCGATT
387 ATATTGGCCCCCTATCCCTCATCAAACCTAGAGAACTCACACCCCCCTAAAGAGCATTTGTGATT
* * *
17689306 TTACAGGTTTGCTACCAGTAGCCATTAAAGTGCCTGAAATGGGAACACTTTTTTCAAATGGTCAC
452 TTACAGGTTTGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
* * *
17689371 AAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAATAAAAACACAAGGAT
517 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGAT
* * * * *
17689436 CATGTCTACTAAGTTTGGGGCCAAAACT-TCTTCTGAAAAAATTTTACAAAATCCCGAACAC-CA
582 CACGTCTACCAAGTTTGGGGCGAAAACTCTTTTC-GAAAAAATTTTAAAAAATCCCGAAC-CGCA
* * * * *
17689499 AAAAGTTTTGAAAATCGTGAAAAACAG-AAATGACTCATCTTGCCATG
645 AAAA-TTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
17689546 TCCGTCTCTC
Statistics
Matches: 2217, Mismatches: 234, Indels: 57
0.88 0.09 0.02
Matches are distributed among these distances:
889 1 0.00
890 283 0.13
891 22 0.01
892 18 0.01
893 199 0.09
894 1026 0.46
895 36 0.02
896 294 0.13
897 44 0.02
898 294 0.13
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (894 bp):
CAGTCTAAGATTAGAACAGACTGAGGGTTGCGACAGCAGGATCGACAGCACACAGAGGGGGACCC
GGCCGATCCCCGACTTGCGCATCCCGCCTCTCTGGCCGGCTGAGCACCCGCATGCTCATTTCGTG
GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGA
TCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTT
CTTCGCCGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGACAGCATTGGGGTTCCGAC
GATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
TGGCCCCCTATCCCTCATCAAACCTAGAGAACTCACACCCCCCTAAAGAGCATTTGTGATTTTAC
AGGTTTGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAA
TCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAACACAAGGATCACG
TCTACCAAGTTTGGGGCGAAAACTCTTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAATT
TTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
ACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTA
AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGCCGACGTAGTGCCC
GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC
Found at i:17688133 original size:26 final size:26
Alignment explanation
Indices: 17688104--17688156 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17688094 GTTGACTTAG
*
17688104 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17688130 GCATACGAAGTTCATTCCCGGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17688156 G
1 G
17688157 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17689030 original size:26 final size:26
Alignment explanation
Indices: 17688994--17689046 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17688984 GTTGACTTAG
17688994 GCATACGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
*
17689020 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
17689046 G
1 G
17689047 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:17689807 original size:26 final size:26
Alignment explanation
Indices: 17689771--17689821 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
17689761 GTTGACTTAG
17689771 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17689797 GCATATGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
17689822 CGATCGGACT
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.25, G:0.20, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17691335 original size:901 final size:900
Alignment explanation
Indices: 17689547--17698478 Score: 11388
Period size: 900 Copynumber: 10.0 Consensus size: 900
17689537 CTTGCCATGT
* * *** * *
17689547 CCGTCTCTCTAGCCGACGTAGTGCCCGCCCGCGCGCCCGTTTGCTCGTTTCGTCAGTTGGCTTGG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGC-CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * *
17689612 GCATACGGAGTTTATTCCCAGTCTAAGATC-GAACCGAACTGAGGGTTACGGCAGCAGGATCGAC
65 GCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGAACTGAGGGTTGCGGCAGCAGGATCGGC
* * * * * * *
17689676 AGTACACAGATGGGGATCCGACCGATCCCCGGCTTGTGCATCCTGCCCCTCTAGCCGACTGAGCG
129 AGCACACAGA-GGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * *
17689741 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGA
193 -CTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGA
* * ** ** * *
17689806 GTTCATTCCCAGTCTACGATCGGACTGGACCGAGGGTTATGGTAACACATGCTGGGGTCGGGCAT
257 GTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* * * ** * *
17689871 GTGTTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGTTGGAGAACCTGATCG
322 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCG
* * * * * * *
17689936 GCGGCATTGGGGTTCCGGCGTTCAGAGGGGCCGGGGGGGTGTGCGCACATAATATGCGATGAGTG
387 ACGGCATTGGGGTTCCAGCGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * **
17690001 CTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTTGACTACTCACACCCCCTTA
451 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
*
17690066 AAGAGCATTTGAGATTTTACAGGTTTGCTGGCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
516 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* *
17690131 TTTTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTTTAGTTGAATTTTTTTGTGCATGCCA
581 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * * *
17690196 TCAAAAATACAAGGATCAAGTCTACCAGGTTTGAGGCCAAAATTGCATT-CGAAAAAATTTT-AA
646 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAT-CTTTCCGAAAAAATTTTAAA
* *
17690259 AAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
710 AAATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* *
17690324 ACTTCACGTGAAGGCTTAAGGGACGAATGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
775 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
17690389 TAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATC
840 TAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* *
17690450 CCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCCTGCTCGTCCGCTCGTTTCGTCGGTTGGCTTAG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* ** * * * *
17690514 GCATACGGATTTCATTCCCAGTCTAAGATCAGACCGTTCTGGGGGTTGCGGTAGTAGGATCAGCA
65 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGCGGCAGCAGGATCGGCA
** * * * *
17690579 GCACACAGAGGGGAACCCGGCCGATCCCCGGCTTGCGTATCCTGCCCTTCTGGCCGACTGAGCAG
130 GCACACAGAGGGG-ACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC-G
* * * *
17690644 CTGCAC-CGTCATTTCGTGGGTTGACTTACGCATACATAGTTCATTTCCAGTCTAAGCATACGGA
193 CTGCACGC-TCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * * * ** * *
17690708 GTTCATTCCCAGTCTGAGATCAGACCAGACTGAGGGTTGTGGCAGCACATGCTAAGCTCAGGCTT
257 GTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* **
17690773 GTGCTGGTGCCACATTTTTCTTCACCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCG
322 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCG
* * * * * * * *
17690838 ACAGCATTGGGGTTCCGGCGATCGGGGGGTCAGGGGGGTTTGCGCACATGATGTGCGCTAGGTAC
387 ACGGCATTGGGGTTCCAGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
*
17690903 TGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
452 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
*
17690968 AGAGCATTTGACATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
517 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * *
17691033 TTTTCAAATGATCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCTAA
582 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * *
17691098 CAAAAATACAAGGATCATGTC-ACCATGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAA
647 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAAAAA
* *
17691162 ATCTCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAATACGAGTCGTCTTGCCATGAAAC
712 ATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* **
17691227 TTCACGTGAAGGCTTAAGCGACCATTGTATGAATTTACAAGCCATAAAAATACCATTGGCATGTA
777 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTA
* *
17691292 GAAATATGAAGATGTGCATAAACCCACCTACCACCCAATCGATCCACGGCTTGCGCATC
842 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * * *
17691351 CAGTCTCTCTGGTCGGAGTAGTGCCCG--C-CCGCCCGCACGCTTGTTTCATCGGTTGGCTTAGG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
** * * * * * * * * *
17691413 CATACGGAGTTCATTCGTAGTTTATGATC-GAACAGGACTGAGAGTTGTGACAGCAGGATTGGTA
66 CATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGAACTGAGGGTTGCGGCAGCAGGATCGGCA
* * * * * * * *
17691477 GCACGCAGAAGGGGACCCGGTTGATCCCCGACTTGTGCATCCCGCCCCTCTTGTCGGCTGAGCAC
130 GCACACAG-AGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC-G
* * * *
17691542 CCGCACACTTGTTT--T--G-TG-----GG--T--TG-G--C-TT---AG----A-CATACGGAG
193 CTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAG
17691581 TTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATG
258 TTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATG
* * * * ** * *
17691646 TGCTGGTGCCGCATTTTTCTTCGCCGGGGCATCATC-ATCAAAGCATCGCCAGAGAACCTGACCG
323 TGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCT-GGAGCATCGTCGGAGAACCTGACCG
* **
17691710 GCGGCATTGGGGTTCCAATGATCGGGGGTGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
387 ACGGCATTGGGGTTCCAGCGATCGGGGG-GCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
17691775 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTC-AGAACTCACACCCCCTT
451 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCACACCCCCTT
17691839 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
515 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* * *
17691904 TTTTTTCAAATGGTCGCAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATTCC
580 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* *
17691969 AAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACA-CTTTCTGAAAAAATTTTAA
645 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-ATCTTTCCGAAAAAATTTTAA
* * * * * *
17692033 AAAAT-CCAAAACTGCAAAAAGTTTCAAAAATCATGAGAAATAGAAAACGGGTCGTCTTGCAATG
709 AAAATCCCGAATC-GTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
* *
17692097 AAACCTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
773 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * *
17692162 CGTAGAAATATGAAGATGTGCCAAAACCCACCTACCACACTATCGATCCACGGCTTGCGCATC
838 TGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* *
17692225 CCGTCTCTCTGGCTGGCATAGT----G--C-CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * ** *
17692283 CATACGGAGTTCATTCCAAGTCTAAGATCAGACCGAACTGAGGGTTGCGGTAATAGTATCGGCAG
66 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGCGGCAGCAGGATCGGCAG
* * *
17692348 CACACAGAGGGGGACCCGATGGATCTCCGGCTTGCGCATCCCGCCGCTCTGGCCGGCTGAGCGCT
131 CACACAGA-GGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCT
* * *
17692413 CGTACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCGGTCTAAGCATACAGAGT
195 -GCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGT
* * * * * *
17692478 TCATTCCCAGTCTAAGATCAGACCAGACCGAGAGTTGCAATAGCGCATGCTGGGCTCGGGCATGT
259 TCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGT
* * * *
17692543 GTTGGTGACGCATTTTTCTTCGTC-GGG--CC-A--C-----CATCGTCTGAGAACCTGATCGAC
324 GCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCGAC
* *
17692597 GGCATTAGGGTTCCAGCGAT--------C-GGGGGGTTTGCGCACATGATGTGCGATGGGTGCTG
389 GGCATTGGGGTTCCAGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
** * * * * **
17692653 GTACTTGGCAATTATATTGGCCCCTTATTCCTCATCGAACCTCGAGAACTCAAACCGTCTTAAAG
454 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * *
17692718 AGCATTTGAGATTTTATAGGTTTGTTGCCAGTAGCCATTAAAATGTCTGAAATGGGGACACTTTT
519 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * * * **
17692783 TTCAAATGGTCGCAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTATGCATGTGAACA
584 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* *
17692848 AAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCTTTCCGAAAAAATTTTAAAAAAT
649 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAAAAAAT
* *
17692913 CCCGAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTT
714 CCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* *
17692978 CATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
779 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGA
* * *
17693043 AATATAAAGATGTGCCTAAACCCACCTACCATCCTATCGATCCATGGCTTGCGCATC
844 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * *
17693100 CCGTCTCTCTGGCCGACGTAGTGCCCACCCGCCTGCCCGCCCGCTCATTTCGTCGG-TGGCTTAG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * * ** * *
17693164 GCATATGGAGTTCATTCCCAGTCTAAGACCCGATCGGA-TCGAGGGTTGCAGTGGCAAGATCGGT
65 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACT-GAGGGTTGCGGCAGCAGGATCGGC
** * ** * * * *
17693228 AGCATGCAGAGGAGGACCCGGTCGATCATCAGCTTACGCATCCCACCCCTCTGGCCGGTTGAGCG
129 AGCACACAGAGG-GGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
**
17693293 CCCACACGCTCAG-TTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGG
193 -CTGCACGCTC-GTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGG
* * *
17693357 AGTTCATTCCTAGTCTAAGATCGGACCGAACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCA
256 AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCA
* * * *
17693422 TGTGCTGGTACCGCATTTTCCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGCATCGTCGG
321 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGG---CA---CC--A--A-CGCTGGAGCATCGTCGG
* * * * *
17693487 AGAACCTGACTGACGGCATTGGGGTTCCGGCGATTGGGGGGGCCGGAGGGGTGTGCGCACTTGAT
375 AGAACCTGACCGACGGCATTGGGGTTCCAGCGA-TCGGGGGGCCGGGGGGGTGTGCGCACATGAT
* * * *
17693552 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATTAATCCTTGAGAACC
439 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
17693617 CACACCCCCTTAAAGAGGATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
504 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17693682 AATGGGGACACTTTTTTCCAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGCTGAATTTTT
569 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
17693747 TTGTGCATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCCTTCTGTA
634 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAA
* *
17693812 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATA-AAAACGAGTCAT
699 AAAATTTTAAAAAATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
17693876 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
764 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * * **
17693941 GCATTGGTATGCACAAATATGAAGATGTGCCTATACCCACCTACCACTTTATCGATCCACGGCTT
829 GCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
17694006 GCGCATC
894 GCGCATC
* * * *
17694013 CCGTCTCTCTGGGCGGCGTAGTGCCCG--C-CTGCCCGCCCGCTCGTTTCGTTGGTTGGCTTATG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * * * *
17694075 CATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGATC-GAGGGTTGCAGCAGCAAGATCAGTA
66 CATACGGAGTTCATTCCCAGTCTAAGATCAGACC-GAACTGAGGGTTGCGGCAGCAGGATCGGCA
* * * * * * *
17694139 GCACGCAGAGGGGGACCCAACCGATCCCCGGCTTTGCGTATCCCGCCCCTCTGGCTGACTGACCG
130 GCACACAGA-GGGGACCCGATCGATCCCCGGC-TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* ** * *
17694204 CCTGCACGCTTGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCTCAGTCTAAGCA-ATTGG
193 -CTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATA-CGG
* * * *
17694268 AGTTCATTCCCAGTCTAAGATTGGACCGGACCGAGGGCTGCGACAGCACATGCTAGGCTTGGGCA
256 AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCA
* *
17694333 TGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCG-TCGGAGCATCGTCGGAGAACCTGAC
321 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCT-GGAGCATCGTCGGAGAACCTGAC
* *
17694397 CGACGGCATTGGGGTTCCAACGATTGGGCGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
385 CGACGGCATTGGGGTTCCAGCGATCGGG-GGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
17694462 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
449 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* *
17694527 TAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACA
514 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* *
17694592 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGGAAGC
579 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* * * * *
17694657 CAAAAAAAATAAAAGGATCACATCTACCAAGTTAGGGGCCAAAACTCTTTCCGAAAAAATTTTAA
644 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAA
* * **
17694722 AAAATCCCAAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
709 AAAATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
*
17694787 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATAGCATTGGCAT
774 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
* *
17694852 GAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATC
839 GTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * *
17694914 CCGTCTCTCTGGCCGGCGTAGTGCCC-CCCGCCCGCTCGTCCACTCGTTTCGTCGGTTGGCTTAG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * * * *
17694978 GCATACGGATTTCATTCCCAGTCTAAGATTAGACC-ATTCTGGGGGTTGCAGTAGTAGGATCAGC
65 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTGAGGGTTGCGGCAGCAGGATCGGC
*
17695042 AGCACACAGAGGGGAACCCGATCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCA
129 AGCACACAGAGGGG-ACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC-
*
17695107 GCTGCAC-CGTCATTTCGTGGGTTGAC-T-----TAC---G--------CA---T-A-CAT----
192 GCTGCACGC-TCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGG
* * * * * ** * *
17695145 AGTTCATTCCCAGTCTGAGATCAGACCAGACCGAGGGTTGTGGCAGCACATGCTAAGCTCAGGCT
256 AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCA
*
17695210 TGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACC
321 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACC
* * * * * *
17695275 GACAGCATTGGGGTTCCGGCGATCGGGGGGTCGGGGGGGGTTTGCGCACATGATGTGCGCTAGGT
386 GACGGCATTGGGGTTCCAGCGATCGGGGGG-CCGGGGGGGTGTGCGCACATGATGTGCGATGGGT
* *
17695340 ACTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
450 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
17695405 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
515 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* * * *
17695470 TTTTTTCAAATGATCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATTCT
580 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* * * * *
17695535 AATAAAAATACAAGGATCATGTCGA-CAATGTTTGGGGCCAAAAATCCTTCCAAAAAAATTTTAA
645 AACAAAAATACAAGGATCACGTCTACCAA-GTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAA
*
17695599 AAAATCTCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
709 AAAATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* ** *
17695664 AACTTCACGTGAAGGCTTAAGCGACCATTGTATGAATTTACAAGCCATAAAAATACCATTGGAAT
774 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
*
17695729 GTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACGGCTTGCGCATC
839 GTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * * *
17695791 CAGTCTCTCTGGTCGGAGTAGTG-CC-CTC-CCGCCCGCCCGCTTGTTTCATCGGTTGGCTTAGG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
** * * * * * * * *
17695853 CATACGGAGTTCATTCGTAGTTTATGATC-GA-AGTAGACTGAGAGTTGTGACAGCAGGATTGGT
66 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCG-A-ACTGAGGGTTGCGGCAGCAGGATCGGC
** * * * *
17695916 AGCACGTAGAAGGGGACCCGGTTGATCCCCGGCTTGTGCATCCCGCCCCTCTTGCCGGCTGAGCA
129 AGCACACAG-AGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC-
* * * * * * * *
17695981 CCCGCACACTTGTTTTGTGGGTTGGCTTAGACATACGGAGTTCATTCCCAGTCTAAGCATACGGA
192 GCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGA
*
17696046 GTTCATTCCTAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
257 GTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* * ** * * *
17696111 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCAGAGCATCGCCAGAGAACCTAACCG
322 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCG
* ** *
17696176 GCGGCATTGGGGTTCCAATGATCGGGGGTGCCGGGGGGGTGTGCACACATGATGTGCGATGGGTG
387 ACGGCATTGGGGTTCCAGCGATCGGGGG-GCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
17696241 GTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTC-AGAACTCACACCCCCTT
451 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TCGAGAACTCACACCCCCTT
**
17696305 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAAACATTAAAGTGTCTGAAATGGGGACAC
515 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
17696370 -TTTTTCAAATGGTCGCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT-TGCATTCC
580 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
* *
17696433 AAGAAAAATACAAGGATCACGTCTTCCAAGTTTGGGGCCAAAACA-CTTTCCGAAAAAATTTTAA
645 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-ATCTTTCCGAAAAAATTTTAA
* * * * *
17696497 AAAAT-CCAAAACTGCAAAAAGTTTCAAAAATCATGAGAAATAGAAAACGGGTCGTCTTGCCATG
709 AAAATCCCGAATC-GTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
* *
17696561 AAACCTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
773 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * *
17696626 CGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACACTATCGATCCACGACTTGCGCATC
838 TGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * *
17696689 CCATCTCTCTGGCTGGCATAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* ** *
17696754 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAAGGGTTGCGGTAATAGTATCGGC
65 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTG-AGGGTTGCGGCAGCAGGATCGGC
* *
17696819 AGCACACAGAGGGGGACCCGATGGATCTCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
129 AGCACACAGA-GGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * * *
17696884 CCCGTACGCTCGTTTCATGGGTTGACTTAGGCATACAGAGTTCATTCCCGGTCTAAGCATACAGA
193 -CTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGA
* * *
17696949 GTTCATTCCCAGTCTAAGATCAGACCGGACCGAGAGTTGCAACAGCACATGCTGGGCTCGGGCAT
257 GTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
* * *
17697014 GTGTTGGTGACGCATTTTTCTTCGTC-GGG--CC-A--C-----CATCGTCTGAGAACCTGACCG
322 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCG
* *
17697068 ACGGCATTAGGGTTCCAGCGAT--------CGGGGGGGTTTGCGCACATGATGTGCGATGGGTGC
387 ACGGCATTGGGGTTCCAGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
** * * * **
17697125 TGGTACTTGGCAATTATATTGGCCCCTTATCCCTCATCGAACCTCGAGAACTCAAACCGTCTTAA
452 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* * *
17697190 AGAGCATTTGAGATTTTATAGGTTTGTTGCCAGTAGCCATTAAAATGTCTGAAATGGGGACACTT
517 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * * **
17697255 TTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTATGCATGTGAA
582 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * *
17697320 CAAAAATACAAGGATCATGTCTACCAAGTTTGCGGCCAAAACTCTTTCCGAAAAAATTTTAAAAA
647 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAAAAA
** * *
17697385 ATCCCGAATCGTAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGATTCGTCTTGCCATGAAAC
712 ATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* * *
17697450 TTCATGTGAAGGCTTAAGGGACCATTGTATGTATTTACAAGCCAT-----TGG---T---ATGCA
777 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTA
* * *
17697504 CAAATATGAAGATGTGCCTATACCCACCTACCACCTTATCGATCCACGGCTTGCGCATC
842 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * **
17697563 CCGTCTCTCTGGGCAGCGTAGTGCCCG--C-CTGCCCGCCCGCTCGTTTCGTTGGTTGGCTTATA
1 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * * * * * *
17697625 TATACGGAGTTCATTCCCAGTCTAAGATCAAACC-AGACCGAAGGTTGCAGCAGCAAGATCAGTA
66 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTGAGGGTTGCGGCAGCAGGATCGGCA
* * * * *
17697689 GCACGCAGAGGGGGACCCAACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG-CGACTGACCGC
130 GCACACAGA-GGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG-
** ** *
17697753 CTGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCTTAGTCTAAGCA-ATTGGA
193 CTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATA-CGGA
* * * * * * *
17697817 GTTCATTCCCAGTCTAAGATTGGACCGGACCGAAGGCTGCGGCAGCACATGCTAGGCTTGGCCAT
257 GTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAT
*
17697882 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG-TCGGAGCATCGTCGGAGAACCTGACC
322 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCT-GGAGCATCGTCGGAGAACCTGACC
* *
17697946 GACGGCATTGGGGTTTC-GACGATTGGGCGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
386 GACGGCATTGGGGTTCCAG-CGATCGGG-GGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
* *
17698010 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATTAATCCTCGAGAACTCACACCCCCT
449 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* *
17698075 TAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACA
514 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
*
17698140 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGCTTTTAGCTGAATTTTTTTGTGCATGC
579 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* * *
17698205 CAAAAAAAATACAAGGATGACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCAAAAAAATTTTAA
644 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAA
* *
17698270 AAAATCTCGAATCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
709 AAAATCCCGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* *
17698335 AACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGTCAT
774 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
* * *
17698400 GCAGAAATATGAAGATGTTCCTATACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
839 GTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
17698462 CCGTCTCTCTGGCCGGC
1 CCGTCTCTCTGGCCGGC
17698479 CGGGGGGTGT
Statistics
Matches: 6973, Mismatches: 856, Indels: 404
0.85 0.10 0.05
Matches are distributed among these distances:
867 1 0.00
868 140 0.02
869 69 0.01
870 206 0.03
871 4 0.00
872 142 0.02
873 241 0.03
874 444 0.06
875 460 0.07
876 16 0.00
877 607 0.09
878 2 0.00
879 38 0.01
880 10 0.00
881 7 0.00
882 247 0.04
883 174 0.02
884 53 0.01
885 194 0.03
886 8 0.00
887 1 0.00
888 374 0.05
891 5 0.00
892 36 0.01
893 6 0.00
894 3 0.00
895 5 0.00
896 95 0.01
897 8 0.00
898 375 0.05
899 150 0.02
900 681 0.10
901 612 0.09
902 386 0.06
903 291 0.04
904 142 0.02
905 3 0.00
908 2 0.00
909 20 0.00
910 84 0.01
911 169 0.02
913 164 0.02
914 298 0.04
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (900 bp):
CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGG
CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGCGGCAGCAGGATCGGCAG
CACACAGAGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCTG
CACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
ATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGC
TGGTGCCGCATTTTTCTTCGTCGGGGCACCAACGCTGGAGCATCGTCGGAGAACCTGACCGACGG
CATTGGGGTTCCAGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA
AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCTTTCCGAAAAAATTTTAAAAAATCC
CGAATCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAA
TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
Found at i:17692477 original size:26 final size:26
Alignment explanation
Indices: 17692441--17692493 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17692431 GTTGACTTAG
*
17692441 GCATACAGAGTTCATTCCCGGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17692467 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17692493 G
1 G
17692494 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17693353 original size:26 final size:26
Alignment explanation
Indices: 17693323--17693375 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17693313 GTTGACTTAG
17693323 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
17693349 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17693375 G
1 G
17693376 ATCGGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17693472 original size:11 final size:11
Alignment explanation
Indices: 17693456--17693488 Score: 57
Period size: 11 Copynumber: 3.0 Consensus size: 11
17693446 GCCGGGGCAC
17693456 CATCGCCGGAG
1 CATCGCCGGAG
17693467 CATCGCCGGAG
1 CATCGCCGGAG
*
17693478 CATCGTCGGAG
1 CATCGCCGGAG
17693489 AACCTGACTG
Statistics
Matches: 21, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
11 21 1.00
ACGTcount: A:0.18, C:0.33, G:0.36, T:0.12
Consensus pattern (11 bp):
CATCGCCGGAG
Found at i:17696048 original size:26 final size:26
Alignment explanation
Indices: 17696012--17696063 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
17696002 TTGGCTTAGA
17696012 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGGAGTTCATTCCCAGTCTAAG
*
17696038 CATACGGAGTTCATTCCTAGTCTAAG
1 CATACGGAGTTCATTCCCAGTCTAAG
17696064 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.25, G:0.19, T:0.29
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGTCTAAG
Found at i:17696944 original size:26 final size:26
Alignment explanation
Indices: 17696914--17696966 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17696904 GTTGACTTAG
*
17696914 GCATACAGAGTTCATTCCCGGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17696940 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17696966 G
1 G
17696967 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17698930 original size:498 final size:500
Alignment explanation
Indices: 17697975--17698976 Score: 1675
Period size: 498 Copynumber: 2.0 Consensus size: 500
17697965 CGATTGGGCG
*
17697975 GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
1 GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCC
* * * *
17698040 TATCCCTCATTAATCCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCC
66 TATCCCTCATGAAACCTCAAGAACTCACA-CCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCC
* *
17698105 TGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
130 TGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * * *
17698170 ACTTCGAGCTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATGACGTCTACCAA
195 ACTTCGAGCTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATAAAAGGATCACATCTACCAA
* * * * **
17698235 GTTTGGGGCCAAAAATCTTTCCAAAAAAATTTTAAAAAATCTCGAATCGTAAAAAGTTTCAAAAA
260 GTTAGGGGCCAAAAATCTTTCCAAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAA
17698300 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTG
325 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTG
* * * * * *
17698365 TATGAATTTACAAGCCATAAAAATGGCATTGTCATGCAGAAATATGAAGATGTTCCTATACCCAC
390 TATGAATGTACAAGCCATAAAAATAGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCAC
*
17698430 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC
455 CTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGCC
17698476 GGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCC
1 GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCC
* *
17698540 TATCCCTCGTGAAACCTCAAGAACTCACA-CCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCT
66 TATCCCTCATGAAACCTCAAGAACTCACACCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCT
17698604 GCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
131 GCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * *
17698669 CTTCGAGTTTTTAGCTGAATTTTTTTGTGGAAGCCAAAAAAAATAAAAGGATCACATCTTCCAAG
196 CTTCGAGCTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATAAAAGGATCACATCTACCAAG
* *
17698734 TTAGGGGCCAAAACTCTTTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAAT
261 TTAGGGGCCAAAAATCTTTCCAAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAAT
*
17698799 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
326 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGT
*
17698864 ATGAATGTACAAGCCATAAAAATAGCATTGGCATGAAGAAATATGAAGATGTGCCTAAAGCCACC
391 ATGAATGTACAAGCCATAAAAATAGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACC
*
17698929 TACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGTC
456 TACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGCC
17698974 GGC
1 GGC
17698977 GTAGTGCCCG
Statistics
Matches: 467, Mismatches: 34, Indels: 3
0.93 0.07 0.01
Matches are distributed among these distances:
498 379 0.81
500 84 0.18
501 4 0.01
ACGTcount: A:0.31, C:0.22, G:0.20, T:0.27
Consensus pattern (500 bp):
GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCC
TATCCCTCATGAAACCTCAAGAACTCACACCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCT
GCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
CTTCGAGCTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATAAAAGGATCACATCTACCAAG
TTAGGGGCCAAAAATCTTTCCAAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAAT
CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGT
ATGAATGTACAAGCCATAAAAATAGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACC
TACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGCC
Found at i:17701861 original size:26 final size:26
Alignment explanation
Indices: 17701831--17701883 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17701821 GTTGACTTAG
17701831 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17701857 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17701883 G
1 G
17701884 ATTTTATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17702274 original size:892 final size:890
Alignment explanation
Indices: 17698476--17703746 Score: 6136
Period size: 894 Copynumber: 5.9 Consensus size: 890
17698466 CTCTCTGGCC
*
17698476 GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCCT
1 GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* * * *
17698541 ATCCCTCGTGAAACCTCAAGAACTCACA--CCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCT
66 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
*
17698604 GCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
131 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * * * * *
17698669 CTTCGAGTTTTTAGCTGAATTTTTTTGTGGAAGCCAAAAAAAATAAAAGGATCACATCTTCCAAG
196 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
* * **
17698734 TTAGGGGCCAAAACTCT-TTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAA
261 TTTGGGGCCAAAAAT-TATTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAA
*
17698798 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
325 TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
* * * * *
17698863 TATGAATGTACAAGCCATAAAAATAGCATTGGCATGAAGAAATATGAAGATGTGCCTAAAGCCAC
390 TATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCAC
* * * *
17698928 CTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCTGTC
455 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCG-C---C
* * * * *
17698993 CGCCCGCCTGCTCGATTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGATCGGA
516 CGCTCG-CT--T---TT-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA
* * * * * *
17699058 CTGGACTGAGGGTTACGACAGTAGGATCGGCAGCACGCAGAGGGGGACTCGACTGAT-CCCAGCT
574 CTGGACTGAGGGTTGCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCT
* * * **
17699122 TGCGCATGCCACCCCTCTGGCCTGCTGAGCGCCCAG-ACGCTCATTTTGTGGGTTGACTTAGGCA
639 TGCGCAT-CCGCCCCTCTGGCCGGCTGAGCGCCC-GCACGCTCGTTTCATGGGTTGACTTAGGCA
* *
17699186 TACAGAGCTCATTCCCAGTCTAAG-AT-C--AG---------A--C-----T--G-T---ACCGA
702 TACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGACCGA
* ** * * * *
17699225 GGGTTACGACAGCACGTGCTGGGCTCAGG-CATATGCTGGTGTCGCA--TTT-TTC-T-------
767 GGGTTGCGGTAGCACATGCTGGGCTC-GGACATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCA
* ** *
17699278 ---TCGTTGGAGCATCGCCAGAGAACCTGACCGACGGCATTGGGGTTCCGGTGATTGGTGG
831 CCATCGTTGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG-GG
* * * * * *
17699336 GGCAGGGGGGTGTGCGCACATGATGTGCGAAGGGTGCTAGTACTTGGCCCTTCTATTGGGCCCTT
1 GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* * * *
17699401 ATTCCTCAACAAACCTTGAGAACTCACACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
66 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* * * *
17699466 GCCAATTGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATCGTCACAAAATCTTGTACA
131 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
** * *
17699531 CTTCGAGTTTTTAAATGAATTTTTTTGTACATGCCAACAAAAATACAAGGATCACATCTACCAAG
196 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
* ** *
17699596 TTTGTGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCAAAACCGTAAAAAGTTTCAAAAAT
261 TTTGGGGCCAAAAATTATTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAAT
* * *
17699661 CATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACAATTGT
326 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
* * *
17699726 ATGAATTTTCAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAGGATGTGCCTAAACCCACC
391 ATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACC
* * *
17699791 TACCACCCTATCGATCTACGACTTGCGCATCCAGTCTCTCTGGCC-GTCGTAGTGCCTGCCCGCC
456 TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGT-GTAGTG-CT---CG--
* * *
17699855 CCCCCGCCCGCTCATTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCATA
514 --CCCGCTCGCT--TTT-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA
* * ** * * * * *
17699920 CCGGACCGAAAGTTAG-GGCAGCAGGATCGGCAGCATGTAGAGGGGGACCCGGTCGATCTCCGGC
574 CTGGACTGAGGGTT-GCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGC
17699984 TTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCA
638 TTGCGCATCC-GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCA
* **
17700049 TTCAAAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGACCGA
702 TACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGACCGA
* * * * * * *
17700114 GGGTTACGGTAGCATATGCTGGGCTCAGACATGTGCTGGAGCCACATTTTTCTTCGCCAGGACAC
767 GGGTTGCGGTAGCACATGCTGGGCTCGGACATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCAC
* * * * * *
17700179 GATCGTCGGAGCATCGTCGGAGAACC-GAATCGGCAGCATTGGGGTTCCGACGATCGGGGG
832 CATCGTTGGAGCATCGCCGGAGAACCTG-ACCGACGGCATTGGGGTTCCGACGATC-GGGG
** * *
17700239 GGTTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCCGGTACTTGGCCTTTATATTGGCCCCCT
1 GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
17700304 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
66 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
*
17700369 GCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
131 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * * * * *
17700434 CTTCGAGTTTTTAGCTGAATTTTTTTGTGGAAGCCAAAAAAAATAAAAGGATCACATCTTCCAAG
196 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
* * **
17700499 TTAGGGGCCAAAACTCT-TTCCGAAAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCAAAAA
261 TTTGGGGCCAAAAAT-TATTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAA
* * * *
17700563 TCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA-TTGTACGTGCAGGCTTAAGGGAACATT
325 TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT-CACGTGAAGGCTTAAGGGACCATT
* *
17700627 GTATGATTTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCA
389 GTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCA
* * * ** *
17700692 CTTACCACCCTATCGATCCACGGCTTACG-ATCCCGTCTCTCT-GCCCGTCCGCCCGCCCGCTCG
454 CCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGT--G-TAG--TGCTCG
* ** * *
17700755 CCCAG-TCG-TTTCGTCAATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-TGAATCG
514 CCC-GCTCGCTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACT-G
* * ** * * *
17700817 GACTGATGGTTACGGTAGCAGGATCAGCAACACGCCGAGGGGGACCCGGCCGATCCCCGGCTTGC
577 GACTGAGGGTTGCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGC
* * * * * * *
17700882 GCATCCCGCCCCTTTGGCCGGTTGAGCGCCCGCACGCTGGTTTTATGGGTTGACTTAGGTATTCA
642 GCAT-CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACG
** *
17700947 GAGTTCATTCCCAGTCTAAGCATAC-AGAGTTCATTTTCAGTCTAAGATCAGATCGGACCGAGGG
706 GAGTTCATTCCCAGTCTAAGCATACGA-AGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGG
* ** * * * ** *
17701011 TTGTGACAGCACATGTTGGGCTCAGACATGTGCTGGAGCCACATTTTTCTTCACCGGGGCACGAT
770 TTGCGGTAGCACATGCTGGGCTCGGACATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCAT
* ** * * * * * * * * *
17701076 CGTCGGAGCATCATCGGAGAACATAACTGGCAGTATTGGGGTTTCAACAATCGGGG
835 CGTTGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGG
* *
17701132 GGCCGGGGCGGTGTGCGCACATGATGTGCGATGGGTGTTGGTACTTGGCCCTTATATTCGCCCCC
1 GGCCGGGG-GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* *
17701197 TATCCATCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGC
65 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
17701262 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
130 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * *
17701327 AGTTCGAGTTTTTAGCTGAATTTTTTTGTGCTTGCCAACAAAAATACAAGGATCACGTCTACCAT
195 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA
* * * **
17701392 GTTTGGGGCCAAAAATTATTTCAAAAAAATTTAAAAAAATCCTGAACCGTAAAAAGTTTCAAAAA
260 GTTTGGGGCCAAAAATTATTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAA
* *
17701457 TCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTT
325 TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
* * * * *
17701522 TATGAATTTACAAGCCATAAAAATGGCATTGGGATGCAGAAATTTAAAGATGTGCCTAAAACCAC
390 TATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCAC
*
17701587 CTACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCGCCCGCT
455 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCGCCCGCT
* * * * * *
17701652 CG-TTTTATCGGTTGGCTTAGGCATACGGAGTTTATTGCCAGTCTAAGCTTAGACTAGACTGAGG
520 CGCTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGG
* * * * * * * *
17701716 GTTGCTACAGTAGGATCGGTAGCACACAGATGGGGACTCGACCGATCCCCGGCTTGCGTATCTCG
585 GTTGCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATC-CG
* * * *
17701781 CCCCTCTAGTCAGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCAT
649 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCAT
* * *** *
17701846 TCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGATTTTATCAGACCAAGGGTTGCGGTAG
714 TCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGGTTGCGGTAG
* * * * *
17701911 CACATGCTCGGCTCGGGCTTGTGCTGGTGCCGCATTTCTCTTCGTCGGGGCACCATCGTTGGAGC
779 CACATGCTGGGCTCGGACATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTTGGAGC
* * * * *
17701976 ATCACCGGAGAACCTGACCGATGGCATTAGGGTTCCAACAATCGGGG
844 ATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGG
* *
17702023 GGCCTGCGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACATGGCCCTTATATTGGCCAC
1 GGCC-G-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
17702088 CTATCCCTTATCAAATCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACGAGG-TT
64 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC-AGGTTT
* * * *
17702152 GCTGCCAGTAGCCATTAAAGAGTTTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATATTGT
128 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
*
17702217 ACACTTAGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
193 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* ** * * * * *
17702282 AAGTTTGGGGCCAAAACTCCTCCCAAAAAAATTTTAAAAAATCTCAAACCGTAAAACGTTTCGAA
258 AAGTTTGGGGCCAAAAATTATTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAA
*
17702347 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCAT
323 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
* * *
17702412 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAACATGTGCCTAAAGCC
388 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCC
* * * ** *
17702477 ACCAACCACCCTATCGATCCACGGCTTGCGCATCCCGTGTCTCTGGGCGACGTAGTGCCCGCCCG
453 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCG--C-
* **
17702542 GCCGCCCGCTCGATTCT-TCGGTTGGCTTAGGTGTACGGAGTTCATTCCCAGTCTAAGATCAGAC
515 -CCGCTCGCT---TT-TGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
* * * * * * * *
17702606 CGAACTGAGGGTTGC-ATGAGCAGGATCGACAGCACGCAGAAGAGGACCCGACTGATCCCCGGCT
575 TGGACTGAGGGTTGCGA-CAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCT
* *
17702670 TGCGCATCCCGCCCCTCTAGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCAT
639 TGCGCAT-CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCAT
17702735 ACGGAGTTCATTCCCAGTCTAAG-AT-C--AG---A----C---C---G----GA-C--A--GAG
703 ACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAG
* * *
17702774 GGTTACGGCAGCACATGCTGGGCTC-GAGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCGC
768 GGTTGCGGTAGCACATGCTGGGCTCGGA-CATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCAC
* * * * * * **
17702838 CATCGCTAGAGCATCGCCAGAGCACCTGACCGATGGCATTGGGGTTCTGGTGATCGGGGG
832 CATCGTTGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGG
*
17702898 GGCCGGGGAGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
1 GGCC-GGG-GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* * *
17702963 CTATCCCTCATCAAACCTTGAGAACTCGCACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTG
64 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* * *
17703028 CTGCCAGAAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAAAAAAACTTGTA
129 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * * * **
17703093 C-CGTTCGAGTTTTTAACTGAATTTTTTTATGCATGCCAAAAAAAATAAAAGGATCTTGTCTACC
194 CAC-TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
** * * *
17703157 AAGTTTGGGGCCAAAAA-TATTTTTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAGGTTTCTA
258 AAGTTTGGGGCCAAAAATTA-TTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAA
* * *
17703221 AAATCGT-AAAAATAGAAAACGAGTCGGCTTGCCACGAAACTTCACGTGAAGGCTTAAGGGACCA
322 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
*
17703285 TTGTATGAATTTACAAGCCATAAAAATGGAATTGGCACGCAGAAATATGAAGATGTGCCTAAACC
387 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACC
* * * ** *
17703350 CACCTACCACCGTATCGATCCACGGCTTGCGCATCCCGTCTCTCTAGCAGACGTAGTGCCCGCCC
452 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCGCCC
** *
17703415 GCTCGTCCACCTGCACGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCTTAGTCTACGATC
517 GCTCG-----CT-----TTT-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * * *
17703480 AGACTGGA-TCGAGGGTTCCGATAGCAGGATCAGTAGCACACAGAGGGGGACCCGGTCGATCCCC
571 AGACTGGACT-GAGGGTTGCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCC
* * * *
17703544 AGCTTGCGCATCCTGCCCCTTTGGCCGGCTGAGCACCCGCACGCTCATTTCATGGGTTGACTTAG
635 GGCTTGCGCATCC-GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* ** * * *
17703609 ACATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATTGGACCGGAT
699 GCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGAC
* * * * *
17703674 CGAGGGTTGCGGTAGCACATGCTGGGCTCGGCCATATGCTGGTGCCGCATTTCTCTTCGTCGTGG
764 CGAGGGTTGCGGTAGCACATGCTGGGCTCGGACATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
17703739 CACCATCG
829 CACCATCG
17703747 CCAGAGCATG
Statistics
Matches: 3787, Mismatches: 485, Indels: 234
0.84 0.11 0.05
Matches are distributed among these distances:
860 80 0.02
861 1 0.00
862 465 0.12
863 81 0.02
864 2 0.00
865 4 0.00
866 9 0.00
867 2 0.00
869 2 0.00
870 6 0.00
872 1 0.00
873 1 0.00
874 276 0.07
875 292 0.08
876 3 0.00
877 5 0.00
878 169 0.04
879 4 0.00
880 1 0.00
882 2 0.00
883 2 0.00
885 2 0.00
886 2 0.00
888 1 0.00
889 41 0.01
890 2 0.00
891 310 0.08
892 467 0.12
893 21 0.01
894 740 0.20
895 20 0.01
896 13 0.00
897 2 0.00
898 6 0.00
899 6 0.00
900 175 0.05
901 5 0.00
902 20 0.01
903 477 0.13
904 65 0.02
905 3 0.00
906 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
GGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
TTTGGGGCCAAAAATTATTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAAT
CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
ATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACC
TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCGCCCGCTC
GCTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGG
TTGCGACAGCAGGATCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCGCC
CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
CCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGGTTGCGGTAGCA
CATGCTGGGCTCGGACATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTTGGAGCAT
CGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGG
Found at i:17703640 original size:26 final size:26
Alignment explanation
Indices: 17703610--17703661 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
17703600 TTGACTTAGA
*
17703610 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGAAGTTCATTCCCAGTCTAAG
17703636 CATACGAAGTTCATTCCCAGTCTAAG
1 CATACGAAGTTCATTCCCAGTCTAAG
17703662 ATTGGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACGAAGTTCATTCCCAGTCTAAG
Found at i:17704849 original size:26 final size:26
Alignment explanation
Indices: 17704819--17704871 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17704809 GTTGAATTAG
*
17704819 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
17704845 GCATACGAATTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17704871 G
1 G
17704872 ATCGGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.26, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17706457 original size:26 final size:26
Alignment explanation
Indices: 17706427--17706479 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17706417 GTTGACTTAG
17706427 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
17706453 GCATACGGATTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17706479 G
1 G
17706480 ATCGGATAGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.26, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17707769 original size:26 final size:26
Alignment explanation
Indices: 17707733--17707785 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17707723 GTTGACTTAG
17707733 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
*
17707759 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
17707785 G
1 G
17707786 ATCGAACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:17714288 original size:26 final size:26
Alignment explanation
Indices: 17714252--17714304 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17714242 GTTGACTTAG
* *
17714252 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17714278 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
17714304 G
1 G
17714305 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:17714675 original size:26 final size:26
Alignment explanation
Indices: 17714638--17714690 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17714628 GTTGACTTAG
* *
17714638 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17714664 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17714690 G
1 G
17714691 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17714678 original size:386 final size:373
Alignment explanation
Indices: 17713974--17714738 Score: 1048
Period size: 386 Copynumber: 2.0 Consensus size: 373
17713964 AAATGGCATT
* * *
17713974 GGCATGCAAGAATGTCAAGATATGCCTAAACCCACCTACCACCCTATCGATCTATGGCTTGCGCA
1 GGCATGCAAGAATATCAAGATATGCCTAAACCCACCTACCACCCTATCGATCCATAGCTTGCGCA
* * *
17714039 TCCCGTCTATCTGATCGGCGTAGTGCCCACCCGCTTGTTTTGTCGGTTGGCTTAGGCATACGGAG
66 TCCCGTCTATCTGACCGGCGTAGTGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
** * ** * *
17714104 TTCATTCCCAGTCTAAGATTGGACAGGACTGAGGTTGTGGCAGCAGGATCGACAACACGCAGAGG
131 TTCATTCCCAGTCTAAGATCAGACAGAACTGAGGTTACGGCAGCAAGATCGACAACAAGCAGAGG
* * *
17714169 AGGACCCGACTGATCCTCGGCTTGCACATCTCGCCCCTCTGGCTGGTTGAGCGCCCGCACGCTCG
196 AGGACCCGACTGATCCTCGGCTTGCACATCTCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCG
17714234 TCTCGTGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACAGAGTTCATTCCCAG
261 TCTCGTGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACAGAGTTCATTCCCAG
** * * * *
17714299 TCTAAGATTGGACCAGACCGAGGGTTGTGGTAGCACATGCTGGGCTCG
326 TCTAAGATCAGACCAGACCAAAGGTTGCGGCAGCACATGCTGGGCTCG
* * *
17714347 GGCATGCAGGAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATAGCTTGCGCA
1 GGCATGCAAGAATATCAAGATATGCCTAAACCCACCTACCACCCTATCGATCCATAGCTTGCGCA
17714412 TCCCGTCTATCTGACCGGCACAGTGCCCACCCGCTTGCCCACCCGCTCGTTTCGTCGGTTGGCTT
66 TCCCGTCTATCTGACCGG--C-GT----A---G--TGCCCACCCGCTCGTTTCGTCGGTTGGCTT
* *
17714477 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAACTGAGGGTTACGGTAGCAAGATCGA
119 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACAGAACTGA-GGTTACGGCAGCAAGATCGA
* * * * * **
17714542 CAGCAAGTAGAGGGGGCCCCG-GTCGATCCTCGGCTTGTGCATCTCGCCCCTCTGGCCGGCTGAG
183 CAACAAGCAGAGGAGGACCCGACT-GATCCTCGGCTTGCACATCTCGCCCCTCTGGCCGGCTGAG
*
17714606 CACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATAC-
247 CACCCGCACGCTCGTCTCGTGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACA
*
17714670 GAAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAAGGTTGCGGCAGCACATGCTGGGCTCG
312 G-AGTTCATTCCCAGTCTAAGATCAGACCAGACCAAAGGTTGCGGCAGCACATGCTGGGCTCG
*
17714733 AGCATG
1 GGCATG
17714739 TGCTGGGGCT
Statistics
Matches: 340, Mismatches: 37, Indels: 17
0.86 0.09 0.04
Matches are distributed among these distances:
373 76 0.22
375 1 0.00
376 2 0.01
380 1 0.00
383 1 0.00
385 70 0.21
386 189 0.56
ACGTcount: A:0.21, C:0.29, G:0.27, T:0.23
Consensus pattern (373 bp):
GGCATGCAAGAATATCAAGATATGCCTAAACCCACCTACCACCCTATCGATCCATAGCTTGCGCA
TCCCGTCTATCTGACCGGCGTAGTGCCCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
TTCATTCCCAGTCTAAGATCAGACAGAACTGAGGTTACGGCAGCAAGATCGACAACAAGCAGAGG
AGGACCCGACTGATCCTCGGCTTGCACATCTCGCCCCTCTGGCCGGCTGAGCACCCGCACGCTCG
TCTCGTGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACAGAGTTCATTCCCAG
TCTAAGATCAGACCAGACCAAAGGTTGCGGCAGCACATGCTGGGCTCG
Found at i:17715140 original size:26 final size:26
Alignment explanation
Indices: 17715104--17715156 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17715094 GTTGACTTAG
17715104 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
17715130 GCATATGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17715156 G
1 G
17715157 ATCAGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17716052 original size:25 final size:26
Alignment explanation
Indices: 17716001--17716052 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17715991 GTTGACTTAG
* *
17716001 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGACTTCATTCCCAGTCTAA
17716027 GCATACAGACTTCATT-CCAGTCTAA
1 GCATACAGACTTCATTCCCAGTCTAA
17716052 G
1 G
17716053 ATCGCACTAG
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 10 0.42
26 14 0.58
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACAGACTTCATTCCCAGTCTAA
Found at i:17716617 original size:897 final size:892
Alignment explanation
Indices: 17714864--17718545 Score: 4654
Period size: 896 Copynumber: 4.1 Consensus size: 892
17714854 GTGCGATGCA
* * * * ** * *
17714864 CTATCGATCCACGGCTTGTGCATCCCGTTTCTCTGGTCGATGTGGTGCCCGCCCGCCCGTTCGTT
1 CTATCGATCCATGGCTTGCGCATCCCGTCTC-CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTT
* * * * *
17714929 TCGT-TAGTTGGCTTAGGCATACAGAGTTCATTCCCA-TGCTAAGATCGGACCAAACCGAAGGTT
65 TCGTCGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGT-CTAAGATCAGACCAGACCGAGGGTT
* * * ** ** ** * *
17714992 GCGGTAGCAGGATCGGTAGCACGTAGAGGGGGACTTGGTCGATCGTCGGCTTGCGAATCTCGCCC
128 GCAGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCC
* ** **
17715057 ATCTGGCCGGCTGAGCGCTCGTTCGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCC
193 CTCTGGCCGGCTGAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCC
* * * ** * *
17715122 CAGTCTAAGCATATGGAGTTTATTCCCAGTCTAAGATCAGATTGGATCGAGGGTTGCGGCAGCAC
258 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCAC
* *
17715187 ATGCTGGGCTCGAGCATGTGCTGG-GCTGCATTTTTCTTCACCGGGGCACCATCACCGGAGCCTC
323 ATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGCCGGAG-CTC
* * *
17715251 ACCGGAGAACCTGACCAGC-AGCATTGGGGTTCCGACGATCGAGGGGGTCGGGGGGGTGTGTGCG
387 -CCGGAGAACCTGA-CTGCGA-CATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGG-GTGTGCG
* * *
17715315 TACATGATGTGCGATGTGTGCTGGTATTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
448 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
*
17715380 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
513 CGAGAACTCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* * *
17715445 GAGTCTGAAGTGGGGACACTTTTTTCAATTGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
578 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
* * * * ***
17715510 TAATTTTTTTGTGCATGCCAAAACAAATAAAAGGATCACGTCTACCTTTTTTGGGGCCAAAACTC
643 GAATTGTTTTGTGCATGCCAAAA-AAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTC
* * ** *
17715575 CTTTCGAAAAAATTTTAACAAATCTCCAACCTTAAAAAGTTTCCAAAATCGTGAAAAATAGAAAA
707 CTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAA
* *
17715640 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCTA
772 CGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
17715705 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
837 TAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
*
17715761 CTAT-GATCCATGGCATGCGCATCCCGTCTCCATGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTT
1 CTATCGATCCATGGCTTGCGCATCCCGTCTCC-TGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTT
* * * *
17715825 TCGTCGATTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCAAACCGGACTGAGGGTTGC
65 TCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC
* * *
17715890 AGCAGCAGGATTGACAGCACACAGAGGGGGACTCGGTCGATCCCCGGCTTGCGCATCCCGCCCCT
130 AGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCC-
* *
17715955 TCTGGCCGGCTGAGCGCTCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
194 TCTGGCCGGCTGAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * * ** *
17716020 AGTCTAAGCATACAGACTTCATT-CCAGTCTAAGATCGCACTAGACCGAGGGTTGCGGCAGCACA
259 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACA
* * ** *
17716084 TACTGGGCTCAGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCA-CTGCCAGAGCATC
324 TGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATC-GCCGGAGC-TC
* * **
17716148 GCCAGAGAACCTGACTAGCGATATTGGGGTTCCGGTGATCGGGGGGGCCGAGGGGGGGCTGTGCG
387 -CCGGAGAACCTGACT-GCGACATTGGGGTTCCGACGATCGGGGGGGCCG-GGGGGGG-TGTGCG
*
17716213 CACATGATGTGCGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
448 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
*
17716278 CGAGAACTCA-AACCCCTTAAATAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
513 CGAGAACTCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAA
* * * *
17716342 GTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAAT-TTGTATAGTTTGAGTTTTTAGC
578 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC-AAAATCTTGTACACTTCGAGTTTTTAGC
* *
17716406 TGAACTT-TTTTGTGCATGCCAATAAAAACACAAGGATCACATCTACCAAGTTTGGGGCCAAAAA
642 TGAA-TTGTTTTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAAC
* * * *
17716470 TCCTTTCAAAAAAATTTTAAAAAATCTCGAATCACAAAAAGTTTCAAAAATTGTGAAAAATAGAA
705 TCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAA
* * * *
17716535 AATGAGTCATCTTGCCATGAAACTTTACGTGAAGGCTTAAAGAACCATTGTATGAATTTACAAGC
770 AACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
* * *
17716600 CATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACGACC
835 CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * *
17716658 CTATCGATACACGGCTTGCGCATCCTGTCTCTCTGGCTGGCATAGTGCCCGTCCGCCCGCCTGCC
1 CTATCGATCCATGGCTTGCGCATCCCGTCTC-CTGGCCGGCGTAGTG--C--CCG--C-CC-GCC
* * *
17716723 CGCTCGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCTCAGTCTAAGATCAGACCAGACCG
57 CGCTCGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCG
* * * * * * *
17716788 AGGATTGCAGCAACAAGATTGGCAGCACACAGAGGGGGACCCGATCGATCCCTGGCTTGCGTATC
122 AGGGTTGCAGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATC
* * * * *
17716853 CCGCCCCTCTGGTCGGCTGAGCACCCACACGCTCGTTTCATGGGTTGACTTAGGCGTACGGAGTT
187 CCGCCCCTCTGGCCGGCTGAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTT
*
17716918 CATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGA
252 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGA
* *
17716983 CAGCACATGCTGGGCTCGGGCATGTGTTGGTGCTGTATTTTTCTT---C---G-----TCG--GG
317 CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGCCGG
* ** * * *
17717035 -G----C-----A--T---T-----A---GGGTTTCGATAATCGGGGGGGCTTGGGGCGGGTGTA
382 AGCTCCCGGAGAACCTGACTGCGACATTGGGGTTCCGACGATCGGGGGGGC-CGGGGGGGGTGTG
* * *
17717077 AGCGCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATGCCTCATCAAAC
446 CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* * *
17717142 CTCGAGAACTCACATCCCCTTAAAAAGCCTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
511 CTCGAGAACTCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* * *
17717207 AAGTGTCT-AGAATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTTCACTTTGAGTTTTTA
576 AAGTGTCTGA-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* *
17717271 GTTGAATTGTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
640 GCTGAATTGTTTTGTGCATGCC-AAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAA
* * * *
17717336 CTCCATCCGAAAAAATTTTAAAAACTCTCGAACTGCAAAAA-TTTCAAAAATCGTGAAAAATAGA
704 CTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
17717400 AAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
769 AAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
*
17717465 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGTTGTGCCTAAACCCACCTACCACC
834 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * *
17717524 CTATCGATCCAGGGCTTGCGCATCCCGTCCCTCTGGCCGGCGTAGTTCCCGCATACCCGCCCGCT
1 CTATCGATCCATGGCTTGCGCATCCCGTCTC-CTGGCCGGCGTAGTGCCCG----CCCGCCCGCT
* * * *
17717589 CGTTCCATC-AGTTGGCTTAGGCATACGGAGTTCATTCACAATCTAAGATCAGACCAGACCGAGG
61 CGTTTCGTCGA-TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGG
** * ** * * *
17717653 GTTGTGGCAGCAGGATCGGTAGCACGTACAGGGGGACCCGGTCGATCCCCGACTT-TGCATCCCG
125 GTTGCAGCAGCAGGATCGGCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCG
* ** *
17717717 CCCCTCTGGTCGGCTGAGCGAC-CGCACGCTTATTTCATGGGTTGACTTAGGCATACAGAGTTCA
190 CCCCTCTGGCCGGCTGAGCG-CTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCA
* * *
17717781 TTCCCAGTCTAAGAATACCGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAAGGTTGCGACA
254 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACA
* ** *
17717846 GCACATGCTGGGCTCGGGCATGTGATGGTGCCACATTTTTCTTCACCGGGGCACCATCGTCGGAG
319 GCACATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGCCGGAG
* * * *
17717911 CTTCCCGGGGAACCTGACTGACGGCATTGGGTTTTCGACGATCGGGGGGGCC--GGGGGGTGTGC
384 C-TCCCGGAGAACCTGACTG-CGACATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTGC
** *
17717974 GCACATGATGTAAGATGGGTGCTGGTACTTGGCCCTTATATTGTCCCCCTATCCCTCATCAAACC
447 GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC
17718039 TCGAGAACTCAC-ACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
512 TCGAGAACTCACAAC-CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* * *
17718103 AAGTGTC-GAAATGGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGTGATTTTAG
576 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* *
17718167 CTGAATTGTTTTATGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGTCAAAAC
641 CTGAATTGTTTTGTGCATGCCAA-AAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAAC
* ** *
17718232 TCCCTTCGAAAAAATTTTAAAAAATC-CTGAACCGCAAAAAGTTTTGAGAATCGTGAAAAATAGA
705 TCCTTTCGAAAAAATTTTAAAAAATCTC-GAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
* * * *
17718296 AAATGAGTCGTTTTGCCATGAAACTTCATC-TGAAGGCTTAAGGGACCATTGTATGAATTTACCA
769 AAACGAGTCATCTTGCCATGAAACTTCA-CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* *
17718360 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTACCTAAACACACCTACCACC
833 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * *
17718420 CTATCGATCC-TCGGCTTACGCATCCCATCTTTCTTGCCGGCGTAGTGCCCGCCCGCCCGCTCGT
1 CTATCGATCCAT-GGCTTGCGCATCCCGTC-TCCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGT
* * * ** *
17718484 TTCATCGATTGGCTTAGGCATTCGGAGTTCATTACCAGTCTAAGATTGGACCGGACCGAGGG
64 TTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG
17718546 CTACGGCAGC
Statistics
Matches: 2429, Mismatches: 273, Indels: 171
0.85 0.10 0.06
Matches are distributed among these distances:
861 163 0.07
862 110 0.05
863 2 0.00
864 3 0.00
866 262 0.11
867 215 0.09
868 3 0.00
870 1 0.00
872 3 0.00
874 2 0.00
875 1 0.00
876 1 0.00
879 1 0.00
880 1 0.00
881 1 0.00
885 1 0.00
886 1 0.00
887 1 0.00
890 1 0.00
892 66 0.03
893 2 0.00
894 3 0.00
895 144 0.06
896 525 0.22
897 486 0.20
898 127 0.05
899 20 0.01
900 2 0.00
902 3 0.00
903 1 0.00
904 1 0.00
905 80 0.03
906 196 0.08
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (892 bp):
CTATCGATCCATGGCTTGCGCATCCCGTCTCCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTT
CGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCA
GCAGCAGGATCGGCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTC
TGGCCGGCTGAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATG
CTGGGCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCTCCCGG
AGAACCTGACTGCGACATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTGCGCACATGAT
GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
CACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTT
TTGTGCATGCCAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAA
AAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATC
TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
Found at i:17716939 original size:26 final size:26
Alignment explanation
Indices: 17716909--17716958 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
17716899 GACTTAGGCG
17716909 TACGGAGTTCATTCCCAATCTAAGCA
1 TACGGAGTTCATTCCCAATCTAAGCA
*
17716935 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCATTCCCAATCTAAG
17716959 ATCGGACCGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.26, G:0.18, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAATCTAAGCA
Found at i:17717803 original size:26 final size:26
Alignment explanation
Indices: 17717769--17717820 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
17717759 TGACTTAGGC
17717769 ATACAGAGTTCATTCCCAGTCTAAGA
1 ATACAGAGTTCATTCCCAGTCTAAGA
*
17717795 ATACCGAGTTCATTCCCAGTCTAAGA
1 ATACAGAGTTCATTCCCAGTCTAAGA
17717821 TCGGACCGGA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.33, C:0.25, G:0.15, T:0.27
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAGTCTAAGA
Found at i:17719172 original size:709 final size:709
Alignment explanation
Indices: 17717795--17719248 Score: 2073
Period size: 709 Copynumber: 2.0 Consensus size: 709
17717785 CAGTCTAAGA
* * *
17717795 ATACCGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAAGGTTGCGACAGCACATGCTGGGCT
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAAGGCTACGACAGCACATGCTGGGCT
* * * *
17717860 CGGGCATGTGATGGTGCCACATTTTTCTTCACCGGGGCACCATCGTCGGAGCTTCCCGGGGAACC
66 CGGGCATGTGATGGTGCCACATTTTTCTTCACCGGGGCACCATCGCCAGAGCATCCCGGAGAACC
* * *
17717925 TGACTGACGGCATTGGGTTTTCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTAAGAT
131 TGACCGACGGCATTGGGTTTTCGACAATCGGGGGGGCCGGGGGGTGTACGCACATGATGTAAGAT
* *
17717990 GGGTGCTGGTACTTGGCCCTTATATTGTCCCCCTATCCCTCATCAAACCTCGAGAACTCACACAC
196 GGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACAC
* * * *
17718055 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCGAAATGGAGA
261 CCTTAAAGAGCATTTGAGATTTTACAGATTTGCTACCAGCAGCCATTAAAGTGTCAAAATGGAGA
* * *
17718120 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGTGATTTTAGCTGAATTGTTTTATGCAT
326 CACTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGAGATTTTAGCTAAATTGTTTTATGCAT
* *
17718185 GCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGTCAAAACTCCCTTCGAAAAAATTTT
391 GCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGCGCCAAAACTCCCTTCGAAAAAATTTT
* ** * * * * *
17718250 AAAAAATCCTGAACCGCAAAAAGTTTTGAGAATCGTGAAAAATAGAAAATGAGTCGTTTTGCCAT
456 AAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCATCTTGCCAT
**
17718315 GAAACTTCATCTGAAGGCTTAAGGGACCATTGTATGAATTTACCAGCCATAAAAATGGCATTGGC
521 GAAACTTCATCTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGC
*
17718380 ATGCAGAAATATGAAGATGTACCTAAACACACCTACCACCCTATCGATCCTCGGCTTACGCATCC
586 ATGCAGAAATATGAAGATGTACCTAAACACACCTACCACCCTATCGATCCACGGCTTACGCATCC
* *
17718445 CATCTTTCTTGCCGGCGTAGT-GCCCGCCCGCCCGCTCGTTTCATCGATTGGCTTAGGC
651 CATCTCTCTAGCCGGCGTAGTCGCCCGCCCGCCCGCTCGTTTCATCGATTGGCTTAGGC
* * * * *
17718503 ATTCGGAGTTCATTACCAGTCTAAGATTGGACCGGACCGAGGGCTACGGCAGCACATGCTGGGCT
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAAGGCTACGACAGCACATGCTGGGCT
* ** *
17718568 C-GGCATGTGCTGGTGCCGTATTTTTCTTCACCGGGGCACCATCGCCAGAGCATCGTCGGAGAAC
66 CGGGCATGTGATGGTGCCACATTTTTCTTCACCGGGGCACCATCGCCAGAGCATC-CCGGAGAAC
* * *
17718632 CTGACCGGCGGCATTAGGG-TTTCGATAATC-GGGGGGCCTGGGGCGGGTGTATGCACATGATGT
130 CTGACCGACGGCATT-GGGTTTTCGACAATCGGGGGGGCC--GGG-GGGTGTACGCACATGATGT
** *
17718695 GCGATGGGTACT-GTACTTGGCCCTTATATTGGCCCCCTATGCCTCA-CAAACCTCGAGAACTCA
191 AAGATGGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
17718758 CA-TCCCTTGAAAGAGCCTTTGAGATTTTATAGATTTGCTACCAGCAGCCATTAAAGTGTCTAAA
256 CACACCCTT-AAAGAGCATTTGAGATTTTACAGATTTGCTACCAGCAGCCATTAAAGTGTC-AAA
* * * *
17718822 ATGGGGACACTTTTTTCAAATGCTCACAAAATCTTGTAGACTTTGAGTTTTTAGCTAAATCT-TT
319 ATGGAGACACTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGAGATTTTAGCTAAAT-TGTT
*
17718886 TTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGCGCCAAAACT-CCTTCCGA
383 TTATGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGCGCCAAAACTCCCTT-CGA
* * *
17718950 AAAAATTTTAAAAACTCCCGAACTGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCA
447 AAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCA
*
17719015 TCTTGCCATGAAACTTCA-CGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAACAA
512 TCTTGCCATGAAACTTCATC-TGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAA
* * *
17719079 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATGCACGGC
576 TGGCATTGGCATGCAGAAATATGAAGATGTACCTAAACACACCTACCACCCTATCGATCCACGGC
** * * * *
17719144 TTGTGCATCCCGTCTCTCTAGGCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
641 TTACGCATCCCATCTCTCTAGCCGGCGTAGT---CGCCCGCCCGCCCGCTCGTTTCATCGATTGG
17719209 CTTAGGC
703 CTTAGGC
* *
17719216 ATACGAAGTTCATTCCCAGTCTAAGATCAGACC
1 ATACGGAGTTCATTCCCAGTCTAAGATCGGACC
17719249 AAATCAAGGG
Statistics
Matches: 657, Mismatches: 75, Indels: 23
0.87 0.10 0.03
Matches are distributed among these distances:
707 60 0.09
708 157 0.24
709 350 0.53
710 27 0.04
713 63 0.10
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (709 bp):
ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAAGGCTACGACAGCACATGCTGGGCT
CGGGCATGTGATGGTGCCACATTTTTCTTCACCGGGGCACCATCGCCAGAGCATCCCGGAGAACC
TGACCGACGGCATTGGGTTTTCGACAATCGGGGGGGCCGGGGGGTGTACGCACATGATGTAAGAT
GGGTACTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACAC
CCTTAAAGAGCATTTGAGATTTTACAGATTTGCTACCAGCAGCCATTAAAGTGTCAAAATGGAGA
CACTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGAGATTTTAGCTAAATTGTTTTATGCAT
GCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGCGCCAAAACTCCCTTCGAAAAAATTTT
AAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCATCTTGCCAT
GAAACTTCATCTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGC
ATGCAGAAATATGAAGATGTACCTAAACACACCTACCACCCTATCGATCCACGGCTTACGCATCC
CATCTCTCTAGCCGGCGTAGTCGCCCGCCCGCCCGCTCGTTTCATCGATTGGCTTAGGC
Found at i:17719411 original size:26 final size:26
Alignment explanation
Indices: 17719375--17719424 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
17719365 TGACTTAGGT
17719375 ATATGGAGTTCATTCCCAGTCTAACC
1 ATATGGAGTTCATTCCCAGTCTAACC
*
17719401 ATATGGAGTTCATTCCTAGTCTAA
1 ATATGGAGTTCATTCCCAGTCTAA
17719425 GATCGGACCG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.22, G:0.16, T:0.34
Consensus pattern (26 bp):
ATATGGAGTTCATTCCCAGTCTAACC
Found at i:17721171 original size:26 final size:26
Alignment explanation
Indices: 17721141--17721191 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
17721131 GTTGACTTAG
17721141 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
17721167 GCATACGGAGTTCATTGCTAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
17721192 GGATCGGACC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.24, G:0.22, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17722668 original size:902 final size:895
Alignment explanation
Indices: 17720263--17758184 Score: 25286
Period size: 902 Copynumber: 42.2 Consensus size: 895
17720253 GTTGACTTAG
* * * *
17720263 GCATACGGAGTTCATTCCCAGTCTAAGATCGCATCAGACCGAGGGTTGTTGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** * * *
17720328 CTAC-GGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGTCGGAG
66 CT-CGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAG
* * * * * *
17720392 AACCTAACCGGCGGCATTGGGGTTCCGACAATCGGGGATGCCGGGGGGGGTGTGCACACATGATG
130 AACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGG--G-CTGGGGGGGTGTGCGCACATGATG
* * * *
17720457 TGTGATGGGTGCTGGTGCTTGGACCTTATATAGGCCCCTTATCGCTCATCAAACCTCGAGAACTC
192 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTC
* *
17720522 ACCCCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
17720587 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTCTAGCTGAATTTTAT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT-T
17720652 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-CCTTCCAAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
** * *
17720716 ATTTTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* * * *
17720781 TTGCCATGAAACTTCACGTCAAGGCTTAAGGGACCATTGTAGGAATTTACAAGCCAAAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC-ATAAAATAG
* * * *
17720846 CATTGGCATGTAGAAATATGAAGATGGGCCTAAACCCTCCTACCACCCTATCAATCCACAGCTTG
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * *
17720911 CGCATCTCGTCTCTCTGGCCGGCGTAGTGCCTGCCCACCCGTCTGCCCGATCATTTCATCGGTTG
644 CGCATCCCGTCTCTCTGGCCGGCGTA--G--TGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTG
* * * ** ** *
17720976 GCTTTGGCATAC-AGAGTTCATTCCCAGTCTATGATCAGACCGTACCGAGGGTTACGGTAGTAAG
705 GCTTAGGCATACGA-AGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAG
*
17721040 ATCGACAGCACGTAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
769 ATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
* * *
17721105 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
834 TGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * **
17721167 GCATACGGAGTTCATTGCTAGTCTAGGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* *** *
17721232 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCGTTGTCGGAGCATCAACAGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * ** * *
17721297 ACCTGACTGACGGCAATAGGGTTCCGGTGATCGGGGGGCT-AGGGGG-GTGCGCACATGATGTGT
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT-AGGGGGCTGGGGGGGTGTGCGCACATGATGTGT
* *
17721360 GGTGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTT-TCCCTCATCAAACCTTGAGAACTCAC
195 GATGGGTGCTGGTACTTGGCCCTTATATTGG--CCCTTATCGCTCATCAAACCTTGAGAACTCAC
**
17721424 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCCACCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
17721489 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAACTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTG
* * * *
17721554 TGCGTGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTTCTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* * * * * * * * *
17721619 GTTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAATTTGACAACGAGCCGTCTA
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
* * *
17721684 GCCATGAAACTTCACGTGAAGGCTCAATGGACCATTGTATGAATTTACAAGCCATAAAAAAGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAATA-GCA
17721749 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
581 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
17721814 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGCTCGTTTCGTCAGTTGGCTTAG
646 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTAG
** * * * **
17721879 GCATACGAAGTTCATTCCTAGTCTAAGATTGGACCAAACTGAGGGTTGCGACAGCAAGATTGGTA
711 GCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGACA
* * * * *
17721944 GCACGCAGAGGGGGACCCGGTTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCTGGCTGAGCGC
776 GCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGC
* * *
17722009 CCGTACGTTCGTTTCGTGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
841 CCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * *
17722064 GCATATGGAGTTCATTCCCAGTCGAAGATTGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * *
17722129 CTCGGGCATGTGCTGGTGCCGTATTTTTTTTCGTCGGGGCACCATCACCGGAGCAACGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
17722194 ACCTGACTGGCGGCATTGGGGTTCCGACGATTAAGGGGGCTGGGGGGGTTGTGCGCACATGATGT
131 ACCTGACTGGCGGCATTGGGGTTCCGACGA-T-AGGGGGCTGGGGGGG-TGTGCGCACATGATGT
* * *
17722259 GCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCTATATCGCTCAACAAACCTTGAGAACTCA
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCT-TATCGCTCATCAAACCTTGAGAACTCA
*
17722324 CATCCCCTTAAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
257 CACCCCCTT-AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
17722389 ATGGGGACACTTTTTTCAAATGGTTACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTGTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT-TTT
*
17722454 TGTGCATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* *
17722519 AAATTTTAAAAAATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCATC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* * * *
17722584 TTGCCATGAAACTTCGCTTGAAGGCTTAAGGGACCAATGTATGAATTTACAAGCCATAAAACTAT
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA-TAG
*** * * *
17722649 CATTGGCACACAAAAATATGAAGATGTGCCTAAGCCCACCTACCACCCTATCGATCCACGGCTTG
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * *
17722714 CGCATCCCGTTTCTCTGGTCGGCGTAGTGCCCGTTCCCCCGCCTGCCCGTTCATTTCGTCGGTTG
644 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG----CCCGCCTGCCCGATCATTTCGTCGGTTG
* * * * ** *
17722779 GCTTAGGCATACGGAGTTCTTTCCTAGTCTAAG--CATACGAAGTTC-A---TTTC--CAGTCTA
705 GCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAA-ACCGAGGGTTACGACAG-C-A
* * * * * * * ** * ** ** ***
17722836 AAATTCGACCGGAC-C-GAGGGTTGCG-GCAGCA-C-ATGCTGGGCTCGGGCAT-GTGCTGGTCT
767 AGA-TCGACAGCACGCAAAGGG--G-GACCCG-ATCGATCCCCGGCTTGCACATCCCGCCCCTCT
**** *** * * * * ** *
17722895 -GCATTTTTCTTCGCCCGC-CTACTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
827 GGC-CGGCTGAGCGCCCGCAC-GCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCA
*
17722958 GTCTAAGA
890 ATCT-A-A
* * * * ** * * **
17722966 TTGGACCAAACTGAGGGTTGCGATAGCAGCATTGGCAGCACGT-AGAGGGGGACCCGGCCGA-CC
1 ---G--CATAC-G-GAGTT-C-AT-TC--C-----CAG-TC-TAAGA-TCGGACCAGACCGAGGG
* * * * * ** * * * * ***
17723029 CT-CGGCTTGCACATCCCGCCCCTCTGGC-CG-GCTGAGCGCCCGCA-CGCTCGTTTCGT-GGGT
46 TTGTGGC-AGCACATGCTG-GGCTCGGGCATGTGCTG-GTG-CCGTATTTTTC--TTCGTCGGG-
* * * ** * ** *** *
17723089 TGACTAAGGCAT-A-CGGAGTTTATTC-CCAGTCTAAGCAT-AC-GGACTTCATTCCAAG-T-CT
104 -G-C--A-CCATCACCGGAG--CA-TCGACAG-AGAA-CCTGACTGG-CGGCATT-GGGGTTCCG
** * * * * * ** * * *
17723147 AAAATCAGACCGGAC-CGAGGGTTACGACAGCACATG-T-TGGGCTAGGGCATATGCTGGTGC--
157 ACGAT-AG--GGGGCTGGGGGGGTGTG-C-GCACATGATGTGTGAT-GGG----TGCTGGTACTT
** * * * * * **
17723207 GGCATTTTTCTTCGTCGGGGCACC--ATCG-TCGGAGCATCACC--GAAGAACCTGACCGACGGC
212 GGCCCTTAT-AT--T---GGC-CCTTATCGCTC--ATCA-AACCTTG-AGAA-CTCA-C-ACCCC
* ** * *** * * * * ****
17723267 ATT---G-GGGTTCCGACGATCGGGAGGCCAGGGGGTGTGC-GCATATGATGTGCGATGGGTGCT
263 CTTAAAGAGCATT-TGA-GAT-TTTA---CA---GGTTTGCTGC-CA-G-T-AGCCATTAAAG-T
* * ** * ** * *** **
17723327 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCGAACCTCGAGAACTCAC-ACCCCATTAA
314 -GT-C-T-G-----AAATGGGGACACT-T---TTTTC-AA-AT-G-G---TCACAAAATC-TTGT
* * * * * ** * ** ** *
17723391 AGACCATTTGAGATTTTA-CAG-GTTTGCTG-CCAGTAGCCATTAAAGTGTCTGCAATGGGGAT-
358 ACA-C-TTCGAGTTTTTAGCTGAATTTTTTGTGCA-T-GCCAACAAA---AATACAA---GGATC
* * ** * * ***
17723452 ACTTTTTTCAA--AT-GGTCACAAAATCTTGTACACTTCCAGTTTTTAGCTGAATTTTTTTATGC
413 ACGTCTACCAAGTTTGGGGC-CAAAA-C---T-C-CTTCCA------A----AA--AAATT-T--
** * ** *
17723514 ATGCCAACAAAAATACAAGGATCCCGTCTACCAAGTTTATGGCCAAAAATCCTTTCGAAAAAATT
456 -T----A-AAAAAT-C-CCGA-ACCG-C-AAAAAG-TT-T---CAAAAAT-C-AT-G-AAAAA--
* * * * ** *
17723579 TTAAAAAATCCAAAACCGTAAAAATTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
499 -TAGAAAAT--------G-----A--GTCG----TCTTG--CCAT-G-AAAC---T--TC---AC
* * * * * * * *
17723644 ATGAA-ACTTCACGTGAAGGC-TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
532 GTGAAGGCTT-AAG-GGA-CCATT----G--TATG-----AATTTACAAGCCAT-AAAATAGCAT
* * *
17723707 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGC
582 TGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * * * * *
17723772 ATCCCGTCACTCTGGCCGACGTAGTGCCGGCTCGCCCACCCGCCCGCTCGTTTTGGCGGTTGGCT
647 ATCCCGTCTCTCTGGCCGGCGTAGTG-C--C-CGCCCGCCTGCCCGATCATTTCGTCGGTTGGCT
* * ** * ** * *
17723837 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGAATCGAGGGTTGTGGCAGCAGGATCG
708 TAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCG
* * * * * * * * * *
17723902 ATAGCACGTAGACGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTTTGGCTGGTTGAG
773 ACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAG
* * * ** * *
17723967 AGACCACACGCTCGTTTCATGGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
838 CGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * ** * * *
17724025 GCATACGGTGTTCATTCCCAGTTTAAGATCAAATCAGACTGAGGCTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * *
17724090 CTCGAGCATGTTCTAGTGCCGTATTTTTCTTCATCGGGGCACCAT---C--A-C--CG---GAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * * * * *
17724144 ACCTAACCGGTGGCATTAGTGTTCCGGCGATCGGAGGGGCT--GGGGGTGTGCGTACATGATGTG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT-AG-GGGGCTGGGGGGGTGTGCGCACATGATGTG
* * * * *
17724207 CGATCGGTG-TCGGTACTTGGCCCTTATATTGCTCCCCTATCCCTCATCAAACCTCT-AGAACTC
194 TGATGGGTGCT-GGTACTTGGCCCTTATATTG-GCCCTTATCGCTCATCAAACCT-TGAGAACTC
*
17724270 ACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
17724335 ATGTGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCCAGTTTTTAGCTAAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
** * *
17724400 TGTGCATAACAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
** * * *
17724464 AAATTTTAAAAAATCCCGAACCAAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* *
17724529 TTGCCATCAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAG
* * *
17724594 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTG
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* ** * * *
17724659 CGCATCCCGTCTCTCTAGTTGGCGTAGTGCCCGCCTGCCCGCCC-ACTCATTTCGTCAGTTGGCT
644 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGA-TCATTTCGTCGGTTGGCT
** * * ** *
17724723 TAGGCATACGAAGTTCATT-CTCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGTAGCAGGATC
708 TAGGCATACGAAGTTCATTCCT-AGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATC
* * * ** * *
17724787 GACAGCGCGCAGAGGGGGACTCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCAGCTGA
772 GACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGA
* * * * *
17724852 GCGCCCGCACGTTCGTTTCGTGGGCTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTAA
837 GCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGA-AGTTCATTCCCAATCTAA
** * * * *
17724911 GCATGTGGAGTTCATTCCTAGTCTCAGATCAGACCGGACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * * * *
17724976 CTCGAGCATGTGCTGGTGCCGCAATTTTCTTCGTCGGGGCACCATCA-C---G-ATCG--GGGGG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * *
17725034 GCC-G---GG-GG----GGTG-TGCG-C-ACA------T-----GATGT--GCA-ATG--G-GTG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTGGGGGGGTGTGCGCACATGATGTGTG
* * * * * * * *
17725070 CT-GGTACTTGG--C----CCTTATAT-TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
196 ATGGGTGC-TGGTACTTGGCCCT-TATATTGGCCCTTATCGCTCATCAAACCTTGAGAACTCACA
* * *
17725127 CCCCCTTAAAGAGCATTTGAGATTGTACAGGTTTGCTGCCAATAGCCGTTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
17725192 GGGACACTTTTTTTAAATGGAT-ACAAAATCTTGTACACTTCGAGTTTTTAGGTGAATTTTTTTA
324 GGGACACTTTTTTCAAATGG-TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTG
* * * * * *
17725256 TTCATGCCAAAAAAAATGCAAGGATCACTTTTACCAAGTTTAGGGCCAAAACTCCTTCCAAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
** * * **
17725321 ATTTTAAAAAATCTTGAACC-CTCAAAAGTTTCAAGAATCATGAAAAATAGAAAACAAGTCGTCT
452 ATTTTAAAAAATCCCGAACCGC-AAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* *
17725385 TGCCGTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* * * *
17725450 AGTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
17725515 GCATCCCGTCTCTCTGGCCAGCGAAGTGCCCGCCCGCCTG--C--TCGTTTCGTCAGTTGGCTTA
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTA
* * * * * * * * *
17725576 GCCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTTC-AGCAACAGGATCGG
710 GGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGA-CAGCAAGATCGA
* * * * * * * **
17725640 CAGCATGCAGAGGGAGACCCGATCGATCCCCATG-TTGCGCATCCCCCCCCCTTTGGCCAACTGA
774 CAGCACGCAAAGGGGGACCCGATCGATCCCC-GGCTTGCACAT-CCCGCCCCTCTGGCCGGCTGA
* * * ** * * *
17725704 GTGACCGCACGCTCATTTTGTGGGTTGACTTAGGCATATGGAA-TTCATTCCCACTCTAA
837 GCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATA-CGAAGTTCATTCCCAATCTAA
* * * * *
17725763 GCAGACGAAGTTCATTCCCAGTCTAAGATGGGACCGGACCGAGGGTTGTGGCAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * * *
17725828 TTCGGGCATGTGCTAGTGCTGTATTTTTCTTCG-CTGGGGCACCATCACCGGAGCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC-GGGGCACCATCACCGGAGCATCGACAGAG
** * * * * *
17725892 AACCTGACCAGCAGCATTGGGGTTCTGGCGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * * * * *
17725957 GCGTTGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCG
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCA
* *
17726022 CACCCCCTTAAAGAGCATTTGAGATTGTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
17726087 TGGGGACACTTTTTTCAAATGGAT-ACAAAATCTTGTACACTTCGAGTTTGTAGCTGAATTTTTT
322 TGGGGACACTTTTTTCAAATGG-TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * * * *
17726151 ATGCATGCCAACAAAAATGCAAGGATCACTTTTACCAAGTTTAGGGCCAAAAATCCTTCCGAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
** * * * *
17726216 AATTTTAAAAAATCCTAAACCGTAAAAAGTTTCGAAAATCGTGAAAAATAAAAAATGAGTCGTCT
451 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* * * * *
17726281 TGCCATGAAATTTCAGGTGAAGGCTTAAGGGACCATTGTGTGAATTTACAAGCCTTAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* * * * *
17726346 AGTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTTATCAATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
17726411 GTATCCCGTCTCTCTAGCCAGCGAAGTGCCCGCCCGCCCGCTCGCCCGCTTC-TTTCGTCGGTTG
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG--C-CT-GCCCG-ATCATTTCGTCGGTTG
* * * * * * * *
17726475 GCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAAACCAGACTGAGGGTTGCGGCAGTAGGA
705 GCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGA
* * ** ** *
17726540 TCGGCAGCACGTAGAA-GGGGACCCGATCGATCCCCATCTTGTGCATCCCGCCCCTTTGGCCGGC
770 TCGACAGCACGCA-AAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
* * ** * * *
17726604 TGAGTC-ACCGCACGCTCATTTTGTGGGTTGACTTAGGCATATGGAA-TTCATTCCCACTCTAA
834 TGAG-CGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATA-CGAAGTTCATTCCCAATCTAA
*
17726666 GCATACGGAGTTCATTCCCAGTCTAAGAT-GAGACCAGACCGAGAGTTGTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCG-GACCAGACCGAGGGTTGTGGCAGCACATGCTGG
* * * * * * *
17726730 GTTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGCCGGGGCACCACCACCAGAGCATCGTCAGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAG
* * * * *
17726795 AACCTGA-TCGGCGGTATTGGGGTTCCGGCGATCGGGAGGGC-CGGGGGGTGTGCACACATGATG
130 AACCTGACT-GGCGGCATTGGGGTTCCGACGAT-AGG-GGGCTGGGGGGGTGTGCGCACATGATG
* * * **
17726858 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTC
192 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTC
*
17726923 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
17726988 ATGGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TTTT
* *
17727053 TGTGCATACCAA-AAACAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
385 TGTGCATGCCAACAAA-AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
* * *
17727117 AAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGT
449 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
* *
17727182 CTTGCCATGAAACTTCACGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATA
* * * *
17727247 GTATTGGCATGCAGAGATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
578 GCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * ** * * *
17727312 GCGCATCCCGTATCTTTGGCCGGCGTAGTACCCGCCCGCCCACCCGCTCGTTTTC-TCAGTTGGC
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATC-ATTTCGTCGGTTGGC
* ** * * * *
17727376 TTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGATCAAACTGAGGGTTGCGATC-GCAGGAT
707 TTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGA-CAGCAAGAT
* * * ** *
17727440 TGGCAGCACGCAGAA-GGGG-CCCTGGTCGATCCCCGGCTTGTGCATCTCGCCCCTCTGGCCGGC
771 CGACAGCACGCA-AAGGGGGACCC-GATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
* * * * * *
17727503 TGAGCGCCCGTATGCTCATTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
834 TGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* *** * * ** * ****
17727565 G-AT-CGGACCAGATCGAGGGTT-GTGGTAGC-AAGATTGGCAGCACGCAAAGGGGGACCCGGCC
1 GCATACGG---AGTTC-A---TTCCCAGT--CTAAGATCGG-ACCA-G-ACCGAGGGTTGTGG-C
* * ** * ** * * * * ***
17727626 AATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCA-CGCTCGTTTCGT-GGG
53 -AGCACATGC-TGGGC-T--CG-GGC-AT-G-TG-CTG-GTG-CCGTATTTTTC--TTCGTCGGG
* * ** * * * ***
17727689 TTGACTTAGGCAT-A-CGGAGTTCATTC-CCAGTCTAAGCAT-AC-GGAGTTCATTCCCAG-TCC
104 --G-C--A-CCATCACCGGAG--CA-TCGACAG-AGAA-CCTGACTGGCG-GCATT-GGGGTTCC
* * * * * * * * * * * *
17727748 -AAGATCGGACCGGATGGAGGGTTACG-GCAGCACATGCTGGGCTTA-GGCTGTGTTGGTGC--C
156 GACGATAGG--GGGCTGGGGGGGT--GTGC-GCACATGATGTG-TGATGG--GTGCTGGTACTTG
** * * * *
17727808 GCATTTTTCTTCGTCGGGGCACC--ATCGC-CGA--AGAACC-TGACCG-ACGGCATTGGGCTTT
213 GCCCTTAT-AT--T---GGC-CCTTATCGCTC-ATCA-AACCTTGA--GAAC-TCA-----C--A
** ** * **** * * ** * * * *** **
17727866 CACCGATCGAGGAGCGGGGGGGGTGTGCGCACATGATGTGTGATG--GGT-GCTGGT-ACTTGGC
259 C-CCCCTTAAAGAGCATTTGAGAT-T--TTACA-G--GTTTGCTGCCAGTAGCCATTAAAGT-G-
* * * * ** * ** * **** ** * *
17727927 CCTTATATTGGCCCCCTATCCCTCATCAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAG
315 TCTGAAATGGGGACACT-T---TTTTCAA-AT-G-G---TCACAAAATCTTGTACA-C-TTCGAG
* * * ** ** * * * **
17727992 ATTTTA-C--AA--GTTTGCTGCCAGTAGGCATTAAAGTGTTTAAAATGGGGA-CACTTTTGTCA
368 TTTTTAGCTGAATTTTTTG-TG-CA-T-GCCAACAAA---AATACAA---GGATCACGTCTACCA
* * * **** ** *** *** ** *
17728051 A--AT-GGTCACAAAA-TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
423 AGTTTGGGGC-CAAAACTCCT-T-C-CAAAAAAATTTTA----AAAAATCCCGAAC-CG-C-AAA
** * * * ** * ** * *
17728112 AAAATACAAGAATCACGCCTACCAAGCTCGGGGCCAAAA--A-TC--CTT-CCAAAAAAATTTTA
477 AAGTTTCAAAAATCATG---A--AAAAT---AG--AAAATGAGTCGTCTTGCC-ATGAAACTTCA
** ** * * ** * ** * *
17728171 --AAAATTCTCAA---ACC---GCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
531 CGTGAAGGCTTAAGGGACCATTGTATGAA-TTT-ACAAGCCAT--AAAATAG----C-A-TTGGC
* * * * * * ** * * ***
17728228 TTGCCATGAAACT-TCACACGAAG-GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
586 ATG-TA-GAAA-TATGA-A-GATGCGCCTAA---ACC--------CACCTACCA-CCCTATCGAT
* * * * *** * ** ** * ***
17728291 GGCATTGGCATGCAGAAATATGAAGT-TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
634 -CCA-CGGCTTGC-G---CATCCCGTCTCT--CT-GGCCGGCGTA-GTGCC---CG--CC-C-GC
* * * * ** * * ** * ** * *
17728355 TTGCGC-ATCCCGTCTC-TCTGGCCGGCGTAGTGTC-TGCCCGCCCACCTGCCCTGCTCGTTTCG
682 CTGCCCGAT--CATTTCGTC-GGTTGGCTTAG-G-CAT--ACG---AAGTTCATTCCTAG--TC-
* * * * * * * * ** *
17728417 TCAGTTGGCTTAG-GCATACAGA-GTTTATTC-CCAGTCTA-A--GATTGGAC-CAAATCGAGGG
734 TAAGAT--C--AGACCAAACCGAGGGTTA--CGACAG-CAAGATCGACAGCACGCAAA--G-GGG
* * * ** ** * **** * ** * *
17728475 TTACAACAGCA-GGATCAGCAACATGTCA-AGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCC
789 -GAC--CCG-ATCGATCCCCGGCTTG-CACATCCCG-CCC-CTC--TGGCCGGC-TGAGC-GCCC
* ** * * * * **** ** ** * *
17728538 GC-CCCTC-TGGC-CGGCTGAGCGCCCGC--ACGCTCGTTTCATGGGT-TGACT-TAG
843 GCACGCTCGTTTCATGGGTTAACTTAGGCATACG-AAG-TTCAT---TCCCAATCTAA
* * * * * * ** *
17728589 GCATACGGAGTTCATTCCTAATCTAAGATCGGATCGGATCGAGAGTTGCAGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * ** *** * *
17728654 CTCGGGCATGTGCTAGTGCCGCATTTTTCTTCGCCAAGGCACCATCGTTGAAGCATC-ACTGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGAC-AGAG
* * *
17728718 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGG--GCGGGGGGTGTGCGCACATGATGTG
130 AACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTG-GGGGGGTGTGCGCACATGATGTG
* * * *
17728781 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCAC
* *
17728846 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTAAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
17728911 GGGGACACTTTTTTCAAATGGTAACAAAATCTTCTACACTTCGAGTTTTTAGCTGAATTTTTTTC
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTG
* * * *
17728976 TGCGTGCCAGA-AAAAAGACAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTCCTTCCGAAAA
387 TGCATGCCA-ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* * * ** *
17729040 AAGTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCATCT
451 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* * * *
17729105 TGCCATTAAACTTCACGTGAAGGCTTAAGGGACCTTTGTATGAATTTTCAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* * * *
17729170 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCTGCCACCCTATCGATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
** *** * * * * *
17729235 GCATCATGTCTCTCTGGTATGAGTAGTGCCCACCCGCCTGCCCGCCCGTTCATTTTGTCGGTTGC
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCT----GCCCGATCATTTCGTCGGTTGG
* * ** * * **
17729300 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACTGAGGGTCACGGTAGCAAGAT
706 CTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGAT
* * * * * * * * *
17729365 CGATAGCACGTAGAGGGGG-CCCCACCGATCCCTGGCTTGCGCATCCCGCACCTCTGGCCAGCTG
771 CGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTG
** * * * *
17729429 AGAACCTGCACG--C--TT-A-----T---TT---C--ACG-GGTTGA----C--T-TAG
836 AGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * *
17729463 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATC-GAACCGAGGGTTGCGGCAGCACATACTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGTGGCAGCACATGCTGG
* ** ** * *
17729527 GCTCGGGCATGTGCTGGTGCCGTATTTGTCTTCACCAAGGCACCATCACCGAAGCATC-ACCG-G
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAG
* * * * *
17729590 AAACCTGACCGGCGGTATTGGGGTTCCGACGATCGGAGGGGTCGGGGGGGTTGTCCGCACATGAT
130 -AACCTGACTGGCGGCATTGGGGTTCCGACGATAGG-GGGCT-GGGGGGG-TGTGCGCACATGAT
* ** * * * *
17729655 TTACGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCGAGAACT
191 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACT
* *
17729720 CACACCCCCTTAAAGAGCATATGAGATTTTACAGATTTGCTGCCAGTAGCCATTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
17729785 AATGGGCACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG-TTGTAGCTGAATTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTT
* * *
17729849 TTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGGTTGGGGCCAAAACTCCATCCAAA
384 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
* * *
17729914 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGT
449 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
* * * * * *
17729979 CTCGCCATTAAACTTCACGTGAAGGCTTAAGGAACCAATGTATAAATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATA
* ** * * *
17730044 GCATTGGCACGTAGAAATATGAAGATATGCCTAAACCCACCTGCCACTCTATCAATCCACGGCTT
578 GCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* ** * * * * * * *
17730109 GCGCATCCCATCTCTCTGGCTTGTGTAGTG--C-CACTCC-ACCCGCTCGTTTCATCGGTTGGCT
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCT
* * * * *
17730170 TAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCACACTGAGGGTTACGATAGCAGGATCA
708 TAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATC-
* * ** * * * * * **
17730235 GTA-A-CACGCAGAGAGGGACCCGGCCAATCCTCGGCTTGCGCATCTCACCCCTCTGGCCGTTTG
772 G-ACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTG
* * * * * *
17730298 AGCGCCCGGACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 AGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* *
17730358 G-AT-C--A----A-----A--C------C-G----GACCGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* ** ** * * *
17730397 CTCGAGCATGTGCTGGTGCCACATTTTTCTTCCCCAGGGCACCATCATCGGAG-A---AC-CAG-
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * * * *
17730456 ACC-GA----CGACATTGGGATACCGGA-GAT------C-GGGAGGGTGTCCGTACATGATGTGC
131 ACCTGACTGGCGGCATTGGGGTTCC-GACGATAGGGGGCTGGGGGGGTGTGCGCACATGATGTGT
* * * * * *
17730508 GATGGGTTCTGGTACTTGGCCTTTATATTGAACCCCTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTG-GCCCTTATCGCTCATCAAACCTTGAGAACTCACA
* *
17730573 CCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
17730638 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTATG
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTGTG
* * * * *
17730703 CACGCCAACAAAAATACAAGGATCGCATCTACCAACTTTGGGGCCAAAACTCCTTTCAAAAAAAT
389 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAAT
* * * * *
17730768 TTTAAAAAATCTCGAACCGGAAAAAGATTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGC
454 TTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGC
* *
17730833 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGTATTTACAAGCCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCATT
* * * * *
17730898 GGCATGCAAAAATGTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTA
583 GGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * *
17730963 TCTCGTCTCTCTGGCCGGCGTAGTGCCTG--C-CC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGC
648 TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTAGGC
* * * * ** * * * *
17731024 TTACGGAGTTCATTCCTAGTCTAAGATC-GCACCAGATCGAGGGTTGTGGCATCAGGATCGGCAG
713 ATACGAAGTTCATTCCTAGTCTAAGATCAG-ACCAAACCGAGGGTTACGACAGCAAGATCGACAG
* * * * * * * *
17731088 CACGTAGAGGGGGACCTGGTCGATCCCCGGCTTACGCATCCCGCCCTTTTGGCCGGCTGAGCGCC
777 CACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCC
** * * *
17731153 CGCACGCTCGTTTTGTAGGTTGACTTAGGCATACGGAGTTCATTCCC-AT-T--
842 CGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
*
17731203 -C-TA---AG---A-T--CAG----A-A-C-G----GACCGAGGGTTG-CGCTAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGC-AGCACATGCTGG
* * * *
17731245 GCTCGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGTAGCATCG-CCGAA
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAG-A
* * *
17731309 GAACCTGACCGGCGGCATTGGGGTTCCGACGAGTGGGGGGGC-CGGGGGGTGTGCGCACATGATG
129 GAACCTGACTGGCGGCATTGGGGTTCCGACGA-T-AGGGGGCTGGGGGGGTGTGCGCACATGATG
* * * * *
17731373 TGCGATGGGTGCTGGTACTTGGCCATTATATTGGCCCCTATCTCTCATCAAACCTCGAGAACTCA
192 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTTATCGCTCATCAAACCTTGAGAACTCA
* ** * *
17731438 CAACCGTTTAATGAGCATTTGAGATTTTAGAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
17731503 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCTAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTT
* * * *
17731568 TTGCATGCCAACAAAATTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
** * * * * *
17731633 AATTTTAAAAAATCTTGAGCCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCT
451 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* *
17731698 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* *** * * * *
17731763 AATGGCACACAGAAATATGAATATGTGCTTAAACCCACCTACCACCCTATTGATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * ** * * *
17731828 GCATCCTGTCTCTCTGGTCGGTGTAGTGCCCG---TTC-GCCCGCTCGTTTCGTCAGTTGGCTTA
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTA
* * * * * ** * ** ** ** ** *
17731889 GGTATATGGAGTTCATTCCCAATCTAAGATTTGATCGGATTGAGGGTTGTGGTAGCAAGATCGCC
710 GGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGAC
* * ** ** *
17731954 ACCACACAGTGGACGACCCGACCGATCCCCGGCTTGCGA-ATCCCGCCCCTCT---C-G-T----
775 AGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGC-ACATCCCGCCCCTCTGGCCGGCTGAGC
* *
17732009 ----G---G---G--T--T--G---ACTTAGGCATACGGAGTTCATTCCCAGTCTAA
839 GCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * * * *
17732047 GCGTACGGAGTTCATTGCCAGTCTAAGATTGGACCGGAACGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* ** * * * * * *
17732112 CTCGGGCATGTGCTGGAGATGCATTTTTTTTCATCGGGGCACCATCGCCAGAGCATC-ATCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGA-CAGAG
* * ** * * * *
17732176 AACCTGGCCGATGGCATTGGGGTTCC-AGCGATTGGGGGGGCCGGAGGGGCGTGCGCAC---A--
130 AACCTGACTGGCGGCATTGGGGTTCCGA-CGA-T-AGGGGGCTGGGGGGGTGTGCGCACATGATG
* * * *
17732235 --TGATGGGTGCTGGTACTTGGCCCTTATCTTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
192 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTC
* *
17732298 ATACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
17732363 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGATGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* * * ** *
17732428 TTTGCAAGCCAAAAAAAATACAAGGATCTTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* * ** *
17732493 AAATTTTAAAAAATCCCGAACCGCATAAACTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* * *
17732558 TTGCCATGAAACTTCACGTGAAGGCTTAA-GGACCATTGTATGAATTTACAGGCCACAAAATTGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA-TAG
* * * *
17732622 CATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCATCACTATCGATCCATGGCTT
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCA-CCCTATCGATCCACGGCTT
* * * * *
17732687 GCGCATCCCGTCTCTCTGGCCGGCGTAATGCCCGCCCG-CTCGCCCGCTCGTTTCATCGGTTAGC
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCT-GCCCGATCATTTCGTCGGTTGGC
* * * * * * * ** *
17732751 TTAGGCATACGAAGTTGATTCCCAGTCTAAGATCGGGCCAGACC-AAGGTTGCGGTAGCAGGATC
707 TTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATC
* * * * * * ** * ***
17732815 GGCAGCATGCAGAGGGGGACCCAACCGATCCTCGGCTTGGGCATCCCACCCCTCTGGCTAACTGA
772 GACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGA
* * * * *
17732880 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTTATTCCCAGTCTAA
837 GCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * ** * *
17732939 GCATACGGAGTTCATTGCCAGTCTAAGATCAGATCGGATAGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* ** * ** *
17733004 CTCAGGCATGTGCTGGTGATGCATTTTTCTTCG-CTGGGGCACCATTGCCGGAGCATC-ACCGGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC-GGGGCACCATCACCGGAGCATCGA-CAGA
* * * * * *
17733067 GAACCTGACCGGCGGCATTGGGGTTCCGGCCATCGGGGGGGC-CGGGGGGTGTGCGCACAAGATG
129 GAACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATG
* * * * **
17733131 TGCGATGGGTGCTGGTACTTGGCCATTATATTGGCCCCCTATCCCTCATCAAAAATTGAGAACTC
192 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTC
* * *
17733196 ACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTTCCAGTAGCCATTAAAGTTTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
17733261 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTAT-GAGTTTTTAGCTGAATGTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAAT-TTT
* * * * * *
17733325 TTTTCCATGCCAAAAAAAAAACAAGGATCACGTCTACCAAGTTTGGGGCCGAAACTCCTTCCGAA
384 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
* * *
17733390 AAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAATTAAGTCGT
449 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
* * * * *
17733455 CTTGCCATGAAACTTCTCATCAAGGCTTAAGGGACCATTGTACGAATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATA
* * * * *
17733520 GCATTAGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCTACGGCTT
578 GCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
** * * *
17733585 GCGCATCCCGTCTCTCTGGCCAACGTAGTGCCCGCCCGCCCGCCCTACCGCTCGTTTCGTCGGTT
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTG--C--CCGATCATTTCGTCGGTT
* * ** ** * * * * *
17733650 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGACCAAGGGTTACGGCGGTAGG
704 GGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAG
* * * * * * *
17733715 AT-TAGCAGCACGCAAAAGGGGACCCGGTCGATCCTCGGCTTGCGCATCTCGCCCCTCTGGCCGA
769 ATCGA-CAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGG
* * * * * *
17733779 CTGAGTGCCCGCACACTCATTTCGTGGGTTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTAA
833 CTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGA-AGTTCATTCCCAATCTAA
* * * ** * *
17733842 GTATACGGAGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * ** *
17733907 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCACCATAGCATC-ACCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGA-CAGAG
* * * * *
17733971 AACCTGA-TCGACGAG-ATTTGGGTTCCGGCGATCGGAGGGGCCGAGGGAGGGTGTGCGCACATG
130 AACCTGACT-GGCG-GCATTGGGGTTCCGACGAT-AG-GGGGCTG-GGG-GGGTGTGCGCACATG
* * ** * * * *** * *
17734034 ATGTATGACGGGTATTGGTACTTGGCCATTATATTGGCCCCCTATCCCTCAT-AAAAAATCAAAA
189 ATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAA
** * *
17734098 CTGGCACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTAGCCATTAAAGTTTCT
253 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * * * *
17734163 GAAGTGGGGTCACTTTTTTCAAATGGTCACAAAATCTTATACACTCCTAGTTTTTAGCTGAATTT
318 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TT
* * * * * *
17734228 TTTTGTCCATGCCAAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTACATCT
382 TTTTGTGCATGCC-AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * * * *
17734293 GAAATAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
446 AAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGT
* * *
17734358 CGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGGCTTAAAA
511 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAA
* * * *
17734423 ATGGCATTGGCACT-CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTCACG
575 ATAGCATTGGCA-TGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACG
* * ** * * *
17734487 GCTTGCGCATCCCGTCTCTCTGGCCGACGCAGTGCCCAACCGCCCGCCCGCTCGTTTCGTCGGTT
639 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTT
* * * * * * * * * * *
17734552 GGCTTAGGCATACGGAGTTCATTCCCAATCTAACATCGGATCGAACTGAGGGTTGCGGCAGCAGG
704 GGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAG
* * * * * ** * *
17734617 ATTTG-CGGCATGTAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGG
769 A-TCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGG
* * * * ** * * ** *
17734681 TTGAGCGCCCGCACGTTTGTTTCGTTTGTTGACTTAGGCATACGGAGTTCATTCTTAGTCTAA
833 CTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * ** * * *
17734744 GCATACGGAGTTCATTCCCAGTATAAGATCAGACTGGATCGAAGGTTGTGGCAGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** *
17734809 CTCGGGCATGTGCTGGTGCCACATTTTTTTTCGTCGGGGCACCAT---C---GC--CG--A-AGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * ** * *
17734863 ACCTGACCGGTGGTATTGGCGTTCCG--G-T---GATC-GGAGGGGGTGTCCGCACATGATGTGG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTGG-GGGGGTGTGCGCACATGATGTGT
* * *
17734921 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCACA
* *
17734986 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTAAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
17735051 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGT
* * *
17735116 GCATGCCAACAAAAATAGAAGGATCCCGTCTACCAAGTTTGGGGCCAAAAATCCTTCCAAAAAAA
388 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAA
* * ** *
17735181 ATTTT-AAAAATCCCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
* * * *
17735245 ACCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTTTGAATTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCA
* * * *
17735310 TTTGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCG
581 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
17735375 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCG--C-CC-GCCCGCTCGTTTCGTCGGTTGGATTAG
646 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTAG
* * * * ** * * *
17735436 GCATACGGAGTTCATTCCCAGTCTAAGATCACACCAGACCGAGGGTTGTGGCAGCAGGATCGATA
711 GCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGACA
* * * * * *
17735501 GCACGCAGAGGGGGACCCGA-CTGATCCCCAGCTTACGCATGCCGCCCCTCTGGCCGACTGAGCG
776 GCACGCAAAGGGGGACCCGATC-GATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCG
* * ** * * * *
17735565 CTCGCACGCACGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTGTAA
840 CCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * * *
17735621 GGATATGGAGTTCATTCCCAATCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* ** *
17735686 CTCGGGCAAGTGCTGGTGCCACATTTTTCTTCGTCAGGGCACCAT---C---GC--CG---GAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * *** * * * *
17735740 ACCTGACCGACGGCACAAGGGTTCCGGCGATCGGGGGTGCCGGGGGGGTGTGCGCACATGATATG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT-AGGGG-GCTGGGGGGGTGTGCGCACATGATGTG
* *
17735805 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC-CTTCATCAAACCTTGAGAACTCA
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGC-TCATCAAACCTTGAGAACTCA
* *
17735869 CACCCCCTTAGAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
17735934 TAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTG
* * *
17735999 TCCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTACTTCCAAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* ** * *
17736064 ATTTAAAAAAATCTTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
* * ** *
17736129 GCCATGAAACATCACGTGAAGGGTTAAGGGACCATTGTATGAATTTACAAGCTGTAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCA
* * * *
17736194 TTCGCATGTAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCTATCAATCCACGGCTTGCG
581 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * * * *
17736259 CATCCCGCCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGTCTGCTC-GTTCTGTTGGTTGGCTTA
646 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTC-GTCGGTTGGCTTA
** * * * * ** * * * *
17736323 GGCATACGGTGTTCATTCCCAATCTAAGATCAGACCAGACTGAGGGTTGTGGCAGCATGATTGGC
710 GGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGAC
* * * * *
17736388 AGCACGCAGAGGGGGACCCTG-CCGATCCCCGGCTTGCGCATCCTGCCCCTCTCGCCGGCTGAGC
775 AGCACGCAAAGGGGGACCC-GATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGC
* * * * * *
17736452 GCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTCCATTCCCAGTCTAA
839 GCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* ** * *
17736509 GCATACGGAGTTCATTCCCAGTATAAGATCGGACCAGATTGAGAGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** *
17736574 CTCGGGCATGTGCTGGTGCCACATTTTTTTTCGTCGGGGCACCAT---C---GC--CG---GAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * * ** *
17736628 ACCTGACCGGTGGTATTGGCGTTCTG--G-T---GATC-GGAGGGGGTGTGCGCACATGATGTGC
131 ACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTGG-GGGGGTGTGCGCACATGATGTGT
* * * *
17736686 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAACCCTCATCAAATCTTGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCACA
*
17736751 CCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
17736816 GGGACACTTTTTTGAAATGGTCACAAAATCTTGTACACTGT-GAGTTTTTAGCTGAATTTTTTTG
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAA-TTTTTTG
* * * *
17736880 TGCATGCCAACAAAAATAGAAGGATCCCATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* * * ** * *
17736945 ATTTTTAAAAATCCCAAACCGAAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
* * * *
17737010 GCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTTTTTGAATTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCA
** * **
17737075 TTTCCATGCAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
581 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
17737140 CATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCCGTCCGCCC-ACGCGTTTCGTCGGTTGG
646 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CC-T--GCCCGA-TCATTTCGTCGGTTGG
* * * * * *
17737204 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGCGACAGCAGGAT
706 CTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGAT
* * * * * * * * *
17737269 CGGCAGCACACAAAGTGGAACCCGACCGATCCCCGGCTTGCGCATCCTGCCCTTCTGGCCGGTTG
771 CGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTG
* * * * * *
17737334 AGCGCCCACACGCTCGTTTCGT-GGCTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
836 AGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * ** ** *
17737393 GCATACGGAGTTCATTCTCAGTCTAAGATTGAACCGGATTGAGGGTTACGGCAGCACATTCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** * * * * * * *
17737458 CTCGGGCATGTGCTGGTGATGAATTTCTCTTCGTCGGGGCACCATCGCCAGAGCATTGGCCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCA-TCGACAGAG
* * * * * *
17737523 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCT-GGGGTGTGTACGCACATCATGT
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * *
17737587 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCA
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCA
* * * *
17737652 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAATAGCCAGTAAAGTTTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
17737717 TGGGGACACTTTTTTCAAGTGGCCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTG
* * *
17737782 TCCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* ** *
17737847 ATTTTAAAAAATCCTGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
* ** *
17737912 AG-CATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCTGTAAAAATGGC
517 -GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* ** *
17737976 ATTGGCATGTAAAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCAATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * * *
17738041 GCATCCCGTCTCTCTGGCCGGCATAGTGCCTGCCCGCCCGTCTGCTCGTTTCGTAGGTTGGCTTA
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTA
* * * * * * * * * **
17738106 GGCATATGGAGTTCATTCCCAATCTAAGATCAGACTAGACTGAGGGTTGCAACAGCAAGATCGGT
710 GGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGAC
* * ** * * *
17738171 AGCACGCAGAGGGGGACCTGGCCGATCCCCGACTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
775 AGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCG
* ** * ** * *
17738236 CCCGCACGCTTGTTTCGCGGGTTGACTTATTCATACGGAGTTCATTCCCAGTCTAA
840 CCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * ** * *
17738292 GCATACGGAGTTCATTCCCAGTATAAGATCGGACCAGATCGATAGTTGCGGAAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** * * ** *
17738357 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCGGGGAACCATCGTCGGAGCATC-ACCGAAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAG-AG
* * * ** * ** *
17738421 AACTTGACCGGTGGCATTGGCATTCCG--G-T-----GATCAGGGGGTGTGCGCACATGATGTGC
130 AACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTGGGGGGGTGTGCGCACATGATGTGT
* *
17738478 GATGGGTGCGGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTTGAGAACTCACA
195 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCT-TATCGCTCATCAAACCTTGAGAACTCACA
* * *
17738543 CCCCCTTAAAAAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCCTTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
17738608 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGT
* * * *
17738673 GCATGCCAACAAAAATACAAGGATCCCATCTACCATGTTTGGGGCCAAAACTACTTCCAAAAAAA
388 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAA
* ** ** *
17738738 TTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATTGTGAAAAATAGAAAACGAGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTG
* * * *
17738803 CCATGAAACTTCACGTGAAGGTTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGAAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCAT
* * * * * * *
17738868 T-GCACGCAGAATTATGAAGATGTGACTAAACCCACCTACCACCCTATCGATCCGCGGCTCGCGC
582 TGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
** * * * * *
17738932 ATCCCGTCTCTCTCTCTGGCGTAATGCCCGCCCGCCCGCCTGCCCGCTCGTTTCGTTGGTTGGCT
647 ATCCCGTCTCTCTGGCCGGCGT-A-G--TGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCT
* * * * * * * *** *
17738997 TCGTCATACGGAGTTCATTCCCAGTATAAGACCACACTGGACCGAGGGTTGC-AGCAGCAAGATC
708 TAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGA-CAGCAAGATC
* * * * * * *
17739061 AACAGCACGTAGAGGGGGACCTGATCTATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
772 GACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGA
* * * * * * * *
17739126 GCGTCGGCACGCTCGTTTTATGGGTTGACTTAGGCACATGGAGTTCATTCCCAGTCTAA
837 GCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * *
17739185 GCATATGTAGTTTATTCCCATTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * *
17739250 CTCGGGCATGTGCTGGTGCCGCATTTTTTTTCGGCGGGGCACCAT---C--A-C-T----AGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * *
17739304 ACCTGA-TCGGCGGCACT-GGGTTTCGGCGATCGGGGGTGCCGGGGGGGTGTGCGCACATGATGT
131 ACCTGACT-GGCGGCATTGGGGTTCCGACGAT-AGGGG-GCTGGGGGGGTGTGCGCACATGATGT
** * * *
17739367 GCAATGGGTGCTGGTACTTGGCCCTTATATTGGCTCTCTAACCCTCATCAAACCTTGAGAACTCA
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCT-TATCGCTCATCAAACCTTGAGAACTCA
* * *
17739432 CACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTACTGCCAGTAGCTATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
17739497 TGGGGACACGTTTTTCAAATGGTCACAAAATCTTGCACACTGT-GAGTTTTTAGCTGAATTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAA-TTTTT
* * * * * * * *
17739561 TGTGCATGCAAAAAAAAATACAAGGATCACGACAACCATGTTTAGGGCCAAAGCTCCTTTCAAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* * * **
17739626 AAATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTATC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* * *
17739691 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGTCCATTGTATGAATTTAGAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAG
* * * * * *
17739756 CATTGACACGTAGAAATGTGATGATGTGCCTAAACCCACCTACCACTCTATCGATCCACGGCTTG
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * *
17739821 CGCATCCCGTCTTTCTGGCCGACATAGTGCCCTCCCGCCCGTCCGCCC-ACTCGTTTGGTCGGTT
644 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CC-T--GCCCGA-TCATTTCGTCGGTT
* * * * ** **
17739885 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGATGGAGGGTT--GTAGCAGC-
704 GGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACG-A-CAGCA
** * * * * *
17739947 AGTATCGGTAGCACGTAGAGGGGGACCCG-GCTGAACCCCGGCTTGCGCATCCCGCCCCTCTGGC
767 AG-ATCGACAGCACGCAAAGGGGGACCCGATC-GATCCCCGGCTTGCACATCCCGCCCCTCTGGC
* * * * * *
17740011 CGGCTGAGCGCCTGCACGCTCGTTTCGTGGGTTGACTTAAGCATATGGAGTTCATTCCCAATCTA
830 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTA
17740076 A
895 A
* ** ** *
17740077 GCATACAGAGTTCATTCCCAGTCCT-AGATCGGACTGGACCGAGGGTTACGACAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGT-CTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGG
* * * * * * ** * * *
17740141 GCTCGTGCTTGTGCTGCTGCTGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATTGCCGGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAG
* * * * * ** * *
17740206 ATCCTGACCGGCAGCATTAGGGTTCTGGTGATCGGGGGGGC-CGGGGGGTGTGCGCACATGATGT
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * * * *
17740270 GCGATGGCTGCTAGTACTTGGCCCTTATATTGGCCCCCTATC-CATCATCAAACCTCGAGAACTC
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGC-TCATCAAACCTTGAGAACTC
* *
17740334 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCAATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * **
17740399 ATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTATACTTTAAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* * * * *
17740464 TGTGCATGCCAAAAACAAAATACAGGGATCACGTCTAGCAAGTTTGGGGCCAAAAATCCTTTCAA
385 TGTGCATGCC-AACA-AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * * ** * *
17740529 AAAAATTTTAAAAAATCTTC-AACCGTAAAAATTTTTGAAAATCGTGAAAAATAGAAAACGAGTC
448 AAAAATTTTAAAAAATC-CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTC
17740593 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAT
512 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAT
* *** * * * *
17740658 TGCATTGGCACACAGAAATATCAAGATGTGCCTAAACCCACCTACCTCCCTATCGATCCACGGCG
577 AGCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * * * * * *
17740723 T-AG--T---G-C-C-C--GCCTGC-T--TACCCACCCG--T------TCGTTTCGTCAGTTAGC
642 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGC
* ** * * * * * *
17740766 TTAGGTATAC-AGAGTTCATTCGCT-GTCTAAGATTGGATCAGACTGAGGGTT-CTAGTAGCAGG
707 TTAGGCATACGA-AGTTCATTC-CTAGTCTAAGATCAGACCAAACCGAGGGTTACGA-CAGCAAG
* ** * * ** * * * * * *
17740828 ATTGGTAGCAAGCAGAGGGGGACTTGGTTGATCACCGGCTTGCGCATCCTGCCCCAT-TGGACGG
769 ATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCC-TCTGGCCGG
* * * * * * * * * *
17740892 CTGAGCGCCCGTACGTTCTTTTCGTGGGTTGACTTAAGCATGCGAAATTCATTCCCAGTCTAG
833 CTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* *
17740955 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACC-GAACCGAGGATTGTGGCAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGTGGCAGCACATGCTGG
* * * **
17741019 GCTCAGGCATGTGCTGGTGCCATATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCG-CAGGA
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACA-GA
* * * * *
17741083 GAACCTGACCGACGGTATTGCGGTTCCGACAATCGAGGGGGCCT-GGGGGGTGTGCGCACATGAT
129 GAACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGG-CTGGGGGGGTGTGCGCACATGAT
* * ** **
17741147 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATGTCAAGAACT
191 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACT
* *
17741212 CACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTCGCCATTAAAGTGTCTGA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
17741277 AATGGGGACAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTT
* * * *
17741341 TTTTGCATGCCAACAAAAATACAAGGATCATGTCTAACAAGTTTGGGGCCAAAACTCCTTCCGAA
384 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
* * *** * * *
17741406 AAAATTTAAAAAAATCCTGAACTTTAAAAAGTTTCAAAAATTATGAAAAATAGAAAACGAGTCAT
449 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
* *
17741471 CTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATA
*** * *
17741536 GCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACTGCTT
578 GCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * **
17741601 GCGCATCTCGTCTCTCTGGCCAGCGTAGTGCCCGCCCGCCCGCCCGCCCACTCGTTTTATCGGTT
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCG---A-TCATTTCGTCGGTT
* * * * * ** *
17741666 GGCTTAGGCATACGGAGTTCATTCCCATTCTAAGATCAGACCGAATCGAGGGTTGTGGA-AGCAG
704 GGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTT-ACGACAGCAA
* * * * * * *
17741730 GATCGACAGCACGTAGAGGGGCACCCGATCGATCCTCGGCATGCGCATCCCGCCCCTCTGGCCGA
768 GATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGG
* * * * * * * *
17741795 CGGAGCGCCCGCATGCTCGTTTCGTGGGTTGAGTTAGGCATACGGAGTTGATTCCCAGTCTAA
833 CTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * *
17741858 GCATACGGAGTTCATTCCTAGTCTAAGA-CTGGACC-GAACTGAGAGTTACGGTAGTAGGATCGA
1 GCATACGGAGTTCATTCCCAGTCTAAGATC-GGACCAG-ACCGAGGGTT---GT-G--GCA--G-
* * ** * * ** * * * * *
17741921 CAGCATG-TAGAGGGGGACCCGGTCGAT-CCCTGGCTTG-CGCATCTCGC-CCCTCTGGCCGATT
55 CA-CATGCT-----GGG-CTCGGGC-ATGTGCTGG--TGCCGTATTTTTCTTCGTCGGGGC-A-C
* * * *** * *** ** * * *** * ****
17741982 GAGCACCCGCACGC-TCGTTTTGTG-GGTTGACT-TAGGCATACGGAGTTCATTCCCAGT-CTAA
108 CATCA-CCGGA-GCATCG-ACAGAGAACCTGACTGGCGGCAT-TGGGGTTC-CGACGA-TAGGGG
** ** * * * * * * *
17742043 GCATACGAAGTTCATTCCCAATCTAAGATCG-GACCGGATCGAGGGTTGC-GACAGCACATGCTG
167 GC-TGGGGGGGT-GTGCGC-A-C-ATGAT-GTG---TGAT---GGG-TGCTG---GTAC-T--TG
* ** ** ** ** * * * * ***
17742106 G-GCTTGGGCA-TGTG--CTGGTGCAGCATTTTTC-TTCGTCGGGGCAC-CATCACCGGAGTATC
213 GCCCTT--ATATTG-GCCCTTAT-C-GC--TCATCAAACCT-TGAGAACTCA-CACC-CCCT-T-
** * ** ** ** *** *
17742165 ATCGGAGAACCTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTGCGCACA
266 A-AAGAGCATTTGA------G-ATT----TT---AC-A------GGTTTGCTGCCAGT-AGC-C-
* * * * * * ** * * ** * **
17742230 GGATGTGCGATGGGTGCTGGTACTTGGCCCCCTATTCCTCATCAAACCTCGAGAACTCACAACCC
306 --AT-T--AAAGTGT-CT-GAAATGGGGACACT-TT--T-TTCAAA--T-GGT--CACA-AAATC
* * * * ** * ** *
17742295 TTTAGTGAGCA-TTTGAGATTTTA-CAG-GTTTGCTG-CCAGTGGCC-ATTAAAATGTCTGAAAT
354 -TT-GT-A-CACTTCGAGTTTTTAGCTGAATTTTTTGTGCA-T-GCCAACAAAAAT-AC---AA-
* * ** * * * **** ** ***
17742355 GGGGA-CACTTTTTTCAA--AT-GGTCACAAAA-TCTTGTACACTTCGAGTTTTTAGCTGAATTT
408 --GGATCACGTCTACCAAGTTTGGGGC-CAAAACTCCT-T-C-CAAAAAAATTTTA----AAAAA
*** ** * ** * ** ** ** * * *
17742415 TTTTGTGCATGCCAACAAAAATACAAGGATCATG-----TCTACCA--AGT-TTGTGGCCA--AA
463 TCCCGAAC-CG-CAA-AAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAA
*** *** *** ** * **
17742470 ACTCCTTTCA-AAAAATTTTTAAAAAATCCCGAACCGTA-GAAAGTTTCAAAAATCATGAAAAAT
525 A---C-TTCACGTGAAGGCTTAAGGGA--CC--ATTGTATG-AA-TTT-ACAAGCCAT--AAAAT
* * * * * * ** *** **
17742533 AGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGTGACCATTGTATGAATTTAC
577 AG--CAT---T-GGCATG-TA-GAAA--T-A--TGAA-G---ATGCG-CC--TAAACCCACCTAC
* * *** ** * * *** *** * ** ** * ***
17742598 AAGCCATAAAAATGGGATTGGCACATAGAAATATGAAGATGTGC-CTAAACCCACCTACCACCCT
622 CA-CCCTATCGAT-CCA-CGG--C-TTG-CGCATCCCG-TCT-CTCT-GGCCGGCGTA-GTGCC-
* * * * * ** * *
17742662 ATCGATCCACAGCTTGCGC-TTCCCGTTTC-TCTGGCTGGGGTAGTGCCCGCCCACCCACCCGCC
675 --CG--CC-C-GCCTGCCCGAT--CATTTCGTC-GGTTGGCTTA--G---G--CA--TA--CG-A
* * * * * ** ** * *
17742725 CGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCTA--GTCTAAGATCAGACCGGAC
719 AGTTC-ATTCCT-AG-T--C-TAAG-AT-C--AGACCAAACCGAGGGT-TACGA-CAG--C--A-
* * * * **
17742788 CGAGGGTTGGGGTAGCAGGATCAACAGCACACAGTTGGGGGACCCGACCGATTCCCGGCTTGTGC
767 --A--GAT--CG-A-CA-G--C-AC-GCA-A-A---GGGGGACCCGATCGATCCCCGGCTTGCAC
* * * * * * * * *
17742853 ATCACACCCTTCTGGCTGGCTAAGCGCCCCCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGA
814 ATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAA
* *
17742918 GTTCATCCCCAGTCTAA
879 GTTCATTCCCAATCTAA
* * ** *
17742935 G-AT--TG-G---------A--CT--G-T--------ACTGAGGGTTACGGCAGCACTTGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** ** * * *
17742974 CTCGGGCATGTGCTGGCACCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATTGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * ** * * * * *
17743039 GCTTGACCAGTGGCATTGGGGTTCCGGCGATCAGGGGGCCGGGCGGGGTGTGTGCCCATGATGTG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT-AGGGGGCTGGG-GGGGTGTGCGCACATGATGTG
* * * **
17743104 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCAC
* * * * *
17743169 ACCCACTTAAAAAGCATTTGAGATTTTACAGATTTGCTGCCAGCAGCCTTTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
17743234 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT-GCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTG
* * * * *
17743298 TGCATTCCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTCTTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* * * * *
17743363 ATTTTAAAAAATCTCGAACCACAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
** * * *
17743428 GCCATGAAACTTCACGAAAAGGCTTAAGGGACCATTGTATGAATTTGCAACCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCA
* * **
17743493 TTGACACGTAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
581 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * * *
17743558 CATCCCGTCTCTCTGACAGGCGTAGTCCCCGCCTGCCCGCCC-ACTCGTTTCGTTGGTTGGCTTA
646 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGA-TCATTTCGTCGGTTGGCTTA
* ** ** * * * * *
17743622 GGCATAC-AGAGTTCATTCCCAGTCTAAGATTGGACCGGACCAAGGGTTACGGCAGCAGGATTGG
710 GGCATACGA-AGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGA
* * * * * * * *
17743686 CAGCACGCAAAAGGGGACCCGACCGATCCCCAGCTTGCGCATCCCACCCCTCTTGCCTGCTGAGT
774 CAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGC
* ** ** * **
17743751 GCTCGCACGCTCGTTTTGTGGGTTGCCTTAGGCATACGGAGTTCATTCCCGGTCTAA
839 GCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* ** * *
17743808 GCATACGAAGTTCATTCCCAGTCTAAGATAAGATCAGACCAAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** * * ** * *
17743873 -TGCAAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGTCGGAG
66 CT-CGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAG
* * * * * *
17743937 TACCTGACCGACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGAGGTGTGCGCACATGATG
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGG-GGTGTGCGCACATGATG
* * * * **
17744002 TGCGATAGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTC
192 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTC
*
17744067 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
17744132 ATGGGGACACTTTTTTCAAATGGTCACAAATTCTTATACAGTTCGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* * * *
17744197 TATGCATGCCAACAAAAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAAATCCTTCCGAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
** * * * **
17744262 AAATTTTAAAAAATCCTTAATCGCAAAAAATTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* * * *
17744327 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAAGAATTTAGAACCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAG
* *
17744392 CATTGGCATGTAGAAATATGAAGATGTGCCTAAATCCACCTACCACCCTATCGATCCACGGCTTG
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * * * *
17744457 TGCGTCCCGTCTCTCTGGCTGACATAATG-CC-CAC-CC-GCCCGCTCGTTTCGTCGGTTGGCTT
644 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTT
* * * * * * ** * *
17744518 AGGCATACCG-AGTTCATTCCCATTCTAAGATCGGATCGAACCGAGGGTTGCGGTAGTAGGATCG
709 AGGCATA-CGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCG
* * * * * * ** * * *
17744582 GCAGCACGTAGAGGGGGATCAG-GCAGATCCTTGGCTTACGCATCCCGCCCCTCTGGCCGACTGA
773 ACAGCACGCAAAGGGGGACCCGATC-GATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGA
* * * ** * * *
17744646 GTGACCGCACGCCCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
837 GCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* *
17744705 GCATACGGAATTCATTACCAGTCTAAGCATACGAAGTCAATTCCCAGTCTAAGATCAGACCAAAC
1 GCATAC-G------------G----AG--T------TC-ATTCCCAGTCTAAGATCGGACCAGAC
** * ** * ** **
17744770 CGAGGGTTACGGTAGCACATAATGGGCTTGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGG
40 CGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGG
* * * * *
17744835 CACCATCGCCAGAGCATCGCCAGAGAGCCTGA-TCGGCGGCATTGGGGTTCCGACGATCGTGGGG
105 CACCATCACCGGAGCATCGACAGAGAACCTGACT-GGCGGCATTGGGGTTCCGACGAT--AGGGG
* * * *
17744899 GCCGGGCGGGGTGTGCGCCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
167 GCTGGG-GGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCT
* * * *
17744964 TATCCCTCATCAAACCTTGAGAACTAATACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGC
230 TATCGCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
** *
17745029 TGCCAACAGCCTTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
295 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * * *
17745094 ACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATAGAAGGATCACATCTACCAA
360 ACTTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA
* * * * * **
17745159 GTTTGGGTCCAAAACTCTTTCTAAAAAAGTTTTAAAAAATCCCGAGCCATAAAAAGTTTCAAAAA
424 GTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAA
* * * * *
17745224 TCATGAAAAATAGAGAACGAGTCGTCTTGCCATGAAACTTTACTTGAAGGCCTAAGGGACCATTG
489 TCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTG
* * * * * *
17745289 TATGAATTTAGAAGCTATAAAAATGGCTTTGGCACGTAGAAATATGAAGATGTGCCTAAACCCAC
554 TATGAATTTACAAGCCAT-AAAATAGCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCAC
* *
17745354 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCTCC
618 CTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCC
* * * * *
17745419 CGGCCGCTCGTTTCGTCGGTTGG-TTGAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCG
683 TGCCCGATCATTTCGTCGGTTGGCTT-AGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACC-
* * * ** * ** ** * ** *
17745483 GAA-TGAGGGTTGCGGTAACGGGATCGGTAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTG
746 AAACCGAGGGTTACGACAGCAAGATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTG
* * * * * * * * *
17745547 CGCATCCTGCCCCTTTGGTCGGTTGAGCACCCGCACGCTCGTCTCATGGGTTGACTTATGCATAC
811 CACATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATAC
* * * *
17745612 GGAGTTCACTCCTAGTCTAA
876 GAAGTTCATTCCCAATCTAA
* * * * * **
17745632 GCATATGGAGTTCATTACAAGTCTAAGATCAGACCAGACCGAGTGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* ** * * * * * *
17745697 CTCGGGCATGTACTGGTGCCACATTTTTCTTTGCCGAGGCACCATCCCCGGATCATC-ACCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGA-CAGAG
* * * * * * * * *
17745761 AACCTGACTGACGGTAAT-GGG-TCTGGCGATCGGGGGGGC-CGGGGGGTGTTCGCACATTATGT
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGT
** * * *
17745823 GCAATGGGTGGTGATACTTGGCCCTTATATTGGCCCCCTAT-GCCTCATCAAACCTTGAGAACTC
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCG-CTCATCAAACCTTGAGAACTC
*
17745887 ACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
17745952 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TTTT
* * *
17746017 TGTGCATGCCAACAAAAATGCAAGGATCACGTCCACCAAGTTTGGGGCCAAAACACCTTCCAAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAA
* * *
17746082 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
449 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
* *
17746147 CCTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG-ATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATA
* * * * * **
17746211 GCATTAGCACGAAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACACCTT
578 GCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
** * * * * * *
17746276 GCGTGTCTCGTCTCTCTGGTCGACGTAGTGCCCACCCGCCCGTCCGCCCGCTCGTTTCGTCGGTT
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CC-T--GCCCGATCATTTCGTCGGTT
* * * * * * ** *
17746341 GGCTTAGGCATAATG-AGTTCATTCCCAGTCTAAGATCGGATCAAACTGAGGGTTGCGGTAGCAG
704 GGCTTAGGCAT-ACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAA
** * * ** * * * *
17746405 GATCGGTAGCACGCAGAGGAGGACCCGGCCGATCCTCGGCTTGCGCTTCCCGTCCCTCTGGCCGG
768 GATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGG
* * * * ** * * * *
17746470 TTGAGCGACCGCACCCTTGTTTTGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
833 CTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
**
17746533 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
** **
17746598 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCAT---C---G--TCG---GAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* ** * * * * * * *
17746652 GCCTGACCAGCAGTATTGGGGTTCCAACGATCGGGGGGGCCGGGCGAGGTGTGCGCCCATGATGT
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGG-GGGGTGTGCGCACATGATGT
* * * * *
17746717 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAACCTCGAGAACTCA
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCA
*
17746782 CACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
17746847 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGCATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTT
* * *
17746912 GTGGATGCC-ACAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAA
386 GTGCATGCCAAC-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* * ** *
17746976 AAATTTTAAAAAATCCCGAACTGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* * * * ** *
17747041 TGGCCATGAAACTTCACCTAAAGGCCTAAGGGACCATTGTATGAATTTACAAGTTATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAG
** * * * *
17747106 CATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACTCTATCGATCCACGGGTTA
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * **
17747171 CGCATCCCGTCTCTGTGGCCGGCGTAGTGCTCGCCCGCCCGCTCGCCTACCCGCTTGTTTCGTCG
644 CGCATCCCGTCTCTCTGGCCGGCGTA--G-T-GCCCG--C-C-CGCCTGCCCGATCATTTCGTCG
* * ** * * * **
17747236 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGTAGC
701 GTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGC
* * * * * * * * *
17747301 AAGATCGGCAGCACGCAGAGGGGGACCTG-GCTAATCCCCTGCTTGCGCATCCCACCCCTTTGGC
766 AAGATCGACAGCACGCAAAGGGGGACCCGATC-GATCCCCGGCTTGCACATCCCGCCCCTCTGGC
* * * * * * *
17747365 CGACTGAGCGCCCGAACTCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
830 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTA
17747430 A
895 A
* * *** * *
17747431 GCATATGGAGTTCATTCCTAGTCTAAGATCGGATGGGACCGAGGGTTATGGCTGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * ** *
17747496 CTCGGGCATGTGCTGGTGTCGCATTTTTCTTCGTTGGGGCACCATCGTCGGAGCATCGTCAGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * *
17747561 ACCTGACCGGCAGCATTGGGGTTCCGGCGATCGAGGGGG-TCGGGGGGTGTGCGCACATGATGTG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* *
17747625 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTT-T-GCCTCA-CAAACCTCGAGAACTC
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG--CCCTTATCG-CTCATCAAACCTTGAGAACTC
* *
17747687 TCACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
17747752 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* *
17747817 TATGCATGCCAACAAAAATACAAGGATCTCGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* * * * *
17747881 AAAGTTAAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
*
17747946 GTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA-ATG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAATA-G
* * ** * *
17748010 CCATTGGCACGCAGAAATATGAAGATGTACCTAAACCCACCAACCACCC-ATTGATCCACGGCTT
579 -CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * * *
17748074 GCGCATCCCGTCTCTTTGGTCGGCGTAGTGCCCGCCTGCCCGCCCGCTCGCTCGTTTCTTCGGTT
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-GCCCGCCTGCCCGATCATTTCGTCGGTT
* * * * * ** * *
17748139 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCATACCGAACAGAGGGTTGTGGCAGCAGG
704 GGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAG
* * * * * * * * * * ** ** *
17748204 ATAGGCAACATGCAGAGGGGGATCCGATCGATTCTCGGGTTGCGCATCTTGCCCCTCTAACCTGC
769 ATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
* * * * *
17748269 TGAACGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCATGTCTAA
834 TGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCA-ATCTAA
* * * * *
17748331 GCTTACAGAGTTCATTCTCAGTCTAAGCATACAGAGTTCATCAGACCGGACCGAGGGTTGTGACA
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C---G-------GACCAGACCGAGGGTTGTGGCA
* * * * * ***
17748396 ACACATGCTAGGCTCGGGCATGTGCTAGTGTCATATTTTTCTTCGTCGGGGCACCATTGTCGGAG
54 GCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAG
* * * *
17748461 CATC-ATCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTG
119 CATCGA-CAGAGAACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTG
** * * *
17748525 CGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCGCTATCCCTCAACAAAC
181 CGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC-TTATCGCTCATCAAAC
* * ** *
17748590 CTCGAGAACTAACACCCCCTTAACTAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTA
245 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
*
17748655 AAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
310 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
** * *
17748720 CTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCTTGT-TAACAAAGTTTCGGGCCAAAA
375 CTGAATT-TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT-ACCAAGTTTGGGGCCAAAA
* * * *
17748784 CTCTTTCCAAAAAAATTTTAAAATATCCCGAACCACAAAAAGTTTCAAAAATCTTGAAAAATAGA
438 CTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGA
* *
17748849 AAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
503 AAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
17748914 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
568 CCAT-AAAATAGCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCG
* ** * ** *
17748979 ATCCACGGCTTGCGCATCCCCGTCTCTCTGGTCGATGTAGTGCCCACCCGCCCACCCTCCTGCTC
632 ATCCACGGCTTGCGCAT-CCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CC-TGC-CC-GATC
* * * * ***
17749044 GTTTCATCGGTTGGCTCAGGCATACGAAGTTCATTCCCAGT-TGAAGATCAGACTGGA-CGAGGG
692 ATTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCT-AAGATCAGACCAAACCGAGGG
** ** * * * * * * ** *
17749107 TTGTGGTAGTAGGATCGGCAGCACACAAAGGGGGACCCGAT-GATCCCCGGATTACGTATCCCAC
756 TTACGACAGCAAGATCGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGC
* * ** * * *
17749171 CCC-CTGGCCAGATGAAAGCCCGCACGCTCGTTTCATGGGTTGACTCAGGCATACGGAGTTCATT
821 CCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATT
*
17749235 CCCACTCTAA
886 CCCAATCTAA
* * ** *
17749245 GCGTACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * ** ** * *
17749310 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCAAGGCACCATC-GTGGAAGCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGG-AGCATCGACAGAG
* * * * * *
17749374 AACCTGACCGACGACATTGGGGTTCCAACGATCGGAGGGGT-GGGGGGTGTGCGCACATGATGTG
130 AACCTGACTGGCGGCATTGGGGTTCCGACGATAGG-GGGCTGGGGGGGTGTGCGCACATGATGTG
** * * * *
17749438 CAATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCAC
* *
17749503 ACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
17749568 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTTG
*
17749633 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* * **
17749698 TTTTTACAAAAAT-CAGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCT
452 ATTTTA-AAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* ** *
17749762 TGCCATGAAACTTCACGTGAAGGCTTAGGGGACTGTTGTATGAATTTACAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* * *
17749827 ATTGGCACGTAGGAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
17749892 GCATCCCGTCTCTCTGTCCGGCGTAGTGCCCACCCG-CTCGCCCGCTCGTTTCTTCGGTTGGATT
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCT-GCCCGATCATTTCGTCGGTTGGCTT
* * * * * *
17749956 AGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTG
709 AGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCA-A-GATC
* * ** * * * *** ** * ** * ** *
17750021 GGC-TCGGGC-ATGTGCTGGG-GCTGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC--G
772 GACAGCACGCAAAG-G--GGGACCCG-ATCGATCCCCGGC-TTGCA-CATC--CCGCCCCTCTGG
** * * ** ** * *
17750081 CC-G--GAGAACCCG-AC-CGACG--ACATTGGGTTCCAACGATTAGGGGGGT-CGGGGGGT-GT
829 CCGGCTGAGCGCCCGCACGC-TCGTTTCA-TGGGTT--AAC--TTA--GGCATAC-GAAGTTCAT
* * * *
17750137 GCGCAA-ATGA
885 TCCCAATCTAA
* * * ** * * *
17750147 -TATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGATTTGCGGCAGCATATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * *
17750211 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTC---GAAGCAT--CC----C--CG---GAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
** * * * * **
17750262 ACCTGACTGATGGCATTGAGGTTCTGGCGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGTG
** * * *
17750327 CAATGGGTGCTGGTACTTGTCCCTTATATTGGCCCCTTATCCCTCATCAAACCTGGAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCAC
*
17750392 ACCCCCTTAAACG-GCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAA
258 ACCCCCTTAAA-GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
17750456 TGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCTAGTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTT
* * * * **
17750521 GTGCAAGCCAATAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACACCTTCGGAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* ** * * * * * *
17750586 AATTTTAAAAAATCCCGAATCATAAAAATTTTCTAAAATCGTGAAAAATGGAAAACGAGTTGTCT
451 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* * *
17750651 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGCATGAATTTGCAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
* * *
17750716 ATTGGCA-GCAGAAATATGAAGATGTGCCTAAACCCACCTTCCACCCTATCGATCCACGGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * ** * * *
17750780 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCATGCTCGTTTCGTCGGTTTGCTTA
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTA
* * * * * ** * * ** *
17750845 GGCATACGGACTTCATTCCCATTATAAGATTGGACCAGACTGAGGGTTGTGGCAGCAAGATCGAC
710 GGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGAC
* ** ** * * *
17750910 AGCACGCAGAGGGGGA-CCGGCCGATCCCCGGCTTGTGCATCCCGTCCCTC-GGCCGGTTGAGCA
775 AGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCG
* *
17750973 CCCGCACGCTCGTTTC----G------T--G-----G--GTTGA----C--T-TAG
840 CCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * ** *
17751003 GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCAGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * * * ** * *
17751068 CTCGGGCATGTGCTGGTGCTGCATTTGTCTTCGCCAGGGCACCATCGTCGGAGCATCGCCAGGGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * * * * * ** *
17751133 CCCTGACCGACGACGTTGAGGTTTCGACGATCGGGGGGGGCCGGGGGGTGTGCGCAAATGATGTG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTG--GGGGGGTGTGCGCACATGATGTG
* * * * * *
17751198 CGATAGGTGCTGGTATTTGGCCCTTATATTGGCCCCTTACCTCTCATCAAACCTCGAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCAC
* * *
17751263 ACCCCCTTAAAGAGCATTTCAGATTTTATAGGTTTGCTGCCAGTAGCCATGAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
17751328 GGGGACACTTCTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAAGTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTG
* * * * *
17751393 TACATGCCAAAAAAAATACAAGGATCACGTGTACCAAGTATGGGGCCAAAACTCCTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* * * * *
17751458 ATTTAAAAAAATCCCGAACCGTAAAATGTTTCAAAAATCATGAAAAATAGAACATGAGTCATCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
*
17751523 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTAG-ATGAATTTACAAGCCATAAAAATGGC
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT-GTATGAATTTACAAGCCAT-AAAATAGC
* * * *
17751587 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAGCACCCTATCGATCCACGGCTTAC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * * *
17751652 GCATCCTGTCTCCCTGGCCGGCATAGTGCCCG---TCC-GCCCGCTCGTTTCGTCGATTAGCTTA
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTA
* * * * * * * * * * * *
17751713 GGCATATGGAGTTCATCCCCAGTCTAAGA-CTGGACTAGACTGAGGGTTGCGGCAGCAGGATCAA
710 GGCATACGAAGTTCATTCCTAGTCTAAGATC-AGACCAAACCGAGGGTTACGACAGCAAGATCGA
* * * * * * * * *
17751777 CAGCACACAGAGGGGGACCTGACCGATCCCCGGCTTACGCATCCTGCCCCTCTGGCCGGTTAAGC
774 CAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGC
* * * * *
17751842 GCCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
839 GCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * *
17751899 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGCTTGTGGCAGCACATCCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * ** * *
17751964 CTCGAGCACGTGTTGGTGATGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC-ACCGAAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAG-AG
** * * * * *
17752028 AACCTGACCAGCGGTATTGGGGTTCCGGCGATCGAGGGGTCGGGGGGGGTGTGCGCACATGATGC
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGT
* * * * * *
17752093 ATGATGGGTGCTGGTACTT-GACCTTATATTGGCCCCCTATCCCTCATCAACCCTCGAGAACTCA
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCA
* *
17752157 TACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCGGTAGCCATTAAAGTGTCTG-AA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
17752221 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTT
* * * * * * *
17752286 GTGCAAGCCAAAAAAAATACAAGGATCATGTCTAACAAGTTTGGGGCCAAAACACCTTTCGAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* * ** * *
17752351 AATTTT-AAAAATCCTGAACAGTTAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCT
451 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* * *
17752415 AGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGGCATAAGAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA-AATAGC
* * * * **
17752480 GTTGGCATGCAGAAATATGAAGATGTGCCTAAACCCA-CTACCAGCCTATCGATCCATAGCTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
*
17752544 GCATCCCGTCTCTCTGGCCGGCGTAGCGCCCGCCCGCCCT-CCCGCA-CATTTCGTCGGTTGGCT
645 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-CCTGCCCG-ATCATTTCGTCGGTTGGCT
* * * *
17752607 TAGGCATACGGAGTTCATTTCC-AGTCTAAGATCAGATCAAACCGAGGGTTACGATAGCAGGATC
708 TAGGCATACGAAGTTCA-TTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATC
* * * ** ** * *
17752671 GGCAGCACGCAGAGGCGGACCCGGCCGATCCCCGGGGT-CACGCATTCCGCCCCTCTGGCCGACT
772 GACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCA--CATCCCGCCCCTCTGGCCGGCT
* *
17752735 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
835 GAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
17752796 G-AT-C-G-G---------A--C-----T--G----GACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* ** * *** *
17752835 CTCGGGCATGTGTTGGTGCCACATTTTTCTTCGTCAGGGCACCATCATTAGAGCATCGCCAGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * * * * *
17752900 ACATGACCGGCGGCATTGGGGTTTCGACGATCGGGGGGGCCGAGGGGGTGTGCGCACATGATGCG
131 ACCTGACTGGCGGCATTGGGGTTCCGACGAT--AGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* ** * *
17752965 CGATGGGTGCTGGTACTTGGCCCTTATATTTTCCCCCTATCTCTCATCAAACCTTGAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATA-TTGGCCCTTATCGCTCATCAAACCTTGAGAACTCAC
* *
17753030 ACCCACTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
17753095 GGGGACACTTTTTTCCAAA-GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
323 GGGGACACTTTTTT-CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTT
* * * * * * *
17753159 GTGCATGCCAAAAAAAATACAATGATCTCGTCTACCAAGTTTGGGGCCAAAAATCCTTTCGAGAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* * * **
17753224 AATTTTAAAAAATCCCAAACCACAAAAAGTTTCTAAAATCATGAAAAATAGAAAACAAGTCGTCT
451 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
* * *
17753289 TGCCATGAAACTTCACGTGAAGGCTTAAGGGAGCATTGTATGAATTTAAAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGC
*** * * *
17753354 ATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGC
580 ATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
17753419 TCATCCCGTCTCTCTGGCCGACGTAGTGCCCGTCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGG
645 GCATCCCGTCTCTCTGGCCGGCGTAGTG--C--CCGCCCGCCTGCCCGATCATTTCGTCGGTTGG
* * * * * * * *
17753484 CTTAGGCATATGGAGTTCATTCCTAATCTAAGAT-TGAACAGGACCGAGGGTTATGGCAGCAAGA
706 CTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCA-AACCGAGGGTTACGACAGCAAGA
* * * * * * * *
17753548 TCGGCAGCACGC-AGGGGGAGACCCGACCGATCCTCAGCTTGCGCATCCTGCCCCTCTGGCCGTC
770 TCGACAGCACGCAAAGGGG-GACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
** * * * ** *
17753612 TGAGCGCCCGCACGCTCGTTTCGCGGGTTGATTTAGGCATACGGAGTTCATTCTGAAACTAA
834 TGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * * * *
17753674 GCATATGAAGTTCATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGTTTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * ** **
17753739 CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCACCGGGTTACCATCACC---G----GAC----A
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
* * * *
17753793 ACCTGACCGGCGGCATTGGGGTTCCGACGATTGGGGGGCCGGGGGGGTGTGTGTGCACATGATGT
131 ACCTGACTGGCGGCATTGGGGTTCCGACGA-TAGGGGG-CTGGGGGG-GTGTGCGCACATGATGT
* * **
17753858 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCA
193 GTGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCCTTATCGCTCATCAAACCTTGAGAACTCA
*
17753923 CACCCCCTTAAAGAGCATTTGATATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
257 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
17753988 TGGGGACACTTTTTTCCAAA-GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
322 TGGGGACACTTTTTT-CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTT
* * * *
17754052 TGTGCATGCCAACAAAAATACAATGATCACATCTTCTAAGTTTGGGGCCAAAACTCCTTCCAAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* * * * *
17754117 AAATTTTAGAAAATCCCAAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAATAAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
* *
17754182 TTACCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAG
* * *** * *
17754247 CATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAAACATA
579 CATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * *
17754312 TGCATCCCGTCTCTCTAGCCGGTGTAGTGCCCGCCCACCCGCCTGCCAGCTCGTTTCATCGGTTG
644 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG----CCCGCCTGCCCGATCATTTCGTCGGTTG
* * * * * ** * * * *
17754377 GCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCAAATCGGACCAAGGGTTGCGGCAGCAGGA
705 GCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGA
* * * * ** * * *
17754442 TCCG-CAGCACACAGAGGGGGACCCGACCGATCTCCGGCTTGTGCATCCCGCCTCTCTTGCTGGC
770 T-CGACAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGC
* * * * ** * * ** ** *
17754506 TAAGTGCCCGCACG--C---TCA-GAGTTCA-TT-CCCAGT-CTAAGATCAGACCGGA-CTGAG
834 TGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCA-TACGAAGTTCATTCCCAATCT-AA
** ** * * * * * * * *
17754560 GGTTACGGTAG--CA----CA-TGCTGGGCTCGG-GC--A-TG-TGCTAGT-GCTGCATAT-CT-
1 GCATACGG-AGTTCATTCCCAGT-CTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTG
* ** * * *
17754610 --CATC-GTC--G-G--GGCACC--A----TC-TC--C--GG-AGCATCACCGGAGAACCTGACC
64 GGC-TCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATC-GA-C
* * * * ** ** * ** * * *** * **** *
17754655 CGTG-GCTTTGGGGTTTCGGTGA-TGGGGGGCGGAGGGGCGGTGTGC-GCACATGATGTGCG-A-
126 AGAGAAC-CT-GACTGGCGG-CATTGGGGTTCCGACGATAGG-GGGCTG-GGGGGGTGTGCGCAC
* * ** ** ** * *** * *
17754715 ATGGTGCTG-GTACTTGGCCCTTATA-TTGGCCC-CCTA-T--CCCTCATCAAACCTCAAGAAC-
186 ATGATG-TGTG-A-TGGGTGCTGGTACTTGGCCCTTATATTGGCCCTTATCGCTCATCAA-ACCT
* * * * * *** * * * * * * * ***
17754773 TCACACCCCCTTAAAGAGCATT--TGA-TATTTTACAGGTTTGCTGCCA-G-TAGCCATTAAAGT
247 TGAGA---ACTCACACCCCCTTAAAGAGCA-TTT-GAGATTT--T-ACAGGTTTG-C-TGCCAGT
* * ** * ***** **** ** *
17754833 -GTC-TGAAA-TG-GGGACACTTTTTTCCAAAGGTCACAAAATCTTGT-AC---A-C-T------
302 AGCCATTAAAGTGTCTGA-A-ATGGGGACACTTTTTTC-AAA--TGGTCACAAAATCTTGTACAC
* * *
17754882 -TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAATGATCTCGTCTACCAAGT
362 TTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
* * * * * * *
17754946 TTGGGGCCAAAAATCCTTTCGAGAAAATTTTAAAAAATCCCAAACCACAAAAAGTTTCTAAAATC
426 TTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATC
** *
17755011 ATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAGCATTGTA
491 ATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * *** * *
17755076 TGAATTTAAAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCT
556 TGAATTTACAAGCCAT-AAAATAGCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCT
* * * *
17755141 ACCACCCTATCGATCCACGGCTTGCGTATCCCGTCACTCTAGCCGGCGTAGTGCCCGCCCGCCCG
620 ACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTG
* * * * *
17755206 CCCACCGGCTCGTTTCGTCGGTTGGCTTAGGCATACGAAATTCATTCCCAGTCTAAGATCAGATC
685 --C-CC-GATCATTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACC
* * *** * * * * *
17755271 AGACTGAGGGTGGTGGCAGCAAGATTGGCAGCACGCAGAGGGGGACCC-AGTCGATCCTCGGCTT
746 AAACCGAGGGTTACGACAGCAAGATCGACAGCACGCAAAGGGGGACCCGA-TCGATCCCCGGCTT
* * * * * * * *
17755335 GCGCTTCACGCCTCTCTGGCCGGCTGAGTGCCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATA
810 GCACATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATA
* *
17755400 CGGAGTTCATTCCCAGTCTAA
875 CGAAGTTCATTCCCAATCTAA
* * ** * ** *
17755421 GCATACGGAGTTCATTCCTAGTCTGAA-ATAGGACTGGACCGAGGGTTGCGGCAGCGTATGCTAG
1 GCATACGGAGTTCATTCCCAGTCT-AAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGG
*** * **
17755485 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATGGTCGGAGCATCAATGGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAG
* * * ** * ** *
17755550 AACCTGACCGGCAGCAATGGGGTTCCGGTGATCGGGGGGC-CAGGGGGTGTGCGCACATGCTGTG
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT-AGGGGGCTGGGGGGGTGTGCGCACATGATGTG
* * * * *
17755614 CGATGGGTGCTGGTACTTGGCCCTTATATTTGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
194 TGATGGGTGCTGGTACTTGGCCCTTATA-TTGGCCCTTATCGCTCATCAAACCTTGAGAACTCAC
*
17755679 ACCCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
17755744 GGGGACACTTTTTTCAAATGGTCACAAAATTTTGTACACTTCGACTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTG
* * * * ** *
17755809 TTCATGCCAAAAAAAATACAAGGATCGCATCTACCAAGTTTGGGGCTGAAACTCCTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAA
* ** * * * *
17755874 ATTTTAAAAAGTCTTGAACCG-TAAAAGTTTCGAAAATCGTGAAAAATAGAAAATGAGTCATCTT
452 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
* *
17755938 GCCATAAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATAGCA
* * * *
17756003 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGTG
581 TTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * * * *
17756068 CATGCCATCTCTCTGGCCGGCGTAGTGCCCG--C-CC-GCCCGCTCGTTTCATCGATTGGCTTAG
646 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTAG
* * ** * **
17756129 GCATACGGAA-TTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGTAGCAAGATCGAC
711 GCATAC-GAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGAC
* * * * *
17756193 AGCACGCAGAGTGGGCCCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC-G-T-----
775 AGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCG
*
17756251 ---G---G---G--T--T--G---ACTTAGGCATAC-AGAGTTCATTCCCAGTCTAA
840 CCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGA-AGTTCATTCCCAATCTAA
* * ** ** * * * * **
17756289 G-AT-CGGA--CCGA-ACTGAGGGT-TG-T-GG--TAG-CAC-ATGCTTGGCTCGG--GCATGTG
1 GCATACGGAGTTC-ATTCCCAGTCTAAGATCGGACCAGAC-CGAGGGTT-G-T-GGCAGCACATG
** * * * ****** * * * * * * *
17756340 CTGGTGC-C-GTAATTTTCT--TCACCG-GGGCACCATCG-C-CGG-AGCATCGCGGGAGAACCT
61 CTGG-GCTCGGGCATGTGCTGGT-GCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATC-
* * * * ** ** * * ** * * ****
17756397 GACCTGCG-GCATTGGGGTTCCCGCGATCGGGG--GGGCCG---GGGGGATGTGCGCACATGATG
123 GA-CAGAGAAC-CT-GACTGGCGGC-ATTGGGGTTCCGACGATAGGGGGCTG-G-GGGGGTG-TG
* * * * ** ** ** * * *
17756456 TGC-GATG-GGTGCTGGTACGTGGCCCTTATA-TTGGCCC-CCTA-T--CCCTCATCAAAC-CTT
181 CGCACATGATGTG-T-G-ATG-GGTGCTGGTACTTGGCCCTTATATTGGCCCTTATC--GCTCAT
* * * * * **** * *
17756513 GAGAA-C-TCATATC-CCCTTAA------AGAGCATTTGAGATTTTACAGGTTTACTGCTAGTAG
240 CA-AACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
* *
17756569 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCGAATGGTCACAAAATCTTGTACACTTCGAAT
304 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
* * * *
17756634 TTTT-GACTGAATTTTTTTGTGCATGCCAAAAAAAAAAAAAAACAGGGATCAAGTCTACCAAGTT
369 TTTTAG-CTGAA-TTTTTTGTGCATGCC-----AACAAAAATACAAGGATCACGTCTACCAAGTT
* * * * * * * ** *
17756698 TTGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTGAATCGTAAAAGGTTTTGAAAATCG
427 TGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCA
* * * *
17756763 TGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAATGCTTGAGGGACCATTGTAT
492 TGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* * * * * *
17756828 GAATTTACAAGCCATAAAAATGGCATTGGAAAGCAGAAATATGAAGATGTGCCTAAACCCACCAA
557 GAATTTACAAGCCAT-AAAATAGCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTA
* * *
17756893 CCACCCTATCGATCCACGGCTTACGCATCCCGTCTCTTTGGCCGGCGTAGTGCCCGCCCACCTGC
621 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGC
* * * **
17756958 CTGCATGCTCATTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCAAGTCTAAGATCAGACTG
686 C--C--GATCATTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCA
* * * *
17757023 AACTGAGGGTT-CTGGCAATAGGGTTGCGGTAGCAAGATCGGCAGCACGC-AGGGTGGGCCCCGA
747 AACCGAGGGTTAC--G----A------C---AGCAAGATCGACAGCACGCAAAGG-GGGACCCGA
* *
17757086 TCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCC-G-T--------G---G---G--T--T--G
796 TCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGG
* *
17757129 ---ACTTAGGCATACGGAGTTCATTCCCAGTCTAA
861 TTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * *
17757161 G-AT-C-G-G---------A---T-----C-G---A-ACTGAGGGTTGTGGTAGCACATGCTTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * ** * *
17757200 CTCGGGCATGTGCTGGTGCCGCAATTTTCTTCACCGGGGCACCATCGCCGGAGCATCG-CGGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGAC-AGAG
** * * * *
17757264 AACCTGACCAGTGGCATTGGGGTTCCGATGATCGGGGGGCCCGGGGGGGGATGTGCGCACATGAT
130 AACCTGACTGGCGGCATTGGGGTTCCGACGAT-AGGGGG--CTGGGGGGG-TGTGCGCACATGAT
* * * * * *
17757329 GTGAGATGGGTGCTGGTAGTTGGCCCTTATATTGTCCCCCTATCCCTCATCAAACCTTAAGAACT
191 GTGTGATGGGTGCTGGTACTTGGCCCTTATATTG-GCCCTTATCGCTCATCAAACCTTGAGAACT
* * * * *
17757394 CACACCCCCTTAAAGTGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTTAAGTATCTAA
255 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * * * *
17757459 AATGGGGTCATTTTTTTCAAATGGTCACAGAATCTTGTACACTTCGATTTTTTAGCTAAAGTTTT
320 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTT
* * * * **
17757524 TTGTGCACGCCAAAAAAAATAAAAGGATCACGTCTACTAAGTTTGGGGCCAAAACTCCTTCTGAA
384 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
** * * ** * * * *
17757589 AAAATTTTAAAAAATCCAAAACCGGAAAATGTTTTGAAAATCGTGAAAAAAAGAAAACGAGTTGT
449 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGT
* * * *
17757654 CTTGCCTTGAAACTTCATGTGAGGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATA
* * * * *
17757719 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGTTT
578 GCATTGGCATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * ** * * *
17757784 GTGCATCCCGTCCCTCTGGCCGACGTAGTGATCGCCCGCC--CAC--TCGTTTCGTCGATTGGCT
643 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCT
* * * * * ** *
17757845 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATC-
708 TAGGCATACGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCG
* * * ** * * *
17757909 AGCAGCACGCAGAGGGGTACCCGACCGATCCCCGATTTGCGCATCCCACCCCTCTGGCCGGTTGA
773 A-CAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGA
* * * * * * *
17757974 GCGCCCGCACGCTAGTTCCGTGAGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
837 GCGCCCGCACGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
* * * * * *
17758033 GCATACGTAGTTTATTCCCAGTCGAAGATTGGACCAGACCGAGGGTTGTGGCAGTAGATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
* * * * * *
17758098 CTAGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGCCGGAGCATC-ATCGGAG
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGA-CAGAG
*
17758162 AACCTGACCGGCGGCATTGGGGT
130 AACCTGACTGGCGGCATTGGGGT
17758185 ACCGGCGGCA
Statistics
Matches: 29970, Mismatches: 5135, Indels: 3832
0.77 0.13 0.10
Matches are distributed among these distances:
840 25 0.00
841 1 0.00
842 1 0.00
843 2 0.00
844 121 0.00
845 3 0.00
846 2 0.00
847 58 0.00
848 9 0.00
849 757 0.03
850 208 0.01
851 118 0.00
852 173 0.01
853 445 0.01
854 182 0.01
855 297 0.01
856 38 0.00
857 120 0.00
858 80 0.00
859 54 0.00
860 153 0.01
861 457 0.02
862 30 0.00
863 43 0.00
864 94 0.00
865 84 0.00
866 145 0.00
867 187 0.01
868 666 0.02
869 412 0.01
870 32 0.00
871 561 0.02
872 325 0.01
873 268 0.01
874 377 0.01
875 62 0.00
876 441 0.01
877 562 0.02
878 452 0.02
879 261 0.01
880 220 0.01
881 603 0.02
882 182 0.01
883 22 0.00
884 414 0.01
885 369 0.01
886 314 0.01
887 60 0.00
888 507 0.02
889 678 0.02
890 376 0.01
891 460 0.02
892 622 0.02
893 729 0.02
894 1081 0.04
895 192 0.01
896 608 0.02
897 1120 0.04
898 1096 0.04
899 566 0.02
900 1182 0.04
901 1279 0.04
902 1435 0.05
903 1377 0.05
904 464 0.02
905 479 0.02
906 585 0.02
907 74 0.00
908 20 0.00
909 55 0.00
910 16 0.00
911 15 0.00
912 130 0.00
913 75 0.00
914 290 0.01
915 186 0.01
916 68 0.00
917 82 0.00
918 33 0.00
919 33 0.00
920 46 0.00
921 53 0.00
922 18 0.00
923 590 0.02
924 12 0.00
925 19 0.00
926 39 0.00
927 221 0.01
928 39 0.00
929 29 0.00
930 6 0.00
931 28 0.00
932 19 0.00
933 30 0.00
934 20 0.00
935 23 0.00
936 19 0.00
937 11 0.00
938 12 0.00
939 14 0.00
940 11 0.00
941 19 0.00
942 7 0.00
943 15 0.00
944 21 0.00
945 25 0.00
946 12 0.00
947 12 0.00
948 12 0.00
949 23 0.00
950 16 0.00
951 14 0.00
952 3 0.00
953 2 0.00
954 40 0.00
955 19 0.00
956 28 0.00
957 36 0.00
958 19 0.00
959 17 0.00
960 20 0.00
961 25 0.00
962 9 0.00
963 39 0.00
964 45 0.00
965 34 0.00
966 37 0.00
967 53 0.00
968 16 0.00
969 21 0.00
970 24 0.00
971 15 0.00
972 25 0.00
973 10 0.00
974 28 0.00
975 15 0.00
976 27 0.00
977 25 0.00
978 6 0.00
979 20 0.00
980 25 0.00
981 14 0.00
982 13 0.00
983 3 0.00
984 9 0.00
985 16 0.00
986 13 0.00
987 13 0.00
988 39 0.00
989 23 0.00
990 30 0.00
991 29 0.00
992 32 0.00
993 10 0.00
994 11 0.00
995 24 0.00
996 25 0.00
997 30 0.00
998 23 0.00
999 5 0.00
1000 13 0.00
1001 4 0.00
1002 12 0.00
1003 10 0.00
1004 19 0.00
1005 27 0.00
1006 10 0.00
1007 3 0.00
1008 6 0.00
1009 7 0.00
1010 7 0.00
1011 18 0.00
1012 22 0.00
1013 19 0.00
1014 19 0.00
1015 23 0.00
1016 24 0.00
1017 19 0.00
1018 23 0.00
1019 25 0.00
1020 22 0.00
1021 20 0.00
1022 19 0.00
1023 28 0.00
1024 279 0.01
1025 348 0.01
1026 309 0.01
1027 486 0.02
1028 319 0.01
1029 520 0.02
1030 322 0.01
1031 338 0.01
1032 415 0.01
1033 298 0.01
1034 201 0.01
1035 262 0.01
1036 237 0.01
1037 197 0.01
1038 218 0.01
1039 279 0.01
1040 284 0.01
1041 202 0.01
1042 276 0.01
1043 247 0.01
1044 207 0.01
1045 253 0.01
1046 244 0.01
1047 211 0.01
1048 350 0.01
1049 124 0.00
1050 112 0.00
1051 130 0.00
1052 229 0.01
1053 101 0.00
1054 108 0.00
1055 414 0.01
1056 118 0.00
1057 97 0.00
1058 86 0.00
1059 171 0.01
1060 255 0.01
1061 159 0.01
1062 102 0.00
1063 71 0.00
1064 76 0.00
1065 69 0.00
1066 67 0.00
1067 83 0.00
1068 113 0.00
1069 67 0.00
1070 32 0.00
1071 50 0.00
1072 251 0.01
1073 25 0.00
1074 38 0.00
1075 33 0.00
1076 15 0.00
1077 115 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (895 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGACAGAGA
ACCTGACTGGCGGCATTGGGGTTCCGACGATAGGGGGCTGGGGGGGTGTGCGCACATGATGTGTG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTTATCGCTCATCAAACCTTGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTGTGCA
TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTT
TAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAATAGCATTGGC
ATGTAGAAATATGAAGATGCGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
CGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCTGCCCGATCATTTCGTCGGTTGGCTTAGGCATA
CGAAGTTCATTCCTAGTCTAAGATCAGACCAAACCGAGGGTTACGACAGCAAGATCGACAGCACG
CAAAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
CGCTCGTTTCATGGGTTAACTTAGGCATACGAAGTTCATTCCCAATCTAA
Found at i:17722822 original size:26 final size:26
Alignment explanation
Indices: 17722785--17722836 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17722775 GTTGGCTTAG
*
17722785 GCATACGGAGTTC-TTTCCTAGTCTAA
1 GCATACGAAGTTCATTTCC-AGTCTAA
17722811 GCATACGAAGTTCATTTCCAGTCTAA
1 GCATACGAAGTTCATTTCCAGTCTAA
17722837 AATTCGACCG
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 19 0.79
27 5 0.21
ACGTcount: A:0.27, C:0.23, G:0.17, T:0.33
Consensus pattern (26 bp):
GCATACGAAGTTCATTTCCAGTCTAA
Found at i:17723127 original size:26 final size:27
Alignment explanation
Indices: 17723092--17723148 Score: 80
Period size: 26 Copynumber: 2.1 Consensus size: 27
17723082 CGTGGGTTGA
* * *
17723092 CTAAGGCATACGGAGTTTATTCCCAGT
1 CTAAGGCATACGGACTTCATTCCAAGT
17723119 CTAA-GCATACGGACTTCATTCCAAGT
1 CTAAGGCATACGGACTTCATTCCAAGT
17723145 CTAA
1 CTAA
17723149 AATCAGACCG
Statistics
Matches: 27, Mismatches: 3, Indels: 1
0.87 0.10 0.03
Matches are distributed among these distances:
26 23 0.85
27 4 0.15
ACGTcount: A:0.30, C:0.25, G:0.18, T:0.28
Consensus pattern (27 bp):
CTAAGGCATACGGACTTCATTCCAAGT
Found at i:17724029 original size:26 final size:26
Alignment explanation
Indices: 17723999--17724051 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17723989 GTTGGCTTAG
17723999 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
17724025 GCATACGGTGTTCATTCCCAGTTTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17724051 G
1 G
17724052 ATCAAATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.25, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17726679 original size:26 final size:26
Alignment explanation
Indices: 17726640--17726692 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17726630 GTTGACTTAG
*
17726640 GCATATGGAATTCATTCCCACTCTAA
1 GCATACGGAATTCATTCCCACTCTAA
* *
17726666 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCACTCTAA
17726692 G
1 G
17726693 ATGAGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.26, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGGAATTCATTCCCACTCTAA
Found at i:17727103 original size:903 final size:902
Alignment explanation
Indices: 17725023--17758299 Score: 31014
Period size: 903 Copynumber: 37.1 Consensus size: 902
17725013 GGCACCATCA
*
17725023 CGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
*
17725088 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTGT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* * *
17725153 ACAGGTTTGCTGCCAATAGCCGTTAAAGTGTCTGAAATGGGGACACTTTTTTTAAATGGAT-ACA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG-TCACA
* * * * *
17725217 AAATCTTGTACACTTCGAGTTTTTAGGTGAATTTTTTTATTCATGCCAAAAAAAATGCAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * * * *
17725282 ACTTTTACCAAGTTTAGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCTTGAACCCTCAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* * *
17725347 AGTTTCAAGAATCATGAAAAATAGAAAACAAGTCGTCTTGCCGTGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* *
17725412 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAGTGGCACGTAGAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * *
17725477 CCTAAACCCACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGAAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* *
17725542 GCCCGCCCG--C-CT-----GCTCGTTTCGTCAGTTGGCTTAGCCATACGGAGTTCATTCCCAGT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * * * *
17725599 CTAAGATCAGACCAGACTGAGGGTTTCAGCAACAGGATCGGCAGCATGCAGAGGGAGACCCGATC
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * ** * * * *
17725664 GATCCCCATG-TTGCGCATCCCCCCCCCTTTGGCCAACTGAGTGACCGCACGCTCATTTTGTGGG
649 GATCCCC-GGCTTGCGCAT-CCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* * * * *
17725728 TTGACTTAGGCATATGGAATTCATTCCCACTCTAAGCAGACGAAGTTCATTCCCAGTCTAAGATG
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-
* * * * * * *
17725793 GGACCGGACCGAGGGTTGTGGCAACACATGCTGGGTTCGGGCATGTGCTAGTGCTGTATTTTTCT
776 GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
* * *
17725858 TCG-CTGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCAGCAGCATTGGGGTTCTGG
841 TCGTC-GGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
*
17725920 CGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGTTGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * * *
17725985 ATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCGCACCCCCTTAAAGAGCATTTGAGATTGT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
*
17726050 ACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGAT-ACA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG-TCACA
* * *
17726114 AAATCTTGTACACTTCGAGTTTGTAGCTGAA-TTTTTTATGCATGCCAACAAAAATGCAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * *
17726178 ACTTTTACCAAGTTTAGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTAAACCGTAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* * * * * *
17726243 AGTTTCGAAAATCGTGAAAAATAAAAAATGAGTCGTCTTGCCATGAAATTTCAGGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * * *
17726308 AGGGACCATTGTGTGAATTTACAAGCCTTAAAAATGGCAGTGGCACGTAGAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * * * * *
17726373 CCTAAACCCACCTACCACCTTATCAATCCACGGCTTGCGTATCCCGTCTCTCTAGCCAGCGAAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
*
17726438 GCCCGCCCGCCCGCTCGCCCGCTTC-TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAG
519 GCCCGCCCGCCCGCTCGCCCGC-TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
* * * * *
17726502 TCTAAGATCAAACCAGACTGAGGGTTGCGGCAGTAGGATCGGCAGCACGTAGAAGGGGACCCGAT
583 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
** * * * * *
17726567 CGATCCCCATCTTGTGCATCCCGCCCCTTTGGCCGGCTGAGTC-ACCGCACGCTCATTTTGTGGG
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG-CGCCCGCACGCTCGTTTCGTGGG
* * *
17726631 TTGACTTAGGCATATGGAATTCATTCCCACTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATG
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATG
* * * *
17726696 AGACCAGACCGAGAGTTGTGGCAGCACATGCTGGGTTCGGGCATGTGCTGGTGCTGCATTTTTCT
777 -GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
* * * * * *
17726761 TCGCCGGGGCACCACCACCAGAGCATCGTCAGAGAACCTGATCGGCGGTATTGGGGTTCCGG
841 TCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
17726823 CGATCGGGAGGGCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
17726888 TTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* *
17726953 CAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGAGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* *
17727018 ATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTGTGCATACCAA-AAACAATACAAGGATCA
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAA-AATACAAGGATCA
17727082 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT-CTCGAACCGTAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAAA
* * *
17727146 AGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTAAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * *
17727211 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGTATTGGCATGCAGAGATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* *
17727276 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTATCTTTGGCCGGCGTAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * *
17727341 ACCCGCCCG--C-C-CACCCGCTCGTTTTC-TCAGTTGGCTTAGGCATACGGAGTTCATTCCTAG
519 GCCCGCCCGCCCGCTCGCCCGCTCG-TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
** * * * * *
17727401 TCTAAGATTGGATCAAACTGAGGGTTGCGATC-GCAGGATTGGCAGCACGCAGAAGGGG-CCCTG
583 TCTAAGATCAGACCAGACTGAGGGTTGCG-GCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-G
** * * * * * *
17727464 GTCGATCCCCGGCTTGTGCATCTCGCCCCTCTGGCCGGCTGAGCGCCCGTATGCTCATTTCATGG
646 ACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* ***
17727529 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-CGGACCAGATCGAGGGTT-GTGGT
711 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGG---AGTTC-A---TTCCCAGT
* ** * *** * * ** * ** *
17727591 AGC-AAGATTGGCAGCACGCAAAGGGGGACCCGGCCAATCCCCGGCTTGCGCATCCCGCCCCTCT
769 --CTAAGA-TGG-ACCA-G-ACCGAGGGTTGCGG-C-AGCACATGC-TGGGC-T--CG-GGC-AT
* * *** *
17727655 GGCCGACTGAGCGCCCGCA-CGCTCGTTTCGT-GGGTTGACTTAGGCAT-A-CGGAGTTCATTCC
820 -G-TG-CTG-GTG-CCGCATTTTTC--TTCGTCGGG--G-C--A-CCATCACCGGAG--CA-T--
* * * * * *** *
17727716 CAGTC-TA-AGCAT-A-CGGAGTTCATTCCCAG-TCC-A
867 C-GTCGGAGAACCTGACCGGCG-GCATT-GGGGTTCCGG
* *** ** * * * * * * *
17727749 AGATCGGACCGGATGGAGGGT-TACGGCAGCACATGCTGGGC-TTAGGCTGTGTTGGTGC--CGC
1 CGATCGGGGGGGCCGGGGGGTGT---GC-GCACATGATGTGCGAT-GG--GTGCTGGTACTTGGC
** * * * * * * **
17727810 ATTTTTCTTCGTCGGGGCACC-ATCGCC-GA--AGAACCTGACCGACGGCATTGGGCTTTCA-CC
59 CCTTAT-AT--T--GGCCCCCTATC-CCTCATCA-AACCT---CGA--G-A----ACTCACACCC
** ** * **** * * ** * * * *** ** * *
17727870 GATCGAGGAGCGGGGGGGGTGTGCGCACATGATGTGTGATG--GGT-GCTGGT-ACTTGGCCCTT
107 CCTTAAAGAGCATTTGAGAT-T--TTACA-G--GTTTGCTGCCAGTAGCCATTAAAGT-G-TCTG
* * ** * ** * **** ** * * *
17727931 ATATTGGCCCCCTATCCCTCATCAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
164 AAATGGGGACACT-T---TTTTCAA-AT-G-G---TCACAAAATCTTGTACA-C-TTCGAGTTTT
* ** * * ** ** * * * ** *
17727996 TA-C--AAGTTTGCTG-CCAGTAGGCATTAAAGTGTTTAAAATGGGGA-CACTTTTGTCAA--AT
217 TAGCTGAATTTTTTTGTGCA-T-GCCAACAAA---AATACAA---GGATCACGTCTACCAAGTTT
* **
17728054 -GGTCACAAAATCTTGTACACTT-CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAAT
274 GGGGC-CAAAA-C---T-C-CTTCCGA------A----AA---AATT-T---T-----AAAAAAT
** ** ** * * ** *
17728117 ACAAGAATCACGCCTACCAAGCTCGGGGCCAAAAATCCTTCCAAAAAAATTTTAAAA--ATTC-T
310 -CCTGAA-C-CG--TAAAAAG-T----TTCAAAAAT-CAT---GAAAAA-TAGAAAACGAGTCGT
*** * * * *** ** * * * * *
17728179 CAAACCGCA-AAAAGTTTCAAAAATCATGAA-AAAT-AGAAAACGAGTCGTCTTGCCA-TGA-AA
360 C-TTGC-CATGAAA-CTTC----A-CGTGAAGGCTTAAG-GGACCA-TTGT-ATG-AATTTACAA
* ** * *** * *** ** * *
17728239 -CTTCACACGAA-GGC-TTAAGGGAC-CA-TTGTATGAATTTACAAGCCATAAAAATGGCA-TTG
413 GC--CATAAAAATGGCATT--GGCACGCAGAAATATGAA--GATGTGCC-T--AAA-CCCACCTA
* * ** *** ** * ** * * * * ** *
17728298 GCATGCAGAAATATGAAGTTGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA-
468 CCA-CCCTATCGATCCA--CG-G-CT-TGCGCA--T--C-CCGTCTC--T-C-TGGCCGGCGTAG
* * * ** * * **
17728362 T-CCCGTCTCTCTGGCCGGCGTAGTGTCTGCCCGCCCACCTGCCCTGCTCGTTTCGTCAGTTGGC
518 TGCCCG-C-C-C--GCC--C---G-CTC-GCCCG--CTCGT-TTC-G-TCGGTT-GGCTT-----
* * ** * * **
17728426 TTAGGCATACAGAGTTTATTCCCAGTCTAAGATTGGACCA-AATCGAGGGTTACAACAGCAGGAT
560 --AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACT-GAGGGTTGCGGCAGCAGGAT
* * * **
17728490 CAGCAACATGTCA-AGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
622 CGGCAGCACG-CAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * *
17728554 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAATCTAAG-AT
686 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
* *
17728618 -C-G-G---A-T--C-G-----GAT----C-GA--GA--GTTGCAGCAGCACATGCTAGGCTCGG
751 ACGGAGTTCATTCCCAGTCTAAGATGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGG
* * ** *** * *
17728659 GCATGTGCTAGTGCCGCATTTTTCTTCGCCAAGGCACCATCGTTGAAGCATC-ACTGGAGAACCT
816 GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTC-GGAGAACCT
* *
17728723 GACCGACGGCATTGGGGTTCCGA
880 GACCGGCGGCATTGGGGTTCCGG
17728746 CGATC-GGGGGG-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
17728809 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
17728874 CAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTAACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * *
17728939 ATCTTCTACACTTCGAGTTTTTAGCTGAATTTTTTTCTGCGTGCCAGA-AAAAAGACAAGGATCA
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA-ACAAAAATACAAGGATCA
* *
17729003 CGTCTACCAAGTTTGGGGCTAAAACTCCTTCCGAAAAAAGTTTAAAAAAT-CTCGAACCGTAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAAA
* * *
17729067 AGTTTCAAAAATCATGAAAAATAGAAAACAAGTCATCTTGCCATTAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * *
17729132 AGGGACCTTTGTATGAATTTTCAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * ** *** *
17729197 CCTAAACCAACCTGCCACCCTATCGATCCACGGCTTGCGCATCATGTCTCTCTGGTATGAGTAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * * * * *
17729262 GCCCACCCGCCTGCCCGCCCGTTCATTTTGTCGGTTGCCTTAGGCATACGGAGTTCATTCCCAGT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* ** * * ** * *
17729327 CTAAGATCAGACCGGACTGAGGGTCACGGTAGCAAGATCGATAGCACGTAGAGGGGG-CCCCACC
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * ** * ** **
17729391 GATCCCTGGCTTGCGCATCCCGCACCTCTGGCCAGCTGAGAACCTGCACGCTTATTTCACGGGTT
649 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
17729456 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A-TC-------G-
714 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGGA
* * * *
17729499 --A-ACCGAGGGTTGCGGCAGCACATACTGGGCTCGGGCATGTGCTGGTGCCGTATTTGTCTTCA
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* ** * ** * *
17729561 CCAAGGCACCATCACCGAAGCATCACCGGA-AACCTGACCGGCGGTATTGGGGTTCCGA
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * * *
17729619 CGATCGGAGGGGTCGGGGGGGTTGTCCGCACATGATTTACGATGGGTGCTGGTACTTGGCCCTTA
1 CGATCGG-GGGGGCCGGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* *
17729684 TATTGGCCCCCTATCCCTTATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATATGAGATTT
64 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* *
17729749 TACAGATTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGCACACTTTTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
*
17729814 AAATCTTGTACACTTCGAG-TTGTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * * *
17729878 ACATCTACCAAGGTTGGGGCCAAAACTCCATCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* * * *
17729943 AGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGTCTCGCCATTAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * * * *
17730008 AGGAACCAATGTATAAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATATG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * * * ** *
17730073 CCTAAACCCACCTGCCACTCTATCAATCCACGGCTTGCGCATCCCATCTCTCTGGCTTGTGTAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * * *
17730138 ----G--C-CACTC-CACCCGCTCGTTTCATCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * ** * * * * *
17730195 CTAAGATCAGACCACACTGAGGGTTACGATAGCAGGATCAGTAACACGCAGAGAGGGACCCGGCC
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * * ** * *
17730260 AATCCTCGGCTTGCGCATCTCACCCCTCTGGCCGTTTGAGCGCCCGGACACTCGTTTCGTGGGTT
649 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
17730325 GACTTAGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---------A-TC--A-A---A
714 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGGA
* * * * *
17730365 CCGGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGAGCATGTGCTGGTGCCACATTTTTCTTCC
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* * * * * * *
17730430 CCAGGGCACCAT--------CA---TCGGAGAACCAGACCGACGACATTGGGATACCGG
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * * * *
17730478 AGATC------G--GGAGGGTGTCCGTACATGATGTGCGATGGGTTCTGGTACTTGGCCTTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
** *
17730535 TTGAACCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
17730600 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * *
17730665 ATCTTGTACACTTTGAGTTTTTAGCTGAA-TTTTTTATGCACGCCAACAAAAATACAAGGATCGC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* * * * *
17730729 ATCTACCAACTTTGGGGCCAAAACTCCTTTCAAAAAAATTTTAAAAAAT-CTCGAACCGGAAAAA
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAAAA
* *
17730793 GATTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * * *
17730858 GGGACCATTGTATGTATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATGTGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* *
17730923 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATCTCGTCTCTCTGGCCGGCGTAGT-
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * *
17730987 ---GCCTG--C-C-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCTTACGGAGTTCATTCCTAGTC
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * **
17731045 TAAGATC-GCACCAGA-TCGAGGGTTGTGGCATCAGGATCGGCAGCACGTAGAGGGGGACCTGGT
585 TAAGATCAG-ACCAGACT-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* * * * *
17731108 CGATCCCCGGCTTACGCATCCCGCCCTTTTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTAGGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
17731173 TGACTTAGGCATACGGAGTTCATTCCCA-T-T---C-TA---AG---------A-TC--AGA---
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGG
* *
17731214 A-CGGACCGAGGGTTGC-GCTAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCGCATTTTTCTT
778 ACCAGACCGAGGGTTGCGGC-AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
* * * *
17731277 CGTCGGGGCACCATCACCGTAGCATCGCCGAAGAACCTGACCGGCGGCATTGGGGTTCCGA
842 CGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
*
17731338 CGAGT-GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCATTAT
1 CGA-TCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * ** *
17731402 ATTGG-CCCCTATCTCTCATCAAACCTCGAGAACTCACAACCGTTTAATGAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
*
17731466 AGAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* * *
17731531 AATCTTGTACACTTCTAGTTTTTAGCTGAATTTTTTTTTGCATGCCAACAAAATTACAAGGATCA
195 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * *
17731596 CGTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAAAAATTTTAAAAAATCTTGAGCCGTAAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
* *
17731661 GTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * * *
17731726 GGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCAATGGCACACAGAAATATGAATATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* * * * *
17731791 TTAAACCCACCTACCACCCTATTGATCCACGGCTTGCGCATCCTGTCTCTCTGGTCGGTGTAGT-
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * * * *
17731855 -------GCCCGTTCGCCCGCTCGTTTCGTCAGTTGGCTTAGGTATATGGAGTTCATTCCCAATC
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
** * * * * * * * * * * **
17731913 TAAGATTTGATCGGATTGAGGGTTGTGGTAGCAAGATCGCCACCACACAGTGGACGACCCGACCG
585 TAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCG
*
17731978 ATCCCCGGCTTGCG-A----------AT---C--C----CG--C-C-C-CTC---TCGTGGGTTG
650 ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
* *
17732015 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCGTACGGAGTTCATTGCCAGTCTAAGATTGGA
715 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA-TGGA
* * * * ** * *
17732080 CCGGAACGAGGGTTGCGGCAGCACATGCTAGGCTCGGGCATGTGCTGGAGATGCATTTTTTTTCA
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* * * * ** *
17732145 TCGGGGCACCATCGCCAGAGCATCATCGGAGAACCTGGCCGATGGCATTGGGGTTCCAG
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
17732204 CGATTGGGGGGGCCGGAGGGGCGTGCGCAC---A--T--GATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCCGG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* *
17732262 CTTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCATACCCCCTTAAAGAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
*
17732327 ACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* * * * * *
17732392 AATCTTGTACACTTCAAGTTTTTAGATGAATTTTTTTTTGCAAGCCAAAAAAAATACAAGGATCT
195 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * * *
17732457 TGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCATAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
* **
17732522 CTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * * *
17732587 -GGACCATTGTATGAATTTACAGGCCACAAAATTGGCATTGGCACGTAGAAATATGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* * *
17732651 CTAAACCCACCTACCATCACTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAAT
455 CTAAACCCACCTACCA-CCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * *
17732716 ----GCCCGCCCGCTCGCCCGCTCGTTTCATCGGTTAGCTTAGGCATACGAAGTTGATTCCCAGT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * *
17732777 CTAAGATCGGGCCAGAC-CAAGGTTGCGGTAGCAGGATCGGCAGCATGCAGAGGGGGACCCAACC
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * ***
17732841 GATCCTCGGCTTGGGCATCCCACCCCTCTGGCTAACTGAGCGCCCGCACGCTCGTTTCGTGGGTT
649 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
* * *
17732906 GACTTAGGCATACGGAGTTTATTCCCAGTCTAAGCATACGGAGTTCATTGCCAGTCTAAGATCAG
714 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-GG
* * ** * * **
17732971 ATCGGATAGAGGGTTGCGGCAGCACATGCTAGGCTCAGGCATGTGCTGGTGATGCATTTTTCTTC
778 ACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
** **
17733036 G-CTGGGGCACCATTGCCGGAGCATCACCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
843 GTC-GGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * *
17733096 CCATCGGGGGGGCCGGGGGGTGTGCGCACAAGATGTGCGATGGGTGCTGGTACTTGGCCATTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
** *
17733161 TTGGCCCCCTATCCCTCATCAAAAATTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
17733226 CAAGTTTGCTTCCAGTAGCCATTAAAGTTTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
17733291 ATCTTGTACACTAT-GAGTTTTTAGCTGAATGTTTTTT-TCCATGCCAAAAAAAAAACAAGGATC
196 ATCTTGTACACT-TCGAGTTTTTAGCTGAAT-TTTTTTGTGCATGCCAACAAAAATACAAGGATC
* *
17733354 ACGTCTACCAAGTTTGGGGCCGAAACTCCTTCCGAAAAAATTTTAAAAAAT-CTCGAACCGCAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAA
*** * * *
17733418 AAGTTTCAAAAATCATGAAAAATAGAAATTAAGTCGTCTTGCCATGAAACTTCTCATCAAGGCTT
323 AAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
* *
17733483 AAGGGACCATTGTACGAATTTACAAGCCATAAAAATGGCATTAGCACGCAGAAATATGAAGATGT
388 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
* **
17733548 GCCTAAACCCACCTACCACCCTATCGATCTACGGCTTGCGCATCCCGTCTCTCTGGCCAACGTAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* **
17733613 TGCCCGCCCGCCCGCCCTACCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
518 TGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
** * ** * * * ** * * **
17733678 TCTAAGATTGGACCGGACCAAGGGTTACGGCGGTAGGATTAGCAGCACGCAAAAGGGGACCCGGT
583 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* * * * * *
17733743 CGATCCTCGGCTTGCGCATCTCGCCCCTCTGGCCGACTGAGTGCCCGCACACTCATTTCGTGGGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
* * *
17733808 TGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGTATACGGAGTTCATTCCCAGTCTAAGATCA
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-G
* * * *
17733873 GACCAAACCGAGGGTTACGACAGCACATGTTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
777 GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
* ** ** * * *
17733938 CGCCGGGGCACCATCACCATAGCATCACCGGAGAACCTGATCGACGAG-ATTTGGGTTCCGG
842 CGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCG-GCATTGGGGTTCCGG
* ** * ** *
17733999 CGATCGGAGGGGCCGAGGGAGGGTGTGCGCACATGATGTATGACGGGTATTGGTACTTGGCCATT
1 CGATCGGGGGGGCC--GGG-GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* ** * **
17734064 ATATTGGCCCCCTATCCCTCATAAAAAATC-AAAACTGGCACCCCCTTAAAGAGCATTTGAGATT
63 ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
* * * *
17734128 TTACAGGTTTGCTTCCAGTAGCCATTAAAGTTTCTGAAGTGGGGTCACTTTTTTCAAATGGTCAC
128 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
* * * * *
17734193 AAAATCTTATACACTCCTAGTTTTTAGCTGAATTTTTTTGTCCATGCCAAAAAAAAATACAAGGA
193 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AACAAAAATACAAGGA
* * * * *
17734258 TCATGTCTACCAAGTTTGGGGCCAAAACTACATCTGAAATAATTTTAAAAAATCCTGAACCGTAA
257 TCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAA
*
17734323 AAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACATCACGTGAAGGCT
322 AAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
* * *
17734388 TAAGGGACCATTGTATGAATTTACAAGGCTTAAAAATGGCATTGGCACTCAGAAATATGAAGATG
387 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATG
* * *
17734453 TGCCTAAACCCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGCA
452 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
**
17734518 GTGCCCAACCG--C-C-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
517 GTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * * ** * * *
17734579 ATCTAACATCGGATC-GAACTGAGGGTTGCGGCAGCAGGATTTGCGGCATGTAGAGGGGGACCCG
582 GTCTAAGATCAGACCAG-ACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* * * * * **
17734643 GCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCGCCCGCACGTTTGTTTCGTTT
646 ACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
** *
17734708 GTTGACTTAGGCATACGGAGTTCATTCTTAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGAT
711 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* ** * * * * * *
17734773 CAGACTGGATCGAAGGTTGTGGCAGCACATACTGGGCTCGGGCATGTGCTGGTGCCACATTTTTT
776 -GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC
* * * *
17734838 TTCGTCGGGGCACCAT---C---G---C--CGAAGAACCTGACCGGTGGTATTGGCGTTCCGG
840 TTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * *
17734890 TGATC-----GG--AGGGGGTGTCCGCACATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
17734948 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* *
17735013 CAGGTTTGCTACCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
17735078 ATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAGAAGGATCCC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* * **
17735143 GTCTACCAAGTTTGGGGCCAAAAATCCTTCCAAAAAAAATTTT-AAAAATCCCAAACCGTAAAAA
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCC-GAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
** * * *
17735207 GTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTACCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * * *
17735272 GGGACCATTTTTTGAATTTACAAGCCATAAAAATGGCATTTGCATGCAGAAATATGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
*
17735337 CTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT-
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
*
17735401 ---GCCCG--C-C-CGCCCGCTCGTTTCGTCGGTTGGATTAGGCATACGGAGTTCATTCCCAGTC
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * ** *
17735459 TAAGATCACACCAGACCGAGGGTTGTGGCAGCAGGATCGATAGCACGCAGAGGGGGACCCGACTG
585 TAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCG
* * * * * * *
17735524 ATCCCCAGCTTACGCATGCCGCCCCTCTGGCCGACTGAGCGCTCGCACGCACGTTTTGTGGGTTG
650 ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
* * * *
17735589 ACTTAGGCATACGGAGTTCATTCCCAGTGTAAGGATATGGAGTTCATTCCCAATCTAAGATCGGA
715 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-GGA
* * * *
17735654 CCGGACCGAGGGTTGCGACAGCACATGCTGGGCTCGGGCAAGTGCTGGTGCCACATTTTTCTTCG
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* * ***
17735719 TCAGGGCACCAT---C---G---C--CGGAGAACCTGACCGACGGCACAAGGGTTCCGG
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
17735767 CGATCGGGGGTGCCGGGGGGGTGTGCGCACATGATATGCGATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * * *
17735832 ATTGGCCCCCTATCCTTCATCAAACCTTGAGAACTCACACCCCCTTAGAGAGCATTTCAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
*
17735897 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATAGGGACACTTTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* *
17735962 AATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTT-TCCATGCCAACAAAAATACAAGGATCA
195 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * * * *
17736026 CATCTACCAAGTTTGGGGCCAAAACTACTTCCAAAAAAATTTAAAAAAATCTTGAACCGTAAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
* * * *
17736091 GTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACATCACGTGAAGGGTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
** * * *
17736156 GGGACCATTGTATGAATTTACAAGCTGTAAAAATGGCATTCGCATGTAGAAATATGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* * * *
17736221 CTAAACCCACTTACCACCCTATCAATCCACGGCTTGCGCATCCCGCCTCTCTGGCCGGCATAGTG
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * * *
17736286 CCCGCCCGCCCG-T---CTGCTCG-TTCTGTTGGTTGGCTTAGGCATACGGTGTTCATTCCCAAT
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTC-GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * *
17736346 CTAAGATCAGACCAGACTGAGGGTTGTGGCAGCATGATTGGCAGCACGCAGAGGGGGACCCTG-C
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCC-GAC
* * *
17736410 CGATCCCCGGCTTGCGCATCCTGCCCCTCTCGCCGGCTGAGCGCCCGCACGCTTGTTTCGTGGGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
* *
17736475 TGACTTAGGCATACGGAGTCCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCG
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-G
** * * *
17736540 GACCAGATTGAGAGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTTTT
777 GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
* * * *
17736605 CGTCGGGGCACCAT---C---G---C--CGGAGAACCTGACCGGTGGTATTGGCGTTCTGG
842 CGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
17736655 TGATC-----GG--AGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* * * *
17736713 TTGGCCCCCTAACCCTCATCAAATCTTGAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
17736778 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTGAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* *
17736843 ATCTTGTACACTGT-GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATAGAAGGATCC
196 ATCTTGTACACT-TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * ** *
17736907 CATCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTTAAAAATCCCAAACCGAAAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
** *
17736972 GTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * * ** * *
17737037 AGGACCATTTTTTGAATTTACAAGCCATAAAAATGGCATTTCCATGCAGAAATATGAAGATGTAC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
*
17737102 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTG
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* *
17737167 CCCGCCCGCCCG-TCCGCCCACGCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
520 CCCGCCCGCCCGCT-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * * *
17737231 CTAAGATCAGACC-GAACTGAGGGTTGCGACAGCAGGATCGGCAGCACACAAAGTGGAACCCGAC
584 CTAAGATCAGACCAG-ACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* * * * *
17737295 CGATCCCCGGCTTGCGCATCCTGCCCTTCTGGCCGGTTGAGCGCCCACACGCTCGTTTCGT-GGC
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
*
17737359 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATTG
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA-TG
* * ** * * ** * *
17737424 AACCGGATTGAGGGTTACGGCAGCACATTCTGGGCTCGGGCATGTGCTGGTGATGAATTTCTCTT
777 GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
* * * * * *
17737489 CGTCGGGGCACCATCGCCAGAGCATTGGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGA
842 CGTCGGGGCACCATCACCGGAGCA-TCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * *
17737551 CGATCGGGGGGGCTGGGGTGTGTACGCACATCATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
17737616 TTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * * * * *
17737681 CAGGTTTGCTTCCAATAGCCAGTAAAGTTTCTGAAATGGGGACACTTTTTTCAAGTGGCCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
*
17737746 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT-TCCATGCCAACAAAAATACAAGGATCAC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* *
17737810 GTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAG
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAG
** *
17737875 TTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTAG-CATGAAACATCACGTGAAGGCTTAA
326 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT-GCCATGAAACTTCACGTGAAGGCTTAA
** * * * *
17737939 GGGACCATTGTATGAATTTACAAGCTGTAAAAATGGCATTGGCATGTAAAAATATGAAGATGTAC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* *
17738004 CTAAACCCACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTG
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * * * *
17738069 CCTGCCCGCCCG-T---CTGCTCGTTTCGTAGGTTGGCTTAGGCATATGGAGTTCATTCCCAATC
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* ** * * * *
17738130 TAAGATCAGACTAGACTGAGGGTTGCAACAGCAAGATCGGTAGCACGCAGAGGGGGACCTGGCCG
585 TAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCG
* * * *
17738195 ATCCCCGACTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTTGTTTCGCGGGTTG
650 ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
** *
17738260 ACTTATTCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTATAAGATCGGA
715 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-GGA
* ** * * *
17738325 CCAGATCGATAGTTGCGGAAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCA
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* ** ** * * * **
17738390 TCGGGGAACCATCGTCGGAGCATCACCGAAGAACTTGACCGGTGGCATTGGCATTCCGG
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * *
17738449 TGAT---------CAGGGGGTGTGCGCACATGATGTGCGATGGGTGCGGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* * *
17738505 TTGGCCCTCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* *
17738570 CAAGTTTGCTGCCAGTAGCCCTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* *
17738635 ATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCCC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* * * * *
17738700 ATCTACCATGTTTGGGGCCAAAACTACTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAG
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAG
** ** *
17738765 TTTTGAAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGTTTAAG
326 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* * * *
17738830 GGACCATTGTTTGAATTTACAAGCCATAAAAATGGAATT-GCACGCAGAATTATGAAGATGTGAC
391 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCC
* * ** * *
17738894 TAAACCCACCTACCACCCTATCGATCCGCGGCTCGCGCATCCCGTCTCTCTCTCTGGCGTAATGC
456 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * * *
17738959 CCGCCCGCCCGC-CTGCCCGCTCGTTTCGTTGGTTGGCTTCGTCATACGGAGTTCATTCCCAGTA
521 CCGCCCGCCCGCTC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * ** * * * ** * * * *
17739023 TAAGACCACACTGGACCGAGGGTTGCAGCAGCAAGATCAACAGCACGTAGAGGGGGACCTGATCT
585 TAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCG
* * * **
17739088 ATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGTCGGCACGCTCGTTTTATGGGTTG
650 ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
* * * * * *
17739153 ACTTAGGCACATGGAGTTCATTCCCAGTCTAAGCATATGTAGTTTATTCCCATTCTAAGATCGGA
715 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-GGA
*
17739218 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTTTTCG
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* * * * *
17739283 GCGGGGCACCAT--------CA-C-T-AGAGAACCTGATCGGCGGCACT-GGGTTTCGG
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
17739330 CGATCGGGGGTGCCGGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * * * *
17739395 ATTGGCTCTCTAACCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* * *
17739460 ACAGGTTTACTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACGTTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* * *
17739525 AATCTTGCACACTGT-GAGTTTTTAGCTGAATTTTTTTGTGCATGCAAAAAAAAATACAAGGATC
195 AATCTTGTACACT-TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * * * * *
17739589 ACGACAACCATGTTTAGGGCCAAAGCTCCTTTCAAAAAAATTTTAAAAAAT-CTCGAACCGCAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAA
* **
17739653 AAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTATCTTGCCATGAAACTTCACGTGAAGGCTT
323 AAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
* * * * * *
17739718 AAGGGTCCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGACACGTAGAAATGTGATGATGT
388 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
* * * *
17739783 GCCTAAACCCACCTACCACTCTATCGATCCACGGCTTGCGCATCCCGTCTTTCTGGCCGACATAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* * *
17739848 TGCCCTCCCGCCCG-TCCGCCCACTCGTTTGGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
518 TGCCCGCCCGCCCGCT-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* * * ** * * *
17739912 GTCTAAGATCGGATCGGA-TGGAGGGTTGTAGCAGCAGTATCGGTAGCACGTAGAGGGGGACCCG
582 GTCTAAGATCAGACCAGACT-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* * * *
17739976 GCTGAACCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCTGCACGCTCGTTTCGTGG
646 ACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
* * * *
17740041 GTTGACTTAAGCATATGGAGTTCATTCCCAATCTAAGCATACAGAGTTCATTCCCAGTCCT-AGA
711 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGT-CTAAGA
** * * * * * *
17740105 TCGGACTGGACCGAGGGTTACGACAGCACATGCTGGGCTCGTGCTTGTGCTGCTGCTGCATTTTT
775 T-GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTT
* ** * * * * * *
17740170 CTTCGCCGGGGCACCATCGTCGGAGCATTGCCGGAGATCCTGACCGGCAGCATTAGGGTTCTGG
839 CTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * *
17740234 TGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGCTGCTAGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
17740299 TTGGCCCCCTATCCATCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
17740364 CAGGTTTGCTGCCAATAGCAATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* ** * *
17740429 ATCTTGTATACTTTAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAACAAAATACAGGGATC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AACA-AAAATACAAGGATC
* * * * * *
17740494 ACGTCTAGCAAGTTTGGGGCCAAAAATCCTTTCAAAAAAATTTTAAAAAATCTTCAACCGTAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* ** *
17740559 ATTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * *
17740624 AGGGACCATTGTATGAATTTACAAGCCAT-AAAATTGCATTGGCACACAGAAATATCAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * * *
17740688 CCTAAACCCACCTACCTCCCTATCGATCCACGGCGT-AG--T---G-C-C-C--GCCTGC-T--T
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * * * * * *
17740739 ----ACCCACCCG-T-------TCGTTTCGTCAGTTAGCTTAGGTATACAGAGTTCATTCGCTGT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
** * * * * * * ** **
17740792 CTAAGATTGGATCAGACTGAGGGTT-CTAGTAGCAGGATTGGTAGCAAGCAGAGGGGGACTTGGT
584 CTAAGATCAGACCAGACTGAGGGTTGC-GGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* * * * * * *
17740856 TGATCACCGGCTTGCGCATCCTGCCCCAT-TGGACGGCTGAGCGCCCGTACGTTCTTTTCGTGGG
648 CGATCCCCGGCTTGCGCATCCCGCCCC-TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* * * * *
17740920 TTGACTTAAGCATGCGAAATTCATTCCCAGTCTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-
* * * * **
17740985 GGACC-GAACCGAGGATTGTGGCAGCACATGCTAGGCTCAGGCATGTGCTGGTGCCATATTTTTC
776 GGACCAG-ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC
* ** * * * *
17741049 TTCATCGGGGCACCATCGTCGGAGCATCG-CAGGAGAACCTGACCGACGGTATTGCGGTTCCGA
840 TTCGTCGGGGCACCATCACCGGAGCATCGTC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * *
17741112 CAATCGAGGGGGCCTGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
** *
17741177 ATTGGCCCCCTATCCCTCATCAAATGTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* *
17741242 ACAAGTTTGCTGCCAGTCGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* *
17741306 AATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTTTGCATGCCAACAAAAATACAAGGATCA
195 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * * **
17741371 TGTCTAACAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCTGAACTTTAAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
* * *
17741436 GTTTCAAAAATTATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACATGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
*
17741501 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* * *
17741566 CTAAACCCACCTACCACCCTATCGATCCACTGCTTGCGCATCTCGTCTCTCTGGCCAGCGTAGTG
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * ** *
17741631 CCCGCCCGCCCGCCCGCCCACTCGTTTTATCGGTTGGCTTAGGCATACGGAGTTCATTCCCATTC
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * * *
17741696 TAAGATCAGACC-GAATCGAGGGTTGTGGAAGCAGGATCGACAGCACGTAGAGGGGCACCCGATC
585 TAAGATCAGACCAGACT-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * * *
17741760 GATCCTCGGCATGCGCATCCCGCCCCTCTGGCCGACGGAGCGCCCGCATGCTCGTTTCGTGGGTT
649 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
* * *
17741825 GAGTTAGGCATACGGAGTTGATTCCCAGTCTAAGCATACGGAGTTCATTCCTAGTCTAAGACTGG
714 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA-TGG
* * * * * * **
17741890 ACC-GAACTGAGAGTTACGGTAGTAGGATCGACA-GCATGTAGAGGGGGACCCGGTCGAT-CCCT
778 ACCAG-ACCGAGGGTTGC-G--GCA-G--C-ACATGC---T-----GGG-CTCGGGC-ATGTGCT
*** * * * ** *
17741952 GGCTTG-CGCATCTCGCCCCTCTGGCCGATTGAGCACCCGCACGCTCGTTTTGTGGGTTGACTTA
825 GG--TGCCGCAT-T--TTTCT-TCGTCG---GGGCACCATCA--C-C--------GG-AG-C--A
* * ** * ** * * * ** *
17742016 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTC-C
866 -TCGT-CGGAGAACCTGACC-GGC--GGCAT-TGGGGTTC---CGG
* *** * * * * *
17742061 CAATCTAAGATCGGACCGGATCGAGGGTTGCGACAGCACATGCTGGGC-TTGGGCATGTGCTGGT
1 CGATC---GGGGGGGCCGG---G-GGG-TGTG-C-GCACATGATGTGCGAT-GG---GTGCTGGT
*** * ** * * ** * * *
17742125 GCAGCATT-TTTCTTCGT-CGGGGCACC-ATCACCGGAGT--ATCATCGGAGAACCTGAC-CGGT
52 --A-C-TTGGCCCTT-ATATTGGCCCCCTATC-CCTCA-TCAAACCTC-GAGAA-CTCACAC---
** * *** * ** * * ****** * * * **
17742184 GGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTGC-GCACAGGATGTGCGA-T-GGGTG
105 CCCCTTAAAG---AG-C-AT-TTGAGATTTTACAGGTTTGCTGC-CA-G-T-AGCCATTAAAGTG
* * * ** * * **
17742246 -CTGGTACTTGGCCCCCTATTCCTCATCAAACCTCGAGAACTCAC-AACCCTTTAGTGAGCA-TT
160 TCT-GAAATGGGGACACT-TT--T-TTCAAA--T-G-G---TCACAAAATC-TT-GT-A-CACTT
* * ** ** * ** * * *
17742308 TGAGATTTTA-C--AGGTTTGCTG-CCAGTGGCC-ATTAAAATGTCTGAAATGGGGA-CACTTTT
209 CGAGTTTTTAGCTGAATTTTTTTGTGCA-T-GCCAACAAAAAT-AC---AA---GGATCACGTCT
** * * * **** ** *** ***** ** *
17742367 TTCAA--AT-GGTCACAAAA-TCTTGTACACTTCGAGTTTTTAGCTGAAT--TTTTTTGT-GCAT
265 ACCAAGTTTGGGGC-CAAAACTCCT-T-C-CGAAAAAATTTTA-AAAAATCCTGAACCGTAAAAA
*** * * ** ** * * * * * ***
17742425 GCCAACAAAAATACAAGGATCAT-GTCTACCAAGT-TTGTGGCCA--AAACTCCTTTCA-AAAAA
325 G-TTTCAAAAAT-CATGAAAAATAG-AAAACGAGTCGTCTTGCCATGAAA---C-TTCACGTGAA
*** *** ** * ** ** * *
17742485 TTTTTAAAAAATCCCGAACCGTA-GAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCT
383 GGCTTAAGGGA--CC--ATTGTATG-AA-TTT-ACAAGCCAT-AAAAAT-GGCATTG-G-C-AC-
* ** *** ** * * *** **
17742549 TGCCATGAAACTTCACGTGAAGGCTTAAGTGACCATTGTATGAATTTACAAGCCATAAAAATGGG
435 -G-CA-GAAA--T-A--TGAA-G---ATGTG-CC--TAAACCCACCTACCA-CCCTATCGAT-CC
* * *** *** * ** ** * *** *** *
17742614 ATTGGCACATAGAAATATGAAGATGTGC-CTAAACCCACCTACCACCCTATCGATCCACAGCTTG
483 A-CGG--C-TTG-CGCATCCCG-TCT-CTCT-GGCCGGCGTAGTGCCCGCCCG--CC-C-GCTCG
** * * ** * ** * * *
17742678 CGCTTCCCGTTTC-TCTGGCTGGGGTAGTGCCCGCCCACCCACCCGCCCGCTCGTTTCGTCAGTT
536 C-CCGCTCGTTTCGTC-GGTTGGCTTA--G---G--CA--TA--CG-GAGTTC-ATTC--C-C--
* * * *
17742742 GGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCGAGGGTTGGGGTAGCAGG
581 --------------------------AGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGG
** * * * * * * * *
17742807 ATCAACAGCACACAGTTGGGGGACCCGACCGATTCCCGGCTTGTGCATCACACCCTTCTGGCTGG
620 ATCGGCAGCACGCAG-AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGG
* * *
17742872 CTAAGCGCCCCCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATCCCCAGTCTAAG-
684 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * *
17742936 AT--TG-G---------A--CT--G-T-------ACTGAGGGTTACGGCAGCACTTGCTGGGCTC
749 ATACGGAGTTCATTCCCAGTCTAAGATGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
** * ** * * *
17742977 GGGCATGTGCTGGCACCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATTGTCGGAGAGCT
814 GGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACC
* *
17743042 TGACCAGTGGCATTGGGGTTCCGG
879 TGACCGGCGGCATTGGGGTTCCGG
* * *
17743066 CGATC-AGGGGGCCGGGCGGGGTGTGTGCCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
1 CGATCGGGGGGGCC-GG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* * *
17743130 TATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCACTTAAAAAGCATTTGAGATTT
64 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* * *
17743195 TACAGATTTGCTGCCAGCAGCCTTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* *
17743260 AAATCTTGTACACTTCGAGTTTTT-GCTGAATTTTTTTGTGCATTCCAATAAAAATACAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * **
17743324 ACGTCTACCAAGTTTGGGGCTAAAACTCTTTCCGAAAAAATTTTAAAAAAT-CTCGAACCACAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCT-GAACCGTAAA
* * **
17743388 AAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACGAAAAGGCTT
323 AAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
* * * *
17743453 AAGGGACCATTGTATGAATTTGCAACCCATAAAAATGGCATTGACACGTAGAAATATGAAGATGT
388 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
* * *
17743518 ACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGACAGGCGTAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* * * * *
17743583 T---C-CCCGCCTGCCCGCCCACTCGTTTCGTTGGTTGGCTTAGGCATACAGAGTTCATTCCCAG
518 TGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
** * ** * * * *
17743644 TCTAAGATTGGACCGGACCAAGGGTTACGGCAGCAGGATTGGCAGCACGCAAAAGGGGACCCGAC
583 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* * * * * * *
17743709 CGATCCCCAGCTTGCGCATCCCACCCCTCTTGCCTGCTGAGTGCTCGCACGCTCGTTTTGTGGGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
* * * *
17743774 TGCCTTAGGCATACGGAGTTCATTCCCGGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATAA
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-G
* * * **
17743839 GATCAGACCAAGGGTTGTGGCAGCACATGCTGGG-TGCAAGCATGTGCTGGTGCCGCATTTTTCT
777 GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCT-CGGGCATGTGCTGGTGCCGCATTTTTCT
* ** * *
17743903 TCATCGGGGCACCATCGTCGGAGCATCGTCGGAGTACCTGACCGACGGCATTGGGGTTCCGG
841 TCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
*
17743965 CGATCGGGGGGGCCGGGGGAGGTGTGCGCACATGATGTGCGATAGGTGCTGGTACTTGGCCCTTA
1 CGATCGGGGGGGCC-GGGG-GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
*
17744030 TATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
64 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
*
17744095 TACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* * * *
17744160 AATTCTTATACAGTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * *
17744225 ACGTCTAACAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTTAATCGCAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* * *
17744290 AATTTCAAAAATCGTGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * * * *
17744355 AGGGACCATTGTAAGAATTTAGAACCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * * * * * *
17744420 CCTAAATCCACCTACCACCCTATCGATCCACGGCTTGTGCGTCCCGTCTCTCTGGCTGACATAAT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * *
17744485 ----G-CC-CAC-C-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACCGAGTTCATTCCCATT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * * * *
17744542 CTAAGATCGGATC-GAACCGAGGGTTGCGGTAGTAGGATCGGCAGCACGTAGAGGGGGATCAGGC
584 CTAAGATCAGACCAG-ACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* ** * * * * * *
17744606 AGATCCTTGGCTTACGCATCCCGCCCCTCTGGCCGACTGAGTGACCGCACGCCCGTTTTGTGGGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
17744671 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAATTCATTACCAGTCTAAGCATA
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-G------------G----AG--T-
* * * * ** *
17744736 CGAAGTCAATTCCCAGTCTAAGATCAGACCAAACCGAGGGTTACGGTAGCACATAATGGGCTTGG
758 -----TC-ATTCCCAGTCTAAGAT-GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGG
* ** * * * * *
17744801 GCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCATCGCCAGAGCATCGCCAGAGAGCCTG
816 GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTG
* *
17744866 ATCGGCGGCATTGGGGTTCCGA
881 ACCGGCGGCATTGGGGTTCCGG
* *
17744888 CGATCGTGGGGGCCGGGCGGGGTGTGCGCCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
1 CGATCGGGGGGGCC-GG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* * *
17744953 TATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTAATACCCCCTTAAAGAGCATTTGAGATTT
64 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* ** *
17745018 TATAGGTTTGCTGCCAACAGCCTTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* * *
17745083 AAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATAGAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * * * *
17745148 ACATCTACCAAGTTTGGGTCCAAAACT-CTTTCTAAAAAAGTTTTAAAAAATCCCGAGCCATAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTTAAAAAATCCTGAACCGTAAA
* * * *
17745212 AAGTTTCAAAAATCATGAAAAATAGAGAACGAGTCGTCTTGCCATGAAACTTTACTTGAAGGCCT
323 AAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
* * * *
17745277 AAGGGACCATTGTATGAATTTAGAAGCTATAAAAATGGCTTTGGCACGTAGAAATATGAAGATGT
388 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
17745342 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* * *
17745407 TGCCTGCCCTCCCG---G-CCGCTCGTTTCGTCGGTTGG-TTGAGGCATACGGAGTTCATTCCTA
518 TGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTT-AGGCATACGGAGTTCATTCCCA
* * * * * * *
17745467 GTCTAAGATCAGACCGGAATGAGGGTTGCGGTAACGGGATCGGTAGCACGCAGAGGGGGACCCGG
582 GTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA
* * * * * * * *
17745532 CCGATCCCCAGCTTGCGCATCCTGCCCCTTTGGTCGGTTGAGCACCCGCACGCTCGTCTCATGGG
647 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* * * * * *
17745597 TTGACTTATGCATACGGAGTTCACTCCTAGTCTAAGCATATGGAGTTCATTACAAGTCTAAGATC
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-
* * * * *
17745662 AGACCAGACCGAGTGTTACGGCAGCACATGCTGGGCTCGGGCATGTACTGGTGCCACATTTTTCT
776 GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
* * * * * ** * * * * *
17745727 TTGCCGAGGCACCATCCCCGGATCATCACCGGAGAACCTGACTGACGGTAAT-GGG-TCTGG
841 TCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * * *
17745787 CGATCGGGGGGGCCGGGGGGTGTTCGCACATTATGTGCAATGGGTGGTGATACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* *
17745852 TTGGCCCCCTATGCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
17745917 CAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
17745982 ATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATGCAAGGATCAC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* * * *
17746047 GTCCACCAAGTTTGGGGCCAAAACACCTTCCAAAAAAAATTTTAAAAAATCCCGAACCGTAAAAA
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCC-GAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
* *
17746112 GTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCCTGCCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * *
17746177 GGGACCATTGTATG-ATTTACAAGCCATAAAAATGGCATTAGCACGAAAAAATATGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
** ** * * *
17746241 CTAAACCCACCTACCACCCTATCGATCCACACCTTGCGTGTCTCGTCTCTCTGGTCGACGTAGTG
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* **
17746306 CCCACCCGCCCG-TCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATAATGAGTTCATTCCCAGT
520 CCCGCCCGCCCGCT-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * *
17746370 CTAAGATCGGATCAAACTGAGGGTTGCGGTAGCAGGATCGGTAGCACGCAGAGGAGGACCCGGCC
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * * * * * * *
17746435 GATCCTCGGCTTGCGCTTCCCGTCCCTCTGGCCGGTTGAGCGACCGCACCCTTGTTTTGTGAGTT
649 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
17746500 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGG
714 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-GG
* *
17746565 ACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTC
778 ACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
** * * * * **
17746630 ACCGGGG------CA-C----CATCGTCGGAGAGCCTGACCAGCAGTATTGGGGTTCCAA
843 GTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
*
17746679 CGATCGGGGGGGCCGGGCGAGGTGTGCGCCCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
1 CGATCGGGGGGGCCGGG-G-GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* *
17746744 TATTGGCCCCCTATCCCACATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTCAGATTT
64 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
17746809 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* *
17746874 AAATCTTGTACACTTCGAGTTTTTAGCTGCATTTTTTTGTGGATGCC-ACAAAAAATACAAGGAT
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC-AAAAATACAAGGAT
* * *
17746938 CACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACTGTAAA
258 CACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAA
** * * * *
17747003 AAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTGGCCATGAAACTTCACCTAAAGGCCT
323 AAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
** **
17747068 AAGGGACCATTGTATGAATTTACAAGTTATAAAAATGGCATTGGCACATAGAAATATGAAGATGT
388 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
* * * *
17747133 GCCTAAACCCACCTACCACTCTATCGATCCACGGGTTACGCATCCCGTCTCTGTGGCCGGCGTAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* *
17747198 TGCTCGCCCGCCCGCTCGCCTACCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
518 TGCCCGCCCGCCCGCTCG----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
** ** * *
17747263 CCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGTAGCAAGATCGGCAGCACGCAGAGGGGGACC
579 CCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACC
* * ** * * * * * *
17747328 TGGCTAATCCCCTGCTTGCGCATCCCACCCCTTTGGCCGACTGAGCGCCCGAACTCTCGTTTCGT
644 CGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGT
* *
17747393 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCTAGTCTAAG
709 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
*** ** * *
17747458 ATCGGATGGGACCGAGGGTTATGGCTGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTT
774 AT-GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTT
* ** * *
17747523 TCTTCGTTGGGGCACCATCGTCGGAGCATCGTCAGAGAACCTGACCGGCAGCATTGGGGTTCCGG
838 TCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* *
17747588 CGATCGAGGGGGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* * * *
17747653 TTGGCTCCCTTTGCCTCA-CAAACCTCGAGAACTCTCACCCCCTTAAAGAGCATTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
17747717 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGGAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
17747782 ATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCTC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* *
17747847 GTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAAGTTAAAAAAATCCTGAACCGTAAAAAG
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAG
*
17747911 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCGTGCCATGAAACTTCACGTGAAGGCTTAAG
326 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* *
17747976 GGACCATTGTATGAATTTACAAGCCATAAAAATGCCATTGGCACGCAGAAATATGAAGATGTACC
391 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCC
* * * *
17748041 TAAACCCACCAACCACCC-ATTGATCCACGGCTTGCGCATCCCGTCTCTTTGGTCGGCGTAGTGC
456 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * * *
17748105 CCGCCTGCCCGCCCGCTCGCTCGTTTCTTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
521 CCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * * * *
17748170 AAGATCATACC-GAACAGAGGGTTGTGGCAGCAGGATAGGCAACATGCAGAGGGGGATCCGATCG
586 AAGATCAGACCAG-ACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCG
* * * ** ** * *
17748234 ATTCTCGGGTTGCGCATCTTGCCCCTCTAACCTGCTGAACGCCCGCACGCTCGTTTCGTGGGTTG
650 ATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG
* * *
17748299 ACTTAGGCATACGGAGTTCATT-CCATGTCTAAGCTTACAGAGTTCATTCTCAGTCTAAGCATAC
715 ACTTAGGCATACGGAGTTCATTCCCA-GTCTAAGCATACGGAGTTCATTCCCAGTCTAAG-AT--
* * * * * * *
17748363 AGAGTTCATCAGACCGGACCGAGGGTTGTGACAACACATGCTAGGCTCGGGCATGTGCTAGTGTC
776 ---G-------GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
** *** *
17748428 ATATTTTTCTTCGTCGGGGCACCATTGTCGGAGCATCATCGGAGAACCTGACCGGCGGCATTGGG
831 GCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGG
*
17748493 GTTCCGA
896 GTTCCGG
*
17748500 CGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * * **
17748565 ATTGGCCCGCTATCCCTCAACAAACCTCGAGAACTAACACCCCCTTAACTAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* *
17748630 ATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* *
17748695 AATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCT
195 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * * * * * * **
17748760 TGT-TAACAAAGTTTCGGGCCAAAACTCTTTCCAAAAAAATTTTAAAATATCCCGAACCACAAAA
260 CGTCT-ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* *
17748824 AGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
*
17748889 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* **
17748954 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCCGTCTCTCTGGTCGATGTAG
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CCCGTCTCTCTGGCCGGCGTAG
* * * * * * * *
17749019 TGCCCACCCGCCCACCCTCCTGCTCGTTTCATCGGTTGGCTCAGGCATACGAAGTTCATTCCCAG
518 TGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
** * * * * *
17749084 T-TGAAGATCAGACTGGAC-GAGGGTTGTGGTAGTAGGATCGGCAGCACACAAAGGGGGACCCGA
583 TCT-AAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA
* * * * * * * ** *
17749147 -TGATCCCCGGATTACGTATCCCACCCC-CTGGCCAGATGAAAGCCCGCACGCTCGTTTCATGGG
647 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* * *
17749210 TTGACTCAGGCATACGGAGTTCATTCCCACTCTAAGCGTACGGAGTTCATTCCCAGTCTAAGATC
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-
* * *
17749275 GGACCGGACCGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
776 GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
* ** ** * * **
17749340 TCATCAAGGCACCATC-GTGGAAGCATCGTCGGAGAACCTGACCGACGACATTGGGGTTCCAA
841 TCGTCGGGGCACCATCACCGG-AGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * *
17749402 CGATCGGAGGGG-TGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCATATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
*
17749466 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
17749531 CAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* *
17749596 ATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTGCATGCCAACAAAAATACAAGGATCAT
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* *
17749661 GTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAAAATTTTTACAAAAAT-CAGAACCGCAAAA
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTTA-AAAAATCCTGAACCGTAAAA
*
17749724 AGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* ** * *
17749789 GGGGACTGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGGAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
*
17749854 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGTCCGGCGTAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * *
17749919 ----GCCCACCCGCTCGCCCGCTCGTTTCTTCGGTTGGATTAGGCATACGAAGTTCATTCCCAGT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * *
17749980 CTAAGATCAGACCAGACCGAGGGTTGCGGCAGCA-CATGCTGG--GCTCGGGCATGTGCTGGGG-
584 CTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGAT-C-GGCAGCAC--GCA-GAG--GGGGA
* **** ** * * * ** * * * * ** *
17750041 -CTGCATTTTTCTTCGTC-GGGGCA--CC-ATCGTCGGAGCATCGCCGGAGAACCCG-AC-CGAC
642 CCCG-ACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG-GC--CGGCTGAGCGCCCGCACGC-TC
* * * ** * * * * * ** * *
17750099 G--ACATTGGGTTCCAACGATTAGGGGGGT-CGGGGGGT-GTGCGCA-AATGA-TATACGGAGTT
702 GTTTC-GTGGGTT--GAC--TTA--GGCATAC-GGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * ** * * *
17750158 CATTCCCAGTCTAAGATCAGACCAGACCAAGATTTGCGGCAGCATATACTGGGCTCGAGCATGTG
759 CATTCCCAGTCTAAGAT-GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTG
** * **
17750223 CTGGTGCCGCATTTTTCTTCGTC---G-------A----AGCATCCCCGGAGAACCTGACTGATG
823 CTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCG
* *
17750274 GCATTGAGGTTCTGG
888 GCATTGGGGTTCCGG
* *
17750289 CGATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGTCCCTTAT
1 CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* *
17750354 ATTGGCCCCTTATCCCTCATCAAACCTGGAGAACTCACACCCCCTTAAACG-GCATTTGAGATTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA-GAGCATTTGAGATTT
* *
17750418 TACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGATACTTTTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* * * *
17750483 AAATCTTGTACAGTTCTAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAATAAAAATACAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * * *
17750548 ATGTCTACCAAGTTTGGGGCCAAAACACCTTCGGAAAAAATTTTAAAAAATCCCGAATCATAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* * * * *
17750613 ATTTTCTAAAATCGTGAAAAATGGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* *
17750678 AGGGACCATTGCATGAATTTGCAAGCCATAAAAATGGCATTGGCA-GCAGAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* *
17750742 CCTAAACCCACCTTCCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * *
17750807 GCCCGCCCGCCCGCAT-----GCTCGTTTCGTCGGTTTGCTTAGGCATACGGACTTCATTCCCAT
519 GCCCGCCCGCCCGC-TCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
* ** * * * *
17750867 TATAAGATTGGACCAGACTGAGGGTTGTGGCAGCAAGATCGACAGCACGCAGAGGGGGA-CCGGC
583 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
* * * *
17750931 CGATCCCCGGCTTGTGCATCCCGTCCCTC-GGCCGGTTGAGCACCCGCACGCTCGTTTCGTGGGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
17750995 TGACTTAGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---------A---T----TGG
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGG
* * * * *
17751035 ACCAGACCAAGGGTTGCAGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCTGCATTTGTCTTC
778 ACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
* * ** * * * * * * * *
17751100 GCCAGGGCACCATCGTCGGAGCATCGCCAGG-GACCCTGACCGACGACGTTGAGGTTTCGA
843 GTCGGGGCACCATCACCGGAGCATCGTC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * *
17751160 CGATCGGGGGGGGCCGGGGGGTGTGCGCAAATGATGTGCGATAGGTGCTGGTATTTGGCCCTTAT
1 CGATC-GGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* *
17751225 ATTGGCCCCTTA-CCTCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTCAGATTT
65 ATTGGCCCCCTATCC-CTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
* * *
17751289 TATAGGTTTGCTGCCAGTAGCCATGAAAGTGTCTGAAATGGGGACACTTCTTTCAAATGGTCACA
129 TACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACA
* * * *
17751354 AAATCTTGTACACTTCGAGTTTTTAGTTGAAGTTTTTTGTACATGCCAAAAAAAATACAAGGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * *
17751419 ACGTGTACCAAGTATGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGTAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* * * *
17751484 TGTTTCAAAAATCATGAAAAATAGAACATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
*
17751549 AGGGACCATTAG-ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGT
389 AGGGACCATT-GTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
* * * * *
17751613 GCCTAAACCCACCTAGCACCCTATCGATCCACGGCTTACGCATCCTGTCTCCCTGGCCGGCATAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
* * * * *
17751678 T----GCCCG---TC-CGCCCGCTCGTTTCGTCGATTAGCTTAGGCATATGGAGTTCATCCCCAG
518 TGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
* * ** * *
17751735 TCTAAGA-CTGGACTAGACTGAGGGTTGCGGCAGCAGGATCAACAGCACACAGAGGGGGACCTGA
583 TCTAAGATC-AGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA
* * * * *
17751799 CCGATCCCCGGCTTACGCATCCTGCCCCTCTGGCCGGTTAAGCGCCTGCACGCTCGTTTCGTGGG
647 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
17751864 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-
* * * * * * * ** *
17751929 GGATCAGACCGAGGCTTGTGGCAGCACATCCTGGGCTCGAGCACGTGTTGGTGATGTATTTTTCT
776 GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
* ** * * *
17751994 TCGTCGGGGCACCATCGCCGGAGCATCACCGAAGAACCTGACCAGCGGTATTGGGGTTCCGG
841 TCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * * *** *
17752056 CGATCGAGGGGTCGGGGGGGGTGTGCGCACATGATGCATGATGGGTGCTGGTACTT-GACCTTAT
1 CGATCGGGGGGGC-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* *
17752120 ATTGGCCCCCTATCCCTCATCAACCCTCGAGAACTCATACCCCCTTAAAGAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
*
17752185 ACAGGTTTGCTGCCGGTAGCCATTAAAGTGTCTG-AATGGGGACACTTTTTTCAAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* * *
17752249 AATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCA
195 AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCA
* * * * * *
17752314 TGTCTAACAAGTTTGGGGCCAAAACACCTTTCGAAAAAATTTT-AAAAATCCTGAACAGTTAAAA
260 CGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA
* *
17752378 GTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTAGCCATGAAACTTCACGTGAAGGCTTAA
325 GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAA
* * * *
17752443 GGGACCATTGTATGAATTTACAAGGCATAAGAATGGCGTTGGCATGCAGAAATATGAAGATGTGC
390 GGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGC
* ** *
17752508 CTAAACCCA-CTACCAGCCTATCGATCCATAGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGCG
455 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * *
17752572 CCCGCCCG-CC-CT--CCCGCACATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTTCCAGTC
520 CCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * ** * *
17752633 TAAGATCAGATCAAACCGAGGGTTACGATAGCAGGATCGGCAGCACGCAGAGGCGGACCCGGCCG
585 TAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCG
* ** * * *
17752698 ATCCCCGGGGTCACGCATTCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCATGGGTT
650 ATCCCC-GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
*
17752763 GACTTAGGCATACGAAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A--C-----T-G-
714 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGGA
* * *
17752806 ---GACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGTTGGTGCCACATTTTTCTTCG
779 CCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* *** * * * * *
17752868 TCAGGGCACCATCATTAGAGCATCGCCAGAGAACATGACCGGCGGCATTGGGGTTTCGA
844 TCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
*
17752927 CGATCGGGGGGGCCGAGGGGGTGTGCGCACATGATGCGCGATGGGTGCTGGTACTTGGCCCTTAT
1 CGATCGGGGGGGCCG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
** * * * *
17752992 ATTTTCCCCCTATCTCTCATCAAACCTTGAGAACTCACACCCACTTAAAAAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
17753057 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCCAAA-GGTCACA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT-CAAATGGTCACA
* *
17753121 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAATGATC
194 AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATC
* * * * ** **
17753186 TCGTCTACCAAGTTTGGGGCCAAAAATCCTTTCGAGAAAATTTTAAAAAATCCCAAACCACAAAA
259 ACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAA
* *
17753251 AGTTTCTAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
324 AGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTA
* * * *
17753316 AGGGAGCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGGCACACAAAAATATGAAGATGTG
389 AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTG
* * *
17753381 CCTAAACCCACCTACCACCCTATCGATCCACGACTTGCTCATCCCGTCTCTCTGGCCGACGTAGT
454 CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT
* * * * *
17753446 GCCCGTCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCTAAT
519 GCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGT
* * * ** *
17753511 CTAAGAT-TGAACAGGACCGAGGGTTATGGCAGCAAGATCGGCAGCACGCAG-GGGGAGACCCGA
584 CTAAGATCAGACCA-GACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGG-GACCCGA
* * * * *
17753574 CCGATCCTCAGCTTGCGCATCCTGCCCCTCTGGCCGTCTGAGCGCCCGCACGCTCGTTTCGCGGG
647 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* ** ** * * *
17753639 TTGATTTAGGCATACGGAGTTCATTCTGAAACTAAGCATATGAAGTTCATTCCTAGTCTAAGATC
712 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT-
* * * *
17753704 GGACCAGACCGAGGGTTGCGACAGCACATGTTTGGCTCGGGCATGTGCTGGTGCTGCATTTTTCT
776 GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
** ** *
17753769 TCACCGGGTTACCATCACC-G-G-A----C----AACCTGACCGGCGGCATTGGGGTTCCGA
841 TCGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
* * *
17753820 CGAT-TGGGGGGCCGGGGGGGTGTGTGTGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTT
1 CGATCGGGGGGGCC--GGGGG-GTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* *
17753884 ATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGATATT
63 ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
17753949 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCCAAA-GGTCA
128 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT-CAAATGGTCA
*
17754013 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAATGA
192 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA
* * * * * ** *
17754078 TCACATCTTCTAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAGAAAATCCCAAACCGCAA
257 TCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAA
* * ** *
17754143 AAAGTTTTAAAAATCGTGAAAAATAGAAAATAAGTCGTCTTACCATGAAACTTCACGTGAAGGCT
322 AAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCT
*
17754208 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATG
387 TAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATG
*** * ** * *
17754273 TGCCTAAACCCACCTACCACCCTATCGATCCAAAACATATGCATCCCGTCTCTCTAGCCGGTGTA
452 TGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA
* * * *
17754338 GTGCCCGCCCACCCGC-CTGCCAGCTCGTTTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCC
517 GTGCCCGCCCGCCCGCTC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
* * * ** * *
17754402 AGTCTAAGATCAAATCGGACCAAGGGTTGCGGCAGCAGGATCCGCAGCACACAGAGGGGGACCCG
581 AGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* * * * * * * *
17754467 ACCGATCTCCGGCTTGTGCATCCCGCCTCTCTTGCTGGCTAAGTGCCCGCACGCTCAGAGTTC--
646 ACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTC-G-TTTCGT
* ** * * ** * * * ** ** * ** *
17754530 --ATT--CCCAGTC-TA---AGATCA-GACCGGACTGAGGGTTACGGTAGCACA-TGCTGGGCT-
709 GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT-AAGCATACGG-AGTTCATTCCCAGTCTA
* ** * * * ** * * * * * * *
17754584 CG--GG--CATGTGCTAGTGCTGC-ATATCTCATCGTCGGGGCAC---CATCT-C-CG-G-AGCA
772 AGATGGACCA-GACCGAGGGTTGCGGCAGCACAT-G-CTGGGCTCGGGCATGTGCTGGTGCCGCA
* * * * * * ** *
17754637 ----TC-AC--CGGAGAACC-TGACCCGTG-GC-T--TTGG-G---GT-TTCGG-TG-A-TGGGG
834 TTTTTCTTCGTCGGGGCACCATCA-CCG-GAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGG
**
17754682 -GGCGG
897 TTCCGG
* ** * * ** * * * ** **
17754687 AGGGGCGGTGTGCGCAC--ATGATGTGCG-A-ATGGTGCTG-GTACTTGGCCCTTATA-TTGGCC
1 -CGATCGG-GGGGGC-CGGGGGGTGTGCGCACATGATG-TGCG-A-TGGGTGCTGGTACTTGG--
* **** * * *** ** ** * *** **** *
17754746 CCCTATCCCTCATCAAACCTCAAGAACTCA-CACCCCCTTAAAGAGCATTTGA-TATTTTACAG-
58 CCCT-T--AT-ATTGGCCCCCTATCCCTCATCA-AACC-TCGAGAAC-TCACACCCCCTTAAAGA
* ** * * ** ** * * * *
17754808 G-TTTGCTGCCAGTAGCCATTA-AAGTGT-CTGAAATGGGGACACTT---TTTTC-CAAA---GG
116 GCATT--TG--AG-A--TTTTACAGGTTTGCTGCCA-GTAGCCA-TTAAAGTGTCTGAAATGGGG
* **** * ** ** ****
17754863 TCAC-AAAATC---TTGT-AC-ACTTCGAGTTTTT-----------AGCTGAATTTTTTTGTGCA
172 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* * * * * *
17754911 TGCCAAAAAAAATACAATGATCTCGTCTACCAAGTTTGGGGCCAAAAATCCTTTCGAGAAAATTT
237 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
** ** * *
17754976 TAAAAAATCCCAAACCACAAAAAGTTTCTAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCA
302 TAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
* *
17755041 TGAAACTTCACGTGAAGGCTTAAGGGAGCATTGTATGAATTTAAAAGCCATAAAAATGGCATTGG
367 TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
* * *
17755106 CACACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATC
432 CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
* * * * *
17755171 CCGTCACTCTAGCCGGCGTAGTGCCCGCCCGCCCGCCCACCGGCTCGTTTCGTCGGTTGGCTTAG
497 CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * * * *
17755236 GCATACGAAATTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTGGTGGCAGCAAGATTGGCA
562 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCA
* * * * * *
17755301 GCACGCAGAGGGGGACCC-AGTCGATCCTCGGCTTGCGCTTCACGCCTCTCTGGCCGGCTGAGTG
627 GCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
*
17755365 CCTGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
691 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* ** ** *
17755430 GTTCATTCCTAGTCTGAA-ATAGGACTGGACCGAGGGTTGCGGCAGCGTATGCTAGGCTCGGGCA
756 GTTCATTCCCAGTCT-AAGAT-GGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCA
* *** *
17755494 TGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATGGTCGGAGCATCAAT-GGAGAACCTGAC
819 TGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATC-GTCGGAGAACCTGAC
* *
17755558 CGGCAGCAATGGGGTTCCGG
883 CGGCGGCATTGGGGTTCCGG
* * *
17755578 TGATC-GGGGGGCCAGGGGGTGTGCGCACATGCTGTGCGATGGGTGCTGGTACTTGGCCCTTATA
1 CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* *
17755642 TTTGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCTTTTGAGATTTTA
66 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
17755707 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
131 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * * *
17755772 ATTTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTTCATGCCAAAAAAAATACAAGGATCGC
196 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* ** * *
17755837 ATCTACCAAGTTTGGGGCTGAAACTCCTTCCGAAAAAATTTTAAAAAGTCTTGAACCGT-AAAAG
261 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAG
* * * * *
17755901 TTTCGAAAATCGTGAAAAATAGAAAATGAGTCATCTTGCCATAAAACTTCACGTGAAGGCTTAAG
326 TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
*
17755966 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
391 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCC
* * * *
17756031 TAAACCCACCTACCACCCTATCGATCCACAGCTTGTGCATGCCATCTCTCTGGCCGGCGTAGT--
456 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * *
17756094 --GCCCG--C-C-CGCCCGCTCGTTTCATCGATTGGCTTAGGCATACGGAATTCATTCCCAGTCT
521 CCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * * * * **
17756153 AAGATCAGATCGGACCGAGGGTTGCGGTAGCAAGATCGACAGCACGCAGAGTGGGCCCCGGTCGA
586 AAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGA
17756218 TCCCCGGCTTGCGCATCCCG-CCC-CT------CT--------G---G--C----CGTGGGTTGA
651 TCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
*
17756258 CTTAGGCATACAGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C-------G---
716 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGGACC
* * * * * * **
17756299 A-ACTGAGGGTTGTGGTAGCACATGCTTGGCTCGGGCATGTGCTGGTGCCGTAATTTTCTTCACC
781 AGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * *
17756363 GGGGCACCATCGCCGGAGCATCG-CGGGAGAACCTGACCTGCGGCATTGGGGTTCCCG
846 GGGGCACCATCACCGGAGCATCGTC-GGAGAACCTGACCGGCGGCATTGGGGTTCCGG
*
17756420 CGATCGGGGGGGCCGGGGGGATGTGCGCACATGATGTGCGATGGGTGCTGGTACGTGGCCCTTAT
1 CGATCGGGGGGGCCGGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * *
17756485 ATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCATATCCCCTTAAAGAGCATTTGAGATTTT
65 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
* * *
17756550 ACAGGTTTACTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCGAATGGTCACAA
130 ACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
* * * *
17756615 AATCTTGTACACTTCGAATTTTT-GACTGAATTTTTTTGTGCATGCCAAAAAAAAAAAAAAACAG
195 AATCTTGTACACTTCGAGTTTTTAG-CTGAATTTTTTTGTGCATGCC-----AACAAAAATACAA
* * * *
17756679 GGATCAAGTCTACCAAGTTTTGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCTGAATCG
254 GGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCG
* ** * * *
17756744 TAAAAGGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAT
319 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* * *
17756809 GCTTGAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGAAAGCAGAAATATGAAG
384 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * *
17756874 ATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTACGCATCCCGTCTCTTTGGCCGGC
449 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGC
* * ** * **
17756939 GTAGTGCCCGCCCACCTGC-CTGCATGCTCATTTCGTCGGTTGGCTTAGGCATACAAAGTTCATT
514 GTAGTGCCCGCCCGCCCGCTC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * *
17757003 CCAAGTCTAAGATCAGACTGAACTGAGGGTTCTGGCAATAGGGTTGCGGTAGCAAGATCGGCAGC
578 CCCAGTCTAAGATCAGAC----C--A--G-ACT-G----AGGGTTGCGGCAGCAGGATCGGCAGC
* * *
17757068 ACGCAG-GGTGGGCCCCGATCGATCCCCGACTTGCGCATCCCG-CCC-CT------CT-------
629 ACGCAGAGG-GGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
17757117 -G---G--C----CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G-
693 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGT
* * * *
17757167 --------A-TC-------G---A-ACTGAGGGTTGTGGTAGCACATGCTTGGCTCGGGCATGTG
758 TCATTCCCAGTCTAAGATGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTG
* ** * * *
17757212 CTGGTGCCGCAATTTTCTTCACCGGGGCACCATCGCCGGAGCATCG-CGGGAGAACCTGACCAGT
823 CTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGTC-GGAGAACCTGACCGGC
*
17757276 GGCATTGGGGTTCCGA
887 GGCATTGGGGTTCCGG
* * * *
17757292 TGATCGGGGGGCCCGGGGGGGGATGTGCGCACATGATGTGAGATGGGTGCTGGTAGTTGGCCCTT
1 CGATCGGGGGGGCC--GGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTT
* ** *
17757357 ATATTGTCCCCCTATCCCTCATCAAACCTTAAGAACTCACACCCCCTTAAAGTGCATTTGAGATT
63 ATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATT
* * * * * *
17757422 TTACAGGTTTGTTGCCAGTAGCCATTTAAGTATCTAAAATGGGGTCATTTTTTTCAAATGGTCAC
128 TTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCAC
* * * * * * *
17757487 AGAATCTTGTACACTTCGATTTTTTAGCTAAAGTTTTTTGTGCACGCCAAAAAAAATAAAAGGAT
193 AAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGAT
* * ** *
17757552 CACGTCTACTAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCAAAACCGGAAA
258 CACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAA
* ** * * * * * *
17757617 ATGTTTTGAAAATCGTGAAAAAAAGAAAACGAGTTGTCTTGCCTTGAAACTTCATGTGAGGGCTT
323 AAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTT
17757682 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
388 AAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGT
* * * * *
17757747 GCCTAAACCAACCTACCACCCTATCGATCCACGGTTTGTGCATCCCGTCCCTCTGGCCGACGTAG
453 GCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAG
** * *
17757812 T----GATCG--C-C-CGCCCACTCGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAG
518 TGCCCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAG
* * *
17757869 TCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCAGCAGCACGCAGAGGGGTACCCGAC
583 TCTAAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGAC
** * * * * *
17757934 CGATCCCCGATTTGCGCATCCCACCCCTCTGGCCGGTTGAGCGCCCGCACGCTAGTTCCGTGAGT
648 CGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGT
* * *
17757999 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGTAGTTTATTCCCAGTCGAAGATTG
713 TGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA-TG
* * * * *
17758064 GACCAGACCGAGGGTTGTGGCAGTAGATGCTGGGCTAGAGCATGTGCTGGTGCCGCATTTTTCTT
777 GACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT
* * * *
17758129 CATCGGGGCACCATCGCCGGAGCATCATCGGAGAACCTGACCGGCGGCATTGGGGTACCGG
842 CGTCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
17758190 CGGCATTGTGGTTCCAACGATCGGGGGGCCGAGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
1 C-G-A-------T----CG---GGGGGGCC--GGGGGGTGTGCGCACATGATGTGCGATGGGTGC
*
17758255 TGGTACTTGGCCCTTATATTGGCACCCTATCCCTCATCAAACCTC
48 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC
17758300 CGTACGCCTA
Statistics
Matches: 26841, Mismatches: 4182, Indels: 2698
0.80 0.12 0.08
Matches are distributed among these distances:
840 34 0.00
841 1 0.00
842 107 0.00
843 17 0.00
844 206 0.01
845 2 0.00
846 4 0.00
847 58 0.00
848 12 0.00
849 757 0.03
850 201 0.01
851 4 0.00
852 5 0.00
853 424 0.02
854 7 0.00
855 4 0.00
857 69 0.00
858 59 0.00
859 27 0.00
860 133 0.00
861 412 0.02
862 10 0.00
863 1 0.00
864 67 0.00
865 84 0.00
866 143 0.01
867 178 0.01
868 660 0.02
869 429 0.02
870 86 0.00
871 579 0.02
872 495 0.02
873 257 0.01
874 572 0.02
875 132 0.00
876 446 0.02
877 581 0.02
878 459 0.02
879 273 0.01
880 233 0.01
881 605 0.02
882 182 0.01
883 31 0.00
884 421 0.02
885 383 0.01
886 50 0.00
887 65 0.00
888 495 0.02
889 693 0.03
890 236 0.01
891 441 0.02
892 635 0.02
893 691 0.03
894 1096 0.04
895 196 0.01
896 577 0.02
897 864 0.03
898 1050 0.04
899 563 0.02
900 870 0.03
901 936 0.03
902 1043 0.04
903 1389 0.05
904 337 0.01
905 462 0.02
906 527 0.02
907 76 0.00
908 5 0.00
909 59 0.00
910 9 0.00
911 5 0.00
912 129 0.00
913 144 0.01
914 292 0.01
915 192 0.01
916 76 0.00
917 105 0.00
918 40 0.00
919 16 0.00
920 10 0.00
921 11 0.00
922 25 0.00
923 588 0.02
924 10 0.00
925 5 0.00
926 39 0.00
927 191 0.01
928 15 0.00
929 25 0.00
930 7 0.00
931 15 0.00
932 6 0.00
933 8 0.00
934 9 0.00
935 11 0.00
936 14 0.00
937 3 0.00
938 4 0.00
939 4 0.00
941 13 0.00
942 7 0.00
943 14 0.00
944 11 0.00
945 14 0.00
946 5 0.00
947 10 0.00
948 6 0.00
949 11 0.00
950 3 0.00
951 3 0.00
952 9 0.00
953 3 0.00
954 8 0.00
955 19 0.00
956 14 0.00
957 23 0.00
958 29 0.00
959 8 0.00
960 12 0.00
961 21 0.00
962 12 0.00
963 55 0.00
964 47 0.00
965 20 0.00
966 27 0.00
967 22 0.00
968 6 0.00
969 22 0.00
970 7 0.00
971 2 0.00
972 10 0.00
973 15 0.00
974 18 0.00
975 3 0.00
976 25 0.00
977 9 0.00
978 5 0.00
979 13 0.00
980 24 0.00
981 13 0.00
982 5 0.00
983 3 0.00
984 4 0.00
985 22 0.00
986 16 0.00
987 13 0.00
988 27 0.00
989 27 0.00
990 49 0.00
991 42 0.00
992 29 0.00
993 13 0.00
994 3 0.00
995 23 0.00
996 30 0.00
997 22 0.00
998 17 0.00
999 20 0.00
1000 9 0.00
1001 7 0.00
1002 9 0.00
1003 20 0.00
1004 18 0.00
1005 24 0.00
1006 7 0.00
1007 6 0.00
1008 12 0.00
1009 9 0.00
1010 2 0.00
1011 14 0.00
1012 4 0.00
1013 6 0.00
1014 8 0.00
1015 6 0.00
1016 7 0.00
1017 2 0.00
1018 9 0.00
1019 12 0.00
1020 2 0.00
1021 7 0.00
1022 2 0.00
1023 10 0.00
1024 282 0.01
1025 352 0.01
1026 314 0.01
1027 497 0.02
1028 327 0.01
1029 524 0.02
1030 324 0.01
1031 348 0.01
1032 431 0.02
1033 298 0.01
1034 203 0.01
1035 269 0.01
1036 247 0.01
1037 206 0.01
1038 219 0.01
1039 284 0.01
1040 284 0.01
1041 204 0.01
1042 281 0.01
1043 251 0.01
1044 212 0.01
1045 260 0.01
1046 244 0.01
1047 213 0.01
1048 352 0.01
1049 128 0.00
1050 272 0.01
1051 146 0.01
1052 229 0.01
1053 101 0.00
1054 108 0.00
1055 414 0.02
1056 118 0.00
1057 97 0.00
1058 87 0.00
1059 171 0.01
1060 256 0.01
1061 159 0.01
1062 104 0.00
1063 71 0.00
1064 77 0.00
1065 69 0.00
1066 67 0.00
1067 83 0.00
1068 113 0.00
1069 67 0.00
1070 32 0.00
1071 50 0.00
1072 251 0.01
1073 26 0.00
1074 39 0.00
1075 33 0.00
1076 60 0.00
1077 211 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (902 bp):
CGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAG
TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCC
TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
CCGCCCGCCCGCTCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
AAGATCAGACCAGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGA
TCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATGGACC
AGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
GGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGG
Found at i:17727600 original size:159 final size:159
Alignment explanation
Indices: 17727370--17727724 Score: 500
Period size: 159 Copynumber: 2.2 Consensus size: 159
17727360 CGTTTTCTCA
* * * * *
17727370 GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGATCAAACTGAGGGTTGCGATCGC
1 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAAACTGAGGGTTGCGATAGC
* * * * *
17727435 AGGATTGGCAGCACGCAGAA-GGGG-CCCTGGTCGATCCCCGGCTTGTGCATCTCGCCCCTCTGG
66 AAGATTGGCAGCACGCA-AAGGGGGACCC-GGCCAATCCCCGGCTTGCGCATCCCGCCCCTCTGG
* * *
17727498 CCGGCTGAGCGCCCGTATGCTCATTTCATGG
129 CCGACTGAGCGCCCGCACGCTCATTTCATGG
* * *
17727529 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-TCGAGGGTTGTGGTAG
1 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAAACT-GAGGGTTGCGATAG
17727593 CAAGATTGGCAGCACGCAAAGGGGGACCCGGCCAATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
65 CAAGATTGGCAGCACGCAAAGGGGGACCCGGCCAATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* *
17727658 CGACTGAGCGCCCGCACGCTCGTTTCGTGG
130 CGACTGAGCGCCCGCACGCTCATTTCATGG
17727688 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
1 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
17727725 CATACGGAGT
Statistics
Matches: 175, Mismatches: 18, Indels: 6
0.88 0.09 0.03
Matches are distributed among these distances:
158 3 0.02
159 169 0.97
160 3 0.02
ACGTcount: A:0.19, C:0.28, G:0.30, T:0.23
Consensus pattern (159 bp):
GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAAACTGAGGGTTGCGATAGC
AAGATTGGCAGCACGCAAAGGGGGACCCGGCCAATCCCCGGCTTGCGCATCCCGCCCCTCTGGCC
GACTGAGCGCCCGCACGCTCATTTCATGG
Found at i:17732060 original size:26 final size:26
Alignment explanation
Indices: 17732024--17732073 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
17732014 GACTTAGGCA
17732024 TACGGAGTTCATTCCCAGTCTAAGCG
1 TACGGAGTTCATTCCCAGTCTAAGCG
*
17732050 TACGGAGTTCATTGCCAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
17732074 ATTGGACCGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.24, G:0.24, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCG
Found at i:17732942 original size:26 final size:26
Alignment explanation
Indices: 17732913--17732965 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17732903 GTTGACTTAG
*
17732913 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17732939 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17732965 G
1 G
17732966 ATCAGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17733854 original size:26 final size:26
Alignment explanation
Indices: 17733818--17733868 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
17733808 TGACTTAGGC
17733818 ATACAGAGTTCATTCCCAGTCTAAGT
1 ATACAGAGTTCATTCCCAGTCTAAGT
*
17733844 ATACGGAGTTCATTCCCAGTCTAAG
1 ATACAGAGTTCATTCCCAGTCTAAG
17733869 ATCAGACCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.24, G:0.18, T:0.29
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAGTCTAAGT
Found at i:17734770 original size:26 final size:26
Alignment explanation
Indices: 17734718--17734770 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
17734708 GTTGACTTAG
** *
17734718 GCATACGGAGTTCATTCTTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTATAA
17734744 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTTCATTCCCAGTATAA
17734770 G
1 G
17734771 ATCAGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTATAA
Found at i:17736519 original size:26 final size:26
Alignment explanation
Indices: 17736483--17736535 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17736473 GTTGACTTAG
*
17736483 GCATACGGAGTCCATTCCCAGTCTAA
1 GCATACGGAGTCCATTCCCAGTATAA
*
17736509 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACGGAGTCCATTCCCAGTATAA
17736535 G
1 G
17736536 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.26, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTCCATTCCCAGTATAA
Found at i:17737403 original size:26 final size:26
Alignment explanation
Indices: 17737367--17737419 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
17737357 GCTGACTTAG
17737367 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17737393 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17737419 G
1 G
17737420 ATTGAACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17738303 original size:26 final size:26
Alignment explanation
Indices: 17738267--17738318 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
17738257 TTGACTTATT
*
17738267 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGGAGTTCATTCCCAGTATAAG
17738293 CATACGGAGTTCATTCCCAGTATAAG
1 CATACGGAGTTCATTCCCAGTATAAG
17738319 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.25, G:0.19, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGTATAAG
Found at i:17741861 original size:26 final size:26
Alignment explanation
Indices: 17741832--17741884 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17741822 GTTGAGTTAG
*
17741832 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
17741858 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17741884 G
1 G
17741885 ACTGGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17742000 original size:185 final size:185
Alignment explanation
Indices: 17741673--17742085 Score: 571
Period size: 185 Copynumber: 2.2 Consensus size: 185
17741663 GTTGGCTTAG
* * * **
17741673 GCATACGGAGTTCATTCCCATTCTAAGATCAGACCGAATCGAGGGTTGTGGAAGCAGGATCGACA
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACCGAATCGAGAGTTACGGAAGCAGGATCGACA
*
17741738 GCACGTAGAGGGGCACCCGATCGATCCTCGGCATGCGCATCCCGCCCCTCTGGCCGACGGAGCGC
66 GCACGTAGAGGGGCACCCGATCGATCCTCGGCATGCGCATCCCGCCCCTCTGGCCGACGGAGCAC
* * *
17741803 CCGCATGCTCGTTTCGTGGGTTGAGTTAGGCATACGGAGTTGATTCCCAGTCTAA
131 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
17741858 GCATACGGAGTTCATTCCTAGTCTAAGA-CTGGACCGAA-CTGAGAGTTACGGTAGTAGGATCGA
1 GCATACGGAGTTCATTCCCAATCTAAGATC-GGACCGAATC-GAGAGTTACGGAAGCAGGATCGA
* * * * * **
17741921 CAGCATGTAGAGGGGGACCCGGTCGATCC-CTGGCTTGCGCATCTCGCCCCTCTGGCCGATTGAG
64 CAGCACGTAGAGGGGCACCCGATCGATCCTC-GGCATGCGCATCCCGCCCCTCTGGCCGACGGAG
*
17741985 CACCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
128 CACCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
17742043 GCATACGAAGTTCATTCCCAATCTAAGATCGGACCGGATCGAG
1 GCATACGGAGTTCATTCCCAATCTAAGATCGGACCGAATCGAG
17742086 GGTTGCGACA
Statistics
Matches: 199, Mismatches: 24, Indels: 10
0.85 0.10 0.04
Matches are distributed among these distances:
184 3 0.02
185 194 0.97
186 2 0.01
ACGTcount: A:0.22, C:0.27, G:0.29, T:0.23
Consensus pattern (185 bp):
GCATACGGAGTTCATTCCCAATCTAAGATCGGACCGAATCGAGAGTTACGGAAGCAGGATCGACA
GCACGTAGAGGGGCACCCGATCGATCCTCGGCATGCGCATCCCGCCCCTCTGGCCGACGGAGCAC
CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:17742054 original size:26 final size:26
Alignment explanation
Indices: 17742017--17742069 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17742007 GTTGACTTAG
* *
17742017 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
17742043 GCATACGAAGTTCATTCCCAATCTAA
1 GCATACGAAGTTCATTCCCAATCTAA
17742069 G
1 G
17742070 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAATCTAA
Found at i:17743819 original size:26 final size:26
Alignment explanation
Indices: 17743782--17743834 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17743772 GTTGCCTTAG
* *
17743782 GCATACGGAGTTCATTCCCGGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17743808 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
17743834 G
1 G
17743835 ATAAGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:17744718 original size:26 final size:26
Alignment explanation
Indices: 17744679--17744757 Score: 115
Period size: 26 Copynumber: 3.0 Consensus size: 26
17744669 GTTGACTTAG
*
17744679 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAATTCATTCCCAGTCTAA
*
17744705 GCATACGGAATTCATTACCAGTCTAA
1 GCATACGGAATTCATTCCCAGTCTAA
*
17744731 GCATAC-GAAGTCAATTCCCAGTCTAA
1 GCATACGGAATTC-ATTCCCAGTCTAA
17744757 G
1 G
17744758 ATCAGACCAA
Statistics
Matches: 48, Mismatches: 4, Indels: 2
0.89 0.07 0.04
Matches are distributed among these distances:
25 5 0.10
26 43 0.90
ACGTcount: A:0.32, C:0.25, G:0.18, T:0.25
Consensus pattern (26 bp):
GCATACGGAATTCATTCCCAGTCTAA
Found at i:17745654 original size:26 final size:26
Alignment explanation
Indices: 17745606--17745658 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
17745596 GTTGACTTAT
* *
17745606 GCATACGGAGTTCACTCCTAGTCTAA
1 GCATACGGAGTTCACTACAAGTCTAA
* *
17745632 GCATATGGAGTTCATTACAAGTCTAA
1 GCATACGGAGTTCACTACAAGTCTAA
17745658 G
1 G
17745659 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCACTACAAGTCTAA
Found at i:17746543 original size:26 final size:26
Alignment explanation
Indices: 17746507--17746559 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17746497 GTTGACTTAG
17746507 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17746533 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17746559 G
1 G
17746560 ATCGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17747441 original size:26 final size:26
Alignment explanation
Indices: 17747405--17747457 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
17747395 GTTGACTTAG
17747405 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
17747431 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17747457 G
1 G
17747458 ATCGGATGGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:17748354 original size:26 final size:26
Alignment explanation
Indices: 17748305--17748371 Score: 100
Period size: 26 Copynumber: 2.6 Consensus size: 26
17748295 GTTGACTTAG
*
17748305 GCATACGGAGTTCATTCCATGTCTAA
1 GCATACAGAGTTCATTCCATGTCTAA
*
17748331 GCTTACAGAGTTCATTCTCA-GTCTAA
1 GCATACAGAGTTCATTC-CATGTCTAA
17748357 GCATACAGAGTTCAT
1 GCATACAGAGTTCAT
17748372 CAGACCGGAC
Statistics
Matches: 37, Mismatches: 3, Indels: 2
0.88 0.07 0.05
Matches are distributed among these distances:
26 35 0.95
27 2 0.05
ACGTcount: A:0.28, C:0.22, G:0.18, T:0.31
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCATGTCTAA
Found at i:17749252 original size:26 final size:26
Alignment explanation
Indices: 17749222--17749271 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
17749212 GACTCAGGCA
17749222 TACGGAGTTCATTCCCACTCTAAGCG
1 TACGGAGTTCATTCCCACTCTAAGCG
*
17749248 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCATTCCCACTCTAAG
17749272 ATCGGACCGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.28, G:0.20, T:0.28
Consensus pattern (26 bp):
TACGGAGTTCATTCCCACTCTAAGCG
Found at i:17751909 original size:26 final size:26
Alignment explanation
Indices: 17751873--17751925 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
17751863 GTTGACTTAG
17751873 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17751899 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
17751925 G
1 G
17751926 ATCGGATCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Done.