Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167954.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_214, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50219

Tables:   1   

This is table  1  of  1  ( 57 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
441--718
152
1.8
152
96
0
511
36
17
15
30
1.91
1182--1226
20
2.2
21
92
4
74
4
24
31
40
1.75
1191--1234
20
2.2
20
83
0
52
11
20
34
34
1.88
1893--1933
16
2.7
15
85
10
57
85
0
0
14
0.60
1970--2028
20
3.0
20
94
0
100
22
28
30
18
1.97
2144--2244
1
101.0
1
78
0
94
4
0
6
88
0.64
2252--2855
42
14.6
42
90
5
851
36
25
16
22
1.94
2252--2855
83
7.3
83
89
5
863
36
25
16
22
1.94
2252--2973
124
5.7
123
88
5
927
36
25
16
22
1.94
2840--2869
14
2.1
14
100
0
60
36
36
26
0
1.57
2798--2910
55
2.0
56
98
1
219
37
29
17
15
1.91
2854--2973
41
2.9
41
94
1
213
37
25
15
21
1.92
4131--4225
8
11.2
9
71
18
62
4
12
1
82
0.87
4133--4214
8
10.1
8
72
20
64
3
10
1
84
0.81
4133--4224
33
2.7
33
79
12
98
4
10
1
83
0.83
4152--4217
1
66.0
1
76
0
60
1
9
1
87
0.66
4133--4214
16
5.1
15
83
12
92
3
10
1
84
0.81
4606--4635
1
30.0
1
100
0
60
0
0
0
100
0.00
7852--8129
152
1.8
152
95
0
502
36
17
15
30
1.91
8169--8195
10
2.7
10
100
0
54
77
7
0
14
0.97
8535--8580
20
2.3
20
92
0
74
10
19
30
39
1.86
8597--8640
20
2.2
20
95
0
79
4
25
31
38
1.76
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8525--8642
62
1.9
63
82
5
150
14
19
30
35
1.92
8604--8648
20
2.2
20
84
0
54
11
22
33
33
1.89
9055--9087
11
2.9
12
86
13
52
78
0
0
21
0.75
9185--9296
44
2.5
44
73
17
106
59
5
0
33
1.26
9307--9347
16
2.7
15
85
10
57
85
0
0
14
0.60
9384--9442
20
3.0
20
94
0
100
22
28
30
18
1.97
12267--12308
14
2.7
15
82
17
50
54
0
2
42
1.13
12437--12478
14
2.7
15
82
17
50
54
0
2
42
1.13
12206--12545
170
2.0
169
95
0
608
45
5
6
42
1.53
12473--12511
20
2.1
18
85
9
51
35
0
0
64
0.94
13072--13122
18
2.7
19
82
14
61
52
0
0
47
1.00
13072--13122
19
2.7
19
85
14
70
52
0
0
47
1.00
13111--13153
8
5.1
8
78
10
50
62
2
0
34
1.08
13111--13170
26
2.4
26
83
5
70
65
3
0
31
1.09
13129--13175
12
3.8
12
81
10
58
65
2
0
31
1.04
13131--13180
26
1.9
26
87
0
73
68
2
0
30
1.01
14683--14749
22
3.0
22
88
2
89
55
1
0
43
1.09
14683--14772
22
4.8
18
75
15
85
55
2
0
42
1.12
14694--14783
8
11.2
8
67
21
55
54
2
0
43
1.12
14682--14784
19
5.5
19
73
15
97
55
1
0
42
1.11
14722--14790
35
1.9
35
88
2
102
57
4
0
37
1.18
14820--14890
19
3.8
20
71
21
64
43
1
0
54
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
14797--14910
16
6.9
16
69
17
63
44
0
0
53
1.12
14887--14950
26
2.5
26
87
5
87
48
1
0
50
1.10
19856--19897
17
2.4
18
80
11
52
33
14
4
47
1.65
22558--22705
73
2.0
75
89
5
230
43
6
9
40
1.64
29301--29331
15
2.1
15
93
0
53
77
0
3
19
0.90
29480--29547
15
4.6
15
75
12
61
61
1
2
33
1.20
29478--29548
30
2.4
28
72
19
72
59
2
2
35
1.27
36838--37149
129
2.4
129
79
7
325
41
5
10
42
1.64
37526--37656
58
2.2
59
80
11
144
35
3
18
42
1.66
37673--37848
55
3.4
51
75
14
128
42
1
14
42
1.52
37700--37850
52
2.9
52
77
15
127
43
0
13
41
1.49
42243--42301
29
2.0
29
81
15
68
38
11
6
42
1.68
45488--45517
2
15.0
2
92
0
51
50
0
3
46
1.18

Tables:   1

The End!