Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167943.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_204, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51768

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1290--1386
32
3.2
32
62
19
80
35
13
9
42
1.76
1069--1405
59
5.7
58
88
4
453
34
12
8
45
1.71
1422--1492
13
6.1
12
73
17
60
77
1
5
15
1.02
1432--1500
17
4.1
17
70
20
56
78
1
5
14
1.01
1535--1560
4
6.5
4
100
0
52
53
0
0
46
1.00
2093--2143
25
2.1
23
85
7
66
50
13
5
29
1.65
2431--2617
22
8.6
21
71
20
102
68
2
4
24
1.22
2475--2654
23
8.1
22
71
17
99
68
2
3
25
1.17
2475--2569
43
2.2
44
84
3
120
65
3
3
28
1.23
2580--2621
19
2.2
19
91
0
66
83
0
7
9
0.81
2586--2623
14
2.9
13
85
11
51
84
0
5
10
0.77
2517--2653
12
11.2
12
71
19
52
70
1
3
24
1.12
2613--2661
25
2.0
25
83
0
62
65
2
4
28
1.22
5318--5350
16
2.1
16
94
0
57
36
0
9
54
1.32
6247--6326
19
4.2
19
80
6
99
48
28
0
22
1.51
7607--7668
31
2.0
31
100
0
124
38
12
3
45
1.59
9271--9345
30
2.5
30
97
0
141
37
10
5
46
1.61
14162--14231
36
1.9
37
97
2
133
48
10
17
24
1.77
15162--15221
26
2.4
25
83
5
75
61
0
1
36
1.06
15814--15910
15
6.1
16
66
21
53
48
1
1
49
1.14
16190--16218
14
2.0
15
93
6
51
65
0
0
34
0.93
16194--16247
28
2.0
27
85
10
74
62
0
1
35
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
16399--16430
14
2.1
16
88
11
50
21
0
3
75
0.95
16449--16519
25
2.8
24
74
19
63
69
2
5
22
1.23
17605--17659
24
2.4
22
77
11
56
54
3
0
41
1.18
17682--17719
19
2.1
18
90
5
58
55
0
0
44
0.99
19851--19922
22
3.1
22
78
4
72
40
1
2
55
1.23
20813--20897
21
4.0
21
70
3
62
34
17
17
30
1.94
20879--20924
21
2.2
21
84
0
56
23
15
17
43
1.87
29230--29279
21
2.4
21
100
0
100
56
4
8
32
1.47
29230--29285
21
2.7
21
94
2
87
55
3
7
33
1.45
29955--30180
62
3.6
62
74
9
199
38
11
9
39
1.74
29955--30149
65
3.1
61
73
8
171
37
11
10
40
1.76
32406--32449
17
2.6
16
82
10
52
31
0
11
56
1.35
32433--32520
44
2.1
44
85
6
119
30
2
6
60
1.35
32433--32540
44
2.5
44
80
5
116
26
1
7
63
1.31
32677--32746
6
10.7
6
77
22
70
78
2
2
15
0.99
33626--33712
3
30.3
3
73
13
67
64
0
6
28
1.19
33652--33707
20
2.8
21
79
17
73
64
0
5
30
1.16
33754--33798
21
2.1
21
88
8
65
20
33
26
20
1.97
34416--34453
16
2.3
17
86
4
51
21
2
7
68
1.28
35004--35036
16
2.1
16
100
0
66
36
24
15
24
1.93
35903--35954
27
2.0
26
84
3
68
44
9
1
44
1.48
36011--36048
3
12.3
3
94
5
67
31
0
2
65
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
36121--36177
24
2.4
25
85
5
73
77
5
1
15
1.03
37413--37470
28
2.1
28
96
0
107
41
12
17
29
1.85
38494--38531
10
3.8
10
96
0
67
52
10
0
36
1.36
39735--40079
170
2.0
170
90
1
539
30
15
20
33
1.94
43988--44019
15
2.1
15
94
0
55
43
9
37
9
1.69
44651--44696
23
2.0
23
95
0
83
30
6
13
50
1.66
48296--48333
13
2.8
14
81
18
53
50
5
2
42
1.39
48748--48786
17
2.2
19
86
9
55
61
5
2
30
1.31
48790--48814
8
3.1
8
100
0
50
64
12
0
24
1.27

Tables:   1

The End!