Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167944.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_205, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  51675

Tables:   1   

This is table  1  of  1  ( 42 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4958--4996
19
2.1
19
100
0
78
43
10
30
15
1.80
9109--9148
20
2.0
20
100
0
80
35
10
25
30
1.88
15108--15159
4
14.2
4
76
15
51
71
0
1
26
0.97
15108--15159
7
7.1
8
75
16
51
71
0
1
26
0.97
15247--15278
12
2.6
13
85
14
50
78
0
0
21
0.76
15725--15758
10
3.3
10
88
8
50
79
2
0
17
0.86
16405--16481
35
2.2
36
85
2
102
44
15
12
27
1.83
18841--18883
20
2.2
20
87
4
61
48
0
30
20
1.50
19900--20031
63
2.1
63
92
0
219
34
32
3
29
1.73
21391--21422
16
1.9
17
93
6
57
62
6
21
9
1.47
26253--26287
16
2.2
16
89
0
52
88
5
5
0
0.63
26840--26905
31
2.1
31
100
0
132
50
7
21
21
1.73
27248--27381
36
3.7
36
73
9
94
14
17
17
51
1.77
27475--27676
36
5.6
36
72
8
142
16
19
14
49
1.80
27436--27590
71
2.2
71
81
2
168
16
18
14
51
1.76
27468--27661
71
2.7
72
80
5
214
15
19
14
50
1.79
27475--27670
107
1.8
107
81
4
243
16
19
14
50
1.79
27979--28042
25
2.6
25
82
0
83
73
3
0
23
0.97
27979--28130
6
24.5
6
72
16
80
73
3
2
19
1.11
27979--28053
19
4.1
17
75
16
62
73
2
1
22
1.04
28032--28145
21
5.7
18
69
23
52
77
3
4
14
1.07
28013--28143
42
3.2
40
74
14
122
77
3
3
15
1.06
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28019--28130
21
5.3
22
70
14
76
75
3
3
16
1.08
29926--29969
24
1.9
23
90
9
72
70
0
2
27
0.99
30041--30145
27
3.9
26
80
7
111
51
21
4
21
1.66
30038--30160
27
4.6
26
76
7
104
49
26
4
19
1.68
30038--30152
14
8.5
13
74
5
86
49
25
4
20
1.67
31634--31672
20
1.9
21
89
5
62
58
12
10
17
1.61
34958--34995
18
2.1
18
95
0
67
28
10
5
55
1.56
35430--35514
41
2.1
41
90
0
134
41
11
17
29
1.85
38667--38727
29
2.1
29
84
0
77
21
24
14
39
1.91
44269--44306
20
1.9
19
89
5
58
39
5
7
47
1.55
46069--46212
35
4.1
35
73
12
123
52
13
15
18
1.74
46188--46239
26
2.0
27
92
3
88
51
9
19
19
1.73
46117--46306
98
1.9
97
81
5
222
54
12
15
17
1.72
46225--46323
35
2.8
35
84
9
121
55
13
16
15
1.69
46226--46505
35
7.9
34
70
13
113
52
13
16
17
1.74
46405--46534
35
3.8
34
77
6
111
55
11
14
18
1.69
46474--46626
35
4.4
35
73
8
125
54
11
15
18
1.69
46508--46657
71
2.1
70
77
3
158
56
11
15
17
1.68
46651--46749
36
2.8
36
81
3
103
57
15
11
16
1.65
47268--47324
28
2.0
28
86
0
78
29
12
19
38
1.88

Tables:   1

The End!