Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167940.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_201, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52044

Tables:   1   

This is table  1  of  1  ( 106 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
126--158
18
1.9
17
88
11
50
42
6
3
48
1.43
3--2817
179
16.3
178
75
11
1839
41
10
8
39
1.69
2599--2629
15
2.0
16
93
6
55
38
19
3
38
1.68
943--2689
535
3.3
528
77
8
1248
40
10
9
39
1.72
2821--4400
181
8.8
180
76
9
1193
39
9
9
41
1.71
2823--4341
356
4.2
352
77
9
1195
39
9
9
41
1.71
3903--3952
17
2.8
19
67
14
52
40
6
10
44
1.63
5065--5847
176
4.4
177
75
9
548
43
9
7
39
1.65
5065--5847
349
2.2
346
78
8
801
43
9
7
39
1.65
7509--8139
316
2.0
319
80
8
703
41
9
8
40
1.68
7826--8581
178
4.3
174
75
11
488
39
9
9
41
1.69
8720--9010
143
2.0
143
86
5
401
39
6
10
42
1.67
21690--21726
17
2.2
17
90
0
56
56
0
0
43
0.99
21829--21881
22
2.4
22
84
12
65
49
3
1
45
1.31
21909--21948
22
1.9
22
90
10
66
45
5
0
50
1.23
21983--22049
12
5.7
12
71
18
52
47
0
1
50
1.10
22017--22056
20
2.0
21
90
5
64
40
0
2
57
1.12
21972--22066
37
2.6
37
79
15
99
44
1
1
53
1.14
22018--22063
20
2.3
21
82
14
62
41
0
2
56
1.11
24171--24210
21
1.9
21
94
0
71
22
32
15
30
1.94
25139--25180
19
2.2
20
76
24
54
57
0
0
42
0.99
25132--25180
17
2.7
19
87
9
68
55
0
0
44
0.99
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
25866--25905
15
2.6
16
84
15
57
52
0
2
45
1.14
25969--26044
13
5.9
13
74
10
50
50
1
3
44
1.29
26192--26237
17
2.6
18
82
6
58
47
6
2
43
1.41
26614--26678
14
5.1
13
75
16
55
50
1
1
46
1.20
27337--27386
23
2.1
24
79
20
61
42
2
4
52
1.31
27453--27530
22
3.5
22
77
16
79
55
0
1
43
1.08
27458--27497
15
2.6
15
92
4
62
62
0
0
37
0.95
27476--27520
15
3.1
15
84
9
58
57
0
0
42
0.98
27659--27693
12
2.9
12
87
12
54
48
0
0
51
1.00
27659--27799
73
2.0
68
79
9
149
46
2
2
48
1.28
28215--28251
20
1.9
18
89
10
56
45
2
5
45
1.40
28555--28592
19
2.0
19
90
10
60
44
0
2
52
1.14
28722--28782
26
2.3
26
80
5
79
57
0
3
39
1.15
28738--28776
9
4.6
8
84
6
51
61
0
2
35
1.10
29479--29523
23
2.0
23
82
8
56
60
4
0
35
1.17
29772--29820
14
3.6
14
76
17
50
48
0
0
51
1.00
29755--29809
18
3.1
19
78
19
64
49
0
0
50
1.00
30235--30267
15
2.1
16
88
5
50
54
6
0
39
1.25
30306--30340
16
2.1
18
89
10
56
48
5
0
45
1.26
30519--30569
24
2.1
25
85
3
68
43
1
0
54
1.11
32282--32331
22
2.3
22
82
6
57
52
6
0
42
1.26
32491--32529
21
1.9
20
89
5
60
48
0
2
48
1.15
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
32606--32644
20
2.0
20
85
10
53
35
0
5
58
1.20
33526--33550
12
2.1
12
100
0
50
48
0
0
52
1.00
33875--33922
17
2.9
16
84
12
62
45
0
0
54
0.99
33894--33948
19
3.0
19
84
10
62
50
5
0
43
1.25
34239--34274
16
2.2
16
95
0
63
52
0
0
47
1.00
34945--35341
183
2.2
177
81
7
460
45
10
6
37
1.64
35398--35973
179
3.2
178
78
4
461
42
10
7
39
1.67
36203--36251
22
2.3
21
82
3
62
48
2
0
48
1.12
36829--36901
29
2.5
29
78
14
87
49
1
0
49
1.09
37154--37193
15
2.6
16
84
15
57
45
2
0
52
1.14
37344--37485
16
9.4
14
68
22
51
26
2
4
67
1.20
37350--37402
21
2.5
22
81
12
65
22
1
3
71
1.12
37391--37446
29
2.0
28
85
3
76
33
1
1
62
1.16
37357--37527
14
11.9
15
68
21
73
28
3
2
65
1.23
37472--37585
20
5.6
20
77
10
97
28
5
2
64
1.29
37400--37557
72
2.3
66
82
12
183
28
4
3
63
1.31
37940--37978
19
2.1
19
85
0
51
28
10
15
46
1.78
38096--38126
6
5.2
6
100
0
62
16
0
0
83
0.64
38082--38126
18
2.5
18
85
7
56
15
4
0
80
0.87
38151--38181
13
2.5
12
94
5
53
19
0
0
80
0.71
38199--38410
58
3.7
57
83
8
261
41
7
15
35
1.74
38713--38781
25
2.8
25
95
0
129
18
23
23
34
1.96
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
42415--42448
17
2.1
17
94
5
61
73
0
17
8
1.08
42418--42476
21
2.9
20
79
16
59
72
0
18
8
1.09
42428--42485
20
2.8
20
78
21
57
74
0
17
8
1.06
42424--42485
21
3.1
18
77
20
61
75
0
16
8
1.02
44151--44594
41
10.8
41
79
13
269
24
16
19
39
1.92
44176--44733
82
6.7
80
81
10
488
24
15
20
38
1.92
44282--44733
42
10.8
42
83
8
523
25
15
20
38
1.92
44918--44967
6
7.3
7
82
15
52
20
0
4
76
0.95
44913--44986
27
2.5
30
82
12
82
20
0
5
74
1.01
44933--45066
7
19.7
7
73
19
67
29
2
2
65
1.19
44930--45063
3
41.3
3
70
20
67
29
2
2
65
1.19
44912--44992
39
2.1
38
84
9
101
22
0
4
72
1.03
44986--45039
23
2.2
25
83
6
67
35
5
0
59
1.21
44930--45117
20
9.4
20
74
14
129
28
3
3
64
1.26
45483--45521
19
2.1
19
95
0
69
25
5
25
43
1.75
45937--45971
17
2.1
16
89
5
52
20
2
0
77
0.90
45979--46139
58
2.8
58
92
0
268
42
8
14
35
1.75
46738--46779
17
2.3
18
80
12
50
59
0
0
40
0.97
46733--46797
27
2.4
27
85
7
87
55
0
3
41
1.15
46731--46796
15
4.7
15
80
12
77
56
0
3
40
1.15
46733--46779
14
3.7
12
78
15
58
59
0
0
40
0.97
46853--46929
25
3.2
25
76
16
74
51
3
0
44
1.19
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
46947--46982
11
3.3
11
88
0
54
41
0
5
52
1.24
47040--47103
16
4.3
14
75
16
58
37
1
1
59
1.16
47033--47102
31
2.3
31
82
7
81
38
1
1
58
1.16
47371--47415
18
2.3
20
88
7
67
40
4
0
55
1.20
47663--47718
28
1.9
29
82
13
71
58
3
1
35
1.26
47929--47980
26
2.0
26
85
3
70
51
0
1
46
1.12
48160--48205
15
3.1
15
75
25
53
47
2
4
45
1.34
48214--48264
21
2.4
22
81
12
63
52
0
3
43
1.19
48275--48313
21
1.9
20
85
15
53
46
2
0
51
1.14
48413--48447
16
2.3
15
90
5
52
54
2
5
37
1.39
48459--48489
15
2.0
16
93
6
55
45
6
3
45
1.45
49178--49217
12
3.3
13
80
16
50
60
2
0
37
1.11
49228--49284
20
2.8
19
75
19
62
54
3
0
42
1.17
49227--49283
23
2.5
21
83
16
62
54
3
0
42
1.17
50656--50762
23
4.8
22
73
15
78
49
3
0
46
1.19
50859--50930
23
3.0
23
69
4
54
52
4
0
43
1.20
51367--51512
32
4.9
28
74
18
93
49
2
1
47
1.21
51346--51475
63
2.1
60
80
11
147
50
2
0
46
1.19

Tables:   1

The End!