Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167959.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_219, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  48896

Tables:   1   

This is table  1  of  1  ( 31 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4089--4140
8
6.4
8
79
16
54
1
23
0
75
0.91
4102--4147
23
1.9
24
86
8
67
6
21
0
71
1.08
4094--4141
15
3.2
14
78
21
53
2
25
0
72
0.95
5044--5068
9
2.8
9
100
0
50
44
0
0
56
0.99
14681--14715
2
17.5
2
100
0
70
51
0
0
48
1.00
17083--17121
13
2.9
13
92
3
60
69
2
2
25
1.14
17606--17676
28
2.5
29
70
20
69
46
5
0
47
1.26
20923--21723
238
3.4
235
78
8
611
33
10
5
50
1.60
20923--21688
237
3.2
233
78
9
601
34
10
5
49
1.60
21419--21463
21
2.1
22
84
12
58
40
6
0
53
1.27
21411--21472
34
1.9
31
83
9
79
43
4
0
51
1.23
24197--24316
58
2.1
59
87
1
170
40
18
12
29
1.87
24853--24892
20
2.1
20
86
9
57
57
15
10
17
1.64
25736--25771
16
2.2
16
90
9
56
83
0
5
11
0.80
26791--26835
23
1.9
24
86
4
65
20
6
0
73
1.05
31949--32135
46
4.1
47
75
8
152
40
8
12
39
1.73
32030--32148
46
2.6
44
78
6
130
35
8
14
42
1.76
32634--32722
35
2.5
35
81
3
108
39
13
12
34
1.82
33150--33182
9
3.8
9
84
8
50
42
24
0
33
1.55
34094--34135
13
3.2
13
80
12
50
78
0
11
9
0.96
34198--34441
60
4.2
58
78
11
214
36
9
6
48
1.61
34403--34471
30
2.3
31
82
2
95
44
2
4
47
1.37
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
34605--34632
3
9.3
3
100
0
56
67
0
0
32
0.91
37509--37567
11
5.0
11
82
12
55
1
16
0
81
0.78
37510--37555
13
3.6
13
94
2
76
0
13
0
86
0.56
37511--37571
24
2.5
24
84
10
81
1
16
0
81
0.76
38721--38760
20
2.0
20
85
4
55
45
7
10
37
1.66
39906--39983
40
1.9
40
82
10
95
30
7
7
53
1.57
40122--40176
22
2.7
21
78
10
60
29
5
1
63
1.27
44187--44212
2
13.0
2
100
0
52
50
0
0
50
1.00
48569--48621
14
3.7
14
83
14
56
58
0
5
35
1.22

Tables:   1

The End!