Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 19268551
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 68000 characters in sequence are not A, C, G, or T
File 1 of 120
Found at i:2319 original size:26 final size:26
Alignment explanation
Indices: 2283--2333 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
2273 TTGACTTAGG
*
2283 CATATGGAGTTCATTCCCAGGCTAAC
1 CATACGGAGTTCATTCCCAGGCTAAC
*
2309 CATACGGAGTTCATTCCCAGTCTAA
1 CATACGGAGTTCATTCCCAGGCTAA
2334 GATCGGATCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.27, G:0.18, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGGCTAAC
Found at i:2684 original size:741 final size:735
Alignment explanation
Indices: 1118--3734 Score: 3904
Period size: 741 Copynumber: 3.6 Consensus size: 735
1108 ACTGGAGCAA
*
1118 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
1 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAA
* ** **
1183 ATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTACGCATGCCAA-AAAAAT
66 ATGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAAT
* * * * * *
1247 ACAAGGATCACGTCTACCCAGGTTT--AGTCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCG
131 ACAAGGATCACGTCTA-CCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCA
* * *
1310 AACCGCAAAAAGTTCCAAAAATCATGAAAAATAGAAAACGAGTTGTCTTGCCATGAAAC-TCACG
195 AACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
*
1374 TGAAGGCTTTAAGGGACCATTGTATGAA-TTACAAGCCATAAAAATGGCATTGGCACGTAAAAAC
260 TGAAGGC-TTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAA-
* *
1438 TATGAAGATGTGCATAAACCCACCTACCACTCTATCGATCCACGGCTTACGCATCCCGTCTCTCT
323 TATGAAGATGTGCATAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * *
1503 GGCCGGCGTAGTGCCCGCCCGTCCGCACGCTATTTCGTCGATTGACTTAGGCATATGGAGTTCAT
388 GGCCGGCGTAGTGCCCGCCCGCCCGCACTCT-TTTCGTCGGTTGACTTAGGCATATGGAGTTCAT
*
1568 TCCTAGGCTAAGCATACGGAGTTCATTCCCAGTCT-AGATCGGATCGGACCGAGGGTTGCCGGCA
452 TCCCAGGCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTG-CGGCA
* *
1632 CCACATGCTGGGCTCGGGCTTGTGCTGGTGCTGTATTTTTCTTCGCTGGGGCACCA-TC---G--
516 GCACATGTTGGGCTCGGGCTTGTGCTGGTGCTGTATTTTTCTTCGCTGGGGCACCATTCGGAGCA
1691 --TCGGGGAACCTGAAC-GGCGGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTACGCA
581 TCTCGGGGAACCTG-ACTGGCGGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTACGCA
1753 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCA
645 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCA
1818 AGAACTCACACCCTCTTAAAGAGAAT
710 AGAACTCACACCCTCTTAAAGAGAAT
* * *
1844 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGGAATGGGGACATTTTTTTTAA
1 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAA
*
1909 GTGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAAT
66 ATGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAAT
* * *
1974 ACAAGGATCTCGTTTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAAATCCCAA
131 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCAA
* * * *
2039 ACTACAAAAAGTTTCTAAAATCGTGAAAAATAGAAAACGAGTCGTCTTTCCATGAAACTTCACGT
196 ACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* *
2104 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGTCACGCA-AAACTA
261 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAA-TA
* *
2168 TGAAGATGTGCATAAACCCACCTACCACTCTATCGATCCACGGCTTGCGTATCCCGTCTCTCTGG
325 TGAAGATGTGCATAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
2233 CCGGCGTAGTGCCCGCCCGCCCGTACACTCTTTTCGTCGGTTGACTTAGGCATATGGAGTTCATT
390 CCGGCGTAGTGCCCGCCCGCCCG--CACTCTTTTCGTCGGTTGACTTAGGCATATGGAGTTCATT
* * *
2298 CCCAGGCTAACCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACTGAGGGTTGCGGCAGC
453 CCCAGGCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGC
*
2363 ACATGTTGGGCTCGGGCTTGTGCTGGTGCTGTATTTTTCTTCGCTGCGGCACCATCGTCGGAGCA
518 ACATGTTGGGCTCGGGCTTGTGCTGGTGCTGTATTTTTCTTCGCTGGGGCACCAT--TCGGAGCA
*
2428 TCATCGGGGAACCTGACTGGCGGCATTGGGGTTCCGGCGATCGGGGGGGTCGGGGGGGTGTACGC
581 TC-TCGGGGAACCTGACTGGCGGCATTGGGGTTCCGACGATC-GGGGGGTCGGGGGGGTGTACGC
2493 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTC
644 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTC
*
2558 GAGAACTCACACCCTCTTAAAGAGAAT
709 AAGAACTCACACCCTCTTAAAGAGAAT
* * * * *
2585 TTGAGATTTGACAGGTTT-CTTGCCAGTAGCCATTAAAGTGTATGGAATGGGGATATTTTTTTTA
1 TTGAGATTTTACAGGTTTGC-TGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCA
*
2649 AGTGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAA
65 AATGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAA
* * *
2714 TACAAGGATCTCGTTTACCAAGTTTGGGGCCAAAAATCCTTCTGAAAAAATTTTAAAAAATCCCA
130 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCA
* * * *
2779 AACTACAAAAAGTTTCTAAAATCATGAAAAATAGAAAACGAGTTGTCTTTCCATGAAACTTCACG
195 AACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACG
2844 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATA
260 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATA
* * * *
2909 TGAAGATGTGCCTAAATCCACCTACCACCCTATCGATTCACGGCTTGCACATCCCGTCTCTCTGG
325 TGAAGATGTGCATAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGG
* * * * * *
2974 CCGGCATAGTGCCCGCCCGCCCGCCTACTCGTTTCGTCAGTTGGCTTAGGCATACGAAGTTCATT
390 CCGGCGTAGTGCCCGCCCGCCCG-C-ACTCTTTTCGTCGGTTGACTTAGGCATATGGAGTTCATT
* * * * **
3039 CCCTGTCTAAGAATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGTGGTTGC
453 CCCAGGCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGC
* * *** * *
3104 ACATGCTAGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCATTACCGGAGC
518 ACATG-TTGGGCTCGGGCTTGTGCTGGTGCTGTATTTTTCTTCGCTGGGGCACCATT--CGGAGC
* * * * * * * *
3169 ATCGCCGGAGAACCTGTCTGGCGGTATTGGGTTTCCGACGATCAGGGGGTCCGGGGGGTGTGCGC
580 ATC-TCGGGGAACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTACGC
* * *
3234 ACATGATGTGCGATGGGTGCTGTTACTTGGCCTTTATATTGGCCCC-CATCCCTCATCAAACCTC
644 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTC
* *
3298 AAGAACTCACACCCCCTTAAAGAGCAT
709 AAGAACTCACACCCTCTTAAAGAGAAT
* * *
3325 TTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTATTCAA
1 TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAA
* ** * *
3390 ATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGCTCAATTTTTTTGTGCATGCCAATAAAAAT
66 ATGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAAT
* * *
3455 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTTGAAAAAATTTTAAAAAATCCCGA
131 ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCAA
** * *
3520 ACCGGAAAAAGTTTCAAAAATCATGAAAAATAGAAAGCGAGTCGTCTTGCCATGAAACTTCATGT
196 ACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
*
3585 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATAT
261 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATAT
* * *
3650 GAAGATGCGCCTAAACCC-CCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGAC
326 GAAGATGTGCATAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
3714 CGGCGTAGTGCCCGCCCGCCC
391 CGGCGTAGTGCCCGCCCGCCC
3735 ACCTGCCCGC
Statistics
Matches: 1732, Mismatches: 131, Indels: 43
0.91 0.07 0.02
Matches are distributed among these distances:
726 120 0.07
727 20 0.01
728 195 0.11
729 164 0.09
730 26 0.02
732 2 0.00
735 1 0.00
739 65 0.04
740 389 0.22
741 663 0.38
742 87 0.05
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (735 bp):
TTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAA
ATGGTCACAAAATCTTGTACACTTCGAGTTTGAAGCTGAATTTTTTTGTGCATGCCAACAAAAAT
ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCAA
ACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATAT
GAAGATGTGCATAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
CGGCGTAGTGCCCGCCCGCCCGCACTCTTTTCGTCGGTTGACTTAGGCATATGGAGTTCATTCCC
AGGCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACA
TGTTGGGCTCGGGCTTGTGCTGGTGCTGTATTTTTCTTCGCTGGGGCACCATTCGGAGCATCTCG
GGGAACCTGACTGGCGGCATTGGGGTTCCGACGATCGGGGGGTCGGGGGGGTGTACGCACATGAT
GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCAAGAACT
CACACCCTCTTAAAGAGAAT
Found at i:3061 original size:26 final size:26
Alignment explanation
Indices: 3025--3076 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
3015 TGGCTTAGGC
*
3025 ATACGAAGTTCATTCCCTGTCTAAGA
1 ATACGAAGTTCATTCCCAGTCTAAGA
*
3051 ATACGGAGTTCATTCCCAGTCTAAGA
1 ATACGAAGTTCATTCCCAGTCTAAGA
3077 TCGGATCGGA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.23, G:0.17, T:0.29
Consensus pattern (26 bp):
ATACGAAGTTCATTCCCAGTCTAAGA
Found at i:5112 original size:863 final size:876
Alignment explanation
Indices: 3017--5775 Score: 2759
Period size: 863 Copynumber: 3.1 Consensus size: 876
3007 TCGTCAGTTG
* * *
3017 GCTTAGGCATACGAAGTTCATTCCCTGTCTAAGAATACGGAGTTCATTCCCAGTCTAAGATCGGA
1 GCTTATGCATACGGAGTTCATTCCCT-TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * * **
3082 TCGGACCGAGGGTTGTGGTTGCACATGCTAGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTC
65 CCGGACTGAGGGTTGCGGCAGCACATGCT-GGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTC
** * * * * * * *
3147 ACCGGGGCACCATTACCGGAGCATCGCCGGAGAACCTGTCTGGCGGTATTGGGTTTCCGACGATC
129 GTC-GGGCACCATCATCGGAGCATCACCGGAGAACCTGACCGGCGGTATTGGGGTTCCGAAGATC
* *
3212 -AGGGGGTCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGTTACTTGGCCTTTATATTGG
193 GGGGGGGT-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCTTTATATTGG
* *
3276 CCCCC-ATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGG
257 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
*
3340 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTATTCAAATGGTCACAAAATCT
322 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * *
3405 TGCACACTTCGAGTTTTTAGCTCAATTTTTTTGTGCATGCCAATAAAAATACAAGGATCACGTCT
387 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGGCT
* * **
3470 ACCAAGTTTGGGGCCAAAACTCTTTTTGAAAAAATTTTAAAAAATCCCGAACCGGAAAAAGTTTC
452 ACCAAGTTTGGGCCCAAAACTC-TATCCAAAAAATTTT--AAAATCCC-AACCGGAAAAAGTTT-
*
3535 AAAAATCATGAAAAATAGAAAGCGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGAC
512 -AAAATCATGAAAAATAGAAAGAGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGAC
* * *
3600 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGCGCCTAAA
576 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA-GCACAAATATAAAGATGCGCCTAAA
**
3665 CCCCCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGACCGGCGTAGTGCCCGCC
640 -CCCCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGACAAGCGTAGTGCCCGCC
** * * * * * *
3730 CGCCCACCTGCCCGCTCGTTTGGTCGGTTGGCTTAGGCAGACAGAGATCATTCCCAGTCTAAGAT
704 AACCCACCCGCACGATCGTTTCGTCGGTTGGCTTAGGCAGACAGAGATCAATCACAGTCTAAGAT
* * * *
3795 TGGACCAGACCGAGGGTTATGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCGGGCCGATCCCT
769 TGGACCAGACCGAGGGTTACGACAGCAGGATCGATAGCACGCAGAGGAGGACCGGGCCGAT-CCT
* *
3860 ACTTGCGCATCCCGCCACTCTGGCCGGCTGAGCGCCCGCACGCTT
833 A-TCGCGCATCCCGCCACTCTAGCCGGCTGAGCGCCCGCACGCTT
* * *
3905 G-TT-T-CGT--GG-GTTGA----C-T-TAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
1 GCTTATGCATACGGAGTTCATTCCCTTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
* * * *
3958 CGGA-TCGAGGGTTGCGGCAACACATGCTGGGCTCAGGCATGTGCCGGTGCCGCATTTTTCTTCG
66 CGGACT-GAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCG
* * ** *
4022 TCGAGGCACCGTCGTCGGAGCATCACCGGAGAACCTGACCAACGGTATTGGGGTTCCGGCA-ATC
130 TCG-GGCACCATCATCGGAGCATCACCGGAGAACCTGACCGGCGGTATTGGGGTTCC-GAAGATC
* *
4086 GAGGGGCCG-CGGGGGGTGTGCGCACATGATGTGCGATGGGTTCTGGTACTTGGCCTTTATATTG
193 G-GGGG-GGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCTTTATATTG
4150 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
256 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
4215 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
321 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
*
4280 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGGC
386 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGGC
* * * * ** *
4345 TACCAAGTTTGGTCCCCAAACTGC-ATCCAAAATATTTT-AAATCCC-ATCGTTAAATGTTGT-A
451 TACCAAGTTTGGGCCCAAAACT-CTATCCAAAAAATTTTAAAATCCCAACCGGAAAAAGTT-TAA
** * *
4406 AATTGTG-AAAAT-GAAA-AGAGTTGTCTTG-CATG-AACTTC-CGTTGAAGGCCTTAA-GGACC
514 AATCATGAAAAATAGAAAGAGAGTCGTCTTGCCATGAAACTTCATG-TGAAGG-CTTAAGGGACC
* *
4464 -TTGTAT-AA-TTA-AAGCTATTAAGAAAT-GCA-TGGCA-CACAAATATAAAGATGTGCCTAAA
577 ATTGTATGAATTTACAAGCCA-TAA-AAATGGCATTGGCAGCACAAATATAAAGATGCGCCTAAA
** * * ***
4522 -CCCTTGCA-CCTAT-GATCC-TGGCTTGCGCATCCCGTCTCT-TGGTCAATTTTAGTG-CCG-C
640 CCCCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT-GACAAGCGTAGTGCCCGCC
* * * * * * *
4580 AACCCGCCCGTACGATCGTTTCGTCTGTT-GCTTAGGCATAC-G-GGTTAATCGATAGTCT-AGA
704 AACCCACCCGCACGATCGTTTCGTCGGTTGGCTTAGGCAGACAGAGATCAATC-ACAGTCTAAGA
* * *
4641 TTGGACCAGACTGAGGGTTGCGACAGCAGGATCGATAGCATGCAG-GGAGGA-CGCGG-CGAT-C
768 TTGGACCAGACCGAGGGTTACGACAGCAGGATCGATAGCACGCAGAGGAGGACCG-GGCCGATCC
* * ** *
4702 T-TCGGGCCTTGCGACC-C-CTAGCCGGCTGAGCGCCCGTACGCTCATTATGGTGT
832 TATCGCGCATCCCG-CCACTCTAGCCGGCTGAGCGCCCGCACG--C-------T-T
** * *
4755 GACTTATGCATACGGTAGTTCATTCCCTATCTAAGCATATAGAGTTCATT-CCAATCTAAGATTG
1 G-CTTATGCATACGG-AGTTCATTCCCT-TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCG
* * **
4819 GACCAGACTGAGGGATGCGGCAGCATGTGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTT
63 GACCGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTT
* * * * *
4884 CGTCAGGGCACTATCATCGGAGCATCATCGGAAAACCTGACCGGCAGCATTGGGGTTCCGAAGAT
128 CGTC-GGGCACCATCATCGGAGCATCACCGGAGAACCTGACCGGCGGTATTGGGGTTCCGAAGAT
*
4949 CGGGGGGGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
192 CGGGGGGGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCTTTATATTGG
* * * * *
5014 CCCCCTATCCCTCATCAAACCTCGAGAAGTCACACCCTCTTAAGGAGCGTTTCAGATTTTACAGG
257 CCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* * *
5079 TTTGCTGCCAATAGCCATTAAAGTGTATGAAATGGGGACACTTTTTTCAAATGGTCACAAAAACT
322 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * * * **
5144 TCTACACTTCGAGTTTTTAACTGAA-ATTTTT-TGCATGCCAACAAAAATACAAGGATTACTTCT
387 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGGCT
* * * *
5207 ACCGAGTTTGGGGCCAAAACTCCT-TCCAAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTT
452 ACCAAGTTTGGGCCCAAAACT-CTATCC-AAAAAATTTT--AAAATC-CCAACCGGAAAAAGTTT
* * * * *
5271 CCAAAATCGTGAAAAATAGAAA-ACGAGTCATCTTGCCATGGAACTTCACGTGAACGCTTAAGGG
512 --AAAATCATGAAAAATAGAAAGA-GAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGG
* * * * *
5335 ACCATTGTATGAATTTCCAAGCCATAAAAATGGCATTCGCACGCAGAAA-AGTGAAGATGTGCCT
574 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA-GCACAAATA-TAAAGATGCGCCT
* * * *
5399 AAACCCACCTACCACCGTATCGATCCACGGCTTGCACATCCCGTCTCTCTGGC-TGACGTAGTGC
637 AAA-CC-CCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGACAAG-CGTAGTGC
* * ** * * * * * *
5463 TCACCCGCCCACCCG--C--TCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
699 CCGCCAACCCACCCGCACGATCGTTTCGTCGGTTGGCTTAGGCAGACAGAGATCAATCACAGTCT
* * * * * ** * *
5524 AAGATTGGACAAGACTGAGGGTTGCGGCAGCAGGATTGGCAGCACGCAGATGG-GGACCCGACCG
764 AAGATTGGACCAGACCGAGGGTTACGACAGCAGGATCGATAGCACGCAGA-GGAGGACCGGGCCG
* * * * * * * *
5588 ATCCCCAGCTTGCCCATCCCGCCCCTCTGGCCGGTTAAGCACCCGCACGCTCGTTTCGTGGGTT
828 AT-CCTA--TCGCGCATCCCGCCACTCTAGCCGGCTGAGCGCCCGCA----CG---C-----TT
* * *
5652 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAG
1 G-CTTATGCATACGGAGTTCATTCCC-TTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * *
5717 ATCGGACCGAGGGTTGTGGCAGCAAATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
64 ACCGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTT
5776 AAGTTTGGGG
Statistics
Matches: 1542, Mismatches: 225, Indels: 199
0.78 0.11 0.10
Matches are distributed among these distances:
840 21 0.01
841 8 0.01
842 3 0.00
843 2 0.00
845 6 0.00
846 7 0.00
847 47 0.03
848 6 0.00
849 12 0.01
850 23 0.01
851 4 0.00
852 29 0.02
853 6 0.00
854 7 0.00
855 6 0.00
856 2 0.00
857 20 0.01
858 4 0.00
859 10 0.01
860 9 0.01
861 54 0.04
862 23 0.01
863 222 0.14
864 129 0.08
865 33 0.02
866 6 0.00
867 14 0.01
868 6 0.00
869 7 0.00
870 14 0.01
871 6 0.00
872 16 0.01
873 10 0.01
874 95 0.06
875 134 0.09
876 209 0.14
877 10 0.01
878 10 0.01
879 1 0.00
880 20 0.01
882 5 0.00
883 6 0.00
884 16 0.01
885 19 0.01
886 33 0.02
887 51 0.03
888 13 0.01
889 7 0.00
891 1 0.00
893 2 0.00
894 7 0.00
895 16 0.01
896 30 0.02
897 78 0.05
898 3 0.00
899 2 0.00
900 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.26
Consensus pattern (876 bp):
GCTTATGCATACGGAGTTCATTCCCTTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
CGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGT
CGGGCACCATCATCGGAGCATCACCGGAGAACCTGACCGGCGGTATTGGGGTTCCGAAGATCGGG
GGGGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCC
CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGGCTACCA
AGTTTGGGCCCAAAACTCTATCCAAAAAATTTTAAAATCCCAACCGGAAAAAGTTTAAAATCATG
AAAAATAGAAAGAGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGA
ATTTACAAGCCATAAAAATGGCATTGGCAGCACAAATATAAAGATGCGCCTAAACCCCTACCACC
CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGACAAGCGTAGTGCCCGCCAACCCACCCGCA
CGATCGTTTCGTCGGTTGGCTTAGGCAGACAGAGATCAATCACAGTCTAAGATTGGACCAGACCG
AGGGTTACGACAGCAGGATCGATAGCACGCAGAGGAGGACCGGGCCGATCCTATCGCGCATCCCG
CCACTCTAGCCGGCTGAGCGCCCGCACGCTT
Found at i:5695 original size:26 final size:26
Alignment explanation
Indices: 5659--5711 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
5649 GTTGACTTAG
5659 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
5685 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
5711 G
1 G
5712 ATCAGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6225 original size:211 final size:208
Alignment explanation
Indices: 5861--6283 Score: 677
Period size: 211 Copynumber: 2.0 Consensus size: 208
5851 AATAGAAGAC
5861 GAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
1 GAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
5926 AAAACTGGTATTGGCACGTAGAAATATGACGATGTGCCTAAACCCACCTACCACCCAATCGATCC
66 AAAAATGGTATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCC
** * * * *
5991 ATGGGTTGCGCATCCCGTCTCTCTGG-TGGCGTAGTGCCCGCCCACCCGCCCACTCATTTCATCG
131 ATGACTTACACATCCCGTCTCTCTGGCCGACGTAGTGCCCG----CCCGCCCACTCATTTCATCG
6055 GTTGGCTTAGGCATACG
192 GTTGGCTTAGGCATACG
*
6072 GAGTCGTCTTGCCATGAAAGTTCAGGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
1 GAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
**
6137 AAAAATGGTATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCGTATCGATCC
66 AAAAATGGTATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCC
* * *
6202 ATGACTTACACATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCGCGCTCATTTCGTCGGTTG
131 ATGACTTACACATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCACTCATTTCATCGGTTG
6267 GCTTAGGCATACG
196 GCTTAGGCATACG
6280 GAGT
1 GAGT
6284 TCATTCCCAG
Statistics
Matches: 197, Mismatches: 14, Indels: 5
0.91 0.06 0.02
Matches are distributed among these distances:
208 38 0.19
211 147 0.75
212 12 0.06
ACGTcount: A:0.25, C:0.27, G:0.24, T:0.25
Consensus pattern (208 bp):
GAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
AAAAATGGTATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCC
ATGACTTACACATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCACTCATTTCATCGGTTG
GCTTAGGCATACG
Found at i:6468 original size:26 final size:26
Alignment explanation
Indices: 6432--6484 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6422 GTTGACTTAG
6432 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6458 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6484 G
1 G
6485 AGCGGCCCAA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:7360 original size:26 final size:25
Alignment explanation
Indices: 7323--7374 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 25
7313 GTTGACTTAG
7323 GCATACGAGTTCATTCCCAGTCTAA
1 GCATACGAGTTCATTCCCAGTCTAA
7348 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATAC-GAGTTCATTCCCAGTCTAA
7374 G
1 G
7375 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 6 0.23
26 20 0.77
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (25 bp):
GCATACGAGTTCATTCCCAGTCTAA
Found at i:7794 original size:890 final size:893
Alignment explanation
Indices: 6072--9889 Score: 5223
Period size: 903 Copynumber: 4.3 Consensus size: 893
6062 TAGGCATACG
* *
6072 GAGTCGTCTTGCCATGAAAGTTCAGGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
1 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
6137 AAAAATGGTATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCGTATCGATCC
66 AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * *
6202 ATGACTTACACATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCG--CG--CGCTCATTTCGTCG
131 ACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCATTTCGTCG
* * *
6263 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGA-TCGAGGGTTACGGCAG
196 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACT-GAGGGTTGCGACAG
* * * * * *
6327 TAGGATTGGCAGCACGCATATGGGGACTCGACCGATCCCCGACTTACGCATCCCGCCCCTCTGGC
260 TAGGATCGACAGCACGCAGAGGGGGACTCGGCCGATCCCCGACTT--GCAT--CACCCCTCTGGC
* * *
6392 CGGCTGAGCGACCACACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
321 CGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * * * *
6457 AGCATACGGAGTTCATTCCCAGTCTAAGAGCGGCCCAAACCGAGGGTTGTGGCAGCACATGTTGG
386 AGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGG
* * *
6522 GCTCGGGCATGTGCTGGTGCCACCTTTTTCTTCGTCGGGGCACCATCGTTGGAGCATCATCGGAG
451 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCATCGGAG
* * ** *
6587 ATCCTGACCGGCGGCATTAGGGTTCCGACAATCGAGGAAGTCGGGGGGTGTGCGCACATGATGTG
516 AACCTGACCGGCGGCATTGGGGTTCCGACAATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTG
* * * * * *
6652 CAATGGGTACTGGTACTTGGCCCTTATATTCG-CCCCTATCCCTTATCAAACCTTGAGAACTCAT
580 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
6716 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
645 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
6781 GGGGAGACTTTTTTCAATTGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTG
710 GGGGACA-TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTG
6846 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG-AAAA
774 TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* *
6910 ACTTTAAAAAATCTCGAACAGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
839 ATTTTAAAAAATCTCGAACAGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
* *
6965 GAGTCGTCTTGCCATGAAAGTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACTAGCCAT
1 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* *
7030 AAAAATGGTATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCC
66 AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* ** * *
7095 ACGGCTTGCGCATCCCGTCTCTCTGG-CGGCGTAGTGCCCGCCTACCTGCCCACTCATTTCGTCG
131 ACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCATTTCGTCG
* * * *
7159 GTTGGCTTAGGTATACGGAGTTCATTCCCAATCAAAGATCAAACCGGACTGAGGGTTGCGACAGC
196 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGCGACAG-
* * * * *
7224 T-GGATCGATAGCATGCAGAGGGGGACTCGGCCAATCCCCGACTTGCGT-ATCCCTCTGGCCGGC
260 TAGGATCGACAGCACGCAGAGGGGGACTCGGCCGATCCCCGACTTGCATCACCCCTCTGGCCGGC
* *
7287 TGAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATAC-GAGTTCATTCCCAGTCTAAGCA
325 TGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * *
7351 TACAGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTGCGATAGCACATGCTGGGTTC
390 TACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTC
* * * *
7416 AGGCATGTGCTGGTGTCGTATTTTTCTTCG-CTGGGGCACCATCGTCAGAGCATCAAT-GGAGAA
455 GGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATC-ATCGGAGAA
* *
7479 CCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGCGCCAGGGGGGTGTGCGCACATGATGTGC-
518 CCTGACCGGCGGCATTGGGGTTCCGACAATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCG
*
7543 AGTGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
582 A-TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
7608 CCCCCTTAAA-AGCATCTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
646 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
7672 GGGACATTTTATTCAAATGATCACAAAATCTTGTACAC-TCCAGGTTTTTAGCTGAACTT-TTTT
711 GGGACATTTT-TTCAAATGGTCACAAAATCTTGTACACTTCGA-GTTTTTAGCTGAA-TTGTTTT
* **
7735 GTGCATGCCAAAATAAAA-ACAGGGATCGTGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
773 GTGCATGCCAAAA-AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* *
7799 AAATTTTAAAAAATCCCGAACAGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAAC
837 AAATTTTAAAAAATCTCGAACAGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
*
7856 AAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
1 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * *
7921 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTACCGATCC
66 AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* *
7986 ACGGCTTGCGCATCCCGTCTCTCTGGCAGGCGTAGTGCCCGCCCGCTCGCCCGCCCGCTCATTTC
131 ACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG--C-C-CGCCCGCCCGCTCATTTC
* * *
8051 GTCGGTTGGCTTAGGCATACGGAGTTCACTCCCAGTCTAAGATCAAACCAGACCGAGGGTTGCGG
192 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGCGA
* * * * * * * * *
8116 TAGCAAGATCAACAGCACGTAGAGGGGGGCCCGGTCGATCCCCGGCTTGTGCATCCCACCCCTCT
257 CAGTAGGATCGACAGCACGCAGAGGGGGACTCGGCCGATCCCCGAC-T-TGCAT--CACCCCTCT
* * *
8181 GGCCAGCTAAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCAAGT
318 GGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * * *
8246 CTAAGCATACGGAGTTAATTCCTAGTCTAAGATCGAATCAGACCGAGGGTTGCGATAGCACTTAC
383 CTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGC
* * *** * *
8311 AGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTTACCGGGGGACCATCGTCGGAGCATCATCA
448 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCATCG
* * * * **
8376 GAGAACCTGACCTGCGACATTGGGGTTTCGGA-TATCGGGGGGCCGATGGGTGTGCGCACATGAT
513 GAGAACCTGACCGGCGGCATTGGGG-TTCCGACAATCGGGGGGCCGGGGGGTGTGCGCACATGAT
* * * ** ** *
8440 GTGCGATGGGTGCTGGAACTTGGCCCATATAATATCCCCCTATCCCTCATCAAAGGTCGAGGGAC
577 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GAAC
* * * * *
8505 TCACACGCCCTTAAAGAGCATTTGAGATTTTACAGGCTTGCTGCTAGTAGCCATTAAAGTGTTTA
641 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * *
8570 AAATGGGGATAATTTTTTAAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTTGCTGAATTGT
706 AAATGGGGA-CATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGT
** **
8635 TTTGTGCATGCCAAAAAAAATACAAATATCACGTCTACCAAGTTTTTGGCCAAAACTCCTTCCGA
770 TTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
*
8700 AAAAATTTTAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
835 AAAAATTTTAAAAAATCTC-GAACAGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
8759 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
1 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * * *
8824 AAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACACACCTACCATCCTATCGATCC
66 AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * *
8889 ACGGCTTTCACATCCCGTCTCTCTGGCCGGCGTAGCGCCCGGTCGCCCGCCCGCCCGCTCATTTC
131 ACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTG-CC---CGCCCGCCCGCCCGCTCATTTC
* * * *
8954 GTCAGTTAGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCAGACC---C--A-GGTTGC-A
192 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGCGA
* * * * * *
9012 GTAGTAGGATCGACAGCACGCAGAAGGGGAC-CTAGCCGATCCCTGGCTTGTACATCCCGCCCCT
257 -CAGTAGGATCGACAGCACGCAGAGGGGGACTC-GGCCGATCCCCGACTTG--CAT--CACCCCT
* * *
9076 CTGGCCGGTTGAGCGCCCGCAAGCTCGTTTCATGGGTTGACTTAGGCATAC-GAGTTCATTCTCA
316 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * *
9140 GTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGGCAGCACAT
381 GTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACAT
* * *
9205 GCTGGGCTCGGACATGTGCTGGTGCCGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGCATCAC
446 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCAT
* *
9270 CGGAGAACTTGACCGGCGGCATTGGGGTTCCGGCAATCGGGGGGGCCTGGGGGGTGTGCGCACAT
511 CGGAGAACCTGACCGGCGGCATTGGGGTTCCGACAATC-GGGGGGCC-GGGGGGTGTGCGCACAT
* *
9335 GATGTGCGATGGGTTCTGGTACTTGGCCATTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
574 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
*
9400 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTC
639 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
9465 TGAAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
704 TG-AAATGGGGACA-TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
*
9530 T-TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
767 TGTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * * * *
9594 TGAAAAAATTTTAAAAAAGCTAGAACCA-TAAAAAGTTTCAAAAATCATGAAAAATATATAAAAT
832 CGAAAAAATTTTAAAAAATCTCGAA-CAGTAAAAAGTTTCAAAAATCGTG-AAAA-ATAGAAAAC
9658 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
1 GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
* * * *
9723 AAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCAACTACGACCATATCGATCC
66 AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * *
9788 ACGCCTTACGCATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTC
131 ACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG--C-C-CGCTCATTTC
* *
9853 ATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTC
192 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
9890 GAAGCATACA
Statistics
Matches: 2587, Mismatches: 278, Indels: 114
0.87 0.09 0.04
Matches are distributed among these distances:
889 13 0.01
890 360 0.14
891 304 0.12
892 28 0.01
893 148 0.06
894 5 0.00
895 17 0.01
896 357 0.14
897 273 0.11
898 139 0.05
899 202 0.08
900 1 0.00
901 122 0.05
902 179 0.07
903 425 0.16
904 11 0.00
905 1 0.00
907 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (893 bp):
GAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT
AAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
ACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCATTTCGTCG
GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAACCAGACTGAGGGTTGCGACAGT
AGGATCGACAGCACGCAGAGGGGGACTCGGCCGATCCCCGACTTGCATCACCCCTCTGGCCGGCT
GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
ACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCG
GGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCATCGGAGAACCT
GACCGGCGGCATTGGGGTTCCGACAATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGG
GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
ATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGC
CAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAA
AAAATCTCGAACAGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
Found at i:8254 original size:26 final size:26
Alignment explanation
Indices: 8224--8276 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
8214 GTTGACTTAG
*
8224 GCATACGGAGTTCATTCCAAGTCTAA
1 GCATACGGAGTTAATTCCAAGTCTAA
*
8250 GCATACGGAGTTAATTCCTAGTCTAA
1 GCATACGGAGTTAATTCCAAGTCTAA
8276 G
1 G
8277 ATCGAATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTAATTCCAAGTCTAA
Found at i:9156 original size:26 final size:25
Alignment explanation
Indices: 9121--9172 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
9111 GTTGACTTAG
*
9121 GCATACGAGTTCATTCTCAGTCTAA
1 GCATACGAGTTCATTCCCAGTCTAA
9146 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATAC-GAGTTCATTCCCAGTCTAA
9172 G
1 G
9173 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 6 0.24
26 19 0.76
ACGTcount: A:0.29, C:0.25, G:0.17, T:0.29
Consensus pattern (25 bp):
GCATACGAGTTCATTCCCAGTCTAA
Found at i:10183 original size:751 final size:744
Alignment explanation
Indices: 9089--10638 Score: 2331
Period size: 751 Copynumber: 2.1 Consensus size: 744
9079 GCCGGTTGAG
** * * * *
9089 CGCCCGCAAGCTCGTTTCATGGGTTGACTTAGGCATACGAGTTCATTCTCAGTCTAAGCATACAG
1 CGCCCGCTCGCTCGTTTCATCGGTTGGCTTAGGCATACGAGTTCATTCCCAGTCGAAGCATACAG
* * *
9154 AGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCGGACA
66 AGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTCGGACA
* ** ** * *
9219 TGTGCTGGTGCCGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGCATCACCGGAGAACTTGACC
131 TATGCTGGTGCCGCATTTTTCTTCCCCGAGGCACCATCACCGGAGCATCACCGGAGAACCTGACA
*
9284 GGCGGCATTGGGGTTCCGGCAATCGGGGGGGCCTGGGGGGTGTGCGCACATGATGTGCGATGGGT
196 GGCGGCATTGGGGTTCCGGCAATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGT
* * *
9349 TCTGGTACTTGGCCATTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
261 GCTGGTACTTCGCCATTATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTCACACCCCCTT
*
9414 AAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAAATGGGGACA
326 AAAGAGCATTTCAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTG-AAATGGGGACA
* * *
9479 TTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTGTGCATGC
390 TTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTGCAAGC
9543 CAACAAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CC-TTCTGAAAAAATTT
455 CAA-AAAAATTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-TGCCTTTC-GAAAAAATTT
* *
9605 TAAAAAA-GCTAGAACCATAAAAAGTTTCAAAAATCATGAAAAATATATAAAATGAGTCGTCTTG
517 TAAAAAATCCT-GAACCATAAAAAGTTTCAAAAATCATG-AAAA-ATAGAAAATGAGTCGTCTTG
** *
9669 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
579 CCACCAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGGCAT
9734 TGGCACATAGAAATATGAAGATGTGCCTAAACCCAACTACGACCATATCGATCCACGCCTTACGC
644 TGGCACATAGAAATATGAAGATGTGCCTAAACCCAACTACGACCATATCGATCCACGCCTTACGC
9799 ATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCCGCC
709 ATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCCGCC
9835 CGCCCGCTCGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCGAAGCATACA
1 CGCCCGCTCGCTCGTTTCATCGGTTGGCTTAGGCATAC-GAGTTCATTCCCAGTCGAAGCATACA
*
9900 TAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTC-GAC
65 GAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTCGGAC
* * *
9964 ATATGCTGGTGCCGTATTTTTCTTCCCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGAT
130 ATATGCTGGTGCCGCATTTTTCTTCCCCGAGGCACCATCACCGGAGCATCACCGGAGAACCTGAC
** **
10029 AGGCGGCATTGGGGTTCCGGTGATCAGGGGCGTCGGGGGGGGGGGGTGTGCGCACATGATGTGCG
195 AGGCGGCATTGGGGTTCCGGCAATC--GGG-G--GGGCCGGGGGGGTGTGCGCACATGATGTGCG
* * * * *
10094 ATGGGTGCTGGTACTTCGCCCTTATATTGGCCCCGTATCCCTCATCGAACGTCGAAAACTCACGC
255 ATGGGTGCTGGTACTTCGCCATTATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTCACAC
* *
10159 CCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGG
320 CCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGG
10224 GGACATTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTG
385 GGACATTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTG
10289 CAAGCCAAAAAAATTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATGCCTTTCGAAAAAAT
450 CAAGCCAAAAAAATTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATGCCTTTCGAAAAAAT
* ** * *
10354 TTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAGAATGAGTCGTGTTGC
515 TTTAAAAAATCCTGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGC
* *
10419 CACCAAACTTCAGGTGAAGGCTTAAGGGACAATTGTATGTATTTACAAGCCATAAAAATGGCATT
580 CACCAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGGCATT
** * * * * *
10484 GGCATGTAGAAATATGAAGATGTGCCTAAACCCAGCTACTACCCTATCGATCCACGGCTTGCGCA
645 GGCACATAGAAATATGAAGATGTGCCTAAACCCAACTACGACCATATCGATCCACGCCTTACGCA
* * * *
10549 TCCCGTCTCTCTGGGCGGCGTAGTGTCCTCCCGCC
710 TCCCGTCTCTCTGGCCAGCGTAGTGCCCGCCCGCC
* * *
10584 CGCCCG-TCTGCTCATTTCGTTGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTC
1 CGCCCGCTC-GCTCGTTTCATCGGTTGGCTTAGGCATACG-AGTTCATTCCCAGTC
10639 TAAGATCAAA
Statistics
Matches: 726, Mismatches: 65, Indels: 23
0.89 0.08 0.03
Matches are distributed among these distances:
746 115 0.16
747 81 0.11
748 6 0.01
749 215 0.30
750 69 0.10
751 235 0.32
752 5 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (744 bp):
CGCCCGCTCGCTCGTTTCATCGGTTGGCTTAGGCATACGAGTTCATTCCCAGTCGAAGCATACAG
AGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTCGGACA
TATGCTGGTGCCGCATTTTTCTTCCCCGAGGCACCATCACCGGAGCATCACCGGAGAACCTGACA
GGCGGCATTGGGGTTCCGGCAATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGT
GCTGGTACTTCGCCATTATATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTCACACCCCCTT
AAAGAGCATTTCAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACAT
TTTTTTCAAATGCTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTGCAAGCC
AAAAAAATTACAAGGATCACGTCTACCAAGTTTGGGGCCAAAATGCCTTTCGAAAAAATTTTAAA
AAATCCTGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCACCAA
ACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACA
TAGAAATATGAAGATGTGCCTAAACCCAACTACGACCATATCGATCCACGCCTTACGCATCCCGT
CTCTCTGGCCAGCGTAGTGCCCGCCCGCC
Found at i:11665 original size:26 final size:26
Alignment explanation
Indices: 11625--11677 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
11615 GTTGACTTAG
*
11625 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGCTCATTCCCAGTCTAA
* *
11651 GCATACGGAGCTCATTCCCATTCTAA
1 GCATACGAAGCTCATTCCCAGTCTAA
11677 G
1 G
11678 ATTGGATGGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.28, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGCTCATTCCCAGTCTAA
Found at i:12080 original size:889 final size:887
Alignment explanation
Indices: 9835--15933 Score: 7758
Period size: 889 Copynumber: 6.9 Consensus size: 887
9825 CCCGCCCGCC
* * * * * * *
9835 CGCCCGCTCGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCGAAGCATACA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * * * * *
9900 TAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTC-GAC
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
* ** * *
9964 ATATGCTGGTGCCGTATTTTTCTTCCCCGGGGCACCATCACCGGAGCATCACCGGAGAACCTGAT
131 ATGTGCTGGTG-CGTATTTTTCTTCGTCGGGGCACCAT--CCGGAGCATCGCCGGAGAACCTGAC
* ** **
10029 AGGCGGCATTGGGGTTCCGGTGATCAGGGGCGTCGGGGGGGGGGGGTGTGCGCACATGATGTGCG
193 CGGCGGCATTGGGGTTCCGACGATC--GGG-G--GGGCCGGGGGGGTGTGCGCACATGATGTGCG
* * * * * *
10094 ATGGGTGCTGGTACTTCGCCCTTATATTGGCCCCGTATCCCTCATCGAACGTCGAAAACTCACGC
253 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
10159 CCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGG
318 CCCC-TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
10224 GGACATTTTTTTCAAATGCTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTGTG
382 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* *
10289 CAAGCCAA-AAAAATTACAAGGATCACGTCTACCAAGTTTGGGGCC-AAAATGCCTTTCGAAAAA
447 CATGCCAACAAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAT-CCTTCCGAAAAA
* * * * * *
10352 ATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAGAATGAGTCGTGTT
510 ATTTTAAAAAATCCCGAACCAT-AAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* * * *
10417 GCCACCAAACTTCAGGTGAAGGCTTAAGGGACAATTGTATGTATTTACAAGCCATAAAAATGGCA
574 GCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * *
10482 TTGGCATGTAGAAATATGAAGATGTGCCTAAACCCAGCTACTACCCTATCGATCCACGGCTTGCG
639 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
10547 CATCCCGTCTCTCTGGGCGGCGTAGTGTCCTCCCGCCCGCCCGTCTGCTCATTTCGTTGGTTGGC
704 CATCCCGTCTCTCTGGCCGGCGTAGTG----CCCGCCCG--C-TC-G----TTTCGTCGGTTGGC
* * * * *
10612 TTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAAACTAGACCGAGGGTTGCAGCAGCAGGATC
757 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCAGGATC
* * * * ** *
10677 GGCAGCACACAGAGGGGGACCTGGTCGATCGTCGGCTTGCGCATCCCATCCCTCT-GCTCGGCTA
822 GGCAGCACGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGC-CGGCTG
10741 AG
886 AG
* * * *
10743 CGCCCGCACGCTCATTTTGTGGGTTGACTTAGGCATACAGAGTTCATT--C--TC--AGCCTA--
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
10800 -AG---A-T--C-G-----GATC-G----GACCGAGGGTTACCGG-AGCACATGCTGGGCTCGGG
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTA-CGGCAGCACATGCTGGGCTCGGG
* ** *
10846 CATGTGCTGGTGTCGCATTTTTCTTCACCGAGGCACCAT-C---G--T---CGGAGAACCTGACC
130 CATGTGCTGGTG-CGTATTTTTCTTCGTCGGGGCACCATCCGGAGCATCGCCGGAGAACCTGACC
* *
10902 GGCGGCATTGGGG-TCCGATGATC-GGGGGGCC-GGGGGGTGTGCGCAAATGATGTGCGATGGGT
194 GGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGT
** * **
10964 GCTGGTACTTGGCATTTATATTGGCCCCCTATCCCTCATCAAACTTCGAG-ACTCATGCCCCCTT
259 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC-T
* *
11028 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGTGGATAC
323 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
11093 TTTTTTCAAATGATCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
388 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
** *
11158 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGTGAAAAATCCTTCCGAAAAAATTTTATA
453 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAA
* *
11223 AAATCCCGAACCATAAAAGTTTCAAAAATCGTGAAAAATAGAGAACGAGTCGTCTTGCCATGAAA
518 AAATCCCGAACCATAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCACGAAA
* * *
11288 CTTCACGTTAAGGCTTAAGGCACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCATGC
583 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * *
11353 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATACACGACTTCCGCATCCCGTC
648 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * * *
11418 TCTCTAGCCGGTGTAGTGCCCGCCTGCTCGTTTCGTCAGTTGGCTTAGGCATACAGAGTTCATTC
713 TCTCTGGCCGGCGTAGTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * * *
11483 CCAATCTAAGATCAGACCAGATCGAGGGTTACGGCAACAGGATCGGTAGCACGTAGAGGGGGACC
778 CCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACC
* * *
11548 CGACCGATCCTCGACTTGCGCATCCCACCCCTCTGGCCGGCTGAG
843 CGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * * *
11593 CACCCGCACGCCCGTTTTGGGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * * *** * * *
11658 GAGCTCATTCCCATTCTAAGATTGGATGGGA-TGAGGGTTACGGCAGCACATGCTGGGCTTGGTC
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
*
11722 ATGTGCTGGTGCGGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCGCCGGAGAAACTGAC
131 ATGTGCTGGTGC-GTATTTTTCTTCGTCGGGGCACCAT--CCGGAGCATCGCCGGAGAACCTGAC
* * *
11787 CGACGGCATT-AGGTTCCGACAATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
193 CGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
*
11851 TGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCGAGAACTCACACCGCCC
258 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC-CCC
*
11916 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTGAAGTGTCTGAAATGGGGACA
322 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * * *
11981 TTTTTTTCAAATGCTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATCTTTTTGTGCATGC
387 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* * * * * * *
12046 AAACAAAATTACAAGTATCACATCTACAAAGTTTGGGGCC-AAACTCCTTTCGAAAAAATTTTAA
452 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAA
* * * ** * * *
12110 AAAATCTCGAACCGTAAAAAGTTTCGAAAATTATGAAAAATAGAAAATGAGTCGTGTCGCCACGA
517 AAAATCCCGAACCAT-AAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCACGA
* * *
12175 AACTTCAGGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGGGATTGGCAT
581 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
*
12240 GCAGAAATATGAAGATGTGCCTAAACCCAGCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
646 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* * * * *
12305 TCTCTCTAGTCGGCGTAGTGCCCACCCGCCCGTCCGTCCGCTCATTTTGTTGGCTGGCTTAGGCA
711 TCTCTCTGGCCGGCGTAGTG----CCCGCCCG--C-T-CG----TTTCGTCGGTTGGCTTAGGCA
* * *
12370 TACGGAGTTCATTCCCATTCTAAGATCAGACCGGATCGAGGGTTGCGGCAACAGGATCGGCAGCA
764 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCAGGATCGGCAGCA
** * ** * *
12435 CATAGAGGGGGACCTGATCGATCAC-CGGCTTGTGCATCCCGCCCCTCT-GCTCGGCTGAA
829 CGCAGAGGGGGACCCGGCCGATC-CTCGGCTTGCGCATCCCGCCCCTCTGGC-CGGCTGAG
* *
12494 CGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATT-CCAGTCTAAGCATATG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * *
12558 GAGTTCATTCTCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGC
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
* ** *
12623 ATGTGCTGGTGCTGCATTTTTCTTCACCGAGGCACCAT-C---G--T---CGGAGAACCTGACCG
131 ATGTGCTGGTGC-GTATTTTTCTTCGTCGGGGCACCATCCGGAGCATCGCCGGAGAACCTGACCG
* ** * * * *
12679 ACTACATTGGGG-TCCGGCGATCGGAGGGGCC-GGGGGGTGTGTGCACATGATGTACGATGGGTG
195 GCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
** * * *
12742 CTGGTACTTGGCATTTATATTGGCCCCCTATCCATCATCAAACTTCGAGAACTCACACCCCTTTA
260 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC-CTA
*
12807 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTGTGAAATGGGGACACT
324 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
*
12872 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCACGCCA
389 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* *
12937 ACAAAAATACAAGGATCACGTCTACAAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTATAA
454 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAA
* * * * * *
13002 AATCTCGAACCACAAAAAGTTTCAAAAATTGTGAAAAATAGAGAACGAGTCGACTTGCCATGAAA
519 AATCCCGAACCA-TAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCACGAAA
* * *
13067 CTTCACGTGAAGGCTTAAGGCACCATTGTATTAATTTACAAGCCATAAAAATTGCATTGGCATGC
583 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * *
13132 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATACACGGCTTTCACATCCCGTC
648 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
** * *
13197 TCTCTGGCCGTTGTAGTGCCCGCCCGCTCGTTTTGTCGGTTGCCTTAGGCATACGGAGTTCATTC
713 TCTCTGGCCGGCGTAGTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* * * * * *
13262 CCAGTCTAAGATCAGACCGGACCAAGGGTTGTGGCAGCAGCATCGACAGCACGCAGAGGGGGA-C
778 CCAGTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACC
* *
13326 CGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAG
843 CGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* *
13371 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTTCCAGTCTAAGCATACA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* *
13436 GAGTTCATTCCAAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGTTGGGCTCGGGC
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
* *
13501 ATGTGCTGGTGTCGTATTTTTCTTCGTCGGGG---CA--C----CATCGCCAGAGAACCTGACTG
131 ATGTGCTGGTG-CGTATTTTTCTTCGTCGGGGCACCATCCGGAGCATCGCCGGAGAACCTGACCG
* *
13557 GCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGAGATGGATG
195 GCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
*
13622 CTGGTACTTGGCCCTTATATCGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCACCCTA
260 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC-CCCTA
* * *
13687 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTGAAGTGTCTAAAATGGGGACATT
324 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * *
13752 TTTTTCAAATGGACACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTATGCATGCCA
389 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * * * * *
13817 ACAAAAACACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTGCAAAAAAATTTAAAAA
454 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAA
* * * *
13882 AATCCCGAACCACAAAAGGATTT-GAAAATCGTGAAAAATAGAAAAGGAGTCATCTTGCCACGAA
519 AATCCCGAACCATAAAA-G-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCACGAA
* *
13946 ACTTCACATGAAGGCTTAATGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
582 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
14011 CACAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
647 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* *
14076 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGTTTCGTCGGTTGGCTTAAGCATACGGAGTTC
712 CTCTCTGGCCGGCGTAGTGCCCGCCCG--C-TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
* * * *
14141 ATTCCCAGTTTAAGATCAGACCAGA-CTGAGGGTTGTGGTAGCAGGATCGGCAGCACGTAGAGGG
774 ATTCCCAGTCTAAGATCAGACCAGATC-GAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGG
* *
14205 GGA-CCGGCCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAG
838 GGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * *
14254 CGCCCGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGCTCATTTCCAGTCTAAGCATACG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * * *
14319 GAGTTCATTCCCAGTCTAAGATCAGACCAGATCGAGGGTTACCGCAGCACATGTTGGGCTCGGGC
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
* * * * * *
14384 AGGTGCTGGTGTCGCATTTTTC-T--T-------CC--CCGGAGCATCGTCGAAAAACCTGACTG
131 ATGTGCTGGTG-CGTATTTTTCTTCGTCGGGGCACCATCCGGAGCATCGCCGGAGAACCTGACCG
* * *
14437 GCGGCATTGGGGTTTCGACGATC-GGGGGGCCGGAGGGGGGTGTGCGCACATGTTGTGTGATGGG
195 GCGGCATTGGGGTTCCGACGATCGGGGGGGCC-G-GGGGGGTGTGCGCACATGATGTGCGATGGG
* *
14501 TGCTGGTATTTGGCCCTTATATTGGCCCCCTCTCCCTCATCAAACCTCGAGAACTCACACCCCCT
258 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC-
*
14566 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAGGTGT-TCGAAATGGGGAC
322 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT-GAAATGGGGAC
* *
14630 ACTTTTTTCAAATAGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATG
386 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
*
14695 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTACCGAAAAAATTTTA
451 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTA
* * *
14760 AAAAATCCCAAACCGCA-AAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
516 AAAAATCCCGAA-C-CATAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAC
* *
14824 GAAACTTCACGTGAAGGCTTAAGGGACCATTTTCTGAATTTACAAGCCATAAAAATGGCATTGGC
579 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
* * * * *
14889 CTGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCCATCGGTCCACGGCTTGCGCAACC
644 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* ** * * **
14954 CGTCTCTCTGGCCGACACAGTGCCCGCCCGCCCGCTTGTTTCGTCAGTTGTTTTAGGCATACGGA
709 CGTCTCTCTGGCCGGCGTAGT----GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * * * * *
15019 GTTCATTCCCAATCGAAGATCAGACC-GAATTGAGGGTTGTGGTAGCAGGATCGACAGCATGCAG
770 GTTCATTCCCAGTCTAAGATCAGACCAG-ATCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* * * *
15083 AGGGGGACCCGGTCGATCCTCGGCTTGCGCATCTCGCCCCTTTGGCCGACTGAG
834 AGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* * * * * *
15137 CGCCTGCATGCTCCTTTCATGGGTTGACTTAGGCATATGGAGTTCATTCCCAATCTAAGCATACG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
* * ** *
15202 GATTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGACAGCACATGCTATGCTCAGGC
66 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
** * *
15267 ATGCACTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACTGGAGAACCTGAC
131 ATGTGCTGGTG-CGTATTTTTCTTCGTCGGGGCACCATC--CGGAGCATCGCCGGAGAACCTGAC
* * * ** * * *
15332 CGACGGCATTGGGGTTCCAACGATCGGGGGGGCTGGACGGGTGTTCGCACATGATGTGCAATGCG
193 CGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGG
* *
15397 TGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTCACACCCCTT
258 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCC-C
15462 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
322 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * *
15527 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGGGTTTTTAGCTGAA-TATTTTGTGCATGC
387 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* *
15591 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAAAAATTTTAA
452 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAA
* * * *
15656 AAAATCTCGAACC-GAAAAGTTTCAAAAATCGTGAAAATTAGAAAACGAGTTGTCTTGCCACGAA
517 AAAATCCCGAACCATAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCACGAA
15720 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
582 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
15785 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACGGCTTGCGCATCCCGT
647 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * * *
15850 CTCTCTAGTCGGCGTAGTGCCCGCCCGTCCGCCCCGTTCGTTTCATCGGTTGGCTTAGGCATACA
712 CTCTCTGGCCGGCGTAGTGCCCG--C--CCG---C--TCGTTTCGTCGGTTGGCTTAGGCATACG
15915 GAGTTCATTCCC-GTCTAAG
768 GAGTTCATTCCCAGTCTAAG
15934 CATGCGGAAT
Statistics
Matches: 4566, Mismatches: 491, Indels: 279
0.86 0.09 0.05
Matches are distributed among these distances:
850 163 0.04
851 2 0.00
852 1 0.00
854 3 0.00
855 2 0.00
856 6 0.00
858 7 0.00
859 2 0.00
862 180 0.04
863 196 0.04
864 83 0.02
865 4 0.00
867 1 0.00
868 2 0.00
871 12 0.00
872 26 0.01
874 5 0.00
875 62 0.01
876 5 0.00
877 84 0.02
878 210 0.05
879 30 0.01
880 504 0.11
881 452 0.10
882 121 0.03
883 489 0.11
884 2 0.00
885 11 0.00
886 39 0.01
887 12 0.00
888 112 0.02
889 591 0.13
890 250 0.05
891 3 0.00
892 1 0.00
893 196 0.04
894 1 0.00
895 88 0.02
896 194 0.04
897 49 0.01
898 42 0.01
899 2 0.00
900 42 0.01
901 228 0.05
902 6 0.00
904 2 0.00
906 1 0.00
908 42 0.01
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (887 bp):
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
ATGTGCTGGTGCGTATTTTTCTTCGTCGGGGCACCATCCGGAGCATCGCCGGAGAACCTGACCGG
CGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTAAA
GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAA
TCCCGAACCATAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCACGAAACTT
CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
CTGGCCGGCGTAGTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
GTCTAAGATCAGACCAGATCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGG
CCGATCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
Found at i:12560 original size:25 final size:26
Alignment explanation
Indices: 12526--12577 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
12516 GTTGACTTAG
12526 GCATACGGAGTTCATTC-CAGTCTAA
1 GCATACGGAGTTCATTCTCAGTCTAA
*
12551 GCATATGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCTCAGTCTAA
12577 G
1 G
12578 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 16 0.64
26 9 0.36
ACGTcount: A:0.27, C:0.21, G:0.21, T:0.31
Consensus pattern (26 bp):
GCATACGGAGTTCATTCTCAGTCTAA
Found at i:13439 original size:26 final size:26
Alignment explanation
Indices: 13403--13455 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
13393 GTTGACTTAG
*
13403 GCATACGGAGTTCATTTCC-AGTCTAA
1 GCATACAGAGTTCA-TTCCAAGTCTAA
13429 GCATACAGAGTTCATTCCAAGTCTAA
1 GCATACAGAGTTCATTCCAAGTCTAA
13455 G
1 G
13456 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 4 0.16
26 21 0.84
ACGTcount: A:0.30, C:0.23, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCAAGTCTAA
Found at i:14326 original size:26 final size:26
Alignment explanation
Indices: 14286--14338 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
14276 GTTGACTTAG
*
14286 GCATACGGAGCTCATTTCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
*
14312 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGCTCATTCCCAGTCTAA
14338 G
1 G
14339 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGCTCATTCCCAGTCTAA
Found at i:15199 original size:26 final size:26
Alignment explanation
Indices: 15169--15221 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
15159 GTTGACTTAG
*
15169 GCATATGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
* *
15195 GCATACGGATTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
15221 G
1 G
15222 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.25, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:17318 original size:718 final size:715
Alignment explanation
Indices: 15195--17393 Score: 3098
Period size: 718 Copynumber: 3.0 Consensus size: 715
15185 CCCAATCTAA
* * * * * *
15195 GCATACGGATTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGACAGCACATGCT-AT
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAGCACATGCTGA-
* ** *
15259 GCTCAGGCATGCACTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACTGGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGGAG
* * * *
15324 AACCTGACCGACGGCATTGGGGTTCCAACGATCG-GGGGGGCTGGACGGGTGTTCGCACATGATG
130 AACCTGACCGACGGCATTGGGGTTCCAGCGATCGAGGGGGTC-GGAGGGGTGTGCGCACATGATG
* *
15388 TGCA-ATGCGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACT
194 TG-AGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACT
*
15452 CACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
258 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
15517 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGGGTTTTTAGCTGAATATTT
323 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
* * *
15582 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTACTTCCGAAA
388 TGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAA
* * *
15647 AAATTTTAAAAAAT-CTCGAACC-GAAAAGTTTCAAAAATCGTGAAAATTAGAAAACGAGTTGTC
453 AAATTTTAAAAAATCCT-GAACCTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
*
15710 TTGCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
517 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
15775 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCAACGGCTTG
582 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC-ACGGCTTG
* * * *
15840 CGCATCCCGTCTCTCTAGTCGGCGTAGTGCCCGCCCGTCCG-C-CCCGTTCGTTTCATCGGTTGG
646 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCCCGCTCGTTTCATCGGTTGG
15903 CTTAG
711 CTTAG
* *
15908 GCATACAGAGTTCATTCCC-GTCTAAGCATGCGGAATTCACTCCCAGTCTAAGATCTGACCAGAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C---A--GA----C---C---G----GACCA-A-
15972 TGGGGTTGC-GCAGCACATGCTGAGCTCGGGCATGTGCTGGTGCCACGT-TTTTTCTTCGTCGGG
43 --GGGTTGCGGCAGCACATGCTGAGCTCGGGCATGTGCTGGTG-C-CGTATTTTTCTTCGTCGGG
** * * * * *
16035 GCACCATCACCGAAGGATCACCAGAGAACCTGACCGACGGCATTGGGGTTCCTGTGATCGAGGGG
104 GCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCAGCGATCGA-GGG
*
16100 GGTCGGAGGGGTGTGCGCACATGATGTGCGATGGGTTGCT-GTACTTGGCCCTTATATTGGCCCC
168 GGTCGGAGGGGTGTGCGCACATGATGTGAGATGGG-TGCTGGTACTTGGCCCTTATATTGGCCCC
* * * *
16164 CTATCCCTCATCAAACCTCGAGAACCCACACCCCCATAAAGAGCATTTGAGATTTTACAGCTTTG
232 ATATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
16229 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
297 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
*
16294 CACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAATTACAAGGATCATGTCTA-CA
362 CACTTTGAGTTTTTAGCTGAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCA
* **
16358 AGTTTGGGGCCAAAACTCCTTCTGAAATAATTTTAAAAAATCCTGAACCTCAAAAAGTTTTGAAA
426 AGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGAACCT-AAAAAGTTTCAAAA
* * * *
16423 ATCGTGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTCAAGGCTTAAGGAACAATT
490 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT
* * * *
16488 ATATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTGAACTCA
555 GTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCA
* * * *
16553 CCTACCACCCTATCGATCCACAGCTTGTGCATCCCGTCTCTCTGGCCGACATAGTGCCCGCCCGC
620 CCTACCACCCTATCGAT-CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGC
*
16618 CCGCCTGCCCGCTCGTTTCATCGATTGGCTTAG
684 CCGCC-GCCCGCTCGTTTCATCGGTTGGCTTAG
* *
16651 GCATACGGAGTTCACTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAGCACATGCTGAG
* * * *
16716 GTCGGGCATGTGTTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGGAGA
* * *
16781 ACCTGACCGGCGGCATTGGGGTTCCGGCGATTGAGGGGGTCGG-GGGGTGTGCGCACATGATGTG
131 ACCTGACCGACGGCATTGGGGTTCCAGCGATCGAGGGGGTCGGAGGGGTGTGCGCACATGATGTG
* * *
16845 AGATGGGTGCTGGTATTTGGCCCTTATATTGGCCCCATATCCCTCATCAAAACTTGAGAACTCAC
196 AGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTCAC
* * *
16910 ACCCCCTTAAAGAGCATTTGAGATTTTAGAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAAC
261 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
16975 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAATTCGAGTTTTTAGCTGAATTTATTTG
326 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTT-TTTG
* *
17040 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAGGTTTGGGACCAAAACTCCTTCTGAAAAA
390 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
* *
17105 ATTTTAAAAAATCCTGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTT
455 ATTTTAAAAAATCCTGAACC-TAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
17170 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCGTAAAAATGGCA
519 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
17235 TTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATGCACGGCTTGCG
584 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT-CACGGCTTGCG
* * * *
17300 CATCCTGTCTCTCTGGCCGGCGTAGTGGCCGCCTG--C-CCGCCCGCTCGTTTCGTCGGTTGGCT
648 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCCCGCTCGTTTCATCGGTTGGCT
17362 TAG
713 TAG
* *
17365 GCATATGGAGTTCATTACCAGTCTAAGAT
1 GCATACGGAGTTCATTCCCAGTCTAAGAT
17394 TGAACCAGAC
Statistics
Matches: 1317, Mismatches: 122, Indels: 93
0.86 0.08 0.06
Matches are distributed among these distances:
712 7 0.01
713 19 0.01
714 52 0.04
715 2 0.00
716 8 0.01
717 226 0.17
718 244 0.19
719 76 0.06
720 30 0.02
722 1 0.00
723 6 0.00
726 1 0.00
727 1 0.00
730 1 0.00
733 5 0.00
734 1 0.00
736 27 0.02
737 75 0.06
738 243 0.18
739 50 0.04
740 189 0.14
741 2 0.00
742 1 0.00
743 43 0.03
744 7 0.01
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (715 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAGCACATGCTGAG
CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCACCGGAGA
ACCTGACCGACGGCATTGGGGTTCCAGCGATCGAGGGGGTCGGAGGGGTGTGCGCACATGATGTG
AGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTGT
GCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
TTTTAAAAAATCCTGAACCTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
GGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCACGGCTTGCGCAT
CCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCGCCCGCTCGTTTCATCGGTTGGCTTAG
Found at i:19291 original size:26 final size:26
Alignment explanation
Indices: 19252--19307 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
19242 TGGGTTGACT
*
19252 TAAGCATACGAAGTTCATTCCCAATC
1 TAAGCATACAAAGTTCATTCCCAATC
* *
19278 TAAGCATACAAAGTTCATTCCTAGTC
1 TAAGCATACAAAGTTCATTCCCAATC
19304 TAAG
1 TAAG
19308 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.36, C:0.23, G:0.12, T:0.29
Consensus pattern (26 bp):
TAAGCATACAAAGTTCATTCCCAATC
Found at i:19622 original size:884 final size:882
Alignment explanation
Indices: 16651--32525 Score: 17944
Period size: 873 Copynumber: 17.9 Consensus size: 882
16641 ATTGGCTTAG
* * *
16651 GCATACGGAGTTCACTCCCAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
16716 GTCGGGCATGTGTTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGAGA
* * *
16781 ACCTGACCGGCGGCATTGGGGTTCCGGCGATTGAGGGGGTCGGGGGGTGTGCGCACATGATGTGA
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * * *
16846 GATGGGTGCTGGTATTTGGCCCTTATATTGGCCCCATATCCCTCATCAAAACTTGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
16911 CCCCCTTAAAGAGCATTTGAGATTTTAGAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAACG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
16976 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAATTCGAGTTTTTAGCTGAATTTATTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
17041 GCATGCCAACAAAAATACAAGGATCATGTCTACCAGGTTTGGGACCAAAACTCCTTCTGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-AAAAAA
* * *
17106 TTTTAAAAAATCCTGAACCATAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* *
17171 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCGTAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* *
17236 TGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATGCACGGCTTGCGC
583 TGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * *
17301 ATCCTGTCTCTCTGGCCGGCGTAGTGGCCGCCTGCCCG--C-CCGCTCGTTTCGTCGGTTGGCTT
647 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCTT
* * * * * *
17363 AGGCATATGGAGTTCATTACCAGTCTAAGAT-TGAACCAGACCGAGGGTTGTGGTAGTAGGATTG
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGAGGGTTGCGGCAGTAGGA-TC
* * * * *
17427 GCAGCACCCAGAGGGAGACCCAACCGATCCCC-GACTTGCGCATCCCACCCCTCTAGC-CG--AC
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCT-GCGCGCCGC
* * *** * * * ***** * *
17488 --TGAG-CGCCCG-C--ACGC-T-CG--TTTCGTGGGTTGACTTAG
838 GTTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTC-TAA
* *
17524 GCATACGGAGTTCATTCCCAATCTAAGATTGGACTC-GACCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGAC-CGGACCGAGGGTTGCGGCAGCACATGCTGG
* **
17588 GCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTTGGAGCATCGCTGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGC-GGAG
* * * * *
17653 AACCTGACCGACGGCATTGGGGTTTCGACGATCGGGGGGTCGGGGGTGTGTGTGCACATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGG-GTGTGCGCACATGATGTG
*
17718 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
17783 ACCCCCTTAAAGAGCATTTGAGATTTTTCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
17848 GGGGACACTTTTTTCAAATGGTCACAAAAGCTTGTACACTTCGAGTTTTTAGCTGAATTTATTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
17913 TGCATGCCAACAAAAATACAAGGATCATGTCTACCAGGTTTGGGGCCAAAACTCCTTCTGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-AAAAA
* *
17978 ACTTTAAAAAATCCCGAACCAG-AAAAAGTTTCAAAAATCATGAAAAATACAAAACGAGTCGTCT
452 ATTTTAAAAAATCCCGAACC-GTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * * *
18042 TCCCATGAAACTTCATGTAAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*
18107 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATGCACGGCTTGC
581 ATTGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
** * * * *
18172 GCATCCTATCTCTCTGGCCGGCGTAGTGGCCGACTGCCCG--C-CCGCTCGTTTCGTCGGTTGGC
645 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGC
* * * * * *
18234 TTAGGCATACGAAGTTCATTACCAATCTAAGAT-TGAACCAGACCGAGGGTTGCGGTAGCAGGAT
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGAGGGTTGCGGCAGTAGGA-
* * *
18298 TGGCAGCACCCAGAGGGGGACCCGACCGATCCCC-GACTTACGCATCCCGCCCCTCT--G-GCCG
773 TCGCAGCACGCAGAGGGGGACCCGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCTGCGCGCCG
* * ** * ** *** * * *
18359 AC--TGAG-CGCCTG-C--ATGC-T-CGTTTTGTGGGTT--GACT-TAG
837 -CGTTGCGTGGGTTGACTTAGGCATACG--AAGTTCATTCCCAGTCTAA
* * *
18397 GCATACGTAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** ** *
18462 CTCGGGCATGTGCTGGTCCCATATTTTTCTTCGTCGGGGCACCATCATCGGAGCATTGCCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGAGA
* *
18527 ACCTGACCGACGGCATTGGGGTTCCGGCGATCGGCGGGGCCGGGGGGTGTGCGCACATGATGTGA
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGG-GGGGCCGGGGGGTGTGCGCACATGATGTGC
* *
18592 GATGGGTGCTGGTACTTAGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
18657 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
18722 GGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTCT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * *
18787 GCATGCCAAAAAAAATACAAGGATCACGTGTACCAGGTTTGGAGCCAAAAATCCTTCTAAAAAAT
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTAAAAAA-
* * * * *
18852 TTTTAAAAAATCCCAAACAGAAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAATCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* *
18917 CCATGAAACTTCACGTGAGGGCTTAAGGGACCATTGTATGAATTTACTAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* *
18982 TGGCTGGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGC
583 TGGCT-GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* *
19047 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCAGCTCATTTCGTTGGTTGGCT
647 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCC-GCTCGTTTCGTCGGTTGGCT
** *
19112 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCC-GACTAAGGGTTACGGCAGTAGGATC
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGA-CCAGACCGAGGGTTGCGGCAGTAGGATC
* * * * *
19176 AGCAGGACGTAGAGGGGGACCCGACCGAACCCCAGCTTGCACATCCTGCCCCTCTG-G-G-CG-G
775 -GCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGCGCGCCGCG
* *
19237 TTGCGTGGGTTGACTTAAGCATACGAAGTTCATTCCCAATCTAA
839 TTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
** * ** * *
19281 GCATACAAAGTTCATTCCTAGTCTAAGATCGGACCGGACCGAGCATTGTGGCAGCACATACTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*** *
19346 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTTACCGGGGCACCATTGCCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGAGA
* *
19411 ACCTGACCGACGGCATTGGGGTTCCGGCAATCGAGGGGGCCGGGGGGTGTGCGCACATGATGTGC
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
19476 GATGGGTGCCGGTACTTTGCCCTTATATTGGCCCGCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
19541 CCCCCTTAAAGTGCATTGGAGATTTTACAGGTTTGCTCCCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
19606 GGGACACTTTTTTCAAATGGTCACAAAAGCTTGTACACTTCGAGTTTTTAGCTGAATTTATTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
19671 GCATGCCAACAAAAATACAAGGATCATGTCTACCAGGTTTGGGGCCAAAACTCCTTCTGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-AAAAAA
* *
19736 CTTTAAAAAATCCCGAACCAG-AAAAAGTTTCAAAAATCATGAAAAATACAAAACGAGTCGTCTT
453 TTTTAAAAAATCCCGAACC-GTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * * *
19800 CCCATGAAACTTCATGTAAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
19865 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATGCACGGCTTGCG
582 TTGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
19930 CATCCTGTCTCTCTGGCCGACGTAGTGGCCGCCTGCCCG--C-CCGCTCGTTTCGTCGGTTGGCT
646 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCT
* * * * * *
19992 TAGGCATATGGAGTTCATTACCAGTCTAAGAT-TGAACCAGACCGAGGGTTGTGGTAGTCGGATT
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGAGGGTTGCGGCAGTAGGA-T
* * * * * *
20056 GGCAGCACCCAGAGGGAGACCCAACCGATCCCC-GACTTGCGCATCCCACCCCTCTAGC-CG--A
774 CGCAGCACGCAGAGGGGGACCCGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCT-GCGCGCCG
* * *** * * * ***** * *
20117 C--TGAG-CGCCCG-C--ACGC-T-CG--TTTCGTGGGTTGACTTAG
837 CGTTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTC-TAA
* *
20154 GCATACGGAGTTCATTCCCAATCTAAGATTGGACTC-GACCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGAC-CGGACCGAGGGTTGCGGCAGCACATGCTGG
* ** *
20218 GCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTTGGAGGATCGCTGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGC-GGAG
* * * * * *
20283 AACCTGACCGACGGCATTGGGTTTTCGACGATCGGGGGGTCGGGGGTGTGTGTGCACATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGG-GTGTGCGCACATGATGTG
*
20348 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
20413 ACCCCCTTAAAGAGCATTTGAGATTTTTCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
20478 GGGGACACTTTTTTCAAATGGCCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* ** * ** * *
20543 TGCATACCAAGTAAAATACAAGGATCATGTCTAAAAAGTTTGGGGCTAAAACTCCATTCAAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCTAAAAA
* *
20608 ATTTTTAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT-TC
452 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT-
20672 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGGC
516 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
20736 ATTGGCACAT-AAGAAATATTAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTT
581 ATTGG--C-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
20800 GCGCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCTCGCCCAACCTGCCGCT--TTTCGTCGGTT
643 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCC-GCCCGCCGCTCGTTTCGTCGGTT
* * * * * * *
20863 GGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCGGACTGAGGGTTGCAGCAGCAAG
707 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGG
* * *
20928 ATCGGCAGCACACAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTGTGGCAGGC
772 ATC-GCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCC--T------C
* * * *
20993 TGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGAATACGGAGTTCATTCCCAGTCTAA
828 T--GCG--CGC-CG--CGTTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* ** * * *
21055 GCATACGAAGTTCATTCCCAGTCTAAGATCGGAACCGGATAGAGGGTTGCAAG-AACACATTCTG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGG-ACCGGACCGAGGGTTGC-GGCAGCACATGCTG
* * * *
21119 GGCTCGGGCAGGTGCTGGTGCCACATTTTTCTTTGCCGGGGCACCATCGCCGGAGCATCGTCGGA
64 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGA
* * * ** *
21184 GAACCTGACCGACGACATTAGGGTTCCAACGATC-GGGGGCC-GGGGGTGTGCGCACATGATCTG
128 GAACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
21247 CGATGGGTGATGGTACTTGGCCC-TATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
21311 ACCCCCTTAAATAGCATTTGATA-TTTACAGGTTTGCT-CCAGTA-CCATTAAAGTGTCTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
21373 GGGGATAGTTTTTTCAAATGGTCACAAAATCCTGTACACTTTTGAGTTTTTAGCTGAATTTTTTT
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTTT
* * * ** *
21438 GTGCATGCTAACAAAAATACAAGGATCATGTTGTACCAAGTTTGGAACCAAAACTCCTTTCAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACG-TCTACCAAGTTTGGGGCCAAAACTCC-TTCTAAA
* * ** * * *
21503 AAATTTTAAAACATCTCGAACCACAAAAAGTTTCGAAAATCATGAAAAAAAGAAAACGAGTTGTC
450 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* * * * *
21568 CTGCCATGAAACATCACGTGCAGGCTGAAGGGGCCATTGTATGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
21633 CATTGGC-ACATAGAAATATGAAGATG-GCCTAAACCCACCTACCATCTTATCGATCCACGGCTT
580 CATTGGCTGC--AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* ** *
21696 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCC-TCC-CATGCAC-CCGCTCGTTTCGTCGGTTG
643 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTG
* * * * * *
21758 GCTTGGGCATACGAAGTTCATTCCCAATCTAAGATCAGATCAAACCGAGGGTTGTGGCAGTAGGA
708 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGA
** *
21823 TCAGCAGCACGCAGAGGGGGACCCGGTCGATCCCCAGCTTACGCATCCCGCCCCTCTGGCCGGTT
773 TC-GCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCT-G-C----
*
21888 GAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTAA
831 --GCG--C---CG--CGTTGCGTGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGTCTAA
* *
21949 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
22014 CTCGGGCAAGTGCTGGTGCCACATTTTTCTTCGCCAGGGCACCATCGTCGGAGCATTGCAGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGC-GGAGA
* * * *
22079 ACCTGACCAGCGG-ATTGGGGTTCCGACGATCGGGGGGTCGAGGGGGTGTGCGCACATGATGTAC
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCG-GGGGGTGTGCGCACATGATGTGC
* * * *
22143 GATGGGTGATGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTTGAGAACTCACG
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* **
22208 CCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAACA
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
22273 GGGTCACTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
22338 GCATGCCAAAAAAAATACAAGGATCATGTGTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTAAAAAA
* * * * *
22403 ATTTACAAAATCTCTAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* *
22468 CCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
** * *
22533 TGGCACACAAAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGC
583 TGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* *
22598 ATCCCGTCTCTCTGGCCGACGTAGT--------GCCCG--C-CTGCTCGTTTTGTCGGTTGGCTT
647 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCTT
* * * * * * **
22652 AGGCATACGAAGTTCATTCCTAGTCTAAGATTAGATCAGACAGAGGGTTGTGGCAACAGGATCGG
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGATC-G
* * * *
22717 CAGCACGTAGAGGGGGGCCC-AGCCGATCCCCAACTTACGCATCCCGCCCCTCTGGCCGATTGAG
776 CAGCACGCAGAGGGGGACCCGA-CCGATCCCCAGCTTGCGCATCCCG-CCC-CT---C---T--G
* *
22781 CGCCTGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
830 CG-C-GC-CG--CGTTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * * *
22839 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAAGGTTACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * *
22904 CTTGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATTACCGAAGCATCACAGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGC-GGAGA
* * * * *
22969 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGGGTACAGGATATGC
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
23034 AATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
23099 CCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * * *
23164 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTTCAAATTTTTAGCTGAAGTTTTTTAT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* *
23229 GCATGCCAACAAAAATACAAGGATCACGTATACCAAGTTTGGGG-CAAAACTCCTTCCGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTAAAAAA
* * * * *
23293 TTTTAAAAAATCTCGAACCGTAAAAAGTTACGAAAATCATGAAAAATA-AAAGAGGAGTTGTCTT
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA-ACGAGTCGTCTT
* * *
23357 GCCATGAAATTTCACGTGACGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
23422 TTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCG
582 TTGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
23487 CATCCCGTCTCTCTGGCCGACGTGGTGCCCGCCCGCCCGCCCATCCGCTCGTTTCTTCGGTTGGC
646 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCC-GCCGCTCGTTTCGTCGGTTGGC
* ** * * *
23552 TTAGGCATACGGAGTTCATTCCCAGTCTAACATTGGATCAGACCGAGGGTTACAGCAGTAGGATC
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGATC
* * * * * * * * * *
23617 GACAGCACGCAGAGAGGGACCTGGCAGATTCCCAGTTTGCACATCTCACCTCTCTTGCCGGCTGA
775 G-CAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTC-TG-C-GC---
* * * * *
23682 GCACCAGCAAGCTTGTTTCGTGTGTTAACTTAGGCTTACGGAGTTCATTCCTAGTCTAA
833 G--CC-GC--G-TTG---CGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* *
23741 GCATACGGAGTTCATTCCC-GATCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAG-TCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
* * * * *
23805 GCTCGGGCATGTGCTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCGCTGGAGCATCACCGAAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC-GCGGAG
* * * * * * * *
23870 AACCTGACTGGCGGCATCGGGGTTTCGGTGGTCGGGGGGTCAGGGGGTGTGCGCACAGGATGTGC
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
* * *
23935 TATGGGTGCTGGTACTTGGCCGTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
24000 TCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGGTGCCAGTAGCAATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
24065 GAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTAT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
24130 GCATGCCAACAAACATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-AAAAAA
* * * * *
24195 GTTTAAAATATCCCGAACCATAAAAAGTTTAAAAAATCATGAAAAATAGAAAACGGGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
*
24260 GCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
24325 TGGAACAT--AGAATTATGAAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGCTTGT
583 TGG--C-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
24388 GCATCCCGTCTCTCTGGCCGGCGTAGT--------GCTCG--C-TCGCTCGTTTCGTCAGTTGGC
645 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGC
* * * *
24442 TTAGGCATACGAAGTTCATTCCCAGTCTATGATCCA-ACCGGATCGAGGGTTGCGGCAGTAGGAT
710 TTAGGCATACGGAGTTCATTCCCAGTCTAAGAT-CAGACCAGACCGAGGGTTGCGGCAGTAGGAT
** * * *
24506 CGACAGCACGCAGAGGGGGACCCGGTCGATCCCC-GACTTCCGCAACCCACCCCTCTAGCCGGCT
774 CG-CAGCACGCAGAGGGGGACCCGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCT-----GC-
* * *
24570 AAGCGCCCGCACGCTTGTTTCGTGTGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAA
831 --GCG-CCG--CG-TTG---CGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* *
24631 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
24696 GTCGGGCATGTGCTGGTGCCGCATTTTTGTTCGTCGGGGCACCAT---C---G---C-CGGAGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCGGAGAA
* * * * * * * *
24751 CTTGATCGACGACATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGTGTGCACACATAATGTGCG
131 CCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
24816 ATGGGTGCTGGTTCTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAA-CTATGAGAACTCACA
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT-CGAGAACTCACA
* * *
24880 CCCTCTTAAAGGGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
**
24945 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTAAGTTTTTAGCTGAATTTTTTT-T
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
25009 GCATCCCAACAAAACTACAAGGATCACGTCCACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAA
389 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTAAAAAA
* * * * *
25074 TTTTAAAAAATCTCAAACCGTAAAAAGTTTC--AAATCGTGAAAAATAAAAAAGGAGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* *
25137 CCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
25202 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCGTGTGC
583 TGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * *
25267 ATCCCGTCTCTCTGGCAGGCGTAGTGCCC-CCACGCCCG--C-CCGCTCTTTTCGTCGGTTGGCT
647 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCC-CGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCT
* * * * * * ** *
25328 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCTGA-CTGAACTGAGGCTTACAGTGGCAGGATT
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGCGGCAGTAGGA-T
* * * * * * * *
25392 GGCAGCACGTAGAGTGGGACCTGACCAATCACCGGCTTGTGCATCCCGTACCTCTGGCCGGTTGA
774 CGCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCG---C-C---CC---T--
* * * * * * *
25457 GTGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATATGGAGTTCATTCACAGTCTAA
827 CTGCGCGC-CG--CGTTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * *
25516 GCATACGGAGTTCATTCCCAGACTAAGATCGGACTGGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * * *
25581 CTCGGGCATATGCTGGTGCCTTATTTTTCTTAGTCGGGGCATCATCGTCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGAGA
* * * *
25646 ACTTGACCGGCCGCATTGGGGTTCCGGCGATC-----G--GAGGGGTGTGCACACATGATGTGCG
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* ** *
25704 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAATTCTCAAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
25769 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGACATTAAAATGTCTGAAATGT
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* ** * *
25834 GGACACCTTTTTCAAATGGTCGTAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTATG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * *
25899 CATGCCAACAAAAATGCAAGGATCACGTCTAGCAAG-TTGAGAGCCAAAACTCCTTCCCAAAAAA
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTG-GGGCCAAAACTCCTT-CTAAAAAA
** *
25963 TTTTAAAAAATCCCGAACCCCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
*
26028 CCATGAAACTTCACGTGAAGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
26093 TGGCATGTAGAAATATGAAGATATGCCTAAACCCACCGACCACCCTATTGATCCACGGCTTGCGC
583 TGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* ** * * *
26158 ATACCGTCTCTCTGGCCGGTGTAGTGCCCGCCCACCCGCCTGCCCGCTCGTTTCGTTGGTTGGCT
647 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCG-CCGCTCGTTTCGTCGGTTGGCT
* * * *
26223 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGTAGCAGGATCG
711 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGATC-
* * * * * * * * *
26288 GTAGCACACAGAGTGGGACCCGACCAATCGCCGGCTTCCGCATCCCGTCCCTCTG-GC-CGGC-T
775 GCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGCGCGCCGCGT
* *** * * * * * * *
26350 AAGCGCCCG-T-ACGCT-CG-TTTCGTAGGTTGA----C--T-TAG
840 -TGCGTGGGTTGAC-TTAGGCATACG-AAGTTCATTCCCAGTCTAA
* * *
26385 GCATACGAAGTTCATTCCCAGCCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
26450 CTCGGGAATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCAT---C---G---C-CGGAGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCGGAGAA
* * * *
26505 CCTGACCGGCCGCGTTGGGGTTTCGGCGAT--------CGGGGGGTGTGCACACATGATGTGCGA
131 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
* *
26562 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACCCC
196 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
* * *
26627 CCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCCATTAAAGTTTCTGAAATGGG
261 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
*
26692 GACACTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
326 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* ** * * ** *
26757 ATTCCAGGAAAAATACAAGAATCACATCTACCAAGTTTGGGGCCAAAACTCCCCCCGAAAAAATT
391 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCTTCTAAAAAATT
* * *
26822 CTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCATCTTGCC
455 TTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
*
26887 ATGAAACTTCACGTGAAGGCTTAAGGCACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
520 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * *
26952 GCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCTACGGCTTGCGCAT
585 GC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
* *
27017 CCCGTCTCTCTGG-CTAGCGTAGT----GCCCGCCCG--C-CCGTTCGTTTCGTCGGTTGGCTTA
649 CCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCTTA
* * * *
27074 GGCATACAGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGTAGTAGGATCGAC
713 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGATCG-C
* * * *
27139 ATCACGCAGAGGTGGACCCGACCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAACG
777 AGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCT-----GC-G--CG
** * * * *
27204 CCCGTACGCTCATTTTGTGGGTTGACTTAGGCAAATGGAGTTCATTCCCAGTATAA
834 -CCG--CG----TTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * * *
27260 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACTGGACCAACGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* **
27325 CTCGGGCATTTGCTGGTGCCATATTTTTCTTCGTCGGGGCACCAT---C---G---C-CGGAGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCGGAGAA
* * * * * *
27380 CCTGTCCGGTGGCATTGGGGTTTCGTCGGTCGGGGGGCCGGGGGGGTGTGCACACATGATGTGCG
131 CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCG
* * *
27445 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCAAAAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
27510 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTAAAATGT
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
27575 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * * * * * *
27640 CATGCCAAAAAAAATACAAGTATCACATCTGCCAACTTTGGGGACAAAAGTCCTTCCGAAAAAAT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTAAAAAAT
* *
27705 TTTAAAAAATCCTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCCTGC
454 TTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
*
27770 CATGAAACTACACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * * *
27835 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCTTACGCA
584 GGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * *
27900 TCCCGTCTCTCTGGCC-AGCGTAATGCCCGCCCG-CC-CAC-TCGCTCGTTTTGTCGGTTGGCTT
648 TCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCTT
* ** * * * ** *
27961 AGGCATACGTAGTTCATTCCCAGTCTAAGATTTGATCAGACCAAGGGTTTCGGCAACAAGATCGA
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGATCG-
* * * *
28026 CAGTACGCAGAGGGGGACCAGTCCGATCCCCAGCTTGCGCATTCCGCCCTTCTGGCCTACTGAAC
776 CAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCA-TCC-CGC--C---CCT-CTG--C
* * *
28091 GCCCGCACGCTTGTTTCGTTGGTTGACTTAGGCATAC-AGAGTTCATTCCTAGTCTAA
831 G--CGC-CGC--GTTGCGTGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGTCTAA
** * * * *
28148 GCATACGGAGTTCATTCGTAGTCTAAGATTGGATCAGACCGCA-GGTTGCGGCAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG-AGGGTTGCGGCAGCACATGCTGG
* * * *
28212 GCTCGGGCAAGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCAGAGCATCGCCGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGAG
* * * *
28277 AAACTGACCGGCGGCATTGGGGTTCCGGCGATCGAGGGGGCC-GAGGG-GTGCGTAGATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTG
*
28340 CGATGGGTGCTGGTACTTGGCCCTTATATT-GTCCCCTATCCCTCATCAAACCTCGAGAACTCAC
193 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
28404 ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT
258 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
28469 GGCGACACTTTTTTCAAATTGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTGAATTTTTTTT
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
*
28534 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-TCAAAA
387 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-AAAA
* * * * * *
28598 AATTTTTAAAAAATCCTGAACCGTAAAAAGATTGAAAAATCGTGAAAAAAAGAAAACAAGTCGTC
451 AA-TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
28663 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*
28728 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTA
580 CATTGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * ** * * * * *
28793 AGCATCCCGTCTCACTGGCCGGCACAGT----GCCC-ACC-CAC-CCGCTAGTTTTGTCGGTTGC
644 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGG
* ** * ** *
28851 CTTAGGCATATGGAGTTCATTCCCAGTCTAAGATTGGACCATATTGAGGGTTTCGGCAGTAGGAT
709 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGAT
* * ***
28916 CTGTAGCACACAGAGGGGGACCCGGTTGATCCCCAGCTTGCGCATCCCGCCCCACTGGCCGGCTG
774 C-GCAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCG-CCC-CT------C--
* * *
28981 ATTGCCCGCGCGCTCGTTTCGTGGTTTGACTTAGGCATAC-AGAGTTCATTCCCAGTCTAA
828 --TG--CGCGC-CGCGTTGCGTGGGTTGACTTAGGCATACGA-AGTTCATTCCCAGTCTAA
* * * * *
29041 GCATATGGAGTTCATTCCCAGTCTAATATCGGGCTGGATCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * ** * *
29106 CTCAGGCATTTGCTGGTGTCGCATTTTTCTTCGTCGAGTCACCATCATCTGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATC-GCGGAGA
** * * *
29171 ACCTGACCCCCGGCATTGGGGTTCCGGCGGTCGAGGGGGTCGGGGGGTGTGCACACATGATGTGC
130 ACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
29236 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTCACA
194 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
29301 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
259 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT-
* *
29366 GGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTG
323 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * * *
29431 TGCATACCAACAAAAACACAAGGATCACATCTACCAAGTTTGGTGCTAAAACGCCTTCCGAAAAA
388 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CTAAAAA
* * *
29496 ATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * * *
29561 GCCATTAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAGGCCATAAAAATGACA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * *
29626 TTGGC-ACACAAATATATGAAGATTTGCCTAAACCCA-CAATCCACCCTATCGATCCACGGCTTG
582 TTGGCTGCA-GAA-ATATGAAGATGTGCCTAAACCCACCTA-CCACCCTATCGATCCACGGCTTG
* * * * *
29689 CGCATCCCATCTGTCTGGTCGACGTAGTGCCCGACCACCCGCCCGCCCGTTCGCTCGTTTCATCG
644 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG----CCCGCCCGCCCG-CCGCTCGTTTCGTCG
* * * * *
29754 GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCAGACTGAGGGTTGTGGCAGC
704 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGT
* * * * ** * * * *
29819 AAGATCGATAGCACCCAGAGAGGGACCCGGTCGATCCTCTGCTTGCTCATCCCACCCCACTGGCC
769 AGGATCG-CAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCC-GCCC-CT----
* * *
29884 GGCTGAGCGCCCGTACACTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAATCTAA
827 --CT--GCG--CG--C-CGCGTTGCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
*
29949 GCATACGGAGTTCATTCCAAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGAT
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C---G----GA-C----
*** * * *
30014 CGAGGGTTGCAATAGCACATGCTGGGCTCGGGCAAGTTCTGGTGCCACATTTTTCTTCGTCGGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
* * * * *
30079 CACCATCGCCAGAGCATCGTCGAAGAACCTGGCCGGCAGCATTGGGGTTCCGACGATCGAGGGGG
105 CACCATCGCCGGAGCATCG-CGGAGAACCTGACCGGCGGCATTGGGGTTCCGGCGATCG-GGGGG
*
30144 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTTGCCCCCTAT
168 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* *
30209 CCTTCATCAAACCTCGAGAACTCACA-CCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGC
233 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
*
30273 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGACACAAAATCTTGTACACT
298 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
30338 TCGAGGTTTTAGCTGAATTTTTTTGTGCATGCGAACAAAAATACAAGGATCACGTCTACCAAGTT
363 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
* * * ** * * *
30403 T-GGGCCAAAACTCCTTTTGAAAAAGTCTTAAAAAATCTTGAACCGTAAAATGTTTTAAAAATCG
428 TGGGGCCAAAACTCCTTCT-AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCA
*
30467 TGAGAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
492 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* * *
30532 GAATTTACAAGCCATAAAAATGGCATTGGAATGTAGAAATATGAAGATGTGCCTAAACCCACCCA
557 GAATTTACAAGCCATAAAAATGGCATTGG-CTGCAGAAATATGAAGATGTGCCTAAACCCACCTA
* * *
30597 CCACCCTATCGATCCACGGCTTGCGGATCCCGTCTCTCTGGCCGACGTAGTGCCCGTCTGCCCGC
621 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGC
* * * * ** * * *
30662 TCGCATGCTTGTTTCATTAGTTGGCTTAGCCATACGGAGTTCATTCCCAATCTAAGATTAGACCA
686 CCGC-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCA
* * * * *
30727 GACTGAGGGTTGTGGCAGTAGGATCGACAGCATGTAGAGGGGGACCCGACCGATCCCTAGCTTGC
750 GACCGAGGGTTGCGGCAGTAGGATCG-CAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGC
* *
30792 GCATCCCGCCCTTCTAGCCGGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGAATTAGGCATACG
814 GCATCCCGCCC--CT------CT--GCG--CGC-CGC--GTTGCGTGGGTTGACTTAGGCATACG
*
30857 GAGTTCATTCCCAGTCTAA
864 AAGTTCATTCCCAGTCTAA
* * *
30876 GCATACGGAGTTTATTCCCAATCTAAGATCGGACCAGG-TCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACC-GGACCGAGGGTTGCGGCAGCACATGCTGG
* ** * * *
30940 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCAACGCCAGAGCAT-GCCAGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCG-CGGAG
* * * *
31004 AACTTGACCGACGACATTAGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATGATG
129 AACCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGCC-GGGGGG-TGTGCGCACATGATG
* * * *
31069 TACGATAGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAATCCTCGAGAACTC
191 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
31134 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAATGTGTCTAAA
256 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
31199 ATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTTTAGCTGAATTTTTT
321 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * * *
31264 TGTGCATGCCAAAAAAAATAAAAGGATCACGTCTAGCAAGTTTGGGGCCGAAACTCATTTTGAAA
386 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-AAA
* * *
31329 AAGTATTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
*
31394 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * *
31459 CATTGGCATGCAGAAATAAGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCATGACTTG
580 CATTGGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * *
31524 CGCATCTCGTCTCTCTGGCC-AGTGTAGTGCCCGCCCGCCCG--C-CCGCTTGTTTTGTCAGTTG
644 CGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTG
* * ** * **** * * *
31585 GCTTAGGCATATGGAGTTCATTCCCTGTCTAAGATTGGACCGGACCGAGGGTCATAGTAGCAAGA
708 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGA
* * * ** *
31650 TCGACAGCACACAGAGGGGAACCAGGTCGATCCCC-GACTTGCGCA--CTGCCCCTCTAGCCTGC
773 TCG-CAGCACGCAGAGGGGGACCCGACCGATCCCCAG-CTTGCGCATCCCGCCCCTCT-G-C-GC
* *
31712 TAAGTGCC-CGTAAGCTCGTTCTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
833 -----GCCGCGT----T-G--C-GTGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
* * * * *
31774 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACCAGACCAAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
31839 CTTGGGCATGTGCTGGTGTCGCATTTTTCTTTGTC-GGGCACCAT--------CAT--CGGAGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCGGAGAA
* ** * * * *
31893 CCTGACCGGCAGCATTGGGGTTCCGATGATCAAGGGGGCCGGGGGGTGTACGGACATGATGTGTG
131 CCTGACCGGCGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
31958 ATGGGTGCTGGTAGTTGGCCCTTATATTGGCCCCCTTTCCCTCATCAAACCTAGAGAACTCACAC
195 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
32023 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG-TGCCAGTAGCCATTGAAGTGTCTGAAATGG
260 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
32087 GGACACATTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
325 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * ** * * **
32152 CATGCCAACAAAAATACAAGGATCACGTCTACCAACTTTAGGGCTGAAATTTCTTCCCAAAAATT
390 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTAAAAAATT
* * * * *
32217 TTAGAAAAATCTCGAACCGCAAAAAGTTTCAAAAATAATGAAAAATGGAAAAGGAGTCGTCTTGC
455 TTA-AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
* * *
32282 CATGAAACTTCATGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * * * * * * *
32347 GGCACGCAGAAATATGAAGATGTACCTAAACCCAGCTGCCACCCAATTGATCCGCAGCTTGCGCA
584 GGC-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * * ** * * *
32412 TCCCGTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGCTCGCCCACTCATTTTTTTGATTGGCCT
648 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCG-CCGCTCGTTTCGTCGGTTGGCTT
* ** * *
32477 AGGCTTACAAAGTTCATTCCCAATCTAAGATCAGACCAGATCGAGGGTT
712 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
32526 TCGGTAGCAC
Statistics
Matches: 13012, Mismatches: 1548, Indels: 869
0.84 0.10 0.06
Matches are distributed among these distances:
848 1 0.00
849 121 0.01
853 8 0.00
854 1 0.00
856 2 0.00
857 450 0.03
858 40 0.00
860 3 0.00
862 1 0.00
863 1 0.00
866 3 0.00
867 3 0.00
868 7 0.00
869 101 0.01
870 2 0.00
872 56 0.00
873 1981 0.15
874 23 0.00
875 249 0.02
876 15 0.00
877 298 0.02
878 13 0.00
879 120 0.01
880 319 0.02
881 13 0.00
882 4 0.00
883 19 0.00
884 1432 0.11
885 358 0.03
886 13 0.00
887 42 0.00
888 504 0.04
889 107 0.01
890 782 0.06
891 449 0.03
892 62 0.00
893 403 0.03
894 217 0.02
895 275 0.02
896 713 0.05
897 722 0.06
898 337 0.03
899 129 0.01
900 155 0.01
901 376 0.03
902 674 0.05
903 165 0.01
904 240 0.02
905 2 0.00
906 5 0.00
907 2 0.00
908 193 0.01
909 3 0.00
910 1 0.00
911 3 0.00
912 1 0.00
913 1 0.00
916 1 0.00
919 1 0.00
920 1 0.00
923 1 0.00
924 1 0.00
925 6 0.00
926 5 0.00
927 203 0.02
929 2 0.00
931 213 0.02
932 102 0.01
933 63 0.00
934 193 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (882 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGCGGAGAA
CCTGACCGGCGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTAAAAAATTT
TAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CTGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
CGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCCGCTCGTTTCGTCGGTTGGCTTAGGC
ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGTAGGATCGCAGCA
CGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGCGCGCCGCGTTGCGTG
GGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
Found at i:21067 original size:26 final size:26
Alignment explanation
Indices: 21031--21081 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
21021 TGACTTAGGA
*
21031 ATACGGAGTTCATTCCCAGTCTAAGC
1 ATACGAAGTTCATTCCCAGTCTAAGC
21057 ATACGAAGTTCATTCCCAGTCTAAG
1 ATACGAAGTTCATTCCCAGTCTAAG
21082 ATCGGAACCG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.25, G:0.18, T:0.27
Consensus pattern (26 bp):
ATACGAAGTTCATTCCCAGTCTAAGC
Found at i:21959 original size:26 final size:26
Alignment explanation
Indices: 21923--21975 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
21913 GTTGACTTAG
21923 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
21949 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
21975 G
1 G
21976 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:22227 original size:896 final size:895
Alignment explanation
Indices: 20154--32525 Score: 15291
Period size: 884 Copynumber: 13.8 Consensus size: 895
20144 GTTGACTTAG
* *
20154 GCATACGGAGTTCATTCCCAATCTAAGATTGGACTC-GACCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGAC-CGGACCGAGGGTTGCGGCAGCACATGCTGG
* * * *
20218 GCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTTGGAGGATCGCTGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGC-GGAG
* * * * *
20283 AACCTGACCGACGGCATTGGGTTTTCGACGATCGGGGGGTCGGGGGTGTGTGTGCACATGATGTG
129 AACCTGACCGGCGG-ATTGGGGTTCCGACGATCGGGGGGCCGGGGG-GTGTGCGCACATGATGTG
*
20348 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
20413 ACCCCCTTAAAGAGCATTTGAGATTTTTCAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
20478 GGGGACACTTTTTTCAAATGGCCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
322 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* ** * ** * *
20543 TGCATACCAAGTAAAATACAAGGATCATGTCTAAAAAGTTTGGGGCTAAAACTCCATT-CAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCC-TTCCGAAAA
*
20607 AATTTTTAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT-T
451 AATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
20671 CTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGG
516 -TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
20735 CATTGGCACATAAGAAATATTAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTT
580 CATTGGCACGT-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
20800 GCGCATCCCATCTCTCTGGCCGGCGTAGTGCCCGCTCGCC-CAACCTGC-CGCTTTTCGTCGGTT
644 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGC-C-CCGC-ACCCGCTCG--TTTCGTCGGTT
* * * * ** *
20863 GGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGATCGGACTGAGGGTTGCAGCAGCAAG
704 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGG
* * * * * * *
20928 ATCGGCAGCACACAGAGGGAGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTGTGGCAGGC
769 ATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGC
* *
20993 TGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGAATACGGAGTTCATTCCCAGTCTAA
834 TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * *
21055 GCATACGAAGTTCATTCCCAGTCTAAGATCGGAACCGGATAGAGGGTTGCAAG-AACACATTCTG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGG-ACCGGACCGAGGGTTGC-GGCAGCACATGCTG
* * * *
21119 GGCTCGGGCAGGTGCTGGTGCCACATTTTTCTTTGCCGGGGCACCATCGCCGGAGCATCGTCGGA
64 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CGGA
* * * * *
21184 GAACCTGACCGACGACATTAGGGTTCCAACGATC-GGGGGCC-GGGGGTGTGCGCACATGATCTG
128 GAACCTGACCGGCG-GATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* *
21247 CGATGGGTGATGGTACTTGGCCC-TATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCAC
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
21311 ACCCCCTTAAATAGCATTTGATA-TTTACAGGTTTGCT-CCAGTA-CCATTAAAGTGTCTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
21373 GGGGATAGTTTTTTCAAATGGTCACAAAATCCTGTACACTTTTGAGTTTTTAGCTGAATTTTTTT
322 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTGAATTTTTTT
* * * ** * *
21438 GTGCATGCTAACAAAAATACAAGGATCATGTTGTACCAAGTTTGGAACCAAAACTCCTTTCAAAA
386 GTGCATGCCAACAAAAATACAAGGATCACG-TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* ** * * *
21503 AAATTTTAAAACATCTCGAACCACAAAAAGTTTCGAAAATCATGAAAAAAAGAAAACGAGTTGTC
450 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* * * * *
21568 CTGCCATGAAACATCACGTGCAGGCTGAAGGGGCCATTGTATGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
21633 CATTGGCACATAGAAATATGAAGATG-GCCTAAACCCACCTACCATCTTATCGATCCACGGCTTG
580 CATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
21697 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCTCCCATGCACCCGCTCGTTTCGTCGGTTGGCTT
645 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCC-CGCACCCGCTCGTTTCGTCGGTTGGCTT
* * * * * *
21762 GGGCATACGAAGTTCATTCCCAATCTAAGATCAGATCAAACCGAGGGTTGTGGCAGTAGGATC-A
709 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGA
* * *
21826 GCAGCACGCAGAGGGGGACCCGGTCGATCCCCAGCTTACGCATCCCGCCCCTCTGGCCGGTTGAG
774 -CAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* *
21891 CGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
838 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
21949 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
22014 CTCGGGCAAGTGCTGGTGCCACATTTTTCTTCGCCAGGGCACCATCGTCGGAGCATTGCAGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGC-GGAGA
* * *
22079 ACCTGACCAGCGGATTGGGGTTCCGACGATCGGGGGGTCGAGGGGGTGTGCGCACATGATGTACG
130 ACCTGACCGGCGGATTGGGGTTCCGACGATCGGGGGGCCG-GGGGGTGTGCGCACATGATGTGCG
* * * *
22144 ATGGGTGATGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTTGAGAACTCACGC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* **
22209 CCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAACAG
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
22274 GGTCACTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
324 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * *
22339 CATGCCAAAAAAAATACAAGGATCATGTGTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAA
389 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * *
22404 TTTACAAAATCTCTAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
454 TTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
* *
22469 CATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTAAAAGCCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
** * *
22534 GGCACACAAAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCA
584 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* *
22599 TCCCGTCTCTCTGGCCGACGTAGT----G-CCCG--CCTGCTCGTTTTGTCGGTTGGCTTAGGCA
649 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCCGCACCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * * *
22657 TACGAAGTTCATTCCTAGTCTAAGATTAGATCAGACAGAGGGTTGTGGCAACAGGATCGGCAGCA
714 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCA
* * * * * ** *
22722 CGTAGAGGGGGGCCCAGCCGATCCCCAACTTACGCATCCCGCCCCTCTGGCCGATTGAGCGCCTG
779 CGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
* *
22787 CACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAA
844 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
22839 GCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGAAGGTTACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *** * *
22904 CTTGGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATTACCGAAGCATCACAGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGC-GGAGA
* * * *
22969 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGGGTACAGGATATGC
130 ACCTGACCGGCGG-ATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
23034 AATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
193 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
23099 CCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATG
258 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * * *
23164 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACGCTTCAAATTTTTAGCTGAAGTTTTTTAT
323 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
23229 GCATGCCAACAAAAATACAAGGATCACGTATACCAAGTTTGGGG-CAAAACTCCTTCCGAAAAAA
388 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * *
23293 TTTTAAAAAATCTCGAACCGTAAAAAGTTACGAAAATCATGAAAAATA-AAAGAGGAGTTGTCTT
453 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA-ACGAGTCGTCTT
* * *
23357 GCCATGAAATTTCACGTGACGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * *
23422 TTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCG
582 TTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * *
23487 CATCCCGTCTCTCTGGCCGACGTGGTGCCCGCCCGCCCGCCCATCCGCTCGTTTCTTCGGTTGGC
647 CATCCCGTCTCTCTGGCCGACGTAGTGCCCG--C-CCCG--CACCCGCTCGTTTCGTCGGTTGGC
* ** * *** *
23552 TTAGGCATACGGAGTTCATTCCCAGTCTAACATTGGATCAGACCGAGGGTTACAGCAGTAGGATC
707 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATC
* * * * * * * * * *
23617 GACAGCACGCAGAGAGGGACCTGGCAGATTCCCAGTTTGCACATCTCACCTCTCTTGCCGGCTGA
772 GACAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * * * * * *
23682 GCACCAGCAAGCTTGTTTCGTGTGTTAACTTAGGCTTACGGAGTTCATTCCTAGTCTAA
837 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
23741 GCATACGGAGTTCATTCCC-GATCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAG-TCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
*** * *
23805 GCTCGGGCATGTGCTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCG-CTGGAGCATCACCGAA
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTC-GGAGCATC-GCGGA
* * * ** * * * *
23869 GAACCTGACTGGCGGCATCGGGGTTTCGGTGGTCGGGGGGTCAGGGGGTGTGCGCACAGGATGTG
128 GAACCTGACCGGCGG-ATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTG
* * *
23934 CTATGGGTGCTGGTACTTGGCCGTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
23999 ATCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGGTGCCAGTAGCAATTAAAGTGTCTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
24064 GGAGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTA
322 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* *
24129 TGCATGCCAACAAACATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * * *
24194 AGTTTAAAATATCCCGAACCATAAAAAGTTTAAAAAATCATGAAAAATAGAAAACGGGTCGTCTT
452 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
*
24259 GGCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * *
24324 TTGGAACATAGAATTATGAAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGCTTGTG
582 TTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
24389 CATCCCGTCTCTCTGGCCGGCGTAGT----G-CTCG--CTCGCTCGTTTCGTCAGTTGGCTTAGG
647 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCCGCACCCGCTCGTTTCGTCGGTTGGCTTAGG
* * * * * *
24447 CATACGAAGTTCATTCCCAGTCTATGATCCA-ACCGGATCGAGGGTTGCGGCAGTAGGATCGACA
712 CATACGGAGTTCATTCCCAGTCTAAGAT-CAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACA
* * * * * *
24511 GCACGCAGAGGGGGACCCGGTCGATCCCC-GACTTCCGCAACCCACCCCTCTAGCCGGCTAAGCG
776 GCACGCAGAGGGGGACCCGGCCGATCCCCAG-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * *
24575 CCCGCACGCTTGTTTCGTGTGTTGACTTAGGCATACGGAGTTCATTCCTAGTCTAA
840 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
24631 GCATACAGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
24696 GTCGGGCATGTGCTGGTGCCGCATTTTTGTTCGTCGGGGCACCA---TC---G---C-CGGAGAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCGGAGAA
* * * * * * *
24751 CTTGATCGACGACATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGTGTGCACACATAATGTGCG
131 CCTGACCGGCG-GATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
24816 ATGGGTGCTGGTTCTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAA-CTATGAGAACTCACA
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT-CGAGAACTCACA
* * *
24880 CCCTCTTAAAGGGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATTAAAGTGTCTGAAATG
258 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
**
24945 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTAAGTTTTTAGCTGAATTTTTTT-T
323 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
25009 GCATCCCAACAAAACTACAAGGATCACGTCCACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAA
388 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * *
25074 TTTTAAAAAATCTCAAACCGTAAAAAGTTTC--AAATCGTGAAAAATAAAAAAGGAGTCGTCTTG
453 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* *
25137 CCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
25202 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCGTGTGC
583 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * *
25267 ATCCCGTCTCTCTGGCAGGCGTAGTGCCC-CCACGCCCGCCCGCTCTTTTCGTCGGTTGGCTTAG
648 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCC-C-CGCACCCGCTCGTTTCGTCGGTTGGCTTAG
* * * * *** ** * *
25331 GCATACGGAGTTCATTCCCAGTCTAAGATCTGA-CTGAACTGAGGCTTACAGTGGCAGGATTGGC
711 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGATCGAC
* * * * * * * * ** * *
25395 AGCACGTAGAGTGGGACCTGACCAATCACCGGCTTGTGCATCCCGTACCTCTGGCCGGTTGAGTG
775 AGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * *
25460 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATATGGAGTTCATTCACAGTCTAA
840 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
25516 GCATACGGAGTTCATTCCCAGACTAAGATCGGACTGGACCGAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* ** * *
25581 CTCGGGCATATGCTGGTGCCTTATTTTTCTTAGTCGGGGCATCATCGTCGGAGCATCGTCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CGGAGA
* * * * *
25646 ACTTGACCGGCCGCATTGGGGTTCCGGCGATC-----G--GAGGGGTGTGCACACATGATGTGCG
130 ACCTGACCGG-CGGATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* ** *
25704 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAATTCTCAAGAACTCACAC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
25769 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGACATTAAAATGTCTGAAATGT
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* ** * *
25834 GGACACCTTTTTCAAATGGTCGTAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTATG
324 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * *
25899 CATGCCAACAAAAATGCAAGGATCACGTCTAGCAAG-TTGAGAGCCAAAACTCCTTCCCAAAAAA
389 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTG-GGGCCAAAACTCCTTCCGAAAAAA
* ** *
25963 TTTTAAAAAATCCCGAACCCCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
453 TTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
*
26028 CCATGAAACTTCACGTGAAGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
26093 TGGCATGTAGAAATATGAAGATATGCCTAAACCCACCGACCACCCTATTGATCCACGGCTTGCGC
583 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* ** * *
26158 ATACCGTCTCTCTGGCCGGTGTAGTGCCCGCCCACCCGCCTGCCCGCTCGTTTCGTTGGTTGGCT
648 ATCCCGTCTCTCTGGCCGACGTAGTGCCCG--C-CCCG-C-ACCCGCTCGTTTCGTCGGTTGGCT
* ** *
26223 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGTAGCAGGATCG
708 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCG
** * * * * * * * * *
26288 GTAGCACACAGAGTGGGACCCGACCAATCGCCGGCTTCCGCATCCCGTCCCTCTGGCCGGCTAAG
773 ACAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* *
26353 CGCCCGTACGCTCGTTTCGTAGGTTGAC-T-----TA--G-G--CA-T---A--C---
838 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
26391 G---A---AGTTCATTCCCAGCCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
26450 CTCGGGAATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCA---TC---G---C-CGGAGAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCGGAGAA
* * *
26505 CCTGACCGGCCGCG-TTGGGGTTTCGGCGAT--------CGGGGGGTGTGCACACATGATGTGCG
131 CCTGACCGG-CG-GATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* *
26561 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACCC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
26626 CCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCCATTAAAGTTTCTGAAATGG
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
26691 GGACACTTTTTTTAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
324 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* ** * * **
26756 CATTCCAGGAAAAATACAAGAATCACATCTACCAAGTTTGGGGCCAAAACTCCCCCCGAAAAAAT
389 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * * *
26821 TCTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCATCTTGC
454 TTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
*
26886 CATGAAACTTCACGTGAAGGCTTAAGGCACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
519 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
*
26951 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCTACGGCTTGCGCA
584 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* *
27016 TCCCGTCTCTCTGG-CTAGCGTAGTGCCCG-CCCG--CCCGTTCGTTTCGTCGGTTGGCTTAGGC
649 TCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCCCGCACCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * * * *
27077 ATACAGAGTTCATTCCCAGTCTAAGATCAGATCAGACTGAGGGTTGCGGTAGTAGGATCGACATC
713 ATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGC
* * * * *
27142 ACGCAGAGGTGGACCCGACCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAACGCCC
778 ACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* * * * * *
27207 GTACGCTCATTTTGTGGGTTGACTTAGGCAAATGGAGTTCATTCCCAGTATAA
843 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
27260 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACTGGACCAACGGTTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* *
27325 CTCGGGCATTTGCTGGTGCCATATTTTTCTTCGTCGGGGCACCA---TC---G---C-CGGAGAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCGGAGAA
* * * * * *
27380 CCTGTCCGGTGGCATTGGGGTTTCGTCGGTCGGGGGGCCGGGGGGGTGTGCACACATGATGTGCG
131 CCTGACCGGCGG-ATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCG
* * *
27445 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTCAAAAACTCACAC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
27510 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTAAAATGT
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
*
27575 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAGTTTTTTGTG
324 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * * * * *
27640 CATGCCAAAAAAAATACAAGTATCACATCTGCCAACTTTGGGGACAAAAGTCCTTCCGAAAAAAT
389 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
*
27705 TTTAAAAAATC-CTGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCCTG
454 TTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
*
27769 CCATGAAACTACACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* *
27834 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGGCTTACGC
583 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * *
27899 ATCCCGTCTCTCTGGCC-AGCGTAATGCCCGCCCGCCCACTCGCTCGTTTTGTCGGTTGGCTTAG
648 ATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCC-CGCACCCGCTCGTTTCGTCGGTTGGCTTAG
* ** * * * *
27963 GCATACGTAGTTCATTCCCAGTCTAAGATTTGATCAGACCAAGGGTT-TCGGCAACAAGATCGAC
711 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGT-GGCAGCAGGATCGAC
* * * * * ** *
28027 AGTACGCAGAGGGGGACCAGTCCGATCCCCAGCTTGCGCATTCCGCCCTTCTGGCCTACTGAACG
775 AGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * *
28092 CCCGCACGCTTGTTTCGTTGGTTGACTTAGGCATACAGAGTTCATTCCTAGTCTAA
840 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * *
28148 GCATACGGAGTTCATTCGTAGTCTAAGATTGGATCAGACCGCA-GGTTGCGGCAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCG-AGGGTTGCGGCAGCACATGCTGG
* * * *
28212 GCTCGGGCAAGTGCTGGTGCCACATTTTTCTTCATCGGGGCACCATCGCCAGAGCATCGCCGGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CGGAG
* * * * *
28277 AAACTGACCGGCGGCATTGGGGTTCCGGCGATCGAGGGGGCC-GAGGG-GTGCGTAGATGATGTG
129 AACCTGACCGGCGG-ATTGGGGTTCCGACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTG
*
28340 CGATGGGTGCTGGTACTTGGCCCTTATATT-GTCCCCTATCCCTCATCAAACCTCGAGAACTCAC
192 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
28404 ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT
257 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
28469 GGCGACACTTTTTTCAAATTGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTGAATTTTTTTT
322 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTT
* *
28534 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTC-AAAA
386 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * *
28598 AATTTTTAAAAAATC-CTGAACCGTAAAAAGATTGAAAAATCGTGAAAAAAAGAAAACAAGTCGT
451 AA-TTTTAAAAAATCTC-GAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
28662 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
514 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* *
28727 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
579 GCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
** * * ** * * * *
28792 AAGCATCCCGTCTCACTGGCCGGCACAGTG-CC-CACC-CACCCGCTAGTTTTGTCGGTTGCCTT
644 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCCGCACCCGCTCGTTTCGTCGGTTGGCTT
* ** * ** *
28854 AGGCATATGGAGTTCATTCCCAGTCTAAGATTGGACCATATTGAGGGTT-TCGGCAGTAGGATCT
709 AGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGT-GGCAGCAGGATC-
* * ** *
28918 G-TAGCACACAGAGGGGGACCCGGTTGATCCCCAGCTTGCGCATCCCGCCCCACTGGCCGGCTGA
772 GACAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
** * * *
28982 TTGCCCGCGCGCTCGTTTCGTGGTTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
837 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
29041 GCATATGGAGTTCATTCCCAGTCTAATATCGGGCTGGATCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * * * * *
29106 CTCAGGCATTTGCTGGTGTCGCATTTTTCTTCGTCGAGTCACCATCATCTGAGCATCACCGGAGA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATC-GCGGAGA
** * * * *
29171 ACCTGACCCCCGGCATTGGGGTTCCGGCGGTCGAGGGGGTCGGGGGGTGTGCACACATGATGTGC
130 ACCTGACCGGCGG-ATTGGGGTTCCGACGATCG-GGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
29236 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGAACTCACA
193 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
29301 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
258 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT-
* *
29366 GGGGACACTTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTG
322 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * *
29431 TGCATACCAACAAAAACACAAGGATCACATCTACCAAGTTTGGTGCTAAAACGCCTTCCGAAAAA
387 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* *
29496 ATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCTTGAAAAATAGAAAACGAGTCGTCTT
452 ATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * * *
29561 GCCATTAAACTTCACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAGGCCATAAAAATGACA
517 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
** * *
29626 TTGGCACACA-AATATATGAAGATTTGCCTAAACCCA-CAATCCACCCTATCGATCCACGGCTTG
582 TTGGCACGTAGAA-ATATGAAGATGTGCCTAAACCCACCTA-CCACCCTATCGATCCACGGCTTG
* * * * *
29689 CGCATCCCATCTGTCTGGTCGACGTAGTGCCCGACCACCCGCCCGCCCGTTCGCTCGTTTCATCG
645 CGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG--C-CCCG--C-ACC---CGCTCGTTTCGTCG
* * *
29754 GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCAGACTGAGGGTTGTGGCAGC
701 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGC
* * * * * * * * * *
29819 AAGATCGATAGCACCCAGAGAGGGACCCGGTCGATCCTCTGCTTGCTCATCCCACCCCACTGGCC
766 AGGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCC
* * * *
29884 GGCTGAGCGCCCGTACACTCGTTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCAATCTAA
831 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
*
29949 GCATACGGAGTTCATTCCAAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGAT
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----C---C---G----GA-C----
*** * *
30014 CGAGGGTTGCAATAGCACATGCTGGGCTCGGGCAAGTTCTGGTGCCACATTTTTCTTCGTCGGGG
40 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG
* * * * *
30079 CACCATCGCCAGAGCATCGTCGAAGAACCTGGCCGGCAGCATTGGGGTTCCGACGATCGAGGGGG
105 CACCATCGTCGGAGCATCG-CGGAGAACCTGACCGGC-GGATTGGGGTTCCGACGATCG-GGGGG
*
30144 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTTGCCCCCTAT
167 CCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTAT
* *
30209 CCTTCATCAAACCTCGAGAACTCACA-CCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGC
232 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
*
30273 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGACACAAAATCTTGTACACT
297 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
30338 TCGAGGTTTTAGCTGAATTTTTTTGTGCATGCGAACAAAAATACAAGGATCACGTCTACCAAGTT
362 TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTT
** * * * * * *
30403 T-GGGCCAAAACTCCTTTTGAAAAAGTCTTAAAAAATCTTGAACCGTAAAATGTTTTAAAAATCG
427 TGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCA
*
30467 TGAGAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
492 TGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT
* * *
30532 GAATTTACAAGCCATAAAAATGGCATTGGAATGTAGAAATATGAAGATGTGCCTAAACCCACCCA
557 GAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTA
*
30597 CCACCCTATCGATCCACGGCTTGCGGATCCCGTCTCTCTGGCCGACGTAGTGCCCGTCTGCCCGC
622 CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCG-C--CCCGC
* * * * ** * * *
30662 TCGCATGCTTGTTTCATTAGTTGGCTTAGCCATACGGAGTTCATTCCCAATCTAAGATTAGACCA
684 AC-C-CGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCA
* * * * * *
30727 GACTGAGGGTTGTGGCAGTAGGATCGACAGCATGTAGAGGGGGACCCGACCGATCCCTAGCTTGC
747 GACCGAGGGTTGTGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCAGCTTGC
* * * *
30792 GCATCCCGCCCTTCTAGCCGGCTGAGCGCCCGCACGCTTGTTTCGTGGGTTGAATTAGGCATACG
812 GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACG
30857 GAGTTCATTCCCAGTCTAA
877 GAGTTCATTCCCAGTCTAA
* * *
30876 GCATACGGAGTTTATTCCCAATCTAAGATCGGACCAGG-TCGAGGGTTGCGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACC-GGACCGAGGGTTGCGGCAGCACATGCTGG
** * * * *
30940 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCACCAACGCCAGAGCAT-GCCAGAG
65 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-CGGAG
* * * * *
31004 AACTTGACCGACGACATTAGGGTTCCGGCGATCGGGGGGGCCGGGGGGGTTGTGCGCACATGATG
129 AACCTGACCGGCG-GATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGG-TGTGCGCACATGATG
* * * *
31069 TACGATAGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATGAATCCTCGAGAACTC
190 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* *
31134 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAATGTGTCTAAA
255 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* *
31199 ATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTACGAGTTTTTAGCTGAATTTTTT
320 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * * **
31264 TGTGCATGCCAAAAAAAATAAAAGGATCACGTCTAGCAAGTTTGGGGCCGAAACTCATTTTGAAA
385 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * *
31329 AAGTATTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTC
450 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
*
31394 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * * * *
31459 CATTGGCATGCAGAAATAAGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCATGACTTG
580 CATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * *
31524 CGCATCTCGTCTCTCTGGCC-AGTGTAGTGCCCGCCCGCCCGCCCGCTTGTTTTGTCAGTTGGCT
645 CGCATCCCGTCTCTCTGGCCGA-CGTAGTGCCCGCCC-CGCACCCGCTCGTTTCGTCGGTTGGCT
* * ** * ** * * *
31588 TAGGCATATGGAGTTCATTCCCTGTCTAAGATTGGACCGGACCGAGGGTCATAGTAGCAAGATCG
708 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCG
* * * * * * * *
31653 ACAGCACACAGAGGGGAACCAGGTCGATCCCC-GACTTGCGCA--CTGCCCCTCTAGCCTGCTAA
773 ACAGCACGCAGAGGGGGACCCGGCCGATCCCCAG-CTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * * *
31715 GTGCCCGTAAGCTCG-TTCTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
837 GCGCCCGCACGCTCGTTTC-GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
31774 GCATACGGAGTTCATTCCCAGTCTAAGATCGAACCAGACCAAGGGTTACGACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
31839 CTTGGGCATGTGCTGGTGTCGCATTTTTCTTTGTC-GGGCACCA---T-----CAT--CGGAGAA
66 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCGGAGAA
* * * * * *
31893 CCTGACCGGCAGCATTGGGGTTCCGATGATCAAGGGGGCCGGGGGGTGTACGGACATGATGTGTG
131 CCTGACCGGC-GGATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * *
31958 ATGGGTGCTGGTAGTTGGCCCTTATATTGGCCCCCTTTCCCTCATCAAACCTAGAGAACTCACAC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
*
32023 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG-TGCCAGTAGCCATTGAAGTGTCTGAAATGG
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* *
32087 GGACACATTTTTCAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
324 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * ** * * *
32152 CATGCCAACAAAAATACAAGGATCACGTCTACCAACTTTAGGGCTGAAATTTCTTCC-CAAAAAT
389 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
* * * *
32216 TTTAGAAAAATCTCGAACCGCAAAAAGTTTCAAAAATAATGAAAAATGGAAAAGGAGTCGTCTTG
454 TTTA-AAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* * *
32281 CCATGAAACTTCATGTAAAGGCTTAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * * * * *
32346 TGGCACGCAGAAATATGAAGATGTACCTAAACCCAGCTGCCACCCAATTGATCCGCAGCTTGCGC
583 TGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * ** * * *
32411 ATCCCGTCTCTCTGGCCGACGTAGTGCCCACCCGCCCGCTCGCCCACTCATTTTTTTGATTGGCC
648 ATCCCGTCTCTCTGGCCGACGTAGTG----CCCGCCC-CGCACCCGCTCGTTTCGTCGGTTGGCT
* ** * *
32476 TAGGCTTACAAAGTTCATTCCCAATCTAAGATCAGACCAGATCGAGGGTT
708 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
32526 TCGGTAGCAC
Statistics
Matches: 10022, Mismatches: 1222, Indels: 467
0.86 0.10 0.04
Matches are distributed among these distances:
849 157 0.02
850 1 0.00
853 4 0.00
855 1 0.00
856 1 0.00
857 459 0.05
858 37 0.00
860 3 0.00
861 1 0.00
863 1 0.00
864 1 0.00
866 2 0.00
869 91 0.01
872 2 0.00
873 1 0.00
874 1 0.00
875 125 0.01
877 172 0.02
878 1 0.00
879 113 0.01
880 206 0.02
881 2 0.00
883 12 0.00
884 807 0.08
885 374 0.04
886 9 0.00
887 38 0.00
888 535 0.05
889 94 0.01
890 807 0.08
891 433 0.04
892 27 0.00
893 420 0.04
894 227 0.02
895 309 0.03
896 715 0.07
897 727 0.07
898 357 0.04
899 124 0.01
900 150 0.01
901 375 0.04
902 700 0.07
903 166 0.02
904 227 0.02
905 2 0.00
907 2 0.00
908 202 0.02
909 3 0.00
910 1 0.00
911 3 0.00
912 1 0.00
913 1 0.00
916 1 0.00
919 1 0.00
920 1 0.00
923 1 0.00
924 1 0.00
925 2 0.00
926 2 0.00
927 201 0.02
928 1 0.00
929 4 0.00
930 1 0.00
931 220 0.02
932 102 0.01
933 62 0.01
934 191 0.02
935 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (895 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCGGAGAA
CCTGACCGGCGGATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGAT
GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
TAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
CCGTCTCTCTGGCCGACGTAGTGCCCGCCCCGCACCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
CGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCACG
CAGAGGGGGACCCGGCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:22843 original size:26 final size:26
Alignment explanation
Indices: 22813--22865 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
22803 GTTGACTTAG
22813 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
22839 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
22865 G
1 G
22866 ATCAGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:23765 original size:26 final size:26
Alignment explanation
Indices: 23718--23767 Score: 75
Period size: 26 Copynumber: 1.9 Consensus size: 26
23708 AACTTAGGCT
*
23718 TACGGAGTTCATTCCTAGTCTAAGCA
1 TACGGAGTTCATTCCGAGTCTAAGCA
23744 TACGGAGTTCATTCCCGA-TCTAAG
1 TACGGAGTTCATT-CCGAGTCTAAG
23768 ATCGGACCGG
Statistics
Matches: 22, Mismatches: 1, Indels: 2
0.88 0.04 0.08
Matches are distributed among these distances:
26 19 0.86
27 3 0.14
ACGTcount: A:0.26, C:0.24, G:0.20, T:0.30
Consensus pattern (26 bp):
TACGGAGTTCATTCCGAGTCTAAGCA
Found at i:24641 original size:26 final size:26
Alignment explanation
Indices: 24605--24657 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
24595 GTTGACTTAG
* *
24605 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
24631 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
24657 G
1 G
24658 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:25520 original size:26 final size:26
Alignment explanation
Indices: 25490--25542 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
25480 GTTGACTTAG
* *
25490 GCATATGGAGTTCATTCACAGTCTAA
1 GCATACGGAGTTCATTCACAGACTAA
*
25516 GCATACGGAGTTCATTCCCAGACTAA
1 GCATACGGAGTTCATTCACAGACTAA
25542 G
1 G
25543 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCACAGACTAA
Found at i:28158 original size:26 final size:26
Alignment explanation
Indices: 28122--28174 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
28112 GTTGACTTAG
28122 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCTAGTCTAA
* *
28148 GCATACGGAGTTCATTCGTAGTCTAA
1 GCATACAGAGTTCATTCCTAGTCTAA
28174 G
1 G
28175 ATTGGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCTAGTCTAA
Found at i:29960 original size:26 final size:26
Alignment explanation
Indices: 29923--30001 Score: 124
Period size: 26 Copynumber: 3.0 Consensus size: 26
29913 GTTGACTTAG
*
29923 GCATACGAAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
29949 GCATACGGAGTTCATT-CCAAGTCTAA
1 GCATACGGAGTTCATTCCCAA-TCTAA
*
29975 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
30001 G
1 G
30002 ATCAGATCAG
Statistics
Matches: 49, Mismatches: 2, Indels: 4
0.89 0.04 0.07
Matches are distributed among these distances:
25 4 0.08
26 42 0.86
27 3 0.06
ACGTcount: A:0.30, C:0.25, G:0.18, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:30886 original size:26 final size:26
Alignment explanation
Indices: 30850--30902 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
30840 GTTGAATTAG
*
30850 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
30876 GCATACGGAGTTTATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
30902 G
1 G
30903 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:31777 original size:26 final size:26
Alignment explanation
Indices: 31748--31800 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
31738 GTTGACTTAG
31748 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
31774 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
31800 G
1 G
31801 ATCGAACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:33266 original size:26 final size:26
Alignment explanation
Indices: 33230--33282 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
33220 GTTGACTTAG
33230 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
33256 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
33282 G
1 G
33283 ATCAGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:34152 original size:25 final size:26
Alignment explanation
Indices: 34123--34174 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
34113 GTTGACTTAG
34123 GCATAC-GAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
34148 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
34174 G
1 G
34175 ATCGGCTCGG
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 6 0.23
26 20 0.77
ACGTcount: A:0.27, C:0.27, G:0.19, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:34609 original size:892 final size:887
Alignment explanation
Indices: 32800--35264 Score: 3266
Period size: 892 Copynumber: 2.8 Consensus size: 887
32790 AAGTTGGGAA
* * * * **
32800 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACAGTAAAATGTCTCAAAAATCATGAAAA
1 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAA
*
32865 ATATAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
66 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* *
32930 ACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCAAAACCCAGCTACCACCC
131 ACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* * * * *
32995 AATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTA--AT-GCCCGCCCGCTC-ATTA
196 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGGCTCGCCCGCCCGCTCGTTTA
* * *
33056 CGTCGGTTGGCTTAGGCATACGGAGTTTATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGTG
261 -GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG
* * * * *
33121 GTAGCAGAATTGGCAGCACGCAG-CGTGGGACCCGATCGATTCCCGACTTATGCATCCCATCCCT
325 GTAGCAGGATTGGCAGCACGCAGAAG-GGGA-CCG-GCGA-TCCCGGC-T-TGCATCCCACCCCT
* * ** *
33185 CTAGCTGACTGAGCGCCTGCACACTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
384 CTGGCCGACTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * * * **
33250 ATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCAGACCGAGGGTTGCGGCAGCAGTT
449 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGCTCGGACCGAGGGTTGCGGCAGCACAT
* * * ** *
33315 GCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCGC
514 GCTAGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGC
** * * * *
33380 CGGAGAACCTGACTTGCGGCATTAGGGTTTCGGTGATC-GGGGGGCC-AGGGGGTTTGCGCACAT
579 CGGAGAACCTGACAGGTGGCATTGGGGTTCCGGTGATCGGGGGGGCCGAGGGGGTGTGCGCACAT
* * * *
33443 GATGTGCGATGGGTGCTGGTACTTGGCCCGTATAATATCCCCCTATCCCTCATCAAACTTTGAGA
644 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACTTTCAGA
* *
33508 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTATTGCCAGTAGCCATTAAAGTGTC
709 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTACTGCCAGTAGCCATTAAAGTATC
*
33573 TAAAATGGGGACAATTTTTTAAAATGGTCATAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
774 TAAAATGGGGACAATTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
** * *
33638 TTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCTAACATGTTTGGGGT
839 TTTTTTGCATAACAAAAAAAATACAAGGATCACGTC--ACAAGTTTGGGGC
* *
33689 GAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAA
1 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAA
* * *
33754 ATAGAAAATGATTCGTCTTGCCATAAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
66 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* * * *
33819 ACAAGCCATAAAAATAGCATTGGCACACAAAAATATGAAGATGTGCCTAAACGCACCTACCACCC
131 ACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* *
33884 TATCAATCCACGGCTTGTGCATCCCGTCTCTCTGGCCGGTGTAGTGCTCGCCCGCCCGCTCGTTT
196 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAG-GCTCGCCCGCCCGCTCGTTT
* ** *
33949 AGTCGGTTGGCTTAGGCATACAGAGTTCATTCCTGGTCTAAGATCAGACCAGACCGAGGGTTGCA
260 AGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCG
* * *
34014 GCAGCAGGATCGGCAGCACGCAGAAGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCGCCCCTC
325 GTAGCAGGATTGGCAGCACGCAGAAGGGGACC-GG-CGAT-CCCGGCTT--GCATCCCACCCCTC
* **
34079 TGGCCGACTGAGCGCCCCCACGCTCGTTTCATGGGTTGACTTAGGCATAC-GAGTTCATTCCCAG
385 TGGCCGACTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* *
34143 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGCTCGGACCAAGGGTTGCGACAGCACATG
450 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGCTCGGACCGAGGGTTGCGGCAGCACATG
*
34208 CTAGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATC-TCTGGAGCATCAC
515 CTAGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCATC-GGAGCATCGC
*
34272 CGGAGAACCTGA-ACGGTGGCATTGGGGTTCCGGTGATCGGGGGGGCCGGGGGGGTGTGCGCACA
579 CGGAGAACCTGACA-GGTGGCATTGGGGTTCCGGTGATCGGGGGGGCCGAGGGGGTGTGCGCACA
* * * *
34336 TGATGTGTGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATTCCTCATCAAAGC-TTCA
643 TGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAA-CTTTCA
* * *
34400 GAACTCACACCCCCTTAAGGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTA
707 GAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTACTGCCAGTAGCCATTAAAGTA
* * * * *
34465 TCTGAAATGGGGACATTTTTTTCAAATGGTTACAAAATCTTGTACACTTTGAGTTTTTAGCTGAA
772 TCTAAAATGGGGACAATTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA
* *
34530 TTTTTTTGTGCATAACAAAAACAATACAAGGATGACGTC-CAAGTTTGGGGC
837 TTTTTTT-TGCATAACAAAAAAAATACAAGGATCACGTCACAAGTTTGGGGC
* * **
34581 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAATCGTAAAAAGTTTTGAAAATTGTGAAAA
1 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAA
*
34646 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTA
66 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
* *
34711 ACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
131 ACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
* * * *
34776 TATCGATCCACGACTTGCGCATCCTGTCTCTCTGACCGACGTTGT-GCCCGCCCGCCCGTTCGCC
196 TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG--G-TGTAG---GCTCGCCCG--C-CC
* * * *
34840 GCTCGTTTCGTCGGTTGGCTTAGGCATATGGAGTTCATTCCCCAGTCTAAGATCGGACTAGACCG
252 GCTCGTTTAGTCGGTTGGCTTAGGCATACGGAGTTCATT-CCCAGTCTAAGATCAGACCAGACCG
* * * * * * *
34905 AGGGTTGGGGTAGCAAGATTGACAGCAGGCAGAGGGGGATCGG-G---CC-G-AT-CATCCCACC
316 AGGGTTGCGGTAGCAGGATTGGCAGCACGCAGAAGGGGACCGGCGATCCCGGCTTGCATCCCACC
*
34963 CCTCTGGCCGACTGAGCGCCCACACGCTCATTTTGTGGGTTGACTTAGGCATACGGAGTTCATTC
381 CCTCTGGCCGACTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTC
* * ** *
35028 CCAGTCTAAGCATAC-GAGTTCTTTCCCAGTCTAGGATCGGAC-CGGACCGAGGGTAACGGTAGC
446 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGG-CTCGGACCGAGGGTTGCGGCAGC
* * * * * *
35091 ACATGC-CGAGCTCGAGCATGTGCTGGTGCCGTATTTTTTTTTGTCGAGGTACCATCATCGGAGC
510 ACATGCTAG-GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCATCGGAGC
* ** *
35155 ATCGTCGGAGAACCTGACAGGTGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGAGGGTGTGCG
574 ATCGCCGGAGAACCTGACAGGTGGCATTGGGGTTCCGGTGATCGGGGGGGCCGAGGGGGTGTGCG
* * *
35220 CCCATGATATACGATGGGTGCTGGTACTTGGCCCTTATATTAGCC
639 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCC
35265 TAGGCATACG
Statistics
Matches: 1382, Mismatches: 163, Indels: 63
0.86 0.10 0.04
Matches are distributed among these distances:
887 1 0.00
888 246 0.18
889 244 0.18
891 4 0.00
892 386 0.28
893 167 0.12
894 200 0.14
895 31 0.02
896 8 0.01
897 1 0.00
898 1 0.00
899 40 0.03
900 53 0.04
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (887 bp):
CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAA
ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
ACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCC
TATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGGCTCGCCCGCCCGCTCGTTTA
GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGG
TAGCAGGATTGGCAGCACGCAGAAGGGGACCGGCGATCCCGGCTTGCATCCCACCCCTCTGGCCG
ACTGAGCGCCCACACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
CATACGGAGTTCATTCCCAGTCTAAGATCGGCTCGGACCGAGGGTTGCGGCAGCACATGCTAGGC
TCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCGCCGGAGAA
CCTGACAGGTGGCATTGGGGTTCCGGTGATCGGGGGGGCCGAGGGGGTGTGCGCACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACTTTCAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTACTGCCAGTAGCCATTAAAGTATCTAAAATG
GGGACAATTTTTTAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTG
CATAACAAAAAAAATACAAGGATCACGTCACAAGTTTGGGGC
Found at i:35053 original size:25 final size:26
Alignment explanation
Indices: 35011--35060 Score: 84
Period size: 25 Copynumber: 2.0 Consensus size: 26
35001 GTTGACTTAG
35011 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
35037 GCATAC-GAGTTCTTTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
35061 GGATCGGACC
Statistics
Matches: 23, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
25 17 0.74
26 6 0.26
ACGTcount: A:0.24, C:0.28, G:0.18, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:36167 original size:26 final size:26
Alignment explanation
Indices: 36137--36190 Score: 92
Period size: 26 Copynumber: 2.1 Consensus size: 26
36127 TGGGTTGACT
36137 TAGGCATAC-GTAGTTCATTCCCAGTC
1 TAGGCATACAG-AGTTCATTCCCAGTC
36163 TAGGCATACAGAGTTCATTCCCAGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
36189 TA
1 TA
36191 AGATCGGACC
Statistics
Matches: 27, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 26 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.30
Consensus pattern (26 bp):
TAGGCATACAGAGTTCATTCCCAGTC
Found at i:37069 original size:26 final size:26
Alignment explanation
Indices: 37033--37085 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
37023 GTTGACTTAG
37033 GCATATAGAGTTCATTCCCAGTCTAA
1 GCATATAGAGTTCATTCCCAGTCTAA
*
37059 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATAGAGTTCATTCCCAGTCTAA
37085 G
1 G
37086 ATCGGCCAGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.23, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATATAGAGTTCATTCCCAGTCTAA
Found at i:37632 original size:26 final size:26
Alignment explanation
Indices: 37596--37648 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
37586 GTTGGCTTAG
*
37596 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
37622 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
37648 G
1 G
37649 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:38378 original size:26 final size:27
Alignment explanation
Indices: 38339--38390 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 27
38329 CGGTGTTCAG
* *
38339 GCATATCGGAGTTCATTCCTAGTCTAA
1 GCATATCGAAGTTCATTCCCAGTCTAA
38366 GCATA-CGAAGTTCATTCCCAGTCTA
1 GCATATCGAAGTTCATTCCCAGTCTA
38391 TGATCGGACC
Statistics
Matches: 23, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
26 18 0.78
27 5 0.22
ACGTcount: A:0.27, C:0.25, G:0.17, T:0.31
Consensus pattern (27 bp):
GCATATCGAAGTTCATTCCCAGTCTAA
Found at i:39418 original size:26 final size:26
Alignment explanation
Indices: 39389--39441 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
39379 GTTGACTTAG
39389 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
39415 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
39441 G
1 G
39442 ATCGGATCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:39916 original size:902 final size:883
Alignment explanation
Indices: 37622--40882 Score: 3875
Period size: 902 Copynumber: 3.7 Consensus size: 883
37612 CCCAGTCTAA
* *
37622 GCATACGGAGTTCATTCCCAATCTAAGATCGGA-CCA--GACC-G---AA-GGTTGCAGCAGCAC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCCAGTGACCAGACCAAGGGTTACAGCAGCAC
* * ** * ** * **
37679 ATGTTGGGCTCAGGCATGTGCTGGT-ACTGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCAT
66 ATGCTAGGCTTGGGCATGTGCTGGTGTCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCAT
* * * * * *
37743 CGCCGGATAACCTGATC-ATTGGCGTTGGGGTTCCGGCGATC-GGGGAGGCCGGGGGGTGTGCGC
131 C-AC-GAGAACCTGATCGA-CGGCATTGGGGTTCCGACGATCAGGGG-GGCCGGGGGGTGTGCAC
* * * *
37806 ACATGATGTACGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAAACTC
192 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAAACCTC
* * *
37871 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTTCCAGTACCCATTAAAG
257 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAG
*
37936 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGGGTTTTTAGCTG
322 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
38001 AATTTTTTTGTGCATGCCAACAAAAATGA-AAGGATCACGTCTACCACGTTTGGGGTCAAAACTC
387 AATTTTTTTGTGCATGCCAACAAAAAT-ACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
* **
38065 CTTCTGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATTGTGAAAAATAGAAAA
451 CTTCTGAAAAAATTTTAAAAAATCCCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAGAAAA
38130 CGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
515 CGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCA
*
38195 TAAAAATGGCATTGGCAGGTAGAAATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATC
580 TAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTA-CACCCTATCGATC
* * * * *
38260 CACGACTTGCGCATCCCGTCTCTCTGGTGCGACGTAGTGCCCGCCTGCCCGCCCGCCCGATCGTT
644 CACGGCTTGCGCATCCCGTCTCTCTAG-CCGACGTAG-G--TGCCTGCCCGCCCGCCC-A-C-CT
* *
38325 TCGTCGGTGTTCAGGC-ATATCGGAGTTCATTCCTAGTCTAAGCATACGAAGTTCATTCCCAGTC
702 GC-TC-GT-TTC-GTCGAT-T--G-G--C--T--TA---T--GCATACGAAGTTCATTCCCAGTC
* * * * * * *
38389 TATGATCGGACCGAACTGAGGG-TGTGGCAGTAGGATC-GACAGCACGCAGAAGGGGACCCGGCC
748 TAAGATCGGACCGGACTGAGGGTTATGGTAGCAGGATCAG-CAGCACGCAGAGGGGGACCCGACC
* * * * * * *** *
38452 GATCCTCGGCTTGCGCGTCCCGCCCCTCCGACCGGCTGAGTGCCCGCACTCTCGTTTCACAGTTT
812 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGTGCCCGCACGCTCGTTTCGTGGGTT
38517 GACTTAG
877 GACTTAG
* * * **
38524 GTATACGGAGTTCATTTCCAGTCT---AT--GAT-CA-T-ACCAGACCGAGGGTTATGGCAGCAC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCCAGTGACCAGACCAAGGGTTACAGCAGCAC
* * * * * *
38581 ATGCTGGGCTTGGGCATGAGCTGCTG-CCTCATTTTTCCTCGTCGGGGCACC--C-TC---G--T
66 ATGCTAGGCTTGGGCATGTGCTGGTGTCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCAT
* * * * * *
38637 C-GGAGAACCTGACCGACAGCATTGGGGTTTCGACGATCAGGGGGGCCGGGGGGTGTTCGCACAT
131 CACGAGAACCTGATCGACGGCATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCACACAT
** *
38701 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTTTCCCCCTATCCCTAATCAAACCTCAAGA
196 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAAACCTCGAGA
38766 ACTCACACCCCCTTAAA-AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTC
261 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTC
*
38830 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATT
326 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * * * *
38895 TTTTTGTGCTTGCCAACAAAAATTCAAGGATCATGTCTATCAAGTTTGGGGCCAAAACTTCTTCC
391 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT
* * *
38960 GAAAAAATTTTAAAAAATCCTGAAGCGTAAAAGGTTTCAAAAATCATGAAAAATAGAAAACGAGT
456 GAAAAAATTTTAAAAAATCCCGAA-CCTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
*
39025 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
520 CATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* *
39090 ATGGCATTGGCACGTAGAAATATAAAGATGTGCCTAAACCCACCTACCACCTTATCGATCCACGG
585 ATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTA-CACCCTATCGATCCACGG
* * **
39155 CTTGCGCATCCCATCTCTCTAGCCGGCG-AGGTGCCTGCCCGTTCGCCCACCTGCTCGTTTCGTC
649 CTTGCGCATCCCGTCTCTCTAGCCGACGTAGGTGCCTGCCCGCCCGCCCACCTGCTCGTTTCGTC
* *
39219 GATTGGCTTATGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGACTGAGGGTTATGGTAG
714 GATTGGCTTATGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTATGGTAG
* * * **
39284 CAGGATCAGCAGCACGCAGAGGGGGACTCGACTGATCCCCAGCTTGCGCATCTTGCCCCTCTGGC
779 CAGGATCAGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGC
* * *
39349 CGACTGAGCGCCCGTACGCTTGTTTCGTGGGTTGACTTAG
844 CGACTGAGTGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
39389 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A-T-CCAG--T--GA-C----CAGAC
* * * * *
39454 CAAGGGTTACAACTGCACATGCTAGACTTGGGCATGTGCTGGTGT-CACGTTTTTCTTCACCGGG
48 CAAGGGTTACAGCAGCACATGCTAGGCTTGGGCATGTGCTGGTGTCCACATTTTTCTTCATCGGG
* * * ** *
39518 GCACCATCGTCGGAGTATCATCGAAGAA-CTGATCGACGGTATTAGGGTTCCGGTGATCAGTGGG
113 GCACCATCGTCGGAGCATCA-CG-AGAACCTGATCGACGGCATTGGGGTTCCGACGATCAGGGGG
* * *
39582 GCCGGGGGGTGTGCACACATGATGTGTGATGGATGCTGGTACTTGGCCCCTATATTGGCCCCCTA
176 GCCGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* *
39647 TCCCTAATCAAACCTCGAGAACTCACACCCCCATAAAGAGCATCTGAGATTTTACAGGTTTGCTG
241 TCCCTAATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
*
39712 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
306 CCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * * * * *
39777 TTTGAGTTTTTAGCTGCATTTTTTTGTGCAAGCCAACAAAAATACGAGGATCATGTGTACCAAGT
371 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
**
39842 TTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCGAACCTCAAAAAGTTTTGAAAATC
436 TTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCCGAACCT-AAAAAGTTTCAAAAATC
* * * * * *
39907 TTAAAAAATAGAAAACGAGTCGTGTCGCCATGAAACTTCACGTGAAGGCTTAAGGGACCACTGTA
500 ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* * * ** * *
39972 TGAATTTACAAGGCATAAAAGTGACATTGGCACACAGAAATATGAAGATGTGCCGAAACTCACCT
565 TGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCT
* * * * * * **
40037 AGACCCTATCGATCCATGGCTTGCGTATCCCGTCTCACTAGTCGTCGTA-GTGCCCACCCGCCCG
630 ACACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTAGCCGACGTAGGTGCCTGCCCGCCCG
* * * * * * * *
40101 CCCGCCTGCTCGTTTCATCGGTTGGCTTAGGCAAACGAAGTTAATTCCCAGTCTAAGATCAGATC
695 CCCACCTGCTCGTTTCGTCGATTGGCTTATGCATACGAAGTTCATTCCCAGTCTAAGATCGGACC
* * * * *
40166 GGACAGAGGGTTGCT-GTAGCAAGATCGGCAGCATGCAGAGGGGGACCCGACCGATCCCCGGCTT
760 GGACTGAGGGTT-ATGGTAGCAGGATCAGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTT
* * * *
40230 ACGCATTCTGCCCCTCTGGCCGACCGAGTGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
824 GCGCATCCCGCCCCTCTGGCCGACTGAGTGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
* * *
40290 GCATACGGAGTTCATTCCCAATCTAAGATCGGA-CC-G-GACC-G----AGGGCTGCAGCAGCAC
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCCAGTGACCAGACCAAGGGTTACAGCAGCAC
* * *
40347 ATGCTAGGCTAGGGCATGTGCTGGT-TCCACACTTTTCTTCATCGGGGCACGATCGTCGGAGCAT
66 ATGCTAGGCTTGGGCATGTGCTGGTGTCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCAT
* * *
40411 CACTGCAGAACCTGAACGACGGCATTGGGGTTCCAACGATCGGGGGGGCCGGGGGGGCGTGTGCA
131 CAC-G-AGAACCTGATCGACGGCATTGGGGTTCCGACGATCAGGGGGGCC--GGGGG-GTGTGCA
* * *
40476 CACATGATCTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCAAACCT
191 CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAAACCT
40541 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAA
256 CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAA
* *
40606 GTGTCTAAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
321 GTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT
** *
40671 GAATCGTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATC
386 GAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC
* * *
40736 CTT-TCGAAAAAATTTAAAAAAATCTCGAACCGTAAAAGGTTTCAAAAATCATGAAAAATAGAAA
451 CTTCT-GAAAAAATTTTAAAAAATCCCGAACC-TAAAAAGTTTCAAAAATCATGAAAAATAGAAA
* * ** *
40800 ACGAGTCATCTTGCCATGAAACTTAATGTGAAGGCTTAAGGGACCATTGTACAAATTTACAAGCA
514 ACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
40865 ATAAAAATGGCATTGGCA
579 ATAAAAATGGCATTGGCA
40883 TGCAAAGGGG
Statistics
Matches: 2038, Mismatches: 256, Indels: 153
0.83 0.10 0.06
Matches are distributed among these distances:
864 41 0.02
865 110 0.05
866 2 0.00
869 4 0.00
871 1 0.00
873 1 0.00
874 3 0.00
875 75 0.04
876 32 0.02
877 1 0.00
878 10 0.00
879 377 0.18
880 6 0.00
881 2 0.00
882 2 0.00
883 2 0.00
884 2 0.00
885 16 0.01
886 1 0.00
887 2 0.00
888 2 0.00
889 4 0.00
890 365 0.18
891 184 0.09
892 5 0.00
893 1 0.00
894 5 0.00
896 1 0.00
897 9 0.00
898 2 0.00
899 6 0.00
900 3 0.00
901 362 0.18
902 399 0.20
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (883 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCCAGTGACCAGACCAAGGGTTACAGCAGCAC
ATGCTAGGCTTGGGCATGTGCTGGTGTCCACATTTTTCTTCATCGGGGCACCATCGTCGGAGCAT
CACGAGAACCTGATCGACGGCATTGGGGTTCCGACGATCAGGGGGGCCGGGGGGTGTGCACACAT
GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTAATCAAACCTCGAGA
ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTC
TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT
GAAAAAATTTTAAAAAATCCCGAACCTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
ATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
TGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACACCCTATCGATCCACGGCT
TGCGCATCCCGTCTCTCTAGCCGACGTAGGTGCCTGCCCGCCCGCCCACCTGCTCGTTTCGTCGA
TTGGCTTATGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTATGGTAGCA
GGATCAGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCG
ACTGAGTGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
Found at i:41010 original size:26 final size:26
Alignment explanation
Indices: 40974--41026 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
40964 GTTGACTTAG
*
40974 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
41000 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
41026 G
1 G
41027 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:42784 original size:26 final size:26
Alignment explanation
Indices: 42734--42786 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
42724 TTTGACTTAG
* *
42734 GCATACGGAGTTCAATCCTAGTCTAA
1 GCATACGGAGTTCAATCCCAATCTAA
*
42760 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCAATCCCAATCTAA
42786 G
1 G
42787 ATCGGACCGA
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCAATCCCAATCTAA
Found at i:43173 original size:883 final size:891
Alignment explanation
Indices: 41864--43506 Score: 2455
Period size: 883 Copynumber: 1.8 Consensus size: 891
41854 TTAACTTAGC
* * * * * *
41864 CATACGGAGTTTATTCCCAGCCTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGG
1 CATACGGAGTTCATTCCCAACCTAAGATCGGACCGAACCGAAGGTTGCGGCAGCACATGCTGGGC
*
41929 TCGGGCATGTGCTGGTGTCGCATTTTTCTTCACTGGGGCACCATCACTGGAGCATCGCTGGAGAA
66 TCGGGCATGTGCTGGTGTCGCATTTTTCTTCACCGGGGCACCAT-AC--G-G-ATC-CTGGAGAA
* * **
41994 CCTGACCGGCGGCATTGGGGTTCAGGCGATCGGGGGGCCCGGAGGGTGTTGTGTGCACATGATGT
125 CCTGACCGGCAGCATTGGGGTTCAGACGATCGGGGGGCCCGGAGGGTGTTGTACGCACATGATGT
* * * *
42059 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCAGCAAACCTTGTGAACTCA
190 GCGATGGGTGCGGGTACTTGGCCCTTATAGTGGCCCCCTATCCCTCAGCAAACCTCGAGAACTCA
42124 CACCCCCTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAATGTCTAAAA
255 CACCCCCTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAATGTCTAAAA
* * *
42189 CGAGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGGGGTTTTAGCTGAATTTTTTT
320 CGAGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGGTTTTAGCTGAATTTTTTT
* * *
42254 GTGCATGCCAACAAAAATAAAAGGATAACGTCTACCAAGTTTGAGGCCAAAACACCATTC-GAAA
385 GTGCATGCCAAAAAAAACAAAAGGATAACATCTACCAAGTTTGAGGCCAAAACACC-TTCTGAAA
* * * * *
42318 AATTTTAAAAAATCCCGAACCTTAAAATGTTTTGAAAATCATGAAAAATAGAAAACGGGTCGTCT
449 AAATTTAAAAAATCCCAAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * *
42383 TGCCCTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATCTA-TTTACAAGATATAAAAATGG
514 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTAT-GAGTTTACAAGACATAAAAATGG
* *
42447 CATTGGCATGTAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
578 CATTGGCAGGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
*
42512 CGCATCCCGTCCCTCTTGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTC-ATCGGTTGGCTTAGG
643 CGCATCCCGTCCCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGA-CGGTTGGCTTAGG
* *
42576 CATACGGAGTTCATTCCTAGTCTAACATTGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGTAG
707 CATACGGAGTTCATTCCCAGTCTAACATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGTAG
42641 TACGTAGTGGGGGAACCGGCTGATCCCCCGCTTGCGCATCCTGCCCCTCTGGCCGGCTTAGCGCC
772 TACGTAGTGGGGGAACCGGCTGATCCCCCGCTTGCGCATCCTGCCCCTCTGGCCGGCTTAGCGCC
42706 CGTACGTTTGTTTCGTGGTTTGACTTAGGCATACGGAGTTCAATCCTAGTCTAAG
837 CGTACGTTTGTTTCGTGGTTTGACTTAGGCATACGGAGTTCAATCCTAGTCTAAG
* * *
42761 CATACGGAGTTCATTCCCAATCTAAGATCGGACCGAATCGAAGGTTGCGGCAGTACATGCTGGGC
1 CATACGGAGTTCATTCCCAACCTAAGATCGGACCGAACCGAAGGTTGCGGCAGCACATGCTGGGC
**
42826 TCGGGCATGTGCTGGTG-CGGCATTTTTCTTTGCCGGGGCACCAT-C-G-T-C-GGAGAACCTGA
66 TCGGGCATGTGCTGGTGTC-GCATTTTTCTTCACCGGGGCACCATACGGATCCTGGAGAACCTGA
* ** *
42885 CCGGCAGCATTGGGGTTCCGACGATCGGGGGGGTCGG-GGG-G-TGTACGCCCATGATGTGCGAT
130 CCGGCAGCATTGGGGTTCAGACGATCGGGGGGCCCGGAGGGTGTTGTACGCACATGATGTGCGAT
* *
42947 GGGTGCGGGTACTTGGTCCTTATAGTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
195 GGGTGCGGGTACTTGGCCCTTATAGTGGCCCCCTATCCCTCAGCAAACCTCGAGAACTCACACCC
* * * * * *
43012 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGCGG
260 CCTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAATGTCTAAAACGAGG
* * **
43077 ACAGTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGTTTTTAGCTGAATTTTTTTGTGTG
325 ACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGGTTTTAGCTGAATTTTTTTGTGCA
* * * *
43142 TGCCAAAAAAAACACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTT
390 TGCCAAAAAAAACAAAAGGATAACATCTACCAAGTTTGAGGCCAAAACACCTTCTGAAAAAATTT
* * *
43207 AAAAAATCCTAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATATAAAACGAGTCGTCTTGCCAT
455 AAAAAATCCCAAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAT
*
43272 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGCCATAAAAATGGCATTGGC
520 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGACATAAAAATGGCATTGGC
* *
43337 AGGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTTGCGCATCC
585 AGGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
** * * *
43402 CGTCTGTCTGGCCGGTGTAGTGCCCGCCCGTCCGCTTGTTTCGACGGTTGGCTTAGGCATACGGA
650 CGTCCCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGACGGTTGGCTTAGGCATACGGA
* * *
43467 GTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGC
715 GTTCATTCCCAGTCTAACATCGGACCAGACCGAGGGTTGC
43507 GGTAGCACAT
Statistics
Matches: 669, Mismatches: 73, Indels: 22
0.88 0.10 0.03
Matches are distributed among these distances:
882 4 0.01
883 517 0.77
884 2 0.00
885 3 0.00
886 43 0.06
887 1 0.00
889 1 0.00
891 1 0.00
895 1 0.00
896 1 0.00
897 95 0.14
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
CATACGGAGTTCATTCCCAACCTAAGATCGGACCGAACCGAAGGTTGCGGCAGCACATGCTGGGC
TCGGGCATGTGCTGGTGTCGCATTTTTCTTCACCGGGGCACCATACGGATCCTGGAGAACCTGAC
CGGCAGCATTGGGGTTCAGACGATCGGGGGGCCCGGAGGGTGTTGTACGCACATGATGTGCGATG
GGTGCGGGTACTTGGCCCTTATAGTGGCCCCCTATCCCTCAGCAAACCTCGAGAACTCACACCCC
CTGAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAATGTCTAAAACGAGGA
CACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCGAGGTTTTAGCTGAATTTTTTTGTGCAT
GCCAAAAAAAACAAAAGGATAACATCTACCAAGTTTGAGGCCAAAACACCTTCTGAAAAAATTTA
AAAAATCCCAAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAGTTTACAAGACATAAAAATGGCATTGGCA
GGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
GTCCCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGACGGTTGGCTTAGGCATACGGAG
TTCATTCCCAGTCTAACATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGTAGTACGTAGTG
GGGGAACCGGCTGATCCCCCGCTTGCGCATCCTGCCCCTCTGGCCGGCTTAGCGCCCGTACGTTT
GTTTCGTGGTTTGACTTAGGCATACGGAGTTCAATCCTAGTCTAAG
Found at i:45947 original size:26 final size:25
Alignment explanation
Indices: 45917--45968 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 25
45907 GTTGACTTAG
45917 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATT-CCAGTCTAA
*
45943 GCATACGGAGTTCATTCGAGTCTAA
1 GCATACGGAGTTCATTCCAGTCTAA
45968 G
1 G
45969 ATCAAACCGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 9 0.36
26 16 0.64
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCAGTCTAA
Found at i:46855 original size:25 final size:26
Alignment explanation
Indices: 46820--46871 Score: 97
Period size: 25 Copynumber: 2.0 Consensus size: 26
46810 GTTGACTTAC
46820 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
46846 GCATA-GGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
46871 G
1 G
46872 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 21 0.81
26 5 0.19
ACGTcount: A:0.27, C:0.25, G:0.21, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:47318 original size:26 final size:26
Alignment explanation
Indices: 47280--47350 Score: 115
Period size: 26 Copynumber: 2.7 Consensus size: 26
47270 AAAAATACGG
* *
47280 AGTTTATTACCAGTCTAAGCATATGA
1 AGTTAATTCCCAGTCTAAGCATATGA
47306 AGTTAATTCCCAGTCTAAGCATATGA
1 AGTTAATTCCCAGTCTAAGCATATGA
*
47332 AGTTCATTCCCAGTCTAAG
1 AGTTAATTCCCAGTCTAAG
47351 ATCGGACCAG
Statistics
Matches: 42, Mismatches: 3, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 42 1.00
ACGTcount: A:0.32, C:0.20, G:0.15, T:0.32
Consensus pattern (26 bp):
AGTTAATTCCCAGTCTAAGCATATGA
Found at i:47735 original size:476 final size:478
Alignment explanation
Indices: 46828--47741 Score: 1388
Period size: 476 Copynumber: 1.9 Consensus size: 478
46818 ACGCATACGG
* *
46828 AGTTCATTCCCAGTCTAAGCATAGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTG
1 AGTTAATTCCCAGTCTAAGCATAGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTG
* * * * ** *
46893 CGGCAGCACATGCTGGGCTTGGGCATGTGTTGGTGCCACATTTTTCTTCGTTGGGGGCACTATCG
66 CGACAACACATGCTAGGCTCGGGCATGTGTTGGTGCCACATTTTTCTTCGTTCAGGGCACCATCG
* * *
46958 TCGAAGAACTTGACCGACGGCATTGGGTTTCCGATGATCGGGGGGCCGAGGGGGTGTGCGCACAT
131 TCGAAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGAGGGGGTGTGCGCACAT
* * *
47023 GATGTGCGATGGGTGCGGGTACTTGGCCCTTATATTGGCCCCATATCCCTCATCAATCCTCGAGA
196 GATATGCGATGGGTGCGGATACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGA
* * *
47088 ACTCACACCCCCTTAAAAAGCATTTGAGATTTTAGAGATTGGTTGCCAGTAGCCATAAAAGTGTC
261 ACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGATTGGCTACCAGTAGCCATAAAAGTGTC
*
47153 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
326 TGAAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* *
47218 TTTTTATGCATGCCAACAAAAATACAAGGATCCCGTCTACCAAGTTTGCACCAAAAATACGGAGT
391 TTTTTATGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGCACCAAAAATACGGAGT
47283 TTATTACCAGTCTAAGCATATGA
456 TTATTACCAGTCTAAGCATATGA
* *
47306 AGTTAATTCCCAGTCTAAGCATATGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
1 AGTTAATTCCCAGTCTAAGCATA-GAAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTT
* * * * **
47371 GTGACAATAGATGTTAGGCTCGGGCATGTGCTT-GTGCTGCATTTTTCTTCG-TCAGGGCACCAT
65 GCGACAACACATGCTAGGCTCGGGCATGTG-TTGGTGCCACATTTTTCTTCGTTCAGGGCACCAT
* *
47434 CGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCG-GGGGGTGTGCGCAC
129 CGTCGAAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGAGGGGGTGTGCGCAC
* * *
47498 ATGATATGCGATGGGTGCTGATAGTTGGCCCTTATATTGG-CCCACTATCTCTCATCAAACCTCG
194 ATGATATGCGATGGGTGCGGATACTTGGCCCTTATATTGGCCCCA-TATCCCTCATCAAACCTCG
* * * * *
47562 AGAACTCACA-CCCCTTAAAGAGCATTTGAGGTTTTACAGGTTTGCTACCAGTAGCCATTAAAGT
258 AGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGATTGGCTACCAGTAGCCATAAAAGT
*
47626 GTCTGAAATGGGGACATTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
323 GTCTGAAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
47691 CTTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTG
388 ATTTTTTTATGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTG
47742 GGGCCAAAAC
Statistics
Matches: 391, Mismatches: 42, Indels: 8
0.89 0.10 0.02
Matches are distributed among these distances:
476 160 0.41
477 77 0.20
478 76 0.19
479 76 0.19
480 2 0.01
ACGTcount: A:0.25, C:0.22, G:0.25, T:0.28
Consensus pattern (478 bp):
AGTTAATTCCCAGTCTAAGCATAGAAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTG
CGACAACACATGCTAGGCTCGGGCATGTGTTGGTGCCACATTTTTCTTCGTTCAGGGCACCATCG
TCGAAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGAGGGGGTGTGCGCACAT
GATATGCGATGGGTGCGGATACTTGGCCCTTATATTGGCCCCATATCCCTCATCAAACCTCGAGA
ACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGATTGGCTACCAGTAGCCATAAAAGTGTC
TGAAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
TTTTTATGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGCACCAAAAATACGGAGT
TTATTACCAGTCTAAGCATATGA
Found at i:49087 original size:26 final size:26
Alignment explanation
Indices: 49058--49110 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
49048 GTTGACTTAG
**
49058 GCATACGAAGTTTGTTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
49084 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
49110 G
1 G
49111 ATCATACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:49358 original size:893 final size:888
Alignment explanation
Indices: 47306--52188 Score: 5802
Period size: 881 Copynumber: 5.6 Consensus size: 888
47296 AAGCATATGA
* * *
47306 AGTTAATTCCCAGTCTAAGCATATGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
1 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * ** * * * * * *
47371 GTGACAATAGATGTTAGGCTCGGGCATGTGCTTGTGCTGCATTTTTCTTCGTCAGGGCACCAT--
66 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
47434 -C---G--TCG---GAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGT
131 CCGGAGCATCGCCAGAGAACCTGACC-GCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGT
* * * *
47490 GTGCGCACATGATATGCGATGGGTGCTGATAGTTGGCCCTTATATTGG-CCCACTATCTCTCATC
195 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCC-CTATCCCTCATC
* *
47554 AAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGGTTTTACAGGTTTGCTACCAGTAGCC
259 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
* *
47618 ATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTAACAAAATCTTGTACACTTCGAGTTT
324 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* *
47683 TTAGCTGACTTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCA
389 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * **
47748 AAACTCCTTCCGAAAAAAA-TTTAAAAAATCTCGAACCGCAAAAAGTTTGGAAAATCATGAAAAA
454 AAACTCCTTCC-AAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAA
* *
47812 TAGAAAACGAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGGAACATTGTATGAATTTA
518 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * * ** *
47877 AAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAATGCACCAACCACCCT
583 CAAGCCATAAAAATGGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * * *
47942 ATCAATCCACGGCCTACGCATCCCGTCTCTCTAGCCGGTGTAGTGCCCGCCCGCCCGCCTGCTCA
648 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT--------GCCCGCCTGCTCG
* * * * * *
48007 TTTCGTTGGTTGGCTTAGACATACGGAGTTCATTCCCAGTCTCAGATCTGATCGAACCGAGGGTT
705 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTT
* * * *
48072 GCGACAGCAGGATC-G--ACA-GCACAT----A---GA--G-----GACTTGCACATCCCGCCTC
770 GCGACAGCAGGATCGGCAACACGCAAATGGGGACCCGACCGATCCCGGCTTGCGCATCCCGCCCC
* ** * * *
48119 TCTGGCCTG-TCGAGCGCCTACACGATCGTTTCGTGGGTTGACTTAGGCATATGG
835 TCTGGCCGGCT-GAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
* * *
48173 AGTTCATTCCCAATCTAAGGATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
1 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * ** * **
48238 -CTGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGTCATATTTTTCTACCCCGGGGCACCATC
66 GC-GGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC
* *
48302 ACCGGAGCATTGCCAGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGAGGGGGCCGGGAG
130 GCCGGAGCATCGCCAGAGAACCTGACC-GCGGCATTGGGGTTCCGACGATCG-GGGGGCCGGG-G
* * * *
48367 GGTGTGCGCACATGATATGTGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCA
192 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCA
** *
48432 TCAAACCTTAAGAACTCACACCCACTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
257 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
48497 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
322 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
48562 TTTTAGCTGAATTGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG
387 TTTTAGCTGAATT-TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG
* * * *
48627 CCAAAACTCCTTGCAAAAAAATTTAAAAAAATCGCGAATCGTAAAAAGTTTCAAAAATCATGAAA
451 CCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAA
* * * *
48692 AATAGAAAA-TAGATCATCTTGCCATTAAGCTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
516 AATAGAAAACGAG-TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAAT
** *
48756 TTACAAGTTATAAAAATGGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTATCAC
580 TTACAAGCCATAAAAATGGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTACCAC
*
48821 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCTCCTGCTCGTTTCG
645 CCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCTCGTTTCG
* * * * *
48886 TCGATTGGCTTAGGCATACGGAGTTCATTCCCAGCCTAAAATCAGACCAGACCGAGGGTTGCGAC
710 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGAC
* *
48951 AGCAGGATTGGCAACACGCAAATGGGGACCCGGCCGATCCTCGGCTTGCGCATCCCGCCCCTCTG
775 AGCAGGATCGGCAACACGCAAATGGGGACCCGACCGATCC-CGGCTTGCGCATCCCGCCCCTCTG
* * *
49016 GCCGGCTGAGTGCCTGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGA
839 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
** ** *
49066 AGTTTGTTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCATACCGGACCGAGGGTT
1 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * * * *
49131 GCGGCAGTACATGCTAGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTTGTCGGGGCACCATCG
66 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
* * *
49196 CCGGAGCATCGTCGGAGAACCTGACCAGCGGCATTGGGGTTCC-AGCGATCGGGGTGCCGGGGGG
131 CCGGAGCATCGCCAGAGAACCTGACC-GCGGCATTGGGGTTCCGA-CGATCGGGGGGCC--GGGG
** * *
49260 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTCACCCTTATATTGGTGCCCTATCCCTAA
192 GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCA
* ** *
49325 TCAAACCTCGAGAACTCACGCTTCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAG
257 TCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG
*
49390 CCATTAAGGTGTCTGAAAT-GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
322 CCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGT
* * * *
49454 TTTTAGCCGAATTTTTGTGTGCATGCCAACAAAAATACAAGGATCACGTCCACCAATTTTGGGGC
387 TTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC
* * ** *
49519 CAAAACTCCTACCGAAAATTTTTTAAAAAATCCTGAACCGTAAAAAGTTT-AGAAAATCATGAAA
452 CAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA-AAAATCATGAAA
*
49583 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAGGGCTTAAGGGACCATTGTATGAATT
516 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
* ** * *
49648 TACAAGCCATAAAAATGGCATTGGCAT-ACAGAAATATGAGGA--T-CC---A-CGGCTTGCACA
581 TACAAGCCATAAAAATGGCATTGGCATGA-AGAAATATGAAGATGTGCCTAAACCCACCTAC-CA
* * * ** * * *
49705 TCCTGTC--TCTC-TGGCAGGCGTAGTGCCCG---C-GT-GCC--C-----GCCCGCCTGCTTGT
644 CCCTATCGATC-CACGGCTTGCGCA-T-CCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCTCGT
* * ** *
49755 TTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCGGATTGGACCAAGGGTTG
706 TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTG
** * * * * * * *
49820 CGGTAGTAGGATCGGTACCACGCAGAGGGGGACCCGACCGATCCCCGTCTTACGCATCCCGCCCC
771 CGACAGCAGGATCGGCAACACGCAAATGGGGACCCGACCGAT-CCCGGCTTGCGCATCCCGCCCC
*
49885 TCTGGCCGGCTGAGCGCCCGCACGCTTGTTTC----G-TG-----GGC-T---G
835 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
* *
49925 A---C-TT---AG-----GCATACGGAGGTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTT
1 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * * ** * *
49978 GCGGCAGCACATGCTGGGCTCAGGCATGGGCTGGTG-TGCATTTTTCTTCACCGAGACACCATCG
66 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
* * * * * *
50042 TCAGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGGGGCCGGGGGG
131 CCGGAGCATCGCCAGAGAACCTGACCG-CGGCATTGGGGTTCCGACGATC-GGGGGGCCGGGGGG
* * * * *
50107 TTTGTGCACATGATGTGCGATGGGTGCTGGTAGTTGGCCCTTATATTGTTCCTCTATCCCTCATC
194 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATC
* * *
50172 AAACCTCGAAAACTCACACCCCCTTAAATAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCC
259 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
*
50237 ATTAAAGTGTCTGAAATGGGGACACTTTATTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
324 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* * * **
50302 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGGTCATGTCTTCCAAGTTTTTTAGG-
389 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG--TTTGGGGC
* * *
50366 CAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTAAAAATCATGAAAA
452 CAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAA
* **
50431 ATAGAAAACGAGTCGTCCTGCTGTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
517 ATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTT
*
50496 ACAAGCCATAAAAATGGCATTGGCA-CATAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
582 ACAAGCCATAAAAATGGCATTGGCATGA-AGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * * * *
50560 CTATCGATCCATGGCTTGCGCATGCCGTCTCTCTGACAGGCGTAGTGCCCGCCCGCCCGCTCGTT
646 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCGCCTGCTCGTT
* * * * * * *
50625 TCGTCGGTTGGCTTTGGCATACAGAGTTCATTCCCAATCTAAGATTGGACCGGACTGAAGGTTGT
707 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC
* * * * * *
50690 GGCAGCAGGATCAGTAGCACGC-AGTGGGGGA-CCGATCGATCCCTGGCTTGCGCATCCCGCCCC
772 GACAGCAGGATCGGCAACACGCAAAT-GGGGACCCGACCGATCCC-GGCTTGCGCATCCCGCCCC
* * * *
50753 TCTGGTCGGCTGAGCGCCCGCACGCTCGTTCCATGGGTTGACTTAGGCATACGG
835 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
* ** *
50807 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGACCGAGTGTT
1 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* *
50872 GCGGCAGCACATGCTGGGCTTGGGCATGTGCTGGTGCCGCGTTTTTCTTCGTCGGGGCACCATCG
66 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
* * * * *
50937 CCAGAGCATCGCCAGAGAACCTGACCAGCGGCATTAGGGTTCCAATGATCGGGGGGCCGGGAGGT
131 CCGGAGCATCGCCAGAGAACCTGACC-GCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGT
* *
51002 GTGCGCACATGATGTGTGATGGCTGCTGGTACTT-GCCC---------T---CTATCCCTCATCA
195 GTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCA
* **
51054 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCGGTAGTTA
260 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* *
51119 TTAAAGTGTCTGAAATGGGGACAGTTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTT
325 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* **
51184 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTCGGGGGGA
390 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGGCCA
* * * * * * **
51249 AAA-TCCTTCCAAAAATATTTTAAGAAATCACAAACCGCAAATAGTTTTGAAAATCGA-GAAAAA
454 AAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC-ATGAAAAA
* * *
51312 TAGAAAACGGGTCGTCTTGCCATGAAACTTCGCGTGAAGTCTTAAGGGACCATTGTATGAATTTA
518 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
51377 CAAGCCATAAAAATGGCATTGGCATGCAGAAATAAGAAGATGTGCCTAAACCCACCTACCACCCT
583 CAAGCCATAAAAATGGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * *
51442 ATCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGTGCCTGTCCGCCCGCTCATTTC
648 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG-C---CCGCCTGCTCGTTTC
* *
51507 GTCCGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGA
709 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGA
* * * * * * * *
51572 TAGCAGGATCGACAGCACGCAGAGGGGGACCCAACCAATCCCCGGCTTGCGCATCCCGCCACTCT
774 CAGCAGGATCGGCAACACGCAAATGGGGACCCGACCGAT-CCCGGCTTGCGCATCCCGCCCCTCT
*
51637 GGTCGGCTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
838 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
*
51688 AGTTCATTCCCAG-C----C-TA---A----A-----A---T----T-GGACCAGACCAAGGGTT
1 AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
* * *
51727 GCAGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCTCATTTTTCTTCGTCGGGGCCCCATCG
66 GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
* * *
51792 TCGGAGCATCGCCAGAGAACCTGACCGACGGCACTGGGGTTTCGACGATCGGGGGGCCGGGGGGG
131 CCGGAGCATCGCCAGAGAACCTGACCG-CGGCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGG
* **
51857 TGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTTGTC
194 TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATC
* *
51922 AAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCC
259 AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
* * *
51987 TTTAAAGTGTCTGAAATGGGGACACTTTTTTTAAATGGTCACAAAATCTTGTACACTTTGAGTTT
324 ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
* *
52052 TTAGCTGAATTTTTTTGTGTATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCCA
389 TTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCA
* * * * *
52117 AAACACCCTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAAT
454 AAACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAAT
52182 AGAAAAC
519 AGAAAAC
52189 AAAAACGGCT
Statistics
Matches: 3457, Mismatches: 416, Indels: 284
0.83 0.10 0.07
Matches are distributed among these distances:
845 139 0.04
846 158 0.05
847 241 0.07
848 6 0.00
849 1 0.00
850 2 0.00
852 2 0.00
853 11 0.00
854 7 0.00
855 134 0.04
856 41 0.01
857 5 0.00
858 1 0.00
859 1 0.00
860 2 0.00
862 1 0.00
863 4 0.00
866 1 0.00
867 109 0.03
868 64 0.02
869 332 0.10
870 1 0.00
872 2 0.00
873 150 0.04
874 81 0.02
875 5 0.00
876 2 0.00
877 4 0.00
878 46 0.01
879 14 0.00
880 381 0.11
881 408 0.12
882 260 0.08
883 9 0.00
884 6 0.00
885 14 0.00
886 2 0.00
887 1 0.00
888 2 0.00
889 3 0.00
890 2 0.00
891 196 0.06
892 66 0.02
893 353 0.10
894 124 0.04
895 62 0.02
896 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
AGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT
GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG
CCGGAGCATCGCCAGAGAACCTGACCGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTG
TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAA
ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
ACTCCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAG
AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
GCCATAAAAATGGCATTGGCATGAAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCTCGTTTCGTCGGTT
GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGACAGCAGG
ATCGGCAACACGCAAATGGGGACCCGACCGATCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCT
GAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGG
Found at i:50828 original size:26 final size:26
Alignment explanation
Indices: 50799--50851 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
50789 GTTGACTTAG
50799 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
50825 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
50851 G
1 G
50852 ATTGGACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:51548 original size:880 final size:874
Alignment explanation
Indices: 49688--52188 Score: 3003
Period size: 869 Copynumber: 2.9 Consensus size: 874
49678 GAAATATGAG
* *
49688 GATCCACGGCTTGCACAT-CCTGTCTCTCTGGCAGGCGTAGTGCCCGCGTGCCCGCCCGCCTGCT
1 GATCCACGGCTTGCGCATGCC-GTCTCTCTGACAGGCGTAGTG-CC-C--GCCCGCCCG-CT-C-
* * * ** * ** *
49752 TGTTTCATCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATCGGATTGGAC-CAAGG
58 -ATTTCGTCCGTTGGCTTAGGCATACAGAGTTCATTCCCAATCTAAGATCGGACCGGACTGAA-G
** * ** * * * * *
49816 GTTGCGGTAGTAGGATCGGTACCACGCAGAGGGGGACCCGACCGATCCCCGTCTTACGCATCCCG
121 GTTGCGACAGCAGGATCGACAGCACGCAGAGGGGGACCCAACCAATCCCCGGCTTGCGCATCCCG
* * * * * *
49881 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTTGTTTCGTGGGCTGACTTAGGCATAC---G-----
186 CCACTCTGGTCGGCTGAGCGCCCGCACGCTCGTTCCATGGGTTGACTTAGGCATACGGAGTTCAT
*
49938 -----G---A--G-GTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGC
251 TCCCAGCATACGGAGTCATTCCCAGTCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATGC
* * * ** * * * *
49992 TGGGCTCAGGCATGGGCTGGTG-TGCATTTTTCTTCACCGAGACACCATCGTCAGAGCATCGTCG
316 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGCCA
* * *
50056 GAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCGGGGGGGCCGGGGGGTTTGTGCACATGAT
381 GAGAACCTGACCGACGGCATTGGGGTTTCGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGAT
* * *
50121 GTGCGATGGGTGCTGGTAGTTGGCCCTTATATTGTTCCTCTATCCCTCATCAAACCTCGAAAACT
445 GTGTGATGGGTGCTGGTA-------C-----TTG-CCCTCTATCCCTCATCAAACCTCGAGAACT
* * *
50186 CACACCCCCTTAAATAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
497 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGA
*
50251 AATGGGGACACTTTATTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
562 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * ***
50316 TTGTGCATGCCAACAAAAATACAAGGGTCATGTCTTCCAAGTTTTTTAGGCAAAACTCCTTCCGA
627 TTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAG-TTTGGGGGCAAAACTCCTTCCGA
* *
50381 AAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTTAAAAATC-ATGAAAAATAGAAAACGAGTC
691 AAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTTAAAAATCGA-GAAAAATAGAAAACGAGTC
**
50445 GTCCTGCTGTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
755 GTCCTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
* *
50510 TGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
820 TGGCATTGGCACACAGAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATC
* *
50565 GATCCATGGCTTGCGCATGCCGTCTCTCTGACAGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTC
1 GATCCACGGCTTGCGCATGCCGTCTCTCTGACAGGCGTAGTGCCCGCCCGCCCGCTCATTTCGTC
* * * * *
50630 GGTTGGCTTTGGCATACAGAGTTCATTCCCAATCTAAGATTGGACCGGACTGAAGGTTGTGGCAG
66 CGTTGGCTTAGGCATACAGAGTTCATTCCCAATCTAAGATCGGACCGGACTGAAGGTTGCGACAG
* * * * * * *
50695 CAGGATC-AGTAGCACGCAGTGGGGGA-CCGATCGATCCCTGGCTTGCGCATCCCGCCCCTCTGG
131 CAGGATCGA-CAGCACGCAGAGGGGGACCCAACCAATCCCCGGCTTGCGCATCCCGCCACTCTGG
50758 TCGGCTGAGCGCCCGCACGCTCGTTCCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
195 TCGGCTGAGCGCCCGCACGCTCGTTCCATGGGTTGACTTAGGCATACGGAGTTCATT-CC---C-
* *
50823 AAGCATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGACCGAGTGTTGCGGCAGCACATGCTG
255 -AGCATACGGAG-TCATTCCCAGTCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATGCTG
* * *
50888 GGCTTGGGCATGTGCTGGTGCCGCGTTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGCCAGA
318 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGCCAGA
* * * * *
50953 GAACCTGACC-AGCGGCATTAGGGTTCCAATGATCGGGGGGCCGGGAGGTGTGCGCACATGATGT
383 GAACCTGACCGA-CGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGT
*
51017 GTGATGGCTGCTGGTACTTGCCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
447 GTGATGGGTGCTGGTACTTGCCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * *
51082 AGCATTTGAGATTTTACAGGTTTGCTGCCGGTAGTTATTAAAGTGTCTGAAATGGGGACAGTTTT
512 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTT
*
51147 TTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
577 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* *
51212 AAAATACAAGGATCATGTCTACCAAGTTTCGGGGGGAAAA-TCCTTCC-AAAAATATTTTAAGAA
642 AAAATACAAGGATCATGTCTACCAAGTTT-GGGGGCAAAACTCCTTCCGAAAAA-ATTTTAAAAA
* * * * * *
51275 ATCACAAACCGCAAATAGTTTTGAAAATCGAGAAAAATAGAAAACGGGTCGTCTTGCCATGAAAC
705 ATCCCAAACCGTAAAAAGTTTTAAAAATCGAGAAAAATAGAAAACGAGTCGTCCTGCCATGAAAC
* * **
51340 TTCGCGTGAAGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
770 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACA
51405 GAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATC
835 GAAATAAGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * *
51445 GATCCACGGCTTGCGCAT-CTCGTCTCTCTGGCCGGCGTAGTGCCTGTCCGCCCGCTCATTTCGT
1 GATCCACGGCTTGCGCATGC-CGTCTCTCTGACAGGCGTAGTGCCCGCCCGCCCGCTCATTTCGT
* * * *
51509 CCGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGATA
65 CCGTTGGCTTAGGCATACAGAGTTCATTCCCAATCTAAGATCGGACCGGACTGAAGGTTGCGACA
51574 GCAGGATCGACAGCACGCAGAGGGGGACCCAACCAATCCCCGGCTTGCGCATCCCGCCACTCTGG
130 GCAGGATCGACAGCACGCAGAGGGGGACCCAACCAATCCCCGGCTTGCGCATCCCGCCACTCTGG
* * *
51639 TCGGCTGAGCGCCCGCACGCTCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAG---
195 TCGGCTGAGCGCCCGCACGCTCGTTCCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGCAT
* * *
51701 -C-----C--T---A----AA-ATTGGACCAGACCAAGGGTTGCAGCAGCACATGCTGGGCTCGG
260 ACGGAGTCATTCCCAGTCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGG
* * *
51750 GCATGTGCTGGTGCCTCATTTTTCTTCGTCGGGGCCCCATCGTCGGAGCATCGCCAGAGAACCTG
325 GCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGCCAGAGAACCTG
*
51815 ACCGACGGCACTGGGGTTTCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGG
390 ACCGACGGCATTGGGGTTTCGACGATCGGGGGGCC-GGGGGGTGTGCGCACATGATGTGTGATGG
** *
51880 GTGCTGGTACTTGGCCCTTATATTGGTCCCCTATCCCTTGTCAAACCTTGAGAACTCACACCCCC
454 GTGCTGGTACTT-GCCC---------T---CTATCCCTCATCAAACCTCGAGAACTCACACCCCC
*
51945 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCT-TTAAAGTGTCTGAAATGGGGA
506 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAG-CTATTAAAGTGTCTGAAATGGGGA
* * *
52009 CACTTTTTTTAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGTAT
570 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAT
* ** * *
52074 GCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCCAAAACACCCTCCGAAAAAATTTT
635 GCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGGCAAAACTCCTTCCGAAAAAATTTT
* *
52139 AAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAAC
700 AAAAAATCCCAAACCGTAAAAAGTTTTAAAAATCGAGAAAAATAGAAAAC
52189 AAAAACGGCT
Statistics
Matches: 1417, Mismatches: 152, Indels: 118
0.84 0.09 0.07
Matches are distributed among these distances:
855 125 0.09
856 42 0.03
857 4 0.00
860 1 0.00
863 1 0.00
865 1 0.00
866 1 0.00
868 82 0.06
869 319 0.23
870 8 0.01
871 3 0.00
872 2 0.00
873 9 0.01
875 3 0.00
876 2 0.00
877 37 0.03
878 2 0.00
879 6 0.00
880 308 0.22
881 283 0.20
882 3 0.00
887 2 0.00
890 1 0.00
892 1 0.00
893 1 0.00
894 108 0.08
895 62 0.04
ACGTcount: A:0.24, C:0.25, G:0.25, T:0.26
Consensus pattern (874 bp):
GATCCACGGCTTGCGCATGCCGTCTCTCTGACAGGCGTAGTGCCCGCCCGCCCGCTCATTTCGTC
CGTTGGCTTAGGCATACAGAGTTCATTCCCAATCTAAGATCGGACCGGACTGAAGGTTGCGACAG
CAGGATCGACAGCACGCAGAGGGGGACCCAACCAATCCCCGGCTTGCGCATCCCGCCACTCTGGT
CGGCTGAGCGCCCGCACGCTCGTTCCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGCATA
CGGAGTCATTCCCAGTCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGG
CATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCAGAGCATCGCCAGAGAACCTGA
CCGACGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGTGATGGGT
GCTGGTACTTGCCCTCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGA
GATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGG
TCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAA
GGATCATGTCTACCAAGTTTGGGGGCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCG
TAAAAAGTTTTAAAAATCGAGAAAAATAGAAAACGAGTCGTCCTGCCATGAAACTTCACGTGAAG
GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATAAGAAG
ATGTGCCTAAACCCACCTACCACCCTATC
Found at i:53926 original size:26 final size:26
Alignment explanation
Indices: 53889--53941 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
53879 GTTGACTTAG
*
53889 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
53915 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
53941 G
1 G
53942 ATCGAACAGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:54793 original size:894 final size:891
Alignment explanation
Indices: 52973--55468 Score: 4106
Period size: 894 Copynumber: 2.8 Consensus size: 891
52963 GCACCCGCAC
* * * ** * *
52973 GCTCGTTTCATGGGTTGACTTAGGGATACAGAGTTCATTCCCAGAATAAGCATATGGAGTTCGTT
1 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* * **
53038 CCCAGTCTAAGACCGGACCGGATCGAGGGTTGTGACAGCACATGCTGGGA-TCGGGCATGTGCTG
66 CCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCACATGCT-GGACTCGGGCATGTGCTG
** * *
53102 GTGATGCATTTTTCTTCGTCGGGGTACCATCATCGGAGCATCGCCGGAGAACCTGACCGACGGCA
130 GTGCCGCATTTTTCTTCGTCGGGGCACCATCAT-GGAGCATCGCCGGAGAACCTGACCGGCGGCA
*
53167 TTGGGGTTCCGACAATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
194 TTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
*
53232 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCATACCCCCTTAAAGAGCA
259 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TGAGAACTCACACCCCCTTAAAGAGCA
* * * *
53297 TTTGAAATTTTACAGGTTTACTGTCAGTAGCCGTTAAAGTGTCTGAAATGGGGACACTCTTTTCA
323 TTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
53362 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGTGCATGACAACAAAAA
388 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGTGCATGACAACAAAAA
53427 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCTGAAAAAATTTAAAAAAATCCCA
453 TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCTGAAAAAATTTAAAAAAATCCCA
53492 AACCGTAAAAATTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGT
518 AACCGTAAAAATTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGT
53557 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACGTAGAAATAT
583 GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACGTAGAAATAT
53622 GAAGATGTGCCTAAATGCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGGC
648 GAAGATGTGCCTAAATGCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGGC
53687 CAACGTAGTGCCCGTCCGCCCACCCGCCTGCTCGTTTCGTCGGTTGGCTTAAGCATACAAAGTTC
713 CAACGTAGTGCCCGTCCGCCCACCCGCCTGCTCGTTTCGTCGGTTGGCTTAAGCATACAAAGTTC
53752 ATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTACGGTAGTAGGATCGGCAGCACGCAGAGGGG
778 ATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTACGGTAGTAGGATCGGCAGCACGCAGAGGGG
53817 GACCCGACCAATCCCTGGCTTATGCATCCCGCCCCTCTGGCCGGTTCAT
843 GACCCGACCAATCCCTGGCTTATGCATCCCGCCCCTCTGGCCGGTTCAT
*
53866 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATT
1 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* *
53931 CCCAGTCTAAGATCGAACAGACGACCGA-GGTTGTGGTAGCACATGCTGGACTCGGGCATGTGCT
66 CCCAGTCTAAGATCGGACCG--GACCGAGGGTTGTGGTAGCACATGCTGGACTCGGGCATGTGCT
* * * * *
53995 GGTGCCGCATTTTTCTTCGTCGGGGCAACATCGGTGGAGCATCGTCGGAGAACCCGACCGGCGTC
129 GGTGCCGCATTTTTCTTCGTCGGGGCACCATC-ATGGAGCATCGCCGGAGAACCTGACCGGCGGC
*
54060 ATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
193 ATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
*
54125 CGTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCATGAGAACTCACACCCCCTTAAAGAGC
258 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-TGAGAACTCACACCCCCTTAAAGAGC
* * * *
54190 ATTTGAGATTTTGCAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTTAAATGGGGACACTTTTTTC
322 ATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
54255 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGTGCATGACAACAAAA
387 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGTGCATGACAACAAAA
54320 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCTGAAAAAATTTAAAAAAATCCC
452 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCTGAAAAAATTTAAAAAAATCCC
54385 AAACCGTAAAAATTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACG
517 AAACCGTAAAAATTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACG
54450 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACGTAGAAATA
582 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACGTAGAAATA
54515 TGAAGATGTGCCTAAATGCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGG
647 TGAAGATGTGCCTAAATGCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGG
*
54580 CCAACGTAGTGCCCGTCCGCCCACCCGCCTGCTCGTTTCGTCGGTTGGCTTAAGCATACAGAGTT
712 CCAACGTAGTGCCCGTCCGCCCACCCGCCTGCTCGTTTCGTCGGTTGGCTTAAGCATACAAAGTT
*
54645 CATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTACGGTAGTAGGATCGGTAGCACGCAGAGGG
777 CATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTACGGTAGTAGGATCGGCAGCACGCAGAGGG
*
54710 GGACCCGGCCAATCCCTGGCTTATGCATCCCGCCCCTCTGGCCGGTTCAT
842 GGACCCGACCAATCCCTGGCTTATGCATCCCGCCCCTCTGGCCGGTTCAT
54760 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
1 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* * * *
54825 CCCAGTCTAAGATTGGACCGGACCAAGGGTTGTGGTACCACATGCTGGGCTCGGGCATGTGCTGG
66 CCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCACATGCTGGACTCGGGCATGTGCTGG
* ** * *
54890 TGCCGTATTTTTCTTCACCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACCGGAGGCAT
131 TGCCGCATTTTTCTTCGTCGGGGCACCATCA-TGGAGCATCGCCGGAGAACCTGACCGGCGGCAT
* * *
54955 T-GGGTTCTGACGATCAGGGGGGGCGGGGGGGTGTGCGTACATGATGTGCGATGGGTGCTGGTAC
195 TGGGGTTCCGACGATC-GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
*
55019 TTGGCCCTTATATTGGCCCCCTATTCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
259 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT-GAGAACTCACACCCCCTTAAAGAGCA
*
55084 TTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCA
323 TTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* * * * *
55149 AATGGCCACAAAATCTTGTACACTTTGAGTTTTTAACT-AACTTTTTTTGTGCATGCCAAAAAAA
388 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAA-TTTTTTTGTGCATGACAACAAAA
* ** * ** *
55213 ATACAAGGATCACGTCTACCAAGTGTGAAGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAT-CC
452 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCTGAAAAAATTTAAAAAAATCCC
* * * * **
55277 AGAACTGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCA
517 A-AACCGTAAAAA-TTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCA
* * * *
55342 CGTGAA-GCTTAAGGGACCATTGTATGAAGTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
580 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACGTAGAAA
* * * * *
55406 TATGAAGATGTGCCTAAA-CCAACCTACCACCCTATCGATCCATGGCTTGCACATCCCATCTCT
645 TATGAAGATGTGCCTAAATGC-ACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCT
55469 TTGGTATACG
Statistics
Matches: 1497, Mismatches: 94, Indels: 24
0.93 0.06 0.01
Matches are distributed among these distances:
892 24 0.02
893 565 0.38
894 902 0.60
895 6 0.00
ACGTcount: A:0.27, C:0.24, G:0.24, T:0.26
Consensus pattern (891 bp):
GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
CCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCACATGCTGGACTCGGGCATGTGCTGG
TGCCGCATTTTTCTTCGTCGGGGCACCATCATGGAGCATCGCCGGAGAACCTGACCGGCGGCATT
GGGGTTCCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTT
GGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTGAGAACTCACACCCCCTTAAAGAGCATTT
GAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
GGTCACAAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGTGCATGACAACAAAAATAC
AAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCGTTCTGAAAAAATTTAAAAAAATCCCAAAC
CGTAAAAATTTTAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAA
GGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACGTAGAAATATGAA
GATGTGCCTAAATGCACCTACCACCCTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGGCCAA
CGTAGTGCCCGTCCGCCCACCCGCCTGCTCGTTTCGTCGGTTGGCTTAAGCATACAAAGTTCATT
CCCAGTCTAAGATTGGACCAGACCGAGGGTTACGGTAGTAGGATCGGCAGCACGCAGAGGGGGAC
CCGACCAATCCCTGGCTTATGCATCCCGCCCCTCTGGCCGGTTCAT
Found at i:54819 original size:26 final size:26
Alignment explanation
Indices: 54783--54835 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
54773 GTTGACTTAG
54783 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
54809 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
54835 G
1 G
54836 ATTGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:55510 original size:26 final size:26
Alignment explanation
Indices: 55474--55524 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
55464 TCTCTTTGGT
55474 ATACGAAGTTCATTCCAAGTCTAAGC
1 ATACGAAGTTCATTCCAAGTCTAAGC
* *
55500 ATACGGAGTTCATTCCCAGTCTAAG
1 ATACGAAGTTCATTCCAAGTCTAAG
55525 ATCGGACTGG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.24, G:0.18, T:0.27
Consensus pattern (26 bp):
ATACGAAGTTCATTCCAAGTCTAAGC
Found at i:56340 original size:26 final size:26
Alignment explanation
Indices: 56290--56342 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
56280 GTTGACTTAG
*
56290 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
56316 GCATACGGAGTTCATTCCCGGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
56342 G
1 G
56343 ATCGGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:58115 original size:26 final size:26
Alignment explanation
Indices: 58074--58126 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
58064 GTTGACATAG
* *
58074 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTACATTCCCAGTCTAA
*
58100 GCATACGAAGTACATTCCTAGTCTAA
1 GCATACGAAGTACATTCCCAGTCTAA
58126 G
1 G
58127 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.25, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTACATTCCCAGTCTAA
Found at i:59014 original size:26 final size:26
Alignment explanation
Indices: 58978--59027 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
58968 GTTGACTTAG
*
58978 GCATACGGAGTTCATTCCCAGTCTCA
1 GCATACAGAGTTCATTCCCAGTCTCA
59004 GCATACAGAGTTCATTCCCAGTCT
1 GCATACAGAGTTCATTCCCAGTCT
59028 AAGATCGGAT
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.30, G:0.18, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTCA
Found at i:59920 original size:26 final size:26
Alignment explanation
Indices: 59884--59936 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
59874 GTTGACCTAG
*
59884 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
59910 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
59936 G
1 G
59937 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:60140 original size:903 final size:904
Alignment explanation
Indices: 55605--68018 Score: 13949
Period size: 903 Copynumber: 14.0 Consensus size: 904
55595 GCCCCTTAAA
*
55605 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCGAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * * * *
55670 ACTCACACCTCCTTAAAGAGCATGTCAGATTTTACAGGTTTGCTGCCAGTAGCTACTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
*
55735 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAAT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * *
55800 TTTTTGTGGATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACACCTTCC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * * ** * *
55865 AAAAAAATTTTAACAAAT-CTCGAACCGCT-AAAAGTTTTGAAAATCGTGAAAAAGAGAAAACGA
261 GAAAAAATTTTAAAAAATCCT-AAACCG-TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
* * * *
55928 GTCATCTTACCATTAAAAGTTCACGTGAAGGCTTAAGGG-CCATTGTATGAATTTACAAGCCATA
324 GTCGTCTTGCCA-TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* *
55992 AAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
388 AAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * *
56057 TGGCTTACGCATGCCGTCTCTTTGGCCGACGTAGT---C-CCCG--CTCGCCCGCCTGCTC-TTT
453 CGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTT
* * * * *
56115 CCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGGCTAAGATCGGACC-GGATCGAGGGTTG
518 -CGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAAT-GAGGGTTA
** ** * * * * * **
56179 CAACAGCAGGATCGGTAGCACCCAGAGGTGGACCCGGCTGATCCCCGACTTATGCATCCCGCCCC
581 CGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
* * *
56244 TCTGGCCGGCTGACCGCCCACACGTTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
646 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* * ** * *
56309 ATTCTAAGCATACGGAGTTCATTCCCGGTCTAAGATCGGATTGGGCCGAGGGTTGCTGCAGCACA
711 AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACA
* * * * * * *
56374 TGCTGGGCTCAGGCATGTG-TGGTGCTGCATTTTTC-TCTGTCGAGGCATCATCGTCAGAGCATC
776 TGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-GCCG-GGGACCATCGCCGGAGCATC
** * * * * * * * *
56437 GTCGGAGAACCTGACCGGTGCCATTAGGGTTCCGGCGAACGGGGGGCCGAGGGGGTGTGCGCACA
839 ACCGAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCAGGGGGGGTGTGCGCACA
56502 T
904 T
* * *
56503 GATGTGCGACGGGTGCTGGTTCTTGGCCCTGATATTGGCCCCCTATCCCTCATCAAACCTCGCAG
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG-AG
* * *
56568 -AGTCACACACCCTTAAAGAGCAATTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
65 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* * * * *
56632 CTGAAATGGGGACACATTTTTCAAATGGTCACAAAATCTTATACACTTAGGGTTTTTAGCCG-AT
130 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * * *
56696 TTTTTTGTGCATGCCAAGAAATATGCAAGGATCACGTCTACCAAGTTTGGGCCCAAAACT-CTTC
195 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * * * * *
56760 TCAAAAAAATTTTAAAAAAT-CTCGAACTGCAAAAAGTTTCAAAAATCCTAAAAAATAAAAAACG
260 -CGAAAAAATTTTAAAAAATCCT-AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACG
*
56824 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCCTAAGGGACCATTGTATGAATTTACAAGCCATA
323 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
* *
56889 AAAATGGAATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC-ATTCC
388 AAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA-TCC
* * *
56953 ACGGGCTAT--GCAT-CCGT-TCTCT-GCCGCCGTAATGCCCGCCCCGTCGCGGCCCGCCCG-CC
452 AC-GGCT-TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CCCG-C-C--CTCGCCCGCCC
* * * * * **
57012 GCTTGTTCCATCGGTTGGC-T--G-AAATGGAGCTT-ATT-CCAGTCTAAGATCAGACCAG-CCG
510 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG-TTCATTCCCAGTCTAAGATCAGACCAGAATG
* * * * *
57070 A-GGTTAC-GTAGCAGGATCGACAGCATGCAGA-TGAGA-CCGATCGATCCCCTGGC-TGCGCAT
574 AGGGTTACGGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCC-GGCTTGCGCA-
* * * *
57130 TCCCACCCCTTTGGCTGGGCTGAAGCGCCCGCACAC-CGTTTC-TGCGGTTGACTTAGGCATACG
637 TCCCGCCCCTCTGGC-CGGCTG-AGCGCCCGCACGCTCGTTTCGTG-GGTTGACTTAGGCATACG
* ** * * * **
57193 AAGTTCA-TCATAGTCTAAAGCATAC-GA-TTCATTCCCA-TCTATGAATCAGGATCGAAATGA-
699 GAGTTCATTCCCAGTCT-AAGCATACGGAGTTCATTCCCAGTCTAAG-ATC-GGACCGGACCGAG
* * * * * * * * *
57253 AGTTGCGGTAG-ACATG-TGGGCTCGAGCAGGGTGCT-GTG-CACATTTTTCTCCGTCGGGCACC
761 GGTTGCAGCAGCACATGCTGGGCTCGGGCA-TGTGCTGGTGCCGCATTTTTCTTCGCCGGGGACC
* ** * * * *
57314 ATCGCCGGAG-ATCGTCAAAGAGAACCTGACCAGTGGCATT-GGGTT-CG-CGATC-GAGGCCAG
825 ATCGCCGGAGCATC-ACCGA-AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCAG
** *
57374 GGGGGGTGTGAACGCA-
888 GGGGGGTGTGCGCACAT
* *
57390 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAACTCAAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * *
57455 ACTCACACCCCCTTAAAGGGTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTT
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * * * *
57520 TGAAATGGCGACACTTTTTTCAAATGGTCACAAACTCATGTACACTTTGAGTTTTTAGTTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * *
57585 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTTTACCAAGTTTGGGCCCAAAACT-CTTTC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * *
57649 GAAAAAATTTTAAAAAAT-CTCGAACCGCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAG
261 GAAAAAATTTTAAAAAATCCT-AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
57713 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAA
325 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
57778 AATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCGACCTACCACCTTATCGATCCACG
390 AATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * *
57843 ACTTGCGCATCCCGTCTCTCTGGTCGACGTTGTGCCCGCCCGCCCAT-------CCGCTCGTTTC
455 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCC-TCGCCCGCCCGCTCGTTTC
* * **
57901 GTCAGTTGGCTTAGGCATACGGAGTTAATTCCCAGTCTAAGATC-GTACCA-AACCAAGGGTTAC
519 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGAA-TGAGGGTTAC
* * ** *
57964 GGCAGCAGGATCAACAGCACGTAGAGGGGGACCCGGTCGATCCCCAGCTTGCGCATCCCGCCCCT
582 GGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * * * * * * * *
58029 TTGGGCGGTTGTGTGCCCGCACACTCATTTTGTGGGTTGACATAGGCATACGGAGTTCATTCCCA
647 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * * * * *
58094 GTCTAAGCATACGAAGTACATTCCTAGTCTAAGATCGGACCAGACCGAGGGTTGCGGTAGCACAT
712 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACAT
* * * **
58159 GCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCTGGAGCATCGT
777 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCAC
* * * *
58224 C-AGAGAACCTGACCGACGGCATCGGGGTTCCTG-CGATCGGACGGGTC-GGGGGGATGTGCGCA
841 CGA-AGAACCTGACCGGCGGCATTGGGGTTCC-GACGATCGG--GGGGCAGGGGGGGTGTGCGCA
58286 CAT
902 CAT
*
58289 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* *
58354 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACATGTTTGCTGCCAGTAGCCACTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * *
58419 TGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTATACATCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * **
58484 TTTTTGTGCAAGCCAACTAAAATACAAGGATCATGTCTACCAAG-TTGGTTCCTAAAACTCCTTC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAAACTCCTTC
* * * * ** * *
58548 CAAAAAAATTTAAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTAAAAAATAGAAAACGAG
260 CGAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
*
58613 TCGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
325 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
58678 AATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATCCACG
390 AATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * *
58743 GCTTGCGCATCCCATCTCTCTGGCTGGCGTAGTGCTCGCCCG-CC-CGCCCGCCTGCTCGTTTCG
455 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTCG
** * * *
58806 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGA-CTGGATCGAGGGTGACGG
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAAT-GAGGGTTACGG
* * * * * * **
58870 TAGCAGGATCAACAGCGCACAGAGGGGGACCCGACCGATCCCCGGGTTACGCATCCCATCCCTCT
584 CAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * *
58935 GGCCGACTGAGCGCCCGCGCGCTCGTTTCGCGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
649 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * *
59000 CTCAGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCACCAGTACATGC
714 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGC
* * * **
59065 TAGGTTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCACC-
779 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCACCG
* **
59129 AGAGAACCTGACCGACGGCATT-GGGTTCTTACGATCGGAGGGGCCAGGGGGGGTGTGCGCACAT
843 A-AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGG-CAGGGGGGGTGTGCGCACAT
* **
59193 GATGTGCGATGGGTGCTGGTACTTCGCCCTTATA-TCACCCCCTATCCCTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* *
59257 ACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* *
59322 TAAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * *
59387 TTTTTATGCTTGCCAACAAAAATACAAGGATCACGTCTACCAGGTTTGGGGCCAAAACTCCTTTC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * ** * *
59452 GAAAAACTTTTAAAAAATCCTAAATCGTAAAAAGTTTTGAAAATTATGAAAAATAGAAAACAAGT
261 GAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
*
59517 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCAT-AAA
326 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
*
59581 ATGGCATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
391 ATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * *
59646 CTTGCGCATCCAGTTTTTCTGGCCGGTGCAGTGCCCGCCCGCCCGTCCGCCCGCCCGCTCGTTTC
456 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCC-T-CGCCCGCCCGCTCGTTTC
* *
59711 GTTGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGAGGGTTGCGG
519 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGAGGGTTACGG
* * * *
59776 TAGTAGGATCGACAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCTCATCCCGCCCCTCT
584 CAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * * * *
59841 GGCCGACTGTGTGCCCGCACGCTCGTTTCGTGGGTTGACCTAGGCATACGGAGTTCATTCCTAGT
649 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * ** *
59906 CTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT-CTAGCCTCATATG
714 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGC-AGCAGCACATG
* * * ** *
59970 CTGGGCTCAGGCATTTGCTGGTGCCACATTTTTCTTTACCGGGGACCATCACCGGAGCATCACCG
778 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGACCATCGCCGGAGCATCACCG
* * * * **
60035 AAGAACCTGACGGGTGACATTAGGGTTCCGACGATC-GGGGG-TTGGGGGGTGTGCGCACAT
843 AAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCAGGGGGGGTGTGCGCACAT
* * *
60095 GATGTGCGATGGGTGCTGGTACTTGGCCCCTATATTGGGCCCCTATCCCTCATCAAACCTCAAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* *
60160 ACTCACTCCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
*
60225 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATTTTGTACACTTCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * * * * * *
60290 ATTTTGTGCAAGCCAACTAAAATACAGGGATCATGTCTACCAAGTTCGGGGCTAAAACTCCTCCC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * ** *
60355 AAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGT
261 GAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
*
60420 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCTTAAAA
326 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* *
60485 ATGGCATTGGCACACATAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
391 ATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
*
60550 CTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-----G-CCGCCCGCTCGTTTCGT
456 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTCGT
* * * * **
60609 CAGTTGGCTTAGGCGTACAGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGATGGTTACACCA
521 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGAGGGTTACGGCA
* * * * *
60674 GTAGGATC-AGCAGCATGCAGAGGGGGACCCGACCGATCCCCAGCTAT-CGCATCCCGCCCATTT
586 GCAGGATCGA-CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCT-TGCGCATCCCGCCCCTCT
*
60737 GGCCAGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTG----A--CATA--G-G--------CA--
649 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * *
60783 -T--G----CGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTAC-GATAGCACATG
714 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAG-CAGCACATG
* * * * *
60840 CTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTTGTCGGGGCACCATCGTCGGAGCATCGCC
778 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCACC
* * * * *
60905 AAAGAACCTGACTGACGGCATTGGGGTTTCGACGATCGGGGGGGCCGAGGGGGGTGTGCGCACAT
842 GAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCAG-GGGGGGTGTGCGCACAT
* *
60970 GATGTGCGATGGGTGCAGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCTAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * **
61035 ACTCACACCTCCTTAAATAGCATTTGAGATTTTACAGGTTAACTGCCAGTAGCCATTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* *
61100 TGAAATGGGTACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* *
61165 TTTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGACAAAACTCCTTCC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
** * *
61230 GAAAAAATTTT----AATCCCGAACCGCAAAGAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
261 GAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
* *
61291 CGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATAAATTTACAAGCCATAAAA
326 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * * * * *
61356 ATGGCATTGGCATGTAGAAATATGAAGATGTACCTAAACCAACCTACCACACTATCGATCCATGG
391 ATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * * * * * *
61421 CTTCCACATCCCGTTTCTCTAGTCGGCGTAGTGCCCGGCCGCCC-AG-CCGCCTGCTCGTTTCAT
456 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTCGT
* * * * *
61484 CGGTTGGCTTAGGCATGCGAAGTTCATTCCTAGTCTAAGATC-GAACCAGATTGAGGGTTCCGGC
521 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGAATGAGGGTTACGGC
* * * * *
61548 AACAGGATCGCCAGCACGCAGAGGGGGACCCGGCCGATCCCCTGCTTGCGCATCCCGTCCCTCTG
585 AGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTG
61613 G-C--C--A------GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
650 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
61667 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGATCGAGGGTTGCGGCAGCACATGCT
715 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCT
* * * * * *
61732 AGGCTCGGGCATGTTCTGGTGCCGTATTTTTCTTTGCTGGGGCACCAT---C---G--T-A--GG
780 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCACCGA
* * ** * * * *
61786 AGAACTTGATCGGTAGCATTGGGGTTCCGATGATCGGGGGGCTGGGGGGGCTATACGCACAT
844 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCAGGGGGGG-TGTGCGCACAT
* * * *
61848 -AT-TGTG-T-GATG--GGTAC-TGG----TA-CTTGG--------CCCTCATCAAACCTCAAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
*
61893 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTCCCAGTAGCCATTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * *
61958 TGAAATGGGGACATTTTTTTCAAATGGTTAAAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
** *
62023 TTTTTGTAAATGCCAACAAAACA-ACAAGGATCACGTCTACCAAGTTTGGGGCTAAAACTCCTTC
196 TTTTTGTGCATGCCAACAAAA-ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * *
62087 CGAAAAAAGTTTAAAAAAT-TTGGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
260 CGAAAAAATTTTAAAAAATCCT-AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
* * *
62151 GTCATCTTGCCATGAAACTTCACGTGAAGGCATAAGGGACCATTGTTTGAATTTACAAGCCATAA
324 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* *
62216 AAAT-GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACGACCCTATCGATCCAT
389 AAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * **
62280 GGCTTGTGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGCCCG-CCT-----GCCAACTCGTTTC
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTC
* * * *
62339 GTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAATG-TCAGACCAGACTGAGGGTTGCA
519 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA-GATCAGACCAGAATGAGGGTTACG
* * * * *
62403 GCAGCAGGATC-AGCAGCACGCAGAGGGGGACTCG-GCAATCCCTGGCTTGCGCATCCCACCCCT
583 GCAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* *
62466 CTGGCTGGTTGAGCGCCCGCACGCTCGTTTCGT--G--G-C-T-----T---GA---C-TT---A
647 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* ***
62510 G-----GCATACGGAGTTCATTCCCAGTCTAAGATTGGACCGGACCGAGGGTTTTGGCAGCACAT
712 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACAT
* * * *
62570 GCTGGGCTCGGGCATTTGCTGGTGCCGCATTTTTCTTCACCCGGGCACCATCGTCGGAG-A--A-
777 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-GCCGGGGACCATCGCCGGAGCATCAC
** * * *
62631 C-TTG-A-CTGA----CGACATTGGGGTTCCGACGATCGGGGGGCCA-GGGGGCTGTGCACACAT
841 CGAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG-CAGGGGGGGTGTGCGCACAT
* * * *
62688 AACGTGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCTCTATCCCTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* *
62753 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTGCAGGTTTGCTGCCAGTAGCCCTTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * * * * *
62818 TAAAATAGGGACATTTTTTTCAAATGGTTACAAAATCTTTTACACTTCAAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * *
62883 TTTTTGCGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACTCCTTCC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * * * * *
62948 GAAAAAATTTTACAAAATCCTGAATCGTAAAAAGTTTTAAAAATCGTGAAAAATAAAAAACGAGT
261 GAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
*
63013 CGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
326 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * * *
63078 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAACCACCTACCACCCTATCGATCCATGA
391 ATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * * *
63143 CTTGCG-ATCCCGTATCTCTGGCTGACGTAGTGCCAGCCCGCCCAC-CCAC-CCCGCTCGTTTCA
456 CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCC-CGCCCGCTCGTTTCG
* * * * *
63205 TCGGTTGGCGTAGGCATACGGAGTTCTTTCCCAGTCTAAGATCGGACC-GAACCGAGGGTTACGA
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAA-TGAGGGTTACGG
* ** * * * * * *
63269 TAGCAGGATCGGTAGCACGTAGAGGGGGACCC-AGTCGATCCTCGACTTTCGCATCCCGCCCATC
584 CAGCAGGATCGACAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * *
63333 TGGCCGGCTGAGCACCCGCACGCTCATTTCGTGGGTTGACTTAGGCAAACGGAGTTCATTCCCAG
648 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
*
63398 TCTAAGCATACGGAGTTCATTCCCTGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGACC
713 TCTAAGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A--C------CG---
* * *
63463 AGACCGAGGGATGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTT---C
754 -GACCGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCC
*** * * *
63525 ---G----T---CGGAGCATTGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACAATCGAGG
818 GGGGACCATCGCCGGAGCATCACCGAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCG-GG
*
63580 GGGCCGGGGGGGGCTGTGCGCACAT
882 GGG-CAGGGGGGG-TGTGCGCACAT
*
63605 GATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * *
63670 ACTCACACCCCCTTAAAAAGCATTTGGGATTTTACAGGTTTGCTGCCGGTAGCCATTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
** *
63735 TGAAATGGGGACGTTTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAAT
131 TGAAATGGGGAC-ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT
* * *
63800 TTTTTTGTACATGCCAACAAAAATACAAGGATCATGTCTACCATGTTTGGGGCCAAAACTCCTTC
195 TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * * *
63865 CGAAAAAATTTTAAAAAAT-CTCGAACGGCAAAAAGTTTCGAATATCATGAAAAATAGAAAACGA
260 CGAAAAAATTTTAAAAAATCCT-AAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
*
63929 GTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
324 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
** * *
63994 AAATGGCATTAACACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTCAC
389 AAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * *
64059 GGCTTGCGCATCCCGTCTCTCTGGCGGGTGTAGTGCCCGCCAG-CCT-GCCCACCCGCTCGTTTC
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTC
* ** * * * * *
64122 GTCGGTTGGCTTAGGCAAACAAAGTTCATTCCCAGTCTAAGATCACATCGGACCT-AGGGTTACA
519 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGA-ATGAGGGTTACG
* ** * *
64186 GTAGCAGGATCGGTAGCACGCAGAGGGAGACCCGACCGATCCTCGGCTTGCGCATCCCGCCCCTC
583 GCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* *
64251 TGGCCGGCTGAGCGCCTGCA----CG-TTC----G-T---TT---CAT---GAGTT-A-----AC
648 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
* * * * *
64291 T-TAGGCATACGGAGTTCATTCCCAATCTAAGATTGGACCAGACCGAGGGATGC-GACAGCACAT
713 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAG-CAGCACAT
* * * * * *
64354 GCTGGGCTCAGGCATGTGTTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGAAGCATCGC
777 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCAC
* * * *
64419 CGGAGAACCTGATCGGCGACATTGGGGTTCCGGCGATCGGAGGGGCCAGGGGGGGTGTGCGCACA
841 CGAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGG-CAGGGGGGGTGTGCGCACA
64484 T
904 T
* *
64485 GATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * *
64550 ACTCACACCCTCTTAAAGAGCATTTGAGA-TTTATAGG-TTGCTG-C-GTAGCCATTAAAGTGTT
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * ** * *
64611 TGAAAT-GAGACGC-TTTGGCAAATGCTCAC-AAATCTTGTACACTTCGAGTTTTTAGCTG-A-C
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
*
64671 TTTTT-TGCATGCCAAC-AAAA-ACAA-GATCATGTCTA-CAAGTTTGGGGCCAAAACTCCTTCC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * * *
64731 GAAAAAATTTTAAAAAATCCCGAAACCGTTAAAAAGTTTCCAAAATCGTGAAAAATAAAAAACGA
261 GAAAAAATTTTAAAAAAT-CCTAAACCG-TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
* *
64796 GTCGTCTTGCCATGAAACTTCACGTGAAGGATTAAGGGACCATTGTATGAATTTACAAGCAATAA
324 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * * * * *
64861 AAATGTCATTGGCATGCAAAAATATGAAGACGTGCCTAAACCCACCGACCACCCTATCGATTCAC
389 AAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * *
64926 AGCTTGCGCATCCCGTCTCTCTGGTCGGCATAGTGCCCGCCCGCCCTCCAGCCCGCCCGCTCGTT
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCT-C-GCCCGCCCGCTCGTT
* * * ** * *
64991 TTGTCAGTTGGCTTAGGCATGCGGAGTTCATTCCCAGTCTAAG-TCAGACCAGACCGAGGTTTCC
517 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGAGGGTTAC
* * * * * * *
65055 GACAGCAGGATCGACAGCACGCAGAGAGGGACCCGGCCGATCCTCGGCTTACGCATCTCACCCCT
582 GGCAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCT
* * * *
65120 CTGGTCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATATGGAGTTCATTTCCA
647 CTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA
* * * *
65185 GTCTAAGCGTATGGAGTTCATTTCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGTAGCACAT
712 GTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACAT
* * * *
65250 GCTGGGCTTGGGCATGTGCTGGTGCCACATTTTTCTTCGCCTGGG--CA---CC---G--TCGCC
777 GCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGACCATCGCCGGAGCATCACC
* ** *
65305 GGAGAACCTGACCGATGGCA-TGGGGTTCCGACGATCAGGGGGCCAGGGGGGGTGTGCGCACAT
842 GAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCAGGGGGGGTGTGCGCACAT
65368 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * *
65433 ACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTATAGTGTT
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
*
65498 TGAAATGGGGACACTCTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * * * *
65563 GTTTTGTGTATGCCAATAAAAATACAAGGATCATGTCTACCAAGTTTGGGGTCAAAAATCCTTCT
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC-
* * * *
65628 C-AAAAAATTTTAAAAACTCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAG
260 CGAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAG
* *
65692 TCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-TA
325 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * *
65756 AATGCCATTGGCATGCAGAGATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
390 AATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
** * * * * * **
65821 GCTTGCGCATCCTATCTCTCTGGTCGACGTA----CTGCCC-TCCT-GCCCGCCCGCTTGTTTTT
455 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTCG
* * * *
65880 TCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCAG-ATCAATGGTTGCGG
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAAT-GAGGGTTACGG
* * * * * * * * * *
65944 CTGTAGGATCGGCAGCATGCAGAGGAGGACCCGCCCGATCCCCGGCTTGTGCATCTCACCCCACT
584 CAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * ** * ** * *
66009 GGCCAGCTGAGCACTTGCACGCTTGTTTCGTAAGTTGACTTGGGCATACGGAGTTCATTCCCAAT
649 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * * * * *
66074 CTAAGCATATGTAGTTCATTCCCAATCTAGGATCAGATCGGACCGAGGGTTGCGGCAGCACATTC
714 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGC
* *
66139 TGGGCTTGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCTGGGCACCATCGCC---G-------G
779 TGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCC-GGGGACCATCGCCGGAGCATCACCG
* * *
66194 -AGAACCTAACCGGCGGCATTGGGGTTTCGGCGATCGGGGGGCCAGGGGGGGTGTGCGCACAT
843 AAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG-CAGGGGGGGTGTGCGCACAT
66256 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * * *
66321 ACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCACTATAGTGTT
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
*
66386 TGAAATGGGGACACTCTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * * * *
66451 GTTTTGTGCATGCCAACAAAAATACAAGGATTATGTCTACCAAGTTTGGGGTCAAAAATCCTTCC
196 TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * *
66516 CAAAAAATTTTAAAAACTCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATA-AAACACGAG
261 GAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAA-ACGAG
* * *
66580 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCACTGTATGAATTTACAAGCCAT-TA
325 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAA
* * * **
66644 AATGCCATTGGCACGCAGAGATATGAAGATGTGCCGAAACCCACCTACCACCCTATCGATCCATA
390 AATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * * * * * *
66709 GCTTGTGCATCCCGTCTCTCCGGTCGGCGTAGTGCCCTCCTG--CTCGCCCGCCCGTTTGTTTTG
455 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTCG
* * * * *
66772 TTGGTTGGCTTATGCATACGAAGTTCATTCTCAGTCTAAGATCAGACCAG-ATCGAGGGTTGCGG
520 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAAT-GAGGGTTACGG
* * * ** * * * *** *
66836 TAGTAGGATTGGTAGCATGCAGAGGGGGACCCGCCCGATCCCCGGCTTGTGCATCTTACCCCACT
584 CAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCT
* * ** * *
66901 GGCCAGCTGAGCGCTCGCACGCTCGTTTCGTAAGTTGACTTGGGCATACGGAGTTCATTCCCAAT
649 GGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGT
* * * * *
66966 CTAAGCATACGTAGTTCATTCCCAATCCAGGATCGGACCGGACCGAGGGTTGC-GACAGCTCATG
714 CTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAG-CAGCACATG
* * *
67030 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCACTGGAGCATCACC
778 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCACC
* * * *
67095 GAAGAACCTGACCGACGGCATTGGGGTTCCGATGATCGGGGGGCCCGGGGGGGTGTGCGCACAA
842 GAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG-CAGGGGGGGTGTGCGCACAT
* * *
67159 GATGTACGATGGGAGCTGGTACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCGAGA
1 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * * * * * *
67224 ACTCACACCCCTTTAAAAAGCAGTTGATATTTTACAGGATTGTTGCCAGTAGCCACTAAAGTGTC
66 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
*
67289 TGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
131 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
* * *
67354 TTGTTTTTGCATGCCAACAAAAATATAAGGATCACGTCTACTAAGTTTGGGGCCAAAACTCCTTC
196 TT-TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC
* * * **
67419 TGAAAAAATTTTAAAAAATTCC-GAACCATAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGA
260 CGAAAAAATTTTAAAAAA-TCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGA
* *
67483 GTCGTCTTGCCATAAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
324 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAA
* * * *
67548 AAATGGCCTTGCCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATCGATCCAC
389 AAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * *
67613 GGCTTGCGCATCCCGGCTCTCTGGCCAGCGTAGTGCCCGCTCG-TC-CGCCCGCCCGCTCGTTTC
454 GGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTC
* * * ** ** ** * *
67676 ATCGGTGGGCATAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGACCGAGGATTACAG
519 GTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGAGGGTTACGG
* ** * * * *
67741 CAGCAGGATC-AGCAGCACGCAGACGGGGACCCGATTGATCCTCGCCTTGCGCATCGCTCCCCTC
584 CAGCAGGATCGA-CAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTC
* * *
67805 TAGCCGGCTGAGCGCCCACACGCTCGTTTCATGGGTTGACTTAGG----C--A--T-A-T---AG
648 TGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
** * * *
67857 ----AG--T------TT-ATTCCCAGTCTAAGATCGGATTGGACCGAAGGTTGCGGTAGCACATG
713 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATG
* * * **
67909 CTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATTGCC
778 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGG-ACCATCGCCGGAGCATCACC
*
67974 GAAGAACCTGACCGGCGACATTGGGGTTCCGACGATCGGAGGGGC
842 GAAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGC
68019 CATTAAAGTG
Statistics
Matches: 9908, Mismatches: 1215, Indels: 805
0.83 0.10 0.07
Matches are distributed among these distances:
840 8 0.00
841 122 0.01
842 8 0.00
843 1 0.00
844 4 0.00
845 3 0.00
846 8 0.00
847 6 0.00
849 2 0.00
850 1 0.00
851 1 0.00
852 4 0.00
853 2 0.00
856 28 0.00
857 93 0.01
858 208 0.02
859 2 0.00
860 347 0.04
861 157 0.02
862 108 0.01
863 1 0.00
864 24 0.00
865 129 0.01
866 70 0.01
867 266 0.03
868 9 0.00
869 12 0.00
870 182 0.02
871 303 0.03
872 36 0.00
873 20 0.00
874 9 0.00
875 393 0.04
876 26 0.00
877 10 0.00
878 24 0.00
879 168 0.02
880 129 0.01
881 58 0.01
882 1 0.00
883 116 0.01
884 39 0.00
885 48 0.00
886 66 0.01
887 634 0.06
888 650 0.07
889 69 0.01
890 189 0.02
891 43 0.00
892 411 0.04
893 69 0.01
894 151 0.02
895 145 0.01
896 369 0.04
897 266 0.03
898 198 0.02
899 259 0.03
900 225 0.02
901 5 0.00
902 152 0.02
903 894 0.09
904 639 0.06
905 293 0.03
906 286 0.03
907 6 0.00
908 2 0.00
909 2 0.00
910 4 0.00
913 6 0.00
914 22 0.00
915 7 0.00
916 5 0.00
917 198 0.02
918 426 0.04
919 31 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (904 bp):
GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
GAAAAAATTTTAAAAAATCCTAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGT
CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
ATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
CTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCTCGCCCGCCCGCTCGTTTCGT
CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAATGAGGGTTACGGCA
GCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGG
CCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
AAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGCAGCACATGCTG
GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGACCATCGCCGGAGCATCACCGAAG
AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCAGGGGGGGTGTGCGCACAT
Found at i:61680 original size:26 final size:26
Alignment explanation
Indices: 61644--61696 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
61634 GTTGACTTAG
61644 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
61670 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
61696 G
1 G
61697 ATCGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:63417 original size:26 final size:26
Alignment explanation
Indices: 63381--63455 Score: 141
Period size: 26 Copynumber: 2.9 Consensus size: 26
63371 ACTTAGGCAA
63381 ACGGAGTTCATTCCCAGTCTAAGCAT
1 ACGGAGTTCATTCCCAGTCTAAGCAT
*
63407 ACGGAGTTCATTCCCTGTCTAAGCAT
1 ACGGAGTTCATTCCCAGTCTAAGCAT
63433 ACGGAGTTCATTCCCAGTCTAAG
1 ACGGAGTTCATTCCCAGTCTAAG
63456 ATCGACCAGA
Statistics
Matches: 47, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 47 1.00
ACGTcount: A:0.25, C:0.27, G:0.20, T:0.28
Consensus pattern (26 bp):
ACGGAGTTCATTCCCAGTCTAAGCAT
Found at i:65198 original size:26 final size:26
Alignment explanation
Indices: 65168--65217 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
65158 GACTTAGGCA
65168 TATGGAGTTCATTTCCAGTCTAAGCG
1 TATGGAGTTCATTTCCAGTCTAAGCG
65194 TATGGAGTTCATTTCCAGTCTAAG
1 TATGGAGTTCATTTCCAGTCTAAG
65218 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.24, C:0.18, G:0.22, T:0.36
Consensus pattern (26 bp):
TATGGAGTTCATTTCCAGTCTAAGCG
Found at i:71300 original size:26 final size:26
Alignment explanation
Indices: 71264--71316 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
71254 GTTGACTTAG
71264 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
71290 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
71316 G
1 G
71317 ATCAGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:71991 original size:223 final size:223
Alignment explanation
Indices: 71596--72037 Score: 697
Period size: 223 Copynumber: 2.0 Consensus size: 223
71586 AAAGTGTCTG
* * * *
71596 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAGTGTT
1 AAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCAAGTTTTCAGATGAATGTT
* * *
71661 TTTGTGCATGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
66 TTTGTGCATACCAACAAAAATACAGGCATCACGCCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
* * *
71726 AAAAATTTAAAAAAATCTCGAACCGTAAAAAGTTTAAAAAATCGTGAAAAATAGAAAACGAGTCG
131 AAAAATTTAAAAAAATCTCGAACCGCAAAAAGTTTAAAAAATCATGAAAAATAGAAAACGAGTCA
*
71791 TCTTGCCATGAAACTTCAAGTGAAGGCT
196 TCCTGCCATGAAACTTCAAGTGAAGGCT
* *
71819 AAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCAAGTTTTCAGCTGAATTTT
1 AAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCAAGTTTTCAGATGAATGTT
* *
71884 TTTGTGCATACCAACAAAAATACAAGGCA-CATGCCTACCAAGTTTGGGGCCAAAACTCCTTCGA
66 TTTGTGCATACCAACAAAAATAC-AGGCATCACGCCTACCAAGTTTGGGGCCAAAACTCCTTCCA
** *
71948 AAAAAATTTTCAAAAATCTCGAACCGCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTC
130 AAAAAATTTAAAAAAATCTCGAACCGCAAAAAGTTTAAAAAATCATGAAAAATAGAAAACGAGTC
*
72013 ATCCTGCCATGAAACTTCACGTGAA
195 ATCCTGCCATGAAACTTCAAGTGAA
72038 CGCTTAAGGG
Statistics
Matches: 199, Mismatches: 19, Indels: 2
0.90 0.09 0.01
Matches are distributed among these distances:
223 195 0.98
224 4 0.02
ACGTcount: A:0.38, C:0.19, G:0.16, T:0.27
Consensus pattern (223 bp):
AAATGGGGACACTTTTTTCAAATGGTAACAAAATCTTGTACACTTCAAGTTTTCAGATGAATGTT
TTTGTGCATACCAACAAAAATACAGGCATCACGCCTACCAAGTTTGGGGCCAAAACTCCTTCCAA
AAAAATTTAAAAAAATCTCGAACCGCAAAAAGTTTAAAAAATCATGAAAAATAGAAAACGAGTCA
TCCTGCCATGAAACTTCAAGTGAAGGCT
Found at i:72404 original size:26 final size:26
Alignment explanation
Indices: 72368--72420 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
72358 GTTGACTTAG
*
72368 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATATAA
72394 GCATACGGAGTTCATTCCCAATATAA
1 GCATACGGAGTTCATTCCCAATATAA
72420 G
1 G
72421 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.32, C:0.25, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATATAA
Found at i:74004 original size:827 final size:816
Alignment explanation
Indices: 72394--74007 Score: 2421
Period size: 827 Copynumber: 2.0 Consensus size: 816
72384 CCCAATCTAA
* *
72394 GCATACGGAGTTCATTCCCAATATAAGATCGGACCAGATCGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAACATAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTAGG
* *
72459 CTCGAGCATGTGCTGGTGTCGCATTTTTCTTCGACGGGGCTCCATCCCTGGAGAACCTGACTGGC
66 CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCTCCATCCCTGGAGAACCTGACCGGC
* * * *
72524 AGCATTAGGGTTCCAGCGATCGGGGGGGCGGGGTGGTCTGTGTACATGATGTGCGATGGGTGCTG
131 AGCATTAGGGTTCCAACGATCGGGGGGGCGGGGAGGTCTGCGCACATGATGTGCGATGGGTGCTG
* *
72589 ATACTTGGCCCTTATATTGGCCCCCTATCCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAA
196 ATACTTGGCCCTCATATTGGCCCCCTATCCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
72654 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTATCTGAAATGGGGACACTTT
261 AAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATATCTGAAATGGGGACACTTT
72719 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATACCAAC
326 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATACCAAC
**
72784 AAAAATACAAGGATCATGTCTACCAAGTTTGGCTCCAAAACTCCTTCCCAAAAAATTTTAAAAAA
391 AAAAATACAAGGATCACATCTACCAAGTTTGGCTCCAAAACTCCTTCCCAAAAAATTTTAAAAAA
* *
72849 TCTCGAACCGTAAAAAGTTTGAAAAATAATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
456 TCCCGAACCGTAAAAAGTTTCAAAAATAATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
*
72914 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
521 TCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
* * *
72979 AGATATAAAGATGTGCCTAAACCCACCTACCACCCAATCGATTCATAGCTTGCCATCCCGTCTCT
586 AAATATAAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACAGCTTGCCATCCCGTCTCT
* * * *
73044 CTGGCCGGAGTAGTGCCCGCCCGCCCCGTCAGCCCGCTCGTTTCGTCGGTTGGCTTAGTCATACG
651 CTGGCCGGAGTAGTGCCCGCCCGCCCCG-CAGCCCACTCGTTTCATCCGTTGGCTTAGGCATACG
* *
73109 GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCAGCAGCAGGATTGGCAGCACGCA
715 GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGATGCAGCAGCAGGATCGGCAGCACGCA
73174 GAGGGGGTCCGCACGCTCGTTTCGTGGCTTGACTTAG
780 GAGGGGGTCCGCACGCTCGTTTCGTGGCTTGACTTAG
* * * *
73211 GCATACGGAGTTCATTCCCAGCCTAAGATCGGATCAGACCGAGGGTTGCGGTC-GCACATGCTGG
1 GCATACGGAGTTCATTCCCAACATAAGATCGGACCAGACCGAGGGTTGCGG-CAGCACATGCTAG
* * *
73275 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCTCCATCGTCGGAGCATCGCCGGAG
65 GCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCTCCATC--C----C-T----GGAG
* * * *
73340 AACCTGACCGGCGGCATTGGGGTTCCAACGATCGGGGGGCTGGGGGGAGGTGTGCGCACATGATG
119 AACCTGACCGGCAGCATTAGGGTTCCAACGATCGGGGGG--GCGGGGAGGTCTGCGCACATGATG
* *
73405 TGCGATGGGTGTTGGTACTTGGCCCTCATATTGGCCCCCTAT-CCCTCATCAAACCTCGAGAACT
182 TGCGATGGGTGCTGATACTTGGCCCTCATATTGGCCCCCTATCCCCTCATCAAACCTCGAGAACT
* *
73469 CACA-CCCCTTAAAAAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGA
247 CACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATATCTGA
* *
73533 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAATTTTT
312 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTT
* * * * * *
73598 TTGTGCATGCCAAGAAAAATACAAGGATCACATCTACCAAGTTTGG-TTCACAAACTCGTTTCGA
377 TTGTGCATACCAACAAAAATACAAGGATCACATCTACCAAGTTTGGCTCCA-AAACTCCTTCCCA
* **
73662 AAAAA-TTTAAAAAATCCCGAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
441 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATAATGAAAAATAGAAAACGAGTCG
73726 TCTTGCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
506 TCTTGCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * * *
73791 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATTGATCCACGGCT
571 GGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACAGCT
* * * *
73856 TGCGCATCCCGTCTCTCTGGCCGGCGTGGTGCCCGCCCGCCCAC-CCGCCTACTCGTTTCATCCG
636 TGC-CATCCCGTCTCTCTGGCCGGAGTAGTGCCCGCCCGCCC-CGCAGCCCACTCGTTTCATCCG
** * * * *
73920 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCGTGGGATGCAGCAGTA
699 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGATGCAGCAGCA
73985 GGATCGGCAGCACGCAGAGGGGG
764 GGATCGGCAGCACGCAGAGGGGG
74008 ACTCGACCGA
Statistics
Matches: 713, Mismatches: 67, Indels: 24
0.89 0.08 0.03
Matches are distributed among these distances:
817 99 0.14
818 1 0.00
819 1 0.00
823 1 0.00
824 1 0.00
827 275 0.39
828 251 0.35
829 26 0.04
830 58 0.08
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (816 bp):
GCATACGGAGTTCATTCCCAACATAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTAGG
CTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGACGGGGCTCCATCCCTGGAGAACCTGACCGGC
AGCATTAGGGTTCCAACGATCGGGGGGGCGGGGAGGTCTGCGCACATGATGTGCGATGGGTGCTG
ATACTTGGCCCTCATATTGGCCCCCTATCCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
AAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATATCTGAAATGGGGACACTTT
TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTGTGCATACCAAC
AAAAATACAAGGATCACATCTACCAAGTTTGGCTCCAAAACTCCTTCCCAAAAAATTTTAAAAAA
TCCCGAACCGTAAAAAGTTTCAAAAATAATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
TCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
AAATATAAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACAGCTTGCCATCCCGTCTCT
CTGGCCGGAGTAGTGCCCGCCCGCCCCGCAGCCCACTCGTTTCATCCGTTGGCTTAGGCATACGG
AGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGATGCAGCAGCAGGATCGGCAGCACGCAG
AGGGGGTCCGCACGCTCGTTTCGTGGCTTGACTTAG
Found at i:75897 original size:26 final size:26
Alignment explanation
Indices: 75868--75920 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
75858 GTTGACTTAG
**
75868 GCATACGGAGTTCATTCCTTGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
75894 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
75920 G
1 G
75921 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.25, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:76800 original size:26 final size:26
Alignment explanation
Indices: 76764--76816 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
76754 GTTGGCTTAG
*
76764 GCATACAGAGTTCATTCCCAGTTTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
76790 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
76816 G
1 G
76817 ATCAGACCGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.25, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:76820 original size:896 final size:895
Alignment explanation
Indices: 73211--77307 Score: 5617
Period size: 895 Copynumber: 4.6 Consensus size: 895
73201 CTTGACTTAG
* * *
73211 GCATACGGAGTTCATTCCCAGCCTAAGATCGGATCAGACCGAGGGTTGCGGTC-GCACATGCTGG
1 GCATAC-GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGG-CAGCACATGCTGG
* *
73275 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCTCCATCGTCGGAGCATCGCCGGAG
64 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCGGAG
* * *
73340 AACCTGACCGGCGGCATTGGGGTTCCAACGATCGGGGGGCTGGGGGGAGGTGTGCGCACATGATG
129 AACCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGGGC-CGGGGG-GGTGTGCGCACATGATG
* *
73405 TGCGATGGGTGTTGGTACTTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
192 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * *
73470 ACA-CCCCTTAAAAAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGAA
257 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
73534 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTAGCTGAATTTTTT
322 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * *
73599 TGTGCATGCCAAGAAAAATACAAGGATCACATCTACCAAGTTTGGTTCACAAACTCGTTTCGAAA
387 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGG-CCA-AAACTCCTTCCGAAA
*
73664 AAA-TTTAAAAAATCCCGAACTGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
73728 TTGCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
515 TTGCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
** * *
73793 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATTGATCCACGGCTTG
580 CATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * * *
73858 CGCATCCCGTCTCTCTGGCCGGCGTGGTGCCCGCCCGCCCACCCGCCTACTCGTTTCATCCGTTG
645 CACATCCCCTCTCTCTGGCCGGCGTTGTGCTCGCCCG-CCA---GCC-GCTCGTTTCGTCGGTTG
* * * * * *
73923 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCGTGGGATGCAGCAGTAGGA
705 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGA
* * * * *
73988 TCGGCAGCACGCAGAGGGGGACTCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACC
770 TCGGCAGCACACAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * *
74053 GAGCACACGCACGCTCATTTCGTGGGTTAACTTAGGCATACGGAGTGCATTCCCAGTCTAA
835 GAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
74114 GCATACGTAATTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACG-AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** * * * **
74179 CTCGATCATGTGCTGGTGCCACATTTTTCTTCCCCAGGGCACCATCG-CAGGAGCATCTTCGGAG
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTC-GGAGCATCGCCGGAG
* * * *
74243 AACCTGACCGGCGGCATTGGGGTTTCGACAATCGGGGGG-CTGGGGAGTGTGGGCACATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
** *
74307 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCTGCTATCCCTCATCAAACCTCAAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
74372 ACCCCGTTAAAGAGCATTTGAGATTTTATAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
*
74437 GGGGACACTTTTTTCAAATGGTCACAAAATCTTTTACACTTCGAGTTTTTAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * * * * *
74502 TGCGTGCCAAAAAAAATACAATGATCATGTCCACCAAGTTTGGGAACAAAACTCCTTCCAAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GG-CCAAAACTCCTTCCGAAAAA
* *
74567 ATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* *
74632 GCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTAAAAGCCACAAAAATGGCA
517 GCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
74697 TTGGCCCACAGAAATATGAAGAGGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCA
582 TTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCA
* * * * * * * **
74762 CGTCCCGTCTCTTTGGCCGGCGTAGTAC-CTGCCTGCCCGTCCGCTCGTTTCGTCAATTGGCTTA
647 CATCCCCTCTCTCTGGCCGGCGTTGTGCTC-GCCCGCCAG-CCGCTCGTTTCGTCGGTTGGCTTA
** * * *
74826 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGTAGCAGGATTGGT
710 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGC
* * *
74891 AGCACACAGAGGGGGACCCGACCGATCCCCGACTTGCACATCCCTCCCCTCTGGCCGGTTGAGCG
775 AGCACACAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * * ***
74956 CCTGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTTTTAGTCTAA
840 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
75012 GCATACGAAGTTCATTCCCAATCTAAGATTGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACG-AGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
75077 CTCGGGCATGTGCTGCTGCCACATTTTTCTTCGCCGGGGCATCATCGTCGGAGAATCGTCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
75142 ACTTGACCGGCGGCATTGGGG-TTCCAGCGAT--------CGGGAGGGTGTGCGCACATGATGTG
130 ACCTGACCGGCGGCATTGGGGTTTCGA-CGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
* *
75198 CGATGGGTGC---TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAGCTCAAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
75260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
**
75325 -GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTAAGTTTTTAGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* **
75389 TGCATGCCAACAAAAATACAAGGATCATGTCTAAAAAGTTTGGGGCCAAAACTCCTT-CGAAAAA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT--GGCCAAAACTCCTTCCGAAAAA
* * * *
75453 ATTTTAAAAAATCTCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCTT
452 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* * * * *
75518 GCCATGAAACTTCACGTGAAGGATTAGGGGACCATTGTATGATTTTACAAGCCATAAAAATCGCA
517 GCCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * *
75583 TTGGCACATAGAAATATGAACATGTGCCTAAACCCACCTACCACCCTATTGATCCATGTCTTGCA
582 TTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCA
* * *
75648 CATCCCGC-CTCTCAGGTCGG-GTTGGTGCTCGCCCG-C--CCGCTTGTTTCGTCGGTTGGCTTA
647 CATCCC-CTCTCTCTGGCCGGCGTT-GTGCTCGCCCGCCAGCCGCTCGTTTCGTCGGTTGGCTTA
* ** * * * * *
75708 GGCATACGGAGTTCATTCCCAGTCTAAGATTGGACTGGACTGAGGGTTACAACAGCAGGATTGAC
710 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGC
* * * * *
75773 AGCATC-TAGAGGGGGACCCGACCGATCCCCGATTTGTGCGTCCCGCCCCTCTGGCCGGTTGAGC
775 AGCA-CACAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGC
* * **
75837 GCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCTTGTCTAA
839 GCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* **
75894 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTATGGCAGCACATGCTGGG
1 GCATAC-GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
75959 CTCGGGCAGGTGTTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATTGCCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * *
76024 ACCTGACCGGCGGCTTTAGGGTTTCGACGATCGGAGGGGCCGGGGGGGTGTGCGCACAAGATGTG
130 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGG-GGGGCCGGGGGGGTGTGCGCACATGATGTG
* * * *
76089 CGATGGGTGCTGGTACTTGACCCCTATATTGGCCCCCTATCCCTCAACAAACCTCGAGAACTCTC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
76154 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTATGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
**
76219 GGGGACA-TGTTTTTCAAATGGTCACAAAATCTTGTACACTTAAAGTTTTTAGCTGAATTTTTTT
324 GGGGACACT-TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
76283 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG-TT-GCCAAAACTCCTTCCGAAAAAA
388 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGCCAAAACTCCTTCCGAAAAAA
* * *
76346 TTTTAAAAAATCTCGAACCGTAAAAATTTTCAAAAATCGTAAAAAATAGAAAACGAGTCGTCTTG
453 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
76411 CCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
518 CCATGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
** * * * *
76476 TGGCATGCAGAAATATGAAGATGTGCCCAAACCCACCCACCACCCTATCGATCCAAGGCTTGCGC
583 TGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCAC
*
76541 ATCCCCTCTCTTTGGCCGGCGTTGTGCTCGCCCGCCAGTCCGCTCGTTTCGTCGGTTGGCTTAGG
648 ATCCCCTCTCTCTGGCCGGCGTTGTGCTCGCCCGCCAG-CCGCTCGTTTCGTCGGTTGGCTTAGG
* ** *
76606 CATACGGAGTTCATTCCCAGTCTACGATCGGACCAGACCGAGGGTTGTGGCAGCAGGATCGGTAG
712 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAG
* *** * * *
76671 CACACAGAGGGGAACCCGGTTGATCCCCGGCTTGTGCATCTCGCCCCTCTGGCCGGCTGAGCGCC
777 CACACAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
* * *
76736 CGCACGCTCATTTCGTGGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTTTAA
842 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
76790 GCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGAACCGAGGGTTGTGGCAGCACATGCTGGG
1 GCATAC-GAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * * *
76855 CTCGAGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGAAGCATCGCCAGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCGGAGA
* * * * *
76920 ACCTGATCGACGGCTTTGGGGTTCCTACGATCGGGGGAGCC-GGGGGGTGTGCGCACATGATGTG
130 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGG-GCCGGGGGGGTGTGCGCACATGATGTG
* * *
76984 GGATGGGTGCTGGAACTTGGCCCTTATATTGGCCTCCTATCCCTCATCAAACCTCGAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
77049 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAAT
259 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
** * *
77114 ATGGACACGTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTG
324 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* ** *
77179 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCTAAAACCCCTTTTGAAAGA
389 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGCC-AAAACTCCTTCCGAAAAA
* * * * *
77244 ATTTTAAAAAATCCTGAACCATAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCGTCT
452 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
77308 GGCCCTCTGG
Statistics
Matches: 2837, Mismatches: 312, Indels: 94
0.87 0.10 0.03
Matches are distributed among these distances:
882 317 0.11
883 6 0.00
885 3 0.00
886 204 0.07
887 108 0.04
888 113 0.04
891 78 0.03
892 208 0.07
893 4 0.00
894 113 0.04
895 339 0.12
896 332 0.12
897 4 0.00
898 315 0.11
899 73 0.03
900 78 0.03
901 179 0.06
902 216 0.08
903 147 0.05
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (895 bp):
GCATACGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGTCGGAGCATCGCCGGAGAA
CCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGCCAAAACTCCTTCCGAAAAAATTT
TAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCACATC
CCCTCTCTCTGGCCGGCGTTGTGCTCGCCCGCCAGCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
CGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCAGCAGCAGGATCGGCAGCACA
CAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
CGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:77396 original size:26 final size:26
Alignment explanation
Indices: 77360--77411 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
77350 TTGGCTTAGA
77360 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGGAGTTCATTCCCAGTCTAAG
77386 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACGGAGTTCATTCCCAGTCTAAG
77412 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.27, G:0.19, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAGTCTAAG
Found at i:80027 original size:26 final size:26
Alignment explanation
Indices: 79998--80048 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
79988 TGACTTAGGA
*
79998 ATACGGAGTTCATTCCCAGTTTAAGC
1 ATACGGAGTTCATTCCCAGTCTAAGC
80024 ATACGGAGTTCATTCCCAGTCTAAG
1 ATACGGAGTTCATTCCCAGTCTAAG
80049 ATCGAACCGG
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.24, G:0.20, T:0.29
Consensus pattern (26 bp):
ATACGGAGTTCATTCCCAGTCTAAGC
Found at i:82691 original size:26 final size:26
Alignment explanation
Indices: 82655--82706 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
82645 ATGACCTAGA
82655 CATACAGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
*
82681 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTCATTCCCAGTCTAAG
82707 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAGTCTAAG
Found at i:84443 original size:26 final size:26
Alignment explanation
Indices: 84407--84459 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
84397 GTTGGCTTAG
84407 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
84433 GCATACGGAGTTCATTCGCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
84459 G
1 G
84460 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:85320 original size:26 final size:26
Alignment explanation
Indices: 85290--85342 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
85280 GTTGACTTAG
*
85290 GCATACGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTCCATTACCAGTCTAA
*
85316 GCATACGGAGTCCATTCCCAGTCTAA
1 GCATACGGAGTCCATTACCAGTCTAA
85342 G
1 G
85343 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.26, G:0.21, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTCCATTACCAGTCTAA
Found at i:85869 original size:894 final size:893
Alignment explanation
Indices: 81916--98468 Score: 20998
Period size: 894 Copynumber: 18.7 Consensus size: 893
81906 CATCGCCGGT
* * *
81916 GGCATTGGGGTTTCGACAATCAGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
1 GGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
*
81981 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAA
65 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * * *
82046 GAGCATTTGACATTTTATAGGTTTGCTGCCAATAGCCATTAAAGTGTCTGAAATGGGGACATTTT
130 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* * *
82111 TTTCAAATGGTCACAAAATGTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
195 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * * * * * *
82176 AAAAATAAAAGGATCATGTCTTCCAATTTTGGGGCCAAAACTCCTTCTGGAAAAATGTTAAAAAA
260 AAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
** * *
82241 TCCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
324 TCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * *
82306 TAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACCG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
* * * *
82371 AAATATGAAGATGTACCTAAACCCACCTACAACCCTATCGATTCACGACTTGCGCATCCCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * *
82436 TCTGGCCGACGTAGTGCCCGCTCGCCCGCCCGCTCGATTCGTCAGTTGGCTTAGGCATACGGAGT
519 TCTGGCCGGCGTAGTG--C-C-CGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
* * * * * * *
82501 TCATTCCCAATCTAAGATCGGACCGGACCGGACCGAGGGTTGCGGTAGTAGGATCAGTAGCATGC
580 TCATTCCCAGTCTAAGATC--A---GACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGC
* * * *
82566 AGAGGGGGACCCGACCGATCCCTGGCTTGCGCATCCCGCCCTTCTGGCCGGCTGAGCGCGCACAC
640 AGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* * * *
82631 GCTCGTTTCGTGGGATGACCTAGACATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
705 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* * * * *
82696 CCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGTAGCACATGCTGGGCTTGGGCATGTGCTGA
770 CCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGG
* ** * *
82761 TGTCGCATTTTTCTTTGCCGGGGCACCATCGTCGGAGCATCGTCGTAGAACCTGACCGAC
835 TGCCGCATTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
* *
82821 GACATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
82886 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* *
82951 AGCATTTGAGATTTTACAAGTTTGCTGCCAGTAG-AATTAAAGTGTCTGAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* *
83015 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTGAGCTGAATTTTTTTTTGCATGCCAACA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* * * **
83080 AAAATACAAGAATCATGTCTACCAAGATTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAG-TTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * * *
83145 CCCGAACCGTAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * ** **
83210 CACATGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATATCATTGGCACATAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
*
83275 AATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * *
83340 CGGGTCGACGTAGTGCCCGCCCGCCCGCTCGTTTCATCGGTTAGCTTAGGCATAGGGAGTTCATT
520 CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
** * * *
83405 CCCAGTCTAAGATTGGACCAGACTGAGGGATGCAGCAGCA-GA-CTGGCAGCACGCAGAGGGGGA
585 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATC-GGCAGCACGCAGAGGGGGA
* * * * *
83468 CCCGACCAATCCCCGGCTTGCGCATCTCGCCCCTTTGGTCGGCTGAGCGTCCGCACGCTCGTTTC
649 CCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTC
83533 GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A--C--
714 GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTA
* **
83581 ---T-GGACC-G---G-GGATTGCGGTGGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
779 AGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
* * *
83637 TTTCTTCATCGGGGCACCA---C----CA---CCGGAGAACCTAACCAAC
844 TTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
*** * * * *
83677 AAAATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGTGTGCACGCATGATGTGCGATGGGTGCTA
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
*** * * *
83742 GTACTTGGCCCTTATATTGGCCATATATCCCTCATCACACCTTGAGAACTCACACCCCCTTAAAA
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * * * *
83807 AGCATTTCAAATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTAAAATGAGGACAC-TTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
*
83871 TTCAAATGGTCACAAAATCTTGTACACTTCTAGTTTTTAGCTGAAATTTTTTT-TGCATGCCAAC
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTTTGTGCATGCCAAC
* * * **
83935 AAAAATACAAGAATCATGTCTACCAAGATTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAAA
260 AAAAATACAAGGATCACGTCTACCAAG-TTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* *
84000 TCCTGAACCGCAAAAAGTTTCAAAAATCGTAAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
324 TCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * ** **
84065 TCACATGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATATCATTGGCACATAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
84130 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * ** * *
84195 TCGGGTCAACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATAGGGAGT
519 TCTGGCCGGCGTAGT----GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
** * * * * *
84260 TCATTCCCAGTCTAAGATTGGACCAGACCGAGGGATACGGCAACA-GACCGACAGCACGCAGAGG
580 TCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGG
* * * *
84324 GGGACCCGACCAATCCCCGGCTTGCGCATCCTGCCCCTTTGGTCGGCTGAGCGCCCGCACGCTCG
645 GGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCG
* *
84389 TTTCGTGGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCGCAG
710 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
* * * *
84454 TGTAAGATCGGATCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTAGTGCGG
775 TCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
*
84519 CATTTTTCTTCATCGGGGCACCATCGC----CA------GAGAACCTGACCGAC
840 CATTTTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
*** * * *
84563 ATAATTGGGGTTTCGACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGAGCGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* *
84628 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCCAACCTCGAGAACTCACACCCCTTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* *
84693 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTCTATGAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * *
84758 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCTTGCCAAAA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* *
84823 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTTCG-AAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * ** * * *
84887 -CTCGAACAGCAAAAAGTTTCAAAAATCGTGAAACGTAAAAAATGAGTCATCTTGCCATGAAACT
325 CCT-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
*
84951 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
85016 AAATATGAAGATGTGACC-AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
454 AAATATGAAGATGTG-CCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
* * * * *
85080 CTCTGGCCGACGTAGTGCCCTCCCGCCCACTCGTTTCGTTGGTTGGCTTAGGTATACGGAGTTCA
518 CTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * * *
85145 TTCCCAGTCTAAGATCAGACC-GAACCGAAGGTTACAGCAGCAGGATTGGTAGCACACAGAGGGG
583 TTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGG
* * * * * *** *
85209 GACCCCACTGATCCTCGGCTTGCACATCCTGCCCCTCTGGCCGGCTGAGCGTGTGCACGGTCGTT
647 GACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTT
* * *
85274 TCATGGGTTGACTTAGGCATACGGAGTTCATTACCAGTCTAAGCATACGGAGTCCATTCCCAGTC
712 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTC
* * * *
85339 TAAGATCGGATCGGACCAAGGGTTGAGGCAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCGCA
777 TAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
** * * *
85404 TTTTTCTTCATTGGGGCACCATCGACAGAGTATCGCCGGAGAACCTGACCGGC
842 TTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
* * *
85457 GGCATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGATGTGTGATAGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* *
85522 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCA-AAAACCTCGAGAACTCACACCCCATTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * *
85586 AGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTCAAATGGGGACACATTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * *
85651 TTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTATGCATGCCATCA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* * * *
85716 AGAATACAAGGATCATGTCCACCAAGTTTATGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
** * * * * *
85781 CCTGAACCTTAAAAAGTTTCAAAAATCGTCAAAAATAGAAAACGAGTCATCTTGTCGTGAAACTT
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* **
85846 CACGTGAAGGCTTAGGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCTTGCAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
* * *
85911 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAATCCACAGCTTGCGCACCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * *
85976 CTGGCCGGTGTAGTGCCTGCCCACCCGCTCGTTTCGTAGGTTGGCTTAGGCATACGGAGTTCATT
520 CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * *
86041 CCCGGTCTAAGATCAGACCAGACCAAGGGTAGTGGCAGCAGGATCGGTAGCACGCAGAGGGTGAC
585 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGAC
*** * ** * * *
86106 CCGGTTGATCCCCAGCTTGCTTATCCTGCCCCTCTGGTCGGCTGAGCGCCCGCACGGTCGTTTCG
650 CCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
86171 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
715 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
86236 GATCGGACCGGACTGAGGGTTGCGGTAGCCCATGCTGGGCTCGAGAATGTGCTGGTGCCACATTT
780 GATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
* * *
86301 TTCTTCACCGGGGCACCATCGCCGGAGCATCGTCAGAGAACCTAACCGAC
845 TTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
** *
86351 GGCATT-GGGTTCC-AGCGATCAAGGGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGC
1 GGCATTGGGGTTCCGA-CGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGC
* * * *
86414 TCGTACTTGGCCCTTATATTGGCCCCCTATCCGTCATCAAACCTCGAGAACGCACTCCCCCTTAA
64 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
*
86479 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTT
129 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
* * * *
86544 TTTTCAAATGGTCACAAAATCTTGTTCACATCGAGTTTTTAGCTGACTTTTTTTGTCCATGCCAA
194 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* * * *
86609 CAAAAATACAAGGATCACATCTACCAAGTTTGGTGCCAAAACTCTTTCTGAAAAAATTTTAAACA
259 CAAAAATACAAGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * * *
86674 ATCCCGAACCGCAAAAAAGTTTCAAAAATCATGAAAAATAAAAAACTAGTTGTCTTGCCATGAGA
323 ATCCTGAACCGC-AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
*
86739 CTTCACGTGAAGGCTTAAGCGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGC
387 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGC
* *
86804 AGAAATATAAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCA-------
452 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * ** *
86862 ----T--CC-ACGTAGAGCTCGCTAGCCCGCTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTC
517 TCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
** * * * * * *
86920 ATTCCCAGTCTAAGATCAGACCAGACCGAGCATTGCGGCATCAAGTTCAGAAACACGCAGAGGGG
582 ATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGG
* * * * * * *
86985 GACCCGATCGATCCTCGGCTTGCGCAACCCACCCCTCTGGCCGGCTGAGC-ACCGAAACACTCGT
647 GACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG-CACGCTCGT
* * *
87049 TTCATGGGTTGACATAGGCATACGGAGTTCATTCTCAGTCTAAGCATACGGAGTTCATTCCCAGT
711 TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGT
* * * *
87114 CTAAGATCGTACAGGATCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGC
776 CTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGC
* * *
87179 ATTTTTCTTCGCCGGGGCACCAT--C---GCA-----GGAGAACCTGATCGGC
841 ATTTTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
* * * * *
87222 GGTATTGAGGTTCCGACGATCGGAGGGGCCGGGGGGGTGTGCACACATGATGTACGATGGGTGCT
1 GGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
87287 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
65 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
87352 GAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTT
130 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
87417 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAAC
195 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * * *
87482 AAAAATACAAGGATCACATCTACCATGTTTGGGGCCAAAACACCTTCCAAAAAAATTTTAAAAAA
260 AAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
* * *
87547 TCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGTCTTGCCATGAAACT
324 TCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * **
87612 TCACGTGAAGGCTTAAGGGACCATTGTATCAATTTACAAGCCATAAAAATGGCATTGGGATACAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
87677 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* *
87742 TCTGGCCGGCGTAGTGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCAT
519 TCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * *
87807 TCCCAGTCTAAGATCAGACCGGACCGAGGGATGCGGTAGCAAGATCAGCAGCATGCAGAGGGGGA
584 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGA
* * * * *
87872 CCCAATCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGACTGAG-GACCCACACGCTCGTTT
649 CCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG-CCCGCACGCTCGTTT
* * * * *
87936 CATGGGTTGACTTAGTCATACGGAGTTCATTCCCAATCTAAGCATACGGGGTTCATTCCCAATCT
713 CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCT
* * *
88001 AAGATCGGACCAGACCGAGGGTTGCGACAGCACATTCTGGGCTCGGGCATGTGCTGGTGCCGCAT
778 AAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCAT
* * **
88066 TTTTCTTCGCCGGGGCACCAT-------CAT---CAGAGAACCTGACCGGT
843 TTTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
* *
88107 GGCATTGGGGTTCCGGCGATC-GGGGGG-CTGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
** * *
88170 GTACTTGGCCCTTATATTGGCCCCCTATTGCTCATCTAACCTTGAGAACTCACACCCCCTTACAA
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA-AA
88235 -AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
130 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
*
88299 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGGTTTTAGCTGAATTTTTTTGTGCATGCCAAC
195 TTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC
* * *
88364 AAAAATATAAGGATCACGTCTACCAAGTTTGGAGCCAAAACTCCTTCTGAAAAAATTTTCAAAAA
260 AAAAATACAAGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
** *
88429 TCCAAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
324 TCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* *
88494 TCACGTGAACGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
** * * *
88559 AAATATGAAGATGTGGTTGAACCCACCTGCCACCCTATCGATCCACGGCTTGCGCATCTCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * *
88624 TCTGGCCGGCGTAGTGCCTGCCCGCCCGTCCTTCCGCCCGTTTCATCGGTTGGCTTTGGCATACG
519 TCTGGCCGGCGTA--G--TGCCCGCCCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * * ** *
88689 GAGTTCATTCCCAGTCTATGATCGGACC-GAACTGAGGGTTGCGGTGGCAGGATCGAG-AGCACA
576 GAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGCGGCAGCAGGATCG-GCAGCACG
* * * ** * * *
88752 CAGAGCGGGACCCGGCCAATCCCCGG-TTGCGCATCCTACCCCTCTGGCCAGCTGAACGCTCGCA
639 CAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCA
88816 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCAT
704 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCAT
* * * * * ** *
88881 TCCCAGTCAAAGATCAGACCAGACCGAGGGTTACGGTAGCACATGCTGGGCTCGAACATGTGCTA
769 TCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTG
* * * *** * ** *
88946 GTGTCGTATTTTTGTTTGTCGGGG---CA---C----CATCGCCGGAGAACTTGATTGGC
834 GTGCCGCATTTTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
* * * *
88996 AGCATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACGTAATGTGCGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* * *
89061 GTTCTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
89126 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * *
89191 TTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCGTACCAACA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* * ** * *
89256 AAAATACAAGGGTCACATCTAATAAGTTTGGGGCCAAAAATCCTTCCAAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
** * * * * *
89321 CCCAAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAAAAAAGGAGTCGTCTCGCCATGAAAC-T
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
*
89385 ----T-----C---AGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGCCACGCAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
*
89438 AATATGAAGATGTGCCTAAACCCACCTACCATCCTATCGATCCACGGCTTGCG-ATCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * *
89502 CTGGCCGACGTAGAGCCCGCCAGCCCGCTCGTTTCGTGGGTTGGCTTAGGTATACGGAGTTCATT
520 CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * * * * *
89567 CCCATTCTAAGATCAGACCGGACTGAGCGTTGTGGCATCAGGATCGGTAGCACACAAAGGGGGAC
585 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGAC
* * * * * ** *
89632 CTGGCCGATCCCCGGATTGCGCATCTCGCCCCTCTGGCCGACTGAGCGCCCAAACGCTCGTTTCA
650 CCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
* * * *
89697 TGGGTTGACTTAGGCATACGGAGTTCATTCTCAGTCTAAGCATACGGAGTTCACTCCCAGCCTAG
715 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * *
89762 GATCGTACAGGACCAAGGGTTG-GGACATAACATGTTGGGCTCGGGCATGTGCCGGTGCCGCATT
780 GATCGGACCGGACCGAGGGTTGCGG-CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATT
* * *
89826 TTTCTTCATCGGGGCACCAT--C---G--T---CGGAGAACCTCACCGGC
844 TTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
* * * * * * *
89866 GGTATTGGGGTTCCGACAATCGGGGGGGTCGGGGGATGTGCACACATAATGTGTGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
89931 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
*
89996 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* *
90061 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTGCATGCCAAAA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
** * * * *
90126 AAAATACAAGGATCAAATCTACCAAGTTTGGGGCAAGAATTCCTTTCGAAAAAATTTGAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTTGGGCCAA-AACTCCTTCCGAAAAAATTTTAAAAAAT
* * * *
90191 CCTGAACCGTAAAAAGCTTCAAAAATCATGAAAAGTAGAAAACGAGT-TTCTTGCCATGAAACTT
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * *
90255 CACGTGAAGGCTTAAAGGACCATTGTATGAATTTATAAGCCATAAAAATGGCATTGGCATGCAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
* * * * *
90320 AATAAGAAGATGTGCCTGAACCCACCTACCACCCTATCGATCCACAGCTTACGCATCCCGTCCCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * *
90385 CTGACCGGTGTAGTGCCCGCCCGCCCGCCCGCTTGCTCGTTTCGTAAATTGGCCTAGGCATACAG
520 CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCG-TT--TCG--TCG---GTTGGCTTAGGCATACGG
* * *** * * * * * *
90450 AGTTTATTCCCAGTCTAAGATCGGATTGGACTGAAGGTTGCAGTAGCAGGATCGACAACACGCAG
577 AGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* * *
90515 AGGGGGACCCAACCGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGCACGC
642 AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
* *
90580 TCGTTTCGTGGGATGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTTC
707 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * *** * *
90645 CAGTCTAAGATCAGACCGGACCAAGGGTTGCAATAACACATGCTGTGCTCGGGCATGTGCTGGTG
772 CAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * * * *
90710 TCGCATCTTTCTTCATCGGGGCACCATCACCAGAGCATCGTCGGAGAACCTGACCGAC
837 CCGCATTTTTCTTCACCGGGGCACCATC-GCGGAGCATCGCCGGAGAACCTGACCGAC
** * * ** *
90768 GGCATTGGGGTTCCGGTGATCGGGGGGGCAAGGGTGGGTTTATGCACATGATGTGCGTTGGGTGC
1 GGCATTGGGGTTCCGACGATCGGGGGGGC-CGGG-GGGTGTGCGCACATGATGTGCGATGGGTGC
*
90833 TGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCAAACCTCGAGAACTCACACCCCCTTAA
64 TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
* *
90898 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTAAAATGGGGACACTT
129 AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
*
90963 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTGAGCTGAATTTTTTTGTGCATGCCAA
194 TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
* *
91028 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCAAAACTCCATCCGAAAAAATTTTAAAAAA
259 CAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
*
91093 TCCTGAACCGCAAAAAGTTTC-AAAATCATGAATAATAGAAAACGAGT-GTCTTGCCATGAAACT
324 TCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
** * * * *
91156 TCACAAGAAGGTTTAAGGGACCATTCTATAAATTCACAAGCCATAAAAATGGCATT-GCACGCAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
* * *
91220 AAATATGAAGATGTGCCTAAACCC-CCTACCACCCTATCGATCCACGACTTACGCATCCCGTTTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * *
91284 TCTGACCGGCGTAGTGCTCGCCCGCCCGTCCGTCCGCTCGTTTTGTCGGTTGACTTAGGCATACG
519 TCTGGCCGGCGTA--G-T-GCCCGCCCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * *
91349 GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGTAGCAGGATTGGCAGCACGCA
576 GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCA
* * * *
91414 GAGGGGGACCCGACCGATCCCCGGCTTGTG-ATCCCGCCCCTCTGGCCTGTTGAGCACCCGCACG
641 GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
*
91478 CTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-T---GAG-------
706 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* *
91527 --A---T----T-GGACCGGACTGAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
771 CCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* *
91582 GCCGCATTTTTCTTCACTGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGAC
836 GCCGCATTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
* *
91641 GGCATTGGGGTTCCGATGATCGGGGGGGGCCGGGGGGGTGTGCGCACGA-GATGTGTGATGGGTG
1 GGCATTGGGGTTCCGACGATC-GGGGGGGCC-GGGGGGTGTGCGCAC-ATGATGTGCGATGGGTG
* * *
91705 CTAGTACTTGGCCCTTATATTGGTCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTA
63 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
*
91770 AAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
128 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
* * *
91835 TTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTTTGCACGCCA
193 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* *
91900 ACAAAAATACAAGGATCACGTCTACAAAGTTTGGTGCC-AAACTCCTTCCGAAAAAATTTAAAAA
258 ACAAAAATACAAGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * *
91964 AATCCCT-AAGCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAA
322 AAT-CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* * * * *
92028 ACTTAACGTGAAGGCTTAAGCGACCATTTTATGAATTTACAAGTCATAAAAATGGCATTGGCACA
386 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
* * * * *
92093 CAGAAATATAAAGATTTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTTGCGTATCCTGT
451 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * *
92158 CTCTCTGGCCGGCATAGTGCCCGCCCGCCCGCTCACTCGTTTCATCGGTTGGCTTAGGCATGCGG
516 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG----CTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * * * * ** * *
92223 AGTTCATTCCCAGTCTAAGATGAAACCAGACTGAGGGTTGCGGTAGCGGGATTTGCAGCACACAT
577 AGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* ** * * * * *
92288 AGGGGGACTCGGTCGATCCCCGGCTTGTGCATCCCGTCCCTCTTGCCAGCTAAGCGCCCGCACGC
642 AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
* * * * *
92353 TCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCTAGTTTAAGCGTGCGGAGTTCATTCC
707 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * * * *
92418 CAGTCTAAGATCAGACCGGACCAAGGGTTGCGGCAACACATGCTGGGCTCGGGCATGAGCTGGTT
772 CAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
*** * * *
92483 TTACATTTTTCTTCACCGGGGCACCATCCCCGGAGCATCGTCGGAGAACCTAACCGAC
837 CCGCATTTTTCTTCACCGGGGCACCAT-CGCGGAGCATCGCCGGAGAACCTGACCGAC
* ** * * * * * *
92541 GGCATTGGGGTTTCGGTGATCAGAGGGTCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTA
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* * *
92606 GTACTTGGCCCTTATATTGGACCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCTTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
*
92671 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTC
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * *
92736 TTCAAATGGTCGCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAAAA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* *
92801 AAAATACAAGGATCACGTCCACCAAGTTTGGCGCCAAAACTCCTTCCAAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * * *
92866 CTTGAACTGTAAAACGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* *
92931 CACGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAAA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
*
92996 AATATAAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * *
93061 CTGGCTGGCGTAGTGCCTGCCCGCCCTCCCGCCCGTTCGTTTCATTGGTTGGCGTAGGCATATGG
520 CTGGCCGGCGTA--G--TGCCCG----CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
** * *
93126 AGTTCATTCCCAGTCTAAGATTGGATCAGACCGAGGGTTGC-G-A-C----T-----GCACGTAG
577 AGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* * * ** * * * *
93179 AGAGGGACCC-AGTCGATCCCCAGCTTGCGCATCGTGCCCATCTAGCCGACTAAGCGCCCGCACG
642 AGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* * * *
93243 CTCGTTCCGTGGGTTGATTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATGCGGAGTTCATTC
706 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* * * *
93308 CCAGTCTAAGATCGGATCAGACCAAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
771 CCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * * * * *
93373 GCCACATTTTACTTCACCAGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACAGGC
836 GCCGCATTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
** * *
93432 GGCATTGGGGTTCCGGTGATC-GGGGGGCTAGGGGGGTGTGCGCACATGATGTGTGATGGGTGCT
1 GGCATTGGGGTTCCGACGATCGGGGGGGC-CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT
* * *
93496 GGTACTTGGCCCTTATATTGGCCCCGTATCCCTTATCAAACCTCAAGAACTCACACCCCCTTAAA
65 GGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* * *
93561 GAGCATTTGAAATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGCGACACTTT
130 GAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTT
* *
93626 TTTCAAATGGTTACAAAATCTTGTACACTAT-GAGTTTTTAGCTGAATTTTTTTGTGCGTGCCAA
195 TTTCAAATGGTCACAAAATCTTGTACACT-TCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
*
93690 CAAAAATACAAGGATCACGT-T-----GTTTTGGGGCCAAAACTACTTCCGAAAAAATTTTAAAA
259 CAAAAATACAAGGATCACGTCTACCAAG-TTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * *
93749 AAT-CTCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAA
322 AATCCT-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* * *
93813 ACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGTATTGGCAAG
386 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
* *
93878 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACGGCTTGCGCATCTCGT
451 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * * * *
93943 CTCTCT-GCAGTCGTAGT----GCCTGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGAAGTT
516 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* ** * * * *
94003 CATTACCAGTCTAAGATCAGACCAGATTGAGGGTTGCGACAGCAGAATTGGCAGCACACAGAGGG
581 CATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGG
* ** * * ** * * * *
94068 GGACTCGGTCGATCCCCGGCTCGTGCATCCCGCCCCAATGGCCGGTTGAACGCTCGCACCCTCGT
646 GGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGT
* * * *
94133 TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTACGCATATGGAGTTTATTCCCAAT
711 TTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGT
* * * *
94198 CTAAGATCGGACCGGACTGACGGTTGCGGCTGCACATGCTGGGCTCGGGCATGTGCTGGTGCCAC
776 CTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGC
* * *
94263 ATTTTTCTTCATCGGGGCATCATCGCCGGAGCATCGCCAGAGAACCTGACCGAC
841 ATTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
* * * *
94317 GGCATTGGGGTTCCGACGATCGGGGGGGCTGGGGGGCGTGTGCACATGATGTGCGATGGGTGCTA
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* * *
94382 GTACTTGGGCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAATAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * * *
94447 AGCATTTGAGATTTTACAGGTTTGCTACTAGTAGCCATTAAAGTGTCTAAAATGGGGACAGTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
94512 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
* ** * **
94577 AAAAAACAAGGATCACGTCTACCAAGTTTGGGGCTGAAACTCGTTTTGAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * * *
94642 CCTGAACCACAAAAAGTTTCTAAAATCGTGAAAAATAGAAAACGAGTCCTCTTGCCATGAAACTT
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * *
94707 CACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGTATTGGCAAGCAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
* *
94772 AATATGAAGATGCGCCTAAACCCACCTACCACCCAATCGATCCACGGCTTGCGCATCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * *
94837 CTAGCCGTCGTAGTGCCTGCCCGCCCGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGG
520 CTGGCCGGCGTA--G--T----GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * * * **
94902 AGTTCATTCCCAGTCTAAGATCA-ATCCAAATCAAGGGTTGCGGCAGCAGAATCACCAGCACGCA
577 AGTTCATTCCCAGTCTAAGATCAGA-CCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCA
* * * * * *
94966 GAGGGGCACCCGACCGATCCCCGGCTCGTGCATCCCGCCCCTCTGGCCGGTTGAGCGCTCGTACG
641 GAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* *
95031 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTACGCATATGGAGTTCATTC
706 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* * *
95096 CCAATCTAAGATCGGACCGGACTGAGGGTTGCGACAGCACATGCTGGGCTCGGGCATGTGCTGGT
771 CCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * *
95161 GCCGCATTTTTCTTCATCGGGGCATCATCGTCGGAGCATCGCCAGAGAACCTGACCGAC
836 GCCGCATTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
95220 GGCA-------T-------T-GGGGGGG-C-----GTGT--GCACATGATGTGCGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* * * *
95262 GTACTTGGGCCTTATCTTGGCCCCCTATCCCTCATCAAACCTCAATAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* *
95327 AGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
95392 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGGAA-TTTTTTGTGGCATG-CAA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT-GAATTTTTTTGT-GCATGCCAA
* **
95455 CAAAAATACAAGGATCACGTGTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAATTTTAAAAA
259 CAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * *
95520 ATCCCGAACCACAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCGATGAAAC
323 ATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* **
95585 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCTTTGGCACATA
388 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCA
*
95650 GAAATATGAAGATGTGCATAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
453 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
* * *
95715 CTATGGCCGGCGTAGTGCCCGCCGCCTGCCTACCCACTCGTTTCGTCGTTTGGCTTAGGCATACG
518 CTCTGGCCGGCGTAGTGCCCG-C-CC-G----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
*
95780 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTT----------G--CGGCAGCACGCA
576 GAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCA
* * * * * * *
95833 GAGGGGGACCC-AGTCTATCCCCGGCTTGCGCATCACGCCCCTCTAGTCGACTGAGTGCCCGCAC
641 GAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* *
95897 GCTCGTTCCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCTA-TCTAAGCATATGGA-TGTCA
705 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC-AGTCTAAGCATACGGAGT-TCA
* * ** * * * *
95960 TTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGATAGGACATGGTGGGTTCGGGCATGTGCC
768 TTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCT
** * * * * *
96025 GGTGGTGCATTTTTTTTCGCAGGGGCACCATCGTCGGAGCATCGCCAGAGAACCTGACCGGC
833 GGTGCCGCATTTTTCTTCACCGGGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACCGAC
* * * *
96087 GGCATTAGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCCCACAAGATGTACGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* *
96152 GTACTTGGCCCTTATATTGGTCCCCTATCCCTCACCAAACCTCGAGAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * *
96217 AGCATTTGAGATTTTACAGGTCTGCTGCCAGTAGCCATTAAAGTGTTTGAAATGGGGATACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* ** * * *
96282 TTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCAAAATTTTTTTGCGCAAGCCAATA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
96347 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTT-CGAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * ** * *
96411 CCTGAACTGCAAAAGGTTTTGAAAATTATGGAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
325 CCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* *
96476 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTAGCATGCAGA
390 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
* * *
96541 AATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCACGACTTGGGCATCCCGTCTCT
455 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* ** * * * * *
96606 CTAGCTAGCGTAGTGCCCGCCTGCCCGTTCGTTTCATTGGTTGGCTTAGGCATACAGAGTTCATT
520 CTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * ** * *
96671 CCCAGTGTAAGATCAGACCAGACTGAAGGTTGCAGCAATAGGATCGGCAGCATGTAGAGGGGGAC
585 CCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGAC
* * ** * *
96736 CCGACCGATCCCTGACTTGCGCATCCCGCCCCTCTGGCCAACTAAGCGCCCGCACGCTTGTTTCG
650 CCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
* *
96801 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGGCTAAGCATACGGAGTTCATTCCCAGCCTAA
715 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* ** * * *
96866 GATCGAACTAGATCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCTGTATTT
780 GATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
* *
96931 TTCTTCACCGGGGCACCATCGCGGGAGCATCGACGGAGAACCTGACCGGC
845 TTCTTCACCGGGGCACCATCGC-GGAGCATCGCCGGAGAACCTGACCGAC
* * *
96981 GGCATTGGGGTTCCGGCGATCGAGGGGGCCGGGGGGTGTGTGCACATGATGTGCGATGGGTGCTG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
97046 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * *
97111 AGCCTTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* *
97176 TTCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTGAATTGTTTTT-TGCATGCCAAT
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT-TTTTTGTGCATGCCAAC
*
97240 AAAAATACAAGGATCACGTCTACCAAGTTTGGTGCCAAAACTCCTTCCGAAAAAATTTTTAAAAA
260 AAAAATACAAGGATCACGTCTACCAAGTTTGG-GCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
** * *
97305 TCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATATAAAACGAGTCGTCTTGACATGAAACT
324 TCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * *
97370 TCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
* * *
97435 AAATATGAAGATGCGCCTAAACCCACCTACCGCCCTATCGATCCACGACTTGCGCATCCCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * * * *
97500 TCTGGCCGGCGTAGTGCCCGCACGCCCACCTGCCCGTTTGTTTCATCGGTTAGCTTAGGCATACA
519 TCTGGCCGGCGTAGTG--C-C-CG--C-CC-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * * * * * *
97565 AAGTTCATTCCCAGTCCAAGATC-GAACCGGACTGAGGGTTGCGGCAGCAGGATCGACAGCATGT
576 GAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGC
* * * * *
97629 AAAGGGGGACCTGGCCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGGCCGCAC
640 AGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* *
97694 GATCGTTTCGTGGGTTGAC-T-----TA---AG--------CA---T----AT--GGTGTTCATT
705 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
* ** * * *
97733 CCCAGCCTAAGATCGGATTGGACCGAGGGTTACTGCAGCACATGCTGGGCTCGAGCATGTGCTGG
770 CCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGG
* *
97798 TGCCGTATTTTTCTT---C---G-----T--CGGAGCATCGCCGGAGAACTTGACCGAC
835 TGCCGCATTTTTCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
* * * * * * *
97844 GGCATTGGGGTTCCGACAATCGGGGGGGCCAGGGGGTCTACGTACATGATGTGCGATGGTTGCAG
1 GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
* * *
97909 GTGCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAATCTCGAGATCTCACACCCCCTTAAAG
66 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * * *
97974 AGCATTTGAGATTTTACAAGTTCGCTGCCAGTAGCCATTAAAGTATCCGAAATGGGGACACTTTT
131 AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * *
98039 TTCAAAAGGTCACAAAATCTTATACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
196 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
*
98104 AAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
261 AAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * ** *
98169 -CTCGAACCGCAAAAAGTTTGAAAATTTGTGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACT
325 CCT-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* *
98233 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCAAGCAG
389 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAG
* * * * * * *
98298 AAATATGAAGATGTGCCTAAACCCACCAATCACCCTACCAATCCACCGCTTGTGCATCTCGTCTC
454 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
98363 TCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
519 TCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * *
98428 TCCCAGTCTAAGATCAGATCGGACCGAGGGTTACGGCAGCA
584 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCA
98469 CACAGAGGGT
Statistics
Matches: 13833, Mismatches: 1487, Indels: 706
0.86 0.09 0.04
Matches are distributed among these distances:
855 71 0.01
856 490 0.04
857 33 0.00
859 4 0.00
860 209 0.02
861 4 0.00
862 7 0.00
863 504 0.04
864 4 0.00
866 3 0.00
867 288 0.02
868 3 0.00
869 124 0.01
870 501 0.04
871 185 0.01
872 309 0.02
873 596 0.04
874 117 0.01
875 66 0.00
876 35 0.00
877 148 0.01
878 100 0.01
879 69 0.00
880 460 0.03
881 22 0.00
882 993 0.07
883 260 0.02
884 12 0.00
885 803 0.06
886 706 0.05
887 100 0.01
888 16 0.00
889 419 0.03
890 571 0.04
891 1063 0.08
892 9 0.00
893 327 0.02
894 1208 0.09
895 428 0.03
896 160 0.01
897 6 0.00
898 253 0.02
899 348 0.03
900 258 0.02
901 34 0.00
902 132 0.01
903 945 0.07
904 385 0.03
905 28 0.00
906 1 0.00
907 10 0.00
908 6 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (893 bp):
GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTG
GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
AGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACA
AAAATACAAGGATCACGTCTACCAAGTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
CTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAA
ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
TGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
CCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACC
CGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGT
GGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG
ATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTT
TCTTCACCGGGGCACCATCGCGGAGCATCGCCGGAGAACCTGACCGAC
Found at i:86213 original size:26 final size:26
Alignment explanation
Indices: 86184--86236 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
86174 GTTGACTTAG
86184 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
86210 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
86236 G
1 G
86237 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:87096 original size:26 final size:26
Alignment explanation
Indices: 87066--87118 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
87056 GTTGACATAG
*
87066 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
87092 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
87118 G
1 G
87119 ATCGTACAGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:87982 original size:26 final size:26
Alignment explanation
Indices: 87952--88003 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
87942 TTGACTTAGT
87952 CATACGGAGTTCATTCCCAATCTAAG
1 CATACGGAGTTCATTCCCAATCTAAG
*
87978 CATACGGGGTTCATTCCCAATCTAAG
1 CATACGGAGTTCATTCCCAATCTAAG
88004 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACGGAGTTCATTCCCAATCTAAG
Found at i:90637 original size:26 final size:26
Alignment explanation
Indices: 90601--90653 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
90591 GATGACTTAG
90601 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
90627 GCATACGGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
90653 G
1 G
90654 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:93294 original size:26 final size:26
Alignment explanation
Indices: 93265--93317 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
93255 GTTGATTTAG
93265 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
93291 GCATGCGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
93317 G
1 G
93318 ATCGGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:94186 original size:26 final size:26
Alignment explanation
Indices: 94150--94200 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
94140 GTTGACTTAG
*
94150 GCATACGGAGTTCATTCCCAGTCTAC
1 GCATACGGAGTTCATTCCCAATCTAC
* *
94176 GCATATGGAGTTTATTCCCAATCTA
1 GCATACGGAGTTCATTCCCAATCTA
94201 AGATCGGACC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.25, G:0.18, T:0.31
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAC
Found at i:95082 original size:26 final size:26
Alignment explanation
Indices: 95053--95103 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
95043 GTTGACTTAG
*
95053 GCATACGGAGTTCATTCCCAGTCTAC
1 GCATACGGAGTTCATTCCCAATCTAC
*
95079 GCATATGGAGTTCATTCCCAATCTA
1 GCATACGGAGTTCATTCCCAATCTA
95104 AGATCGGACC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.27, G:0.18, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAC
Found at i:95949 original size:26 final size:26
Alignment explanation
Indices: 95920--95972 Score: 65
Period size: 26 Copynumber: 2.0 Consensus size: 26
95910 GTTGACTTAG
95920 GCATACGGA-GTTCATTCCCTA-TCTAA
1 GCATACGGATG-TCATTCCC-AGTCTAA
*
95946 GCATATGGATGTCATTCCCAGTCTAA
1 GCATACGGATGTCATTCCCAGTCTAA
95972 G
1 G
95973 ATCGGACCAG
Statistics
Matches: 24, Mismatches: 1, Indels: 4
0.83 0.03 0.14
Matches are distributed among these distances:
25 1 0.04
26 22 0.92
27 1 0.04
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGATGTCATTCCCAGTCTAA
Found at i:96850 original size:26 final size:26
Alignment explanation
Indices: 96814--96866 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
96804 GTTGACTTAG
*
96814 GCATACGGAGTTCATTCCCAGGCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
96840 GCATACGGAGTTCATTCCCAGCCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
96866 G
1 G
96867 ATCGAACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.28, G:0.23, T:0.23
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGCCTAA
Found at i:99674 original size:26 final size:26
Alignment explanation
Indices: 99638--99690 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
99628 GTTGACTTAG
*
99638 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
99664 GCATATGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
99690 G
1 G
99691 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:101132 original size:711 final size:711
Alignment explanation
Indices: 99779--102596 Score: 3828
Period size: 714 Copynumber: 4.0 Consensus size: 711
99769 ACCATGGCGA
* ** * * * * *
99779 GAGCATCGCCGGAGAACCTGACCGACGGTATTGAGGTTTCGGCGATCGGGGGGCCGGGGGGGGTG
1 GAGCATCGTCGGAGAA-CTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGCC-CGGGGGGTG
* * *
99844 TACGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAA
64 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
99909 ACCTCTAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
129 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCAT
* * * *
99974 TAAAGTGTCTGAAATGGGGACATTTTTTTTAAATGGTCAAAAAATCTTGTACACTTCAAGTTTTT
194 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
** *
100039 AAATGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCT---AAGTTTGGGGCCAAA
259 AGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* ** * * *
100101 ACTTCTTTCGAAAAAATTTTAAAAAGCCCCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAG
324 ACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAG
* * *
100166 AAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGATCATTGTATGAATTTAGAA
389 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
*
100231 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
454 GCCATAAAAATGGCATTGGCAAGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * *
100296 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCC-GAAGTAGTGCCCGCTCGCCCGTCTGCCCGCT
519 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCA-TAGTGCCCGCCCG-CCG-CCGCCCGCT
* * * * * * *
100360 CGTTTTGTCGGTTGGCTTAGGAATATAGAGTTCATTCCTAGTATAAGATCGGACCGGACCGAGGA
581 CGTTTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGG-
* * * *
100425 TTGCCATAACAGGATCGGCAACACGTCGAGGGGGACCCGGCCGATCCTCGAGTCACGCACCATCA
645 TTGCCACAACAGGATCGGCAGCACGTCGAGGGGGACCCGGCCAATCCTC-AGTCGCGCACCATCA
100490 CCG
709 CCG
* * * * *
100493 GAGCATCGTCGGAGAATCTGACTGGTGACATTGGGGTTCTGGCGATC-GGGGGCCCGAGGGGTGT
1 GAGCATCGTCGGAGAA-CTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGTGT
* *
100557 GCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCCTAACCCTCATCAAA
65 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
100622 CCTCGAGAACTCACA-CCCCTTAAAGAGCGTTTGAGATTTTACAGGTTTGCAGCCAATAGCCATT
130 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATT
100686 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
195 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * * *
100751 GCTGAATGTTTTTGTGCATGGCAAAAAAAATTCAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
260 GCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* *
100816 CTCC-TTCTGAAAACATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAG
325 CTCCTTTC-GAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAG
* * *
100880 AAAACGAGTGGTCTTGCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA-TTAGAA
389 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
* * *
100944 GCCATAAAAATGGCATTGGAAAGTAGAAATATGAAGATGTGCCTAAACCCAACTACCACCCTATC
454 GCCATAAAAATGGCATTGGCAAGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * **
101009 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGTCGTCGCCTACTCGT
519 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCGCCGCCCGCTCGT
101074 TTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGTGTTG
584 TTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAG-GTTG
* * * ** * * * ***** * *
101139 CGGCAGC-ACATG-CCGGGCTCGAGCATGT-GCTGGTGTCGC-ATTTTTCTTC-GTCGGGGCACC
648 C--CA-CAACAGGATC-GG--C-AGCACGTCGAGGGGGACCCGGCCAATCCTCAGTC-GCGCACC
*
101199 ATCATCG
705 ATCACCG
*
101206 GAGCATCGTCGGAGAACTTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGTGT
1 GAGCATCGTCGGAGAAC-TGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGTGT
** * *
101271 GCGCACATGATGTGCGGCGGGTGGTGGTACTTGGCCCTTATATTGGCCACCTATCCCTCATCAAA
65 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
101336 CCTCAAGAACTCACACCCCCTTAAAGAACATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATT
130 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATT
*
101401 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGTGTTTTTA
195 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* *
101466 GCTGAATTTTTTTACGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTAGGGCCAAAA
260 GCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * **
101531 CACCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGA
325 CTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
* * * ***
101596 AAACGAGTTGTCTTGCGATGAAACTTCACGTTAAGGCTTAAAATACCATTGTATGAATTTACAAG
390 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
101661 CCATAAAAATGGCATTGGCACGCAGAAATAGGAAGATGTGCCTAAACCCACCTACCACCATATCG
455 CCATAAAAATGGCATTGGCAAGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * *
101726 ATCCACGGCTTGCGCATCCCATCGCTCTGGCCGACGTAGTGCCCGCCCG-C-CCGCCCGCTCGTT
520 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCGCCGCCCGCTCGTT
* *
101789 TTGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGA-CAGG-CCGAGGGTTG
585 TCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATC-GGACCGA-GGTTG
** * ** * * * *
101852 TGACAGCAGGATCGATAGCACGTCGAGGGGGACCCGGCCAATCC-CAAACTTGTGCACCATCACT
648 CCACAACAGGATCGGCAGCACGTCGAGGGGGACCCGGCCAATCCTC--AGTCGCGCACCATCACC
101916 G
711 G
* ** * **
101917 AAGCATCACCGGAGAACCTCACCGACGGCATT-GGGTTCCGACGATC-GGGGGCCCGGGGGGTGT
1 GAGCATCGTCGGAGAA-CTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGTGT
* * *
101980 GCGTACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCCAA
65 GCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
102045 CCTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
130 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATT
* * *
102110 AAAGTCTATGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTA
195 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
102175 GCTGAATTTTTTTATGCTTGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
260 GCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * * **
102240 ATCCTTTCG-AAAAATTTTAAAAAATCTCGAACAGCAAAAAGTTTCAAAAATCGTGAAACGTAGA
325 CTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
* *
102304 AAATGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
390 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
102369 CCATAAAAATGGCATTGGC-AGACAGAAATATGAAGATGTGACC-AAACCCACCTACCACCCTAT
455 CCATAAAAATGGCATTGGCAAG-CAGAAATATGAAGATGTG-CCTAAACCCACCTACCACCCTAT
102432 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCGCCCGCCCGCTC
518 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCG-CCGCCCGCTC
* * * *
102497 GTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCGCAGTCTAAGATCAGATCAGACCGAGTGT
582 GTTTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAG-GT
* ** * *
102562 TACGGCAGCAGGATCGGCAGCACGTAGAGGGGGAC
646 TGCCACAACAGGATCGGCAGCACGTCGAGGGGGAC
102597 TAGATCGATC
Statistics
Matches: 1851, Mismatches: 216, Indels: 76
0.86 0.10 0.04
Matches are distributed among these distances:
707 1 0.00
708 213 0.12
709 274 0.15
710 17 0.01
711 312 0.17
712 129 0.07
713 191 0.10
714 315 0.17
715 282 0.15
716 117 0.06
ACGTcount: A:0.28, C:0.24, G:0.23, T:0.25
Consensus pattern (711 bp):
GAGCATCGTCGGAGAACTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGTGTG
CGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTA
AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
CTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
TCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAA
AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
CATAAAAATGGCATTGGCAAGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGCCGCCGCCCGCTCGTTT
CGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGATCGGACCGAGGTTGCCA
CAACAGGATCGGCAGCACGTCGAGGGGGACCCGGCCAATCCTCAGTCGCGCACCATCACCG
Found at i:102702 original size:26 final size:26
Alignment explanation
Indices: 102672--102727 Score: 112
Period size: 26 Copynumber: 2.2 Consensus size: 26
102662 TGGGTTGACT
102672 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
102698 TAAGCATACGGAGTTCATTCCCAGTC
1 TAAGCATACGGAGTTCATTCCCAGTC
102724 TAAG
1 TAAG
102728 ATCGGACCGG
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 30 1.00
ACGTcount: A:0.29, C:0.25, G:0.20, T:0.27
Consensus pattern (26 bp):
TAAGCATACGGAGTTCATTCCCAGTC
Found at i:104316 original size:26 final size:26
Alignment explanation
Indices: 104286--104337 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
104276 GTTGACTCAG
104286 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
** * *
104312 GCATATGGAGTTCATTTCCTGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
104338 CATTTGACCA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.27, C:0.23, G:0.17, T:0.33
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:105217 original size:25 final size:26
Alignment explanation
Indices: 105182--105233 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
105172 GTTGACTTAG
*
105182 GCATACGGAGTTCATTCC-AGTCTAA
1 GCATACAGAGTTCATTCCTAGTCTAA
105207 GCATACAGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCTAGTCTAA
105233 G
1 G
105234 ATCGGACTGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 17 0.68
26 8 0.32
ACGTcount: A:0.29, C:0.23, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCTAGTCTAA
Found at i:106991 original size:26 final size:26
Alignment explanation
Indices: 106962--107014 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
106952 GCTGACTTAG
*
106962 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCACTCCCAGTCTAA
*
106988 GCATACGGAGTTCACTCCCAGTCTAA
1 GCATACGAAGTTCACTCCCAGTCTAA
107014 G
1 G
107015 ATCGGACTAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.28, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACGAAGTTCACTCCCAGTCTAA
Found at i:107889 original size:26 final size:26
Alignment explanation
Indices: 107853--107905 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
107843 GTTGACTTAG
107853 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
107879 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
107905 G
1 G
107906 ATCGAACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:108334 original size:882 final size:884
Alignment explanation
Indices: 104212--108889 Score: 5738
Period size: 878 Copynumber: 5.2 Consensus size: 884
104202 TAGTGCCTGC
* * * * *
104212 CCGATCCCCCGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCACACGCTTGTTTCATGGG
1 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* * * * * * *
104277 TTGACTCAGGCATACAGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTTCCTGTCTAACATT
66 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * *
104342 TGACCAGACCAAGGGTTG-TGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTC
131 GGACCAGACCGAGGGTTGCT-GCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTC
* * *
104406 TTCACCAGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACTGACGGCATTGGGGTTCC-GAT
195 TTCACC-GGG-GCCA---T-----CATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCAG-C
*
104470 GATCGGGGGGCCCAGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
249 GATCGGGGGG-CCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* *
104535 TTGGCCCCCTATCCCTTATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGA-TTTA
313 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * * *
104599 AAGGTTTGCTGCCAGTAGCAACTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
378 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
104664 ATCTTTTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAAAAATACAAGGATCAC
443 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* ** ** * *
104729 ATCTACCAAGACTGGGGCCAAAACTCCTTTTGAGAAAATTTTAAAAAATCCCGAACCAC-AAAA-
508 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
*
104792 --TCAAAAATCATGAAAAA-A-AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
573 TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* * * *
104853 GGACCATTGTATGAATTTACAGGCCGTAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCC
638 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * * * *
104918 TAAACCCACCTACCGCCCTATCGATCCATGGCTTGCGCATCCCGTCTCTTTGGCCGGCGTAGCGT
703 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * * * * **
104983 TCGCCCGCCCGCCCGTCCGTTCGTTTTGTCGGTTGGGTTAGGCATACGTAGTTCATTCCCAGTCT
768 CCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCT
* * * *
105048 AAGATCAGA-CCGAATCGAGGGTTGCGATAGCAGGATCAGCAGCACACAGAGGGGGACCCGG
833 AAGATCAGATCAG-ACCGAGGGTTGCG-TAGCA-G--CATC-G----CAGAGGGGGACCCGA
* * * * * *
105109 CCGATCCCCAGCTTGTGCATCTC-CTCCTCTGGCCGACTGAGCGCCTGCACGCTCGTTTCGTGGG
1 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* *
105173 TTGACTTAGGCATACGGAGTTCATT-CCAGTCTAAGCATACAGAGTTCATTCCTAGTCTAAGATC
66 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
** * * *
105237 GGACTGGACCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCAT-TAGCTGGTGCTGCATTTTTC
131 GGACCAGACCGAGGGTTGCTGCAGCACATGCTGGGCTCAGGCATGT-GCTGGTGCCGCATTTTTC
** * *
105301 TTCACCGAGACACCATCGTCGGAGCATCGCCGGGGAACCTGACCGACGGCATTGGGGTTCCAGCG
195 TTCACCG-G-GGCCA---T-----CATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCAGCG
* *
105366 ATCGGGGGGGCC-GAGGGGGTGTACGCGCATGATGTGCGATGGGTGCTGGTACTTGG-CCTTATA
250 ATC-GGGGGGCCAG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
* * *
105429 TTGGCCCCTTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGACATTTTA
313 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
*
105494 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTATAAAATGGGGACACTTTTTTCAAATGGTCACAAA
378 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * *
105559 ATCTTGTACACATCAAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAACAAAAATACAAGGATCAC
443 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* * *
105624 GTCTACCAAGTTTGGGGCAAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAG
508 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
* * * * * * *
105689 TTTCGAAAATCATGAAAAAAAGAAAATGAGTCATCTTGCCATGAAACTTCGCGTGAAGGCCTAAG
573 TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
**
105754 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCC
638 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * * * *
105819 TAAAGCCACCTACCATCCTATCGGTCCACGGCTTGCGCATTCCGTCTCTCTGGCCTGCGTAGTGC
703 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * *
105884 CCACCCGCCCGCCCGCCTGCTCGTTTCGTCGGTTGTCTTAGGCATACAAAGTTCATTCCCAGTCT
768 CCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCT
* *
105949 AAGATCAGATCAGACCAAGGGTTGCGGTAGTAGGATCGATACCACGCAGAGGGGGACCC-A
833 AAGATCAGATCAGACCGAGGGTTGC-GTAGCA-G--C-AT----CGCAGAGGGGGACCCGA
* *
106009 GCCGATCCTCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
1 -CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
*
106074 GTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAG-AT-C-GA----A----C---C-----T
65 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * *
106120 -------GACTGAGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGTTGGTGCTGCATTTTTC
130 CGGACCAGACCGAGGGTTGCTGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTC
* * * ** * *
106178 TTCACCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTAACCGGCGGCATTAAGGTTTCGGCG
195 TTCACCGGGG--CCA---TC--ATCA-C--CGGAGAACCTGACCGACGGCATTGGGGTTCCAGCG
*
106243 ATCGGGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGCCCCTTATAT
250 ATC-GGGGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATAT
*
106308 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTTACACCCCCTTAAAGAGCATTTGAGATTTTAC
314 TGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
* * * * * *
106373 AGGTTTGCTGCAAGTAGCCATTAAAGTGTCTAAAATAGGGACACTTTTTTCGAGTGGCCACAATA
379 AGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAA
* * * *
106438 TCTTGTACACTTCGAGTTTTTTGCTAAATTTTTTTGTGCATGTCAACAAAAATACAAGGATCACA
444 TCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACG
* * * *
106503 TCTACAAAGTTTGGGGCCAAAACACCTTCCAAAAAAATTTTAAAAAATCCCGAACCCCAAAAAGT
509 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGT
* ** * *
106568 TTCAAAAATTGTGAAAAATAGAAAACGAGTCACCTTGCCACGAAACTTCACGTAAAGGCTTAAGG
574 TTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* *
106633 GACCATTGTATGAATTTACAAGCCATAGAAATGGCATTGTCATGCAGAAATATGAAGATGTGCCT
639 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
* * * * **
106698 AAACCAACCTACCACCCTATCGATCCACGGCTTACGCATCCCATCTCTCTGGTCGGTATAGTGCC
704 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCC
* * * * * * *
106763 CGCCCACCCACCAGCCCGCTCATTTCGTCGGTTGGCCTAGGCATACAAAGTTCGTTCCCAGTCCA
769 CGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCTA
* *
106828 AGATCAGATCAGACCGAGGGTTGCGATAGCAGGATTGGCAGCACGTAAAGTGGGACCCGA
834 AGATCAGATCAGACCGAGGGTTGCG-TAGCAGCA-T--C-GCA-G---AGGGGGACCCGA
* * * *
106888 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTAGCCAGCTGAGCTCCCGTACGCTCGTTTCGTGGG
1 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
* * *
106953 CTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGCATACGGAGTTCACTCCCAGTCTAAGATC
66 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * * *
107018 GGACTAGACCAAGGGTTG-TGGTAGCACATTCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTC
131 GGACCAGACCGAGGGTTGCT-GCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTC
* * * * ** *
107082 TTCATCGGGGCACCATCGCCGGAGCATCGCCATTGAACCTGACCGACAACATTGGGGTT-CTGAC
195 TTCACCGGGG--CCAT---C--ATCACCG-GA--GAACCTGACCGACGGCATTGGGGTTCCAG-C
* * *
107146 GATCGGAGGGGCC-GAGGGGTGTTCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTACA
249 GATCGG-GGGGCCAGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA
107210 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
313 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* *
107275 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAA
378 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAA
* *
107340 ATCTTGTACACTTCGAGTTTTCAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAT
443 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAC
* * * * *
107405 GTCTACAAAGTTTAGGGCCAAAACTCCTTTCAAAAAAATTTTAAAAAATCTCGAACCGCAAAAAG
508 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAG
** * *
107470 TTTTGAAAATCGTTAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAA
573 TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* *
107535 GGACCATTGTATGAATTTACAAGCCATAGAAATGGCATTGGCATACAGAAATATGAAGATGTGCC
638 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* *
107600 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTCC
703 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * * ***
107665 CCGCCCGCCCGCCGGCCCGCTCGTTTCGTCGGTTGGCTTACGCTTAGGGAGTTCATTCCCAGTCT
768 CCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCT
* ** * **
107730 AGGATTGGATCGGACCGAGGGTTGCG-A-CAGCAT-GCAGAGGTAGACCCGA
833 AAGATCAGATCAGACCGAGGGTTGCGTAGCAGCATCGCAGAGGGGGACCCGA
* * * *
107779 CCGATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCTGCACGCTCATTTCGTGGG
1 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
107844 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
66 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * *
107909 GAACCGGATCGAGGGTTGCTGCAGCACATGCTAGGCTCAGGCATGTGTTGGTGCCGCATTTTTCT
131 GGACCAGACCGAGGGTTGCTGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCT
* * *
107974 TCACCCGGG-CATCATCACCAGAGAACCTAACCGACGGCATTGGGGTTCCAGCGATCGGGGGGAC
196 TCACCGGGGCCATCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCAGCGATCGGGGGG-C
* *
108038 CGGGGGGGGTGTGCGCACATGATATGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
260 C-AGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
* * * *
108103 TCCCTAATCAAACCTCGAGAAGTCACACCCCCATAAAGAGCATTTGAGATTTTACAAGTTTGCTG
324 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * *
108168 CCAGTAGCCATTAAAGTGTCTAAAATGGGGATACTTTTTTCAAATGGTCACAAAATGTCGTACAC
389 CCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
*
108233 TTCGAGTTTTTAGCTGAATGTTTTTGTGCATGCC-ACAAAAAATACAAGGATCACGTCTACCAAG
454 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAC-AAAAATACAAGGATCACGTCTACCAAG
* * * *
108297 TTTGGGGCCAAAACGCCTTCCGAAAAAATTCTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAAT
518 TTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAAT
108362 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
583 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
*
108427 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAGCCACC
648 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACC
* * * *
108492 TACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCTGACATAGTGCCCGCCCGCCC
713 TACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCC
* * * * ** * * *
108557 ACCTGCCCGCTCATTTTGTCTATTGGCTTCGGCATACAAAGTTCATTCCCAGTCTAAGATTAGAC
778 GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCTAAGATCAGAT
*
108622 CAGACCGAGGGTTGCGACAGCATGATCGGCAGCAT-GCAGAGGCGGACCCGA
843 CAGACCGAGGGTT--G-C-G--T-A---GCAGCATCGCAGAGGGGGACCCGA
* * * * * *
108673 CCAATCCCCGGCTTGGGCATCCCACCTCTCTGGCCGGCTGAGTGCCCGCACGCTCATTTCGTGGG
1 CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
*
108738 TTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG-TC
66 TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
* * * * * **
108802 GGATCAGACCGAGGGTTGC-GACAGCACATGCTGGGATCGGGCATATGCTGGTACTACATTTTTC
131 GGACCAGACCGAGGGTTGCTG-CAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTC
* *
108866 TTCACCGGGG-CACCATCATCGGAG
195 TTCACCGGGGCCATCATCACCGGAG
108890 CATCACCAAA
Statistics
Matches: 3298, Mismatches: 387, Indels: 196
0.85 0.10 0.05
Matches are distributed among these distances:
872 1 0.00
873 1 0.00
874 6 0.00
875 3 0.00
876 1 0.00
877 148 0.04
878 600 0.18
879 7 0.00
880 32 0.01
881 6 0.00
882 540 0.16
883 4 0.00
884 2 0.00
885 3 0.00
886 1 0.00
888 3 0.00
889 2 0.00
890 1 0.00
891 188 0.06
892 3 0.00
893 72 0.02
894 204 0.06
895 357 0.11
896 71 0.02
897 21 0.01
899 17 0.01
900 7 0.00
901 275 0.08
902 69 0.02
903 552 0.17
904 99 0.03
905 1 0.00
906 1 0.00
ACGTcount: A:0.26, C:0.26, G:0.24, T:0.25
Consensus pattern (884 bp):
CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGG
TTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC
GGACCAGACCGAGGGTTGCTGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCT
TCACCGGGGCCATCATCACCGGAGAACCTGACCGACGGCATTGGGGTTCCAGCGATCGGGGGGCC
AGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCC
AGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT
GGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGT
GAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATG
AATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTAC
CACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCC
CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAAAGTTCATTCCCAGTCTAAGATCAGATCAG
ACCGAGGGTTGCGTAGCAGCATCGCAGAGGGGGACCCGA
Found at i:108783 original size:26 final size:26
Alignment explanation
Indices: 108747--108799 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
108737 GTTGACTTAG
108747 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
108773 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
108799 G
1 G
108800 TCGGATCAGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:109456 original size:58 final size:59
Alignment explanation
Indices: 109392--109626 Score: 280
Period size: 58 Copynumber: 4.0 Consensus size: 59
109382 TCTTGTGTAG
* *
109392 GGAAAATTGATATTTTCAACTTTTTTCAAAAAATATTTTTTTGGAAA-TTT-ATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCTC-AAAAATATTTTTTTGGAAACTTTGATTTTTAA
* * **
109450 GAAAAATTGATACTTTCAACTTTTCCTCAAAAATATTTTTTTTGAAACTTTGATTTCCAA
1 GGAAAATTGATACTTTCAACTTTT-CTCAAAAATATTTTTTTGGAAACTTTGATTTTTAA
* *** *
109510 GGAAAATTGATACTTTCAACATTTCCTCAAAAACCCTTTTTT-GAAAATTT-ATTTTTAA
1 GGAAAATTGATACTTTCAAC-TTTTCTCAAAAATATTTTTTTGGAAACTTTGATTTTTAA
* * *
109568 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATTTTTTTTTGGAAATTTTGATTTTTA
1 GGAAAATTGATACTTTCAACTTTTCTC-AAAAATATTTTTTTGGAAACTTTGATTTTTA
109627 TTTAAAGAAA
Statistics
Matches: 150, Mismatches: 20, Indels: 12
0.82 0.11 0.07
Matches are distributed among these distances:
57 5 0.03
58 77 0.51
59 19 0.13
60 46 0.31
61 3 0.02
ACGTcount: A:0.34, C:0.11, G:0.08, T:0.46
Consensus pattern (59 bp):
GGAAAATTGATACTTTCAACTTTTCTCAAAAATATTTTTTTGGAAACTTTGATTTTTAA
Found at i:109550 original size:118 final size:118
Alignment explanation
Indices: 109392--109623 Score: 335
Period size: 118 Copynumber: 2.0 Consensus size: 118
109382 TCTTGTGTAG
* ** * * *
109392 GGAAAATTGATATTTTCAACTTTTTTCAAAAAATATTTTTTTGGAAATTTATTTTTAAGAAAAAT
1 GGAAAATTGATACTTTCAACTTTCCTCAAAAAACACTTTTTTGAAAATTTATTTTTAAGAAAAAT
109457 TGATACTTTCAACTTTT-CCTCAAAAATATTTTTTTT-GAAACTTTGATTTCCAA
66 TGATACTTTCAACTTTTCCCT-AAAAAT-TTTTTTTTGGAAACTTTGATTTCCAA
* *
109510 GGAAAATTGATACTTTCAACATTTCCTC-AAAAACCCTTTTTTGAAAATTTATTTTTAAGGAAAA
1 GGAAAATTGATACTTTCAAC-TTTCCTCAAAAAACACTTTTTTGAAAATTTATTTTTAAGAAAAA
*
109574 TTGATACTTTCAACTTTTCCCTAAAAATTTTTTTTTGGAAATTTTGATTT
65 TTGATACTTTCAACTTTTCCCTAAAAATTTTTTTTTGGAAACTTTGATTT
109624 TTATTTAAAG
Statistics
Matches: 102, Mismatches: 9, Indels: 6
0.87 0.08 0.05
Matches are distributed among these distances:
117 8 0.08
118 86 0.84
119 8 0.08
ACGTcount: A:0.34, C:0.12, G:0.08, T:0.46
Consensus pattern (118 bp):
GGAAAATTGATACTTTCAACTTTCCTCAAAAAACACTTTTTTGAAAATTTATTTTTAAGAAAAAT
TGATACTTTCAACTTTTCCCTAAAAATTTTTTTTTGGAAACTTTGATTTCCAA
Found at i:109653 original size:14 final size:14
Alignment explanation
Indices: 109634--109691 Score: 57
Period size: 14 Copynumber: 4.2 Consensus size: 14
109624 TTATTTAAAG
*
109634 AAAATAGAATAATA
1 AAAATAGAAAAATA
109648 AAAATAGAAAAATA
1 AAAATAGAAAAATA
* * *
109662 AAGAAAAGTAAAACA
1 AA-AATAGAAAAATA
109677 AAAAT--AAAAATA
1 AAAATAGAAAAATA
109689 AAA
1 AAA
109692 TTAAGATAAA
Statistics
Matches: 36, Mismatches: 7, Indels: 4
0.77 0.15 0.09
Matches are distributed among these distances:
12 8 0.22
14 17 0.47
15 11 0.31
ACGTcount: A:0.78, C:0.02, G:0.07, T:0.14
Consensus pattern (14 bp):
AAAATAGAAAAATA
Found at i:109661 original size:17 final size:17
Alignment explanation
Indices: 109641--109691 Score: 52
Period size: 17 Copynumber: 2.9 Consensus size: 17
109631 AAGAAAATAG
109641 AATAATAAAAATAGAAA-
1 AATAATAAAAATA-AAAC
109658 AATAA-AGAAAAGTAAAAC
1 AATAATA-AAAA-TAAAAC
*
109676 AAAAATAAAAATAAAA
1 AATAATAAAAATAAAA
109692 TTAAGATAAA
Statistics
Matches: 29, Mismatches: 1, Indels: 8
0.76 0.03 0.21
Matches are distributed among these distances:
16 1 0.03
17 17 0.59
18 10 0.34
19 1 0.03
ACGTcount: A:0.78, C:0.02, G:0.06, T:0.14
Consensus pattern (17 bp):
AATAATAAAAATAAAAC
Found at i:109700 original size:17 final size:16
Alignment explanation
Indices: 109678--109718 Score: 55
Period size: 17 Copynumber: 2.5 Consensus size: 16
109668 AGTAAAACAA
*
109678 AAATAAAAATAAAATT
1 AAATAAAAAGAAAATT
*
109694 AAGATAAAAAGAATATT
1 AA-ATAAAAAGAAAATT
109711 AAATAAAA
1 AAATAAAA
109719 CTAATCTAAT
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
16 8 0.36
17 14 0.64
ACGTcount: A:0.73, C:0.00, G:0.05, T:0.22
Consensus pattern (16 bp):
AAATAAAAAGAAAATT
Found at i:109769 original size:27 final size:29
Alignment explanation
Indices: 109726--109783 Score: 68
Period size: 27 Copynumber: 2.1 Consensus size: 29
109716 AAACTAATCT
* *
109726 AATAAATTTAAAAAAAACAAA-T-AAAAA
1 AATAAATTGAAAAAAAAAAAATTCAAAAA
109753 AATAAA-TGAAAATAAAAAAAATTCAAAAA
1 AATAAATTGAAAA-AAAAAAAATTCAAAAA
109782 AA
1 AA
109784 AAAAACTAGA
Statistics
Matches: 26, Mismatches: 2, Indels: 4
0.81 0.06 0.12
Matches are distributed among these distances:
26 5 0.19
27 13 0.50
28 1 0.04
29 7 0.27
ACGTcount: A:0.78, C:0.03, G:0.02, T:0.17
Consensus pattern (29 bp):
AATAAATTGAAAAAAAAAAAATTCAAAAA
Found at i:111136 original size:20 final size:21
Alignment explanation
Indices: 111111--111159 Score: 73
Period size: 21 Copynumber: 2.4 Consensus size: 21
111101 TTGTCATTTT
*
111111 TTTTTTGTGTCTT-TTTTTGG
1 TTTTTTGTCTCTTGTTTTTGG
*
111131 TTTTTTGTCTTTTGTTTTTGG
1 TTTTTTGTCTCTTGTTTTTGG
111152 TTTTTTGT
1 TTTTTTGT
111160 TTTTTTTACC
Statistics
Matches: 26, Mismatches: 2, Indels: 1
0.90 0.07 0.03
Matches are distributed among these distances:
20 11 0.42
21 15 0.58
ACGTcount: A:0.00, C:0.04, G:0.18, T:0.78
Consensus pattern (21 bp):
TTTTTTGTCTCTTGTTTTTGG
Found at i:111158 original size:21 final size:20
Alignment explanation
Indices: 111111--111166 Score: 78
Period size: 20 Copynumber: 2.8 Consensus size: 20
111101 TTGTCATTTT
* *
111111 TTTTTTGTGTCTTTTTTTGG
1 TTTTTTGTCTTTTTTTTTGG
111131 TTTTTTGTCTTTTGTTTTTGG
1 TTTTTTGTCTTTT-TTTTTGG
111152 TTTTTTGT-TTTTTTT
1 TTTTTTGTCTTTTTTT
111167 ACCAAAGCTC
Statistics
Matches: 33, Mismatches: 2, Indels: 3
0.87 0.05 0.08
Matches are distributed among these distances:
19 3 0.09
20 15 0.45
21 15 0.45
ACGTcount: A:0.00, C:0.04, G:0.16, T:0.80
Consensus pattern (20 bp):
TTTTTTGTCTTTTTTTTTGG
Found at i:111164 original size:7 final size:7
Alignment explanation
Indices: 111107--111164 Score: 57
Period size: 7 Copynumber: 8.6 Consensus size: 7
111097 AACATTGTCA
111107 TTTT-TT
1 TTTTGTT
*
111113 TTTTGTG
1 TTTTGTT
*
111120 TCTT-TT
1 TTTTGTT
*
111126 TTTGGTT
1 TTTTGTT
*
111133 TTTTGTC
1 TTTTGTT
111140 TTTTGTT
1 TTTTGTT
*
111147 TTTGGTT
1 TTTTGTT
111154 TTTTGTT
1 TTTTGTT
111161 TTTT
1 TTTT
111165 TTACCAAAGC
Statistics
Matches: 40, Mismatches: 10, Indels: 3
0.75 0.19 0.06
Matches are distributed among these distances:
6 7 0.17
7 33 0.82
ACGTcount: A:0.00, C:0.03, G:0.16, T:0.81
Consensus pattern (7 bp):
TTTTGTT
Found at i:111392 original size:42 final size:41
Alignment explanation
Indices: 111173--111512 Score: 500
Period size: 42 Copynumber: 8.1 Consensus size: 41
111163 TTTTACCAAA
* *
111173 GCTCCTCTAAACAGAGGCTCAACGACTTTGAGAAACATAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTG-GAAA-ATAAATT
*
111216 GCTCCTCTAAACAGAGGCACCACGACTTTTGAAAATAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTGGAAAATAAATT
* * *
111257 GCTCCTTTAAATAGAGGCACCACGACTTTGAAAAATAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTGGAAAATAAATT
*
111298 GCTCCTCTAAACAGAGGCACCACGACTTTGAAAAATAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTGGAAAATAAATT
*
111339 GCTCCTCTAAACAGAGGCACCACGACTTTTGGAAAGTAAATT
1 GCTCCTCTAAACAGAGGCACCACGAC-TTTGGAAAATAAATT
*
111381 GCTCCTCTAAACAGAGGCACCACGACTTTTGGAAAGTAAATT
1 GCTCCTCTAAACAGAGGCACCACGAC-TTTGGAAAATAAATT
* *
111423 GCTCCTTTAAACAGAGGCACCACGACTTTGAGAAAGTAAATT
1 GCTCCTCTAAACAGAGGCACCACGACTTTG-GAAAATAAATT
** *
111465 GCTCCTCTAAACAGAGGCACCATAACTTTTGGAAAGTAAATT
1 GCTCCTCTAAACAGAGGCACCACGAC-TTTGGAAAATAAATT
111507 GCTCCT
1 GCTCCT
111513 TGACAATCAT
Statistics
Matches: 279, Mismatches: 15, Indels: 7
0.93 0.05 0.02
Matches are distributed among these distances:
41 113 0.41
42 135 0.48
43 31 0.11
ACGTcount: A:0.36, C:0.23, G:0.17, T:0.24
Consensus pattern (41 bp):
GCTCCTCTAAACAGAGGCACCACGACTTTGGAAAATAAATT
Found at i:112790 original size:17 final size:17
Alignment explanation
Indices: 112765--112807 Score: 59
Period size: 17 Copynumber: 2.5 Consensus size: 17
112755 AATCTCTTTT
*
112765 TTTCATTTTCTCATTTC
1 TTTCTTTTTCTCATTTC
**
112782 TTTCTTTTTCTTTTTTC
1 TTTCTTTTTCTCATTTC
112799 TTTCTTTTT
1 TTTCTTTTT
112808 TGTTCTTTTT
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
17 23 1.00
ACGTcount: A:0.05, C:0.19, G:0.00, T:0.77
Consensus pattern (17 bp):
TTTCTTTTTCTCATTTC
Found at i:112797 original size:24 final size:22
Alignment explanation
Indices: 112761--112839 Score: 81
Period size: 22 Copynumber: 3.5 Consensus size: 22
112751 TTTGAATCTC
* *
112761 TTTTTTTCATTTTCTCATTTCT
1 TTTTTTTCTTTTTTTCATTTCT
112783 TTCTTTTTC-TTTTTTC-TTTCT
1 TT-TTTTTCTTTTTTTCATTTCT
*
112804 TTTTTGTTCTTTTTTTCATCATCT
1 TTTTT-TTCTTTTTTTCAT-TTCT
*
112828 TTTTTGTCTTTT
1 TTTTTTTCTTTT
112840 CTTATTTTTC
Statistics
Matches: 49, Mismatches: 3, Indels: 9
0.80 0.05 0.15
Matches are distributed among these distances:
20 3 0.06
21 10 0.20
22 15 0.31
23 13 0.27
24 8 0.16
ACGTcount: A:0.05, C:0.16, G:0.03, T:0.76
Consensus pattern (22 bp):
TTTTTTTCTTTTTTTCATTTCT
Found at i:116786 original size:59 final size:59
Alignment explanation
Indices: 116723--117017 Score: 423
Period size: 58 Copynumber: 5.0 Consensus size: 59
116713 TCTTGTGTAG
116723 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTTATTTTTAA
* *
116782 GGAAAATTGATACTTTCAACTTTTCCCAAAAAATA-TTTTTTTGGAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTTATTTTTAA
* * * **
116840 GAAAAATTGATACTTTCAACTTTTCCTCAAAAATATTTTTTTTGAAACTTTGATTTCCAA
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTT-ATTTTTAA
* * ***
116900 CGAAAATTGATACTTTCAACTTTTCCTCAAAAA-CCCTTTTTTGAAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTTATTTTTAA
* *
116958 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGGAAATTTTGATTTTTA
1 GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTT-GAAAATTT-ATTTTTA
117018 TTTAAAGAAA
Statistics
Matches: 207, Mismatches: 24, Indels: 8
0.87 0.10 0.03
Matches are distributed among these distances:
58 90 0.43
59 66 0.32
60 44 0.21
61 7 0.03
ACGTcount: A:0.35, C:0.13, G:0.07, T:0.45
Consensus pattern (59 bp):
GGAAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTTATTTTTAA
Found at i:116948 original size:118 final size:117
Alignment explanation
Indices: 116725--117014 Score: 431
Period size: 118 Copynumber: 2.5 Consensus size: 117
116715 TTGTGTAGGG
** *
116725 AAAATTGATACTTTCAACTTTTCCCCAAAAATATTTTTTTTGAAAATTT-ATTTTTAAGGAAAAT
1 AAAATTGATACTTTCAACTTTT-CCCAAAAATATTTTTTTTGAAAATTTGATTTCCAACGAAAAT
* * *
116789 TGATACTTTCAACTTTTCCCAAAAAATATTTTTTTGGAAATTTATTTTTAAGA
65 TGATACTTTCAACTTTTCCCAAAAAACACTTTTTTGAAAATTTATTTTTAAGA
*
116842 AAAATTGATACTTTCAACTTTTCCTCAAAAATATTTTTTTTGAAACTTTGATTTCCAACGAAAAT
1 AAAATTGATACTTTCAACTTTTCC-CAAAAATATTTTTTTTGAAAATTTGATTTCCAACGAAAAT
* *
116907 TGATACTTTCAACTTTTCCTC-AAAAACCCTTTTTTGAAAATTTATTTTTAAGG
65 TGATACTTTCAACTTTTCC-CAAAAAACACTTTTTTGAAAATTTATTTTTAAGA
*
116960 AAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGGAAATTTTGATTT
1 AAAATTGATACTTTCAACTTTTCCC-AAAAATATTTTTTTT-GAAAATTTGATTT
117015 TTATTTAAAG
Statistics
Matches: 158, Mismatches: 10, Indels: 8
0.90 0.06 0.05
Matches are distributed among these distances:
116 2 0.01
117 46 0.29
118 97 0.61
119 13 0.08
ACGTcount: A:0.35, C:0.13, G:0.07, T:0.45
Consensus pattern (117 bp):
AAAATTGATACTTTCAACTTTTCCCAAAAATATTTTTTTTGAAAATTTGATTTCCAACGAAAATT
GATACTTTCAACTTTTCCCAAAAAACACTTTTTTGAAAATTTATTTTTAAGA
Found at i:117044 original size:14 final size:14
Alignment explanation
Indices: 117025--117082 Score: 57
Period size: 14 Copynumber: 4.2 Consensus size: 14
117015 TTATTTAAAG
*
117025 AAAATAGAATAATA
1 AAAATAGAAAAATA
117039 AAAATAGAAAAATA
1 AAAATAGAAAAATA
* * *
117053 AAGAAAAGTAAAACA
1 AA-AATAGAAAAATA
117068 AAAAT--AAAAATA
1 AAAATAGAAAAATA
117080 AAA
1 AAA
117083 TTAAGATAAA
Statistics
Matches: 36, Mismatches: 7, Indels: 4
0.77 0.15 0.09
Matches are distributed among these distances:
12 8 0.22
14 17 0.47
15 11 0.31
ACGTcount: A:0.78, C:0.02, G:0.07, T:0.14
Consensus pattern (14 bp):
AAAATAGAAAAATA
Found at i:117052 original size:17 final size:17
Alignment explanation
Indices: 117032--117082 Score: 52
Period size: 17 Copynumber: 2.9 Consensus size: 17
117022 AAGAAAATAG
117032 AATAATAAAAATAGAAA-
1 AATAATAAAAATA-AAAC
117049 AATAA-AGAAAAGTAAAAC
1 AATAATA-AAAA-TAAAAC
*
117067 AAAAATAAAAATAAAA
1 AATAATAAAAATAAAA
117083 TTAAGATAAA
Statistics
Matches: 29, Mismatches: 1, Indels: 8
0.76 0.03 0.21
Matches are distributed among these distances:
16 1 0.03
17 17 0.59
18 10 0.34
19 1 0.03
ACGTcount: A:0.78, C:0.02, G:0.06, T:0.14
Consensus pattern (17 bp):
AATAATAAAAATAAAAC
Found at i:117091 original size:17 final size:16
Alignment explanation
Indices: 117069--117108 Score: 53
Period size: 17 Copynumber: 2.4 Consensus size: 16
117059 AGTAAAACAA
*
117069 AAATAAAAATAAAATT
1 AAATAAAAAGAAAATT
*
117085 AAGATAAAAAGAATATT
1 AA-ATAAAAAGAAAATT
117102 AAATAAA
1 AAATAAA
117109 CCTAATCTAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
16 7 0.33
17 14 0.67
ACGTcount: A:0.72, C:0.00, G:0.05, T:0.23
Consensus pattern (16 bp):
AAATAAAAAGAAAATT
Found at i:117164 original size:15 final size:15
Alignment explanation
Indices: 117124--117178 Score: 53
Period size: 15 Copynumber: 3.7 Consensus size: 15
117114 TCTAATAAAT
117124 AAAAAAAAAA--CAA
1 AAAAAAAAAATTCAA
*
117137 AAAACAAATAAA-TGAA
1 AAAA-AAA-AAATTCAA
117153 AATAAAAAAAATTCAA
1 AA-AAAAAAAATTCAA
117169 AAAAAAAAAA
1 AAAAAAAAAA
117179 CCTGGAGCGG
Statistics
Matches: 35, Mismatches: 2, Indels: 8
0.78 0.04 0.18
Matches are distributed among these distances:
13 4 0.11
14 3 0.09
15 14 0.40
16 12 0.34
17 2 0.06
ACGTcount: A:0.84, C:0.05, G:0.02, T:0.09
Consensus pattern (15 bp):
AAAAAAAAAATTCAA
Found at i:118290 original size:27 final size:27
Alignment explanation
Indices: 118200--118298 Score: 70
Period size: 27 Copynumber: 3.9 Consensus size: 27
118190 ATATAGAACT
*
118200 ATAAA-AATAAAATACCTAT-A-AATA
1 ATAAATAATAAAATACATATAATAATA
* * *
118224 TTAACAAAATAAAA-AAATA-AAT-A-A
1 ATAA-ATAATAAAATACATATAATAATA
*
118248 ATAAGTAA-AAATATACATATAATAATA
1 ATAAATAATAAA-ATACATATAATAATA
*
118275 ATAAATAATAAAATACATAAAATA
1 ATAAATAATAAAATACATATAATA
118299 CAAAAGAAAA
Statistics
Matches: 56, Mismatches: 9, Indels: 17
0.68 0.11 0.21
Matches are distributed among these distances:
22 3 0.05
23 3 0.05
24 11 0.20
25 9 0.16
26 8 0.14
27 19 0.34
28 3 0.05
ACGTcount: A:0.69, C:0.05, G:0.01, T:0.25
Consensus pattern (27 bp):
ATAAATAATAAAATACATATAATAATA
Found at i:119169 original size:26 final size:26
Alignment explanation
Indices: 119140--119192 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
119130 GTTGACTTAG
* *
119140 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTACATTCCCAATCTAA
119166 GCATACGGAGTACATTCCCAATCTAA
1 GCATACGGAGTACATTCCCAATCTAA
119192 G
1 G
119193 ATTGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTACATTCCCAATCTAA
Found at i:120702 original size:902 final size:903
Alignment explanation
Indices: 118419--129323 Score: 14849
Period size: 903 Copynumber: 12.1 Consensus size: 903
118409 TACAGGTAGG
** *
118419 ATTGGGGTTCCGATGATCGGGGGGGCCGGGGGGTGTGCGCACATCATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
118484 CTTGGCCCTTATATT-GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
* * *
118548 ATTTGAGATTTTACAGGTTTGCTACCAGAAGCCATTAAAGTGTCTGAAATAGGGACAC-TTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* * * * *
118612 AAATTGTCACAAAACCTTGTACGCTTCGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
* * *
118677 ATACAAGGATCACGTCTACAAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCCT
261 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
** * * *
118742 GAACC-TCAAAAAGTTTTAAAAATCATGAAAAATTGAAAACGATTCCTCTTGCCATGAAACTTCA
326 GAACCGT-AAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* * * *
118806 CGTGAAGGCTTAAGGGACTATTGTATGAATTTACAAGCCATAAAAATGGCCTTGG-A-ACAAAAA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC-AGAA
*
118869 ATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCACGGCTTGCGCAT-CCGTCTCTC
454 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
** *
118933 TGGCCGGCGTAGT--------GAACGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGA
519 TGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* *** * * * *
118990 GTTCATTCCTAGTCTAAGATCACACCAGACCAAGGGTTGCAGCAGCAAGATCGGTAGCACACAGA
584 GTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA
* *** * * *
119055 GGGAGACCCGGTTGATCCCCGGCTTGTGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCATGCT
649 GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCT
* *
119120 CATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTACATTCCC
714 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCC
* * * *
119185 AATCTAAGATTGGACCAGACCGAGGGTTGCGACAGCACAAGCTGGGCTCGGGCATGTGCTGGTGC
779 AGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
* * * * *
119250 CGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGGTGGC
844 CGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
* * *
119310 ATTGGGGTTCTGACGATC-GGGGGGCC-GGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
*
119373 CTTGGCCCTTATATTGGCCCCCTATCGCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
119438 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* * *
119502 AAATGGTCACAAAATCTTGTACTCTTCGAGTTTTTAGCTGACTTTTTTTGTGCATGCCAACAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
** *
119567 ATACAAGGATCATTTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCC
261 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
* * * * *
119632 GAACCGTAAAAAGTTTCAAAAATCGTGAAAAACAAAAAACGAGTCGTCTTGCCATTAAACTTCAC
326 GAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
**
119697 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAAT
391 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
*
119762 ATGAAGATGTGCCTAAACCCACCTACCACCCAATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
456 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * * * * *
119827 GCCGGCATAGTGCCCGCCTGCCCACCCACCCGCTCGTTTTGTCGGTTGGCTTAGTCATACGGAGT
521 GCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
** ** * * * *
119892 TCATTCCCAGTCTAAGATCCCG-CCAGACTGAGGGTTGTGGCAGCAAGATCGGTAGCACACAGAG
586 TCATTCCCAGTCTAAGAT-TGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAG
*
119956 GGGGACCCGACCGATCCCCGG-TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCTCGCACGCTC
650 GGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTC
* ** * *
120020 ATTTTATGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCA
715 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
* ** *
120085 GTCTAAGATCGGATCAGACTAAGGGTTGCAGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
780 GTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* * * * *
120150 GTATTTTTCTTTACCGAGGCACCATCGACGGAGCATCACCGGAGAACCTGACCGGCAGG-
845 GTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGC-GGC
** *
120209 ATTGGGGTTTTGGCGATCGGGGGGGCCGGGGGATGTGCGCACATGATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
*
120274 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAGGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
* *
120339 ATTTGAGATTTTACAGGTTTACTGCCAGTAGCCATTAAAGTGTCTGGAATGGGGACACTTTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* * * * *
120404 AAATGGTCACAAAATCTTGTACGCTTCGAGTTTTTAGCTAAATTGTTTTGTGCATGTCAACAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
* * *
120469 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTAAAAAAATCAC
261 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
* * * * * * * * *
120534 AAACCGCAGAACGTTTCGAAAATCGTAAAAAATAGAGAACGAGTCATCTTGCCCTGAAACTTCAC
326 GAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
* * * *
120599 GTGAAGGCTTAAGGCACCATTGTATGAAGTTACAAGCCATAAAAATGGCATTGGAATGTAGAAAT
391 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
* *
120664 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCTACGGCTTGTGCATCCCGTCTCTCTG
456 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * *
120729 GCCGACGTAGTGCTCGCCCGCCCGTCCGCCCGTCTGCCCGCTCATTTCGTCGGTTGGCTTAGGCA
521 GCCGGCGTA--G-T-GCCCGCCCGCCCG-CC--C-GCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * **
120794 TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCGAG-AGCAAGATCGGTGGC
578 TACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCG-GCAGCAGGATCGGCAGC
** ** *
120858 ACGCAGAGGGGGACTTGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGTCGGCTGAGCGCCC
642 ACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* * * *
120923 GCACGCTCGTTTTGTGGGTTGACTTAGGCATACAGAGTTGATTCCCAGTTTAAGCATACGGAGTT
707 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * *
120988 CATTCCCAGTCTAAGATCAGA-CTGTACCGAGGGTTGTGGCAGGACATGCTGGTCTCGGGCATGT
772 CATTCCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGT
** *
121052 GCTGGTGCCGTATTTTTCTTCA-CTGGGGCACCATCGTCGGAGCATCGCCAAAGAACCTGATCGG
836 GCTGGTGCCGTATTTTTCTTCATC-GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGG
*
121116 AGGC
900 CGGC
* *
121120 ATTGGGGTTCCGGCGATC-GGGGGGCCGGAGGGGTGTGCGCACATGATGTGCGATGGGTGTTAGT
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* * *
121184 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACCCACAACCCCTCAAAGAG
65 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
*
121249 CATTTGAGATTTTACAGGTTTGCTGTCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
130 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
* * *
121314 CAAATGGTCTCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT-TGTATGCCAAGAAA
195 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAA
* ** * *
121378 AATACAAGGATCTCGTCTACCAAGCCTGTGGCCAAAACTCCTTCCGAAAAAAATTTAAAAAATCC
260 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
* * * *
121443 CTAACCGTAAAAA-TTTTGAAAATCGTGAAAAACAGAAAACGAGTCGTCTTGCCATGAAACTTCA
325 CGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* * * * *
121507 CGTGAGGGGTTAAGGGACCATTTTATGAATTTACAAGGCATAAAAATGGCATTGGCATGTAGAAA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* *
121572 TATGAAGATGTCCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGTATCCCGTCTCTCT
455 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * * *
121637 GGTCGACGTAGTACCCGCCCGCCCGCCCGCCCACCCGCCCACTCATTTCATCGGTTGGCTTAGGC
520 GGCCGGCGTAGT----GCCCGCCCGCCCG----CCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGC
* * * * *
121702 ATATGGAATTCATTCCCAGTCTAAGATTGGACTAGACCAAGGGTTGTGGCAGCAGGATTGGCAGC
577 ATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGC
* *
121767 ACGCAGAGGGGGACCCGACCGATCCCCGGCTTGTGCATCCTGCCCCTCTGGCCGGCTGAGCGCCC
642 ACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* * *
121832 GCACACTCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTT
707 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * *
121897 CATTCCCAGTCTAAGATCGGA-TAGGACTGAGGGTTGCGGCAGCACATGCTGGGCTCGGACATGT
772 CATTCCCAGTCTAAGATCGGACCA-GACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGT
** * * * *
121961 GCTGGTGCCGTATTTTTCTTCGCCAGGGCACCATCGTCTGAGCATCGTCGGAGAACCTGACCGGT
836 GCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGC
122026 GGC
901 GGC
* *
122029 ATTGGGGTTCCGACGATC-GGGGGGCCGGGGGGAGTGCGCACATGATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
* *
122093 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCTTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
* * * *
122158 ATTTCAGATTTTACAGGTTTGCTACCCGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
*
122223 AAATGGTCACAAAATCTTGTACACTTCGAGTTTGTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
** * * * *
122288 ATACAAGCG-TCACACCTACCAAGTTTGGGGCCAAAAATCCTTCTGAAAAATTTTTTAAAAATCC
261 ATACAAG-GATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
* * * *
122352 CGAACCATAAAAAGTTTCGAAAATCATGAAAAATAAAAAACGTGTCGTCCTGCCATGAAACTTCA
325 CGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* * ** *
122417 CGTGAAGGATTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCACACAAAAA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
122482 TATGAAGATGTGCCTAAACCCACC-A--A--C---CGATCCACGGCTTGCGCATCCCGTCTCTCT
455 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * * * *
122539 GGCCGGCGTAGTGCCCACCCGCTCGCCCACACGCTCGTTTCATCAGTTGGCTTAGGCATACGGAG
520 GGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
** ** * * *
122604 TTCATTCCCAGTCTAAGATCAGACC-GAACTGAGGGTTGTGGTAGCAGGATCGACAGCACGCAGA
585 TTCATTCCCAGTCTAAGATTGGACCAG-ACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA
** * * *
122668 GGGGGACCCGGTCGATCCCTGGCTTGCACATCCCGCCCTTCTGGCCGGCTGAGCGCCCGCACGCT
649 GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCT
* * * *
122733 CGTTTCGTGGGTTGACCTAGGCATACGGAGTTTGA-TCCTAGTCTAAACATACGGAGTTCATTCC
714 CGTTTCGTGGGTTGACTTAGGCATACGGAG-TTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * * * *
122797 CAGTCTAAGATCGGATCGGACCGATGGTTGCGGTAGCACATGCTAGGCTCGGGCATGTGCTGGTG
778 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * * ** * *
122862 TCGTATTTTTCTTCGTCGGGGCTCTATCACCGGAGCATCACCGGAGAACCTGACCGGTGGC
843 CCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
* * * *
122923 ATTGGGATTTC-GTGATC-GGGGGGCCGAAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
1 ATTGGGGTTCCGGCGATCGGGGGGGCCG-GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* *
122986 ACTTGGCCCTTATAGTGGCCTCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
65 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
* * ** * *
123051 CATTTGAGAATTTACAGGTTTGCTGCCAGTAGCCAATAAAGTGTCCAAAATGAGGATACTTTTTT
130 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
*
123116 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTTCATGCCAAAAAA
195 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAA
* * * *
123181 AATACAAGAATCACGTCTACCGAGCTTGGGGCTAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
260 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
* * *
123246 CAAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC-TCA
325 CGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* ***
123310 CGTCAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* * *
123375 TATGAAGATGTGCCTAAACCTACCTACCACCCTATCGATCCACAGCTTGCGCATGCCGTCTCTCT
455 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * *
123440 AGCCGGCGTAGTGCCCGCCCGTCCGCACGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAG
520 GGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
* * * *
123505 TTCATTCCCAATCTAAGATTGGACCAAACCAAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAA
585 TTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG-A
* * *
123570 GGGGG-CCCGACCGATCCCCGGCTTGCACATCCCACCCCTCTGGCCGACTGAGCGCCCGCACGCT
649 GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCT
*
123634 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCC
714 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCC
* *
123699 AGTCTAAGATCGGACCAGACCGAGGGTTACGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
779 AGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
* * * * * * * *
123764 CGCATTTTTCTTCGTAGGGGCACCATCGCCAGAGCATCGCCGGAGAACCTGACAGACGAC
844 CGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
* * * *
123824 ATTGGGGTTCCGACGATC-GGAGGGCTCGGGGGGGTGTACACACATGATGTGCGATGGGTGCTGG
1 ATTGGGGTTCCGGCGATCGGGGGGGC-C-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGG
* *
123888 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGAGAACTCACACCCCCTTAAACA
64 TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * *
123953 ACATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTAAAGTGTCTTAAATGGGGACACTTTTT
129 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
124018 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAAAAA
194 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * *
124083 AAAAACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAGTCCTTCCGAAAAAATTTT-AAAAATC
259 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *
124147 CCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTC
324 CCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
*
124212 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCGA-ACAGA
389 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC-ATGCAGA
*
124276 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCT
453 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * ** * * * * *
124341 TTGGCTGGCGTAATGCCTGCCTGTTCGCCCGCGCGCTTGTTTCATCGATTGGCTTAGGCGTACGG
518 CTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGG
* * ** * * *
124406 AGTTCATTCCCAGTCTAAGATTGCATCAGACTGAGGGTTGCGGAAGCAGGATGGGCAGCACACAG
583 AGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* *** * * * * * * *
124471 AGGGGGGCCCGGTTGATCCCCGGCTTGTGCGTCCTGCCCCTATGGCCAGCTGAGCGCCCGTACAC
648 AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
* * * *
124536 TTGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCT
713 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* *
124601 CAGTCTAAGATCAGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
778 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
** * * * * *
124666 CCACATTTTTCTTCACCGGTGCACCATCGCCAGAGCATCGCCGGAGAACCTGACCGGCGAC
843 CCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
** * * *
124727 ATTAAGGTTCCAGCGATCGGGGGGGTCGGGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
* * * *
124792 GTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTTGAGAGCTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
* * *
124857 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTAAAATGGGGAAACTTTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* *
124922 AAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTTTGTGCATGACAAAAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
** * ** * *
124987 ATACAATAATCACGTCTACCAGGTTTGAAGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCT
261 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
** * *
125052 GAACCACAAAAAGTTTTGACAATCATGAAAAATAGAAAACGAGTCGTCTTGCC-TCGAAACTTCA
326 GAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCAT-GAAACTTCA
* *
125116 CGTGAAGGCTTAAGGGAACATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* *
125181 TATGAAGATGTCCCTAAACCCACCTGCCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
455 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * * * * *
125246 CGCTGGCGTAGT----GCCCGCCCACCCGCCCGCTCGTTTCGTCTGTTTGCTCAGGCATACGAAG
520 GGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
* * * * * * *
125307 TTCATTCCCCGTCAAAGATTGGACCAGACCAAGGGTTACGGCAGTAGAATCGGCAACACGCAAAG
585 TTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAG
* * *
125372 GGGGACCCGACCGATCCCCGGCTTGTGCATCCCACCCCTCTGGCCGGCTGAGCGCCCGCACACTC
650 GGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTC
* * * *
125437 GTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGAAGTTCATTCCTA
715 GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCA
* *** * * * * * *
125502 GTCTAAGAACGGATTGGATCAAAGGTTGCGGTAGCACATGCTGGGCCCGGGCATGTGCTGGTGCT
780 GTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCC
* *
125567 GTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCAGCGGC
845 GTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
* * *
125626 ATTGGGGTTCTGGCGATCGGGGGGGTCGAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
* * *
125691 CTTGGCCCTTATAGTCGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAACCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
*
125756 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* * * *
125821 AAATGGTCACAAAATCTTGAACACTTCGAGTTTTTAGCTGAATTTTTCTGTGCACGCCAACAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
* * *
125886 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTTC-AAGAAAA-TTTAAAAAATCT
261 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA-AAAATTTTAAAAAATCC
* *
125949 CGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTCCCATGAAACTTCA
325 CGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
*
126014 CGTG-AGGTCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGTCATTGGCATGCAGAA
390 CGTGAAGG-CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
* * * * *
126078 ATATGAAGATGTGCCTAAACCCACATACCAACCTATCGATTCACGGCTTGTGCATCCCGTCTTTC
454 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
** * *
126143 TGGTTGGC--ATTG--TGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
519 TGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * * * * *
126204 GTTTATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGTGGTAGCAGCATTGACAGCACGTAGA
584 GTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGA
* * * * **
126269 GGGTGTCCCGGCCGATCCCCAG-TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACTTT
649 GGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCT
126333 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACAGGA-TTCATTCC
714 CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAC-GGAGTTCATTCC
* * * * * * *
126397 CAGTCTATGATTGAACCAGACCGGACCAAGGGTTGCGACAGCACATGTTGGGCTCAGGCATCTGC
778 CAGTCTAAGATCGGACCAGACC-G----AGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGC
* * * *
126462 TGGTGCCATAATTTTCTTCATCGGGGCACCATCG-CTGAGGCATCGCCAGAGAACCTGACCGGCG
838 TGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGA-GCATCGCCGGAGAACCTGACCGGCG
*
126526 AC
902 GC
* * * *
126528 ATTGAGGTTTCGGCGATCGGGGGGGCCGGCGGGGTCTGCGCACATGATGTGCGATGGGTACTGG-
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* *
126592 AGCTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC-TAAAAA
65 A-CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* *
126656 GCATTTTAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTTTT
129 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * *
126721 TCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTAAATTGTTTTGTGCATGCCAAAAA
194 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* ** * *
126786 AAATACAAGGATCACGTCTACCAGGTTTGAAGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATG
259 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *
126851 TCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCGTGAAAATTC
324 CCGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
*
126916 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCAAGCAGAA
389 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAA
* *
126980 ATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCAACGGCTTGCGCATCCCGTCTCTC
454 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* * * ** *
127045 TGGCTGGCATAGT----GCCTGCCCGCCCGTTCGCTCGTTTCGTCGGTTGGCTTAGGCATACAGA
519 TGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
** *
127106 GTTCATTCCCAGTCTAAGATTGGACC-GAACTGAGGGTTGCGGCAGCAGGATCGGCAACACGCAG
584 GTTCATTCCCAGTCTAAGATTGGACCAG-ACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
** * *
127170 AGGGAAACCC-AGCCGATCCCCGGCTTGCGCGTCCCGCCCCTCTGGCCGACTGAGCGCCCGCACG
648 AGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
* * * *
127234 CTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAAGCATACGAAGTTAATTC
712 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* * * *
127299 CCAGTCTAAGATCGGACCTGACCGAGGGTTTCGACAGCACATGCTGGGGTCGGGCATGTGCTGGT
777 CCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* *
127364 GCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTGATCGGCGGC
842 GCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
* ** * * *
127426 ATTGGGGTTCTGATGATCGGGGGGCCCGGGGGGGTGTACGCACATGATGTGCGTTGGGTGCTGGT
1 ATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
* *
127491 ACTTAGCCCTTATATTGGCCCCCTATCCCTCATCGAACCTCGAGAACTCACACCCCCTTAAAGAG
65 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAG
* *
127556 CATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTT
130 CATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTT
*
127621 CAAATGGTCACAAAATCTTGTACA---C-------TA-C-GAGTTTTTTTGTGCATGCCAAAAAA
195 CAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAA
* * * * * *
127674 AATACAAGGGTCGCGTCTACCAAGTTTGGTGCCAAAACTCCTTCCAAAAAAATTTAAAAAAAACC
260 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCC
* * * * * * *
127739 AGAACTGCAAAAAGTTTCGAAAGTCGTGAAAAATAGAAAACGAGTCATCTTGCCATGTAACTTCA
325 CGAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
*
127804 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGGATGCCA-AA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG-CAGAA
* * *
127868 ATATGAAGATGTGCCTAAACCCACCTCCCACCCTATTGATCCATGGCTTGCGCATCCCGTCTCTC
454 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* * * *
127933 TGGCCGACGTAGTGCCCGCCCGCCCGCTCGCCTGCCCGCCTACTCGTTTCGCCAGTTGGCTTGGG
519 TGGCCGGCGTAGTGCCCGCCCGCCCG--C-CC-GCCCG----CTCGTTTCGTCGGTTGGCTTAGG
* * * * *
127998 CATATGGAGTACATTCCTAGTCTAAGATTGGACCAGACCAAGGGTTGTGGCAGCAGGATCGACAG
576 CATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAG
* * * *
128063 TACACAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCC
641 CACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
* * * * * *
128128 CGCACGCTCGTTACGTGGGTTGACTTAGGCATACGAAGTTTATTCCTAGTTTAAGCATACGAAGT
706 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGT
* * *
128193 TCATTCCCAGTCTAAGATCGGATCGGACCGAGGGTTGCGGTAGCACATGCTGGGCTCGGGCATGT
771 TCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGT
* *
128258 GCTGGTGCCGAATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGAC
836 GCTGGTGCCGTATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGC
128323 GGC
901 GGC
* * *
128326 ATTAGGGTTCAGACGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
1 ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
*
128390 CTTGGCCCTTATATTCGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
66 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
*
128455 ATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
131 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* *
128520 AAATGGTCACAAAATCTTGTACACTTCGGGTTTTTAGCTGAA-TTTTTTGTGCATGCCAACAAAA
196 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
* * * *
128584 ATACAAGGATCACGCCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAGAAATTTTAAAAAATCTC
261 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
* * *
128649 GAACCGTAAAATA-TTTCAAAAATCGTGAAAAATAGAAAACGAGTCGCCTTGCCATGAAACTTCA
326 GAACCGTAAAA-AGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
* * *
128713 CGTGAATGCTTAAGGGACCATTGTATGAATTTACAAGCCACAAAAATGGCATTGGCAAGCAGAAA
390 CGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAA
* ** *
128778 TATGAAGATGTGCCTAAGCCCACCTACCACGTTATCGATCCACGGCTTGCGCATACCGTCTCTCT
455 TATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * *
128843 GGCCGGCGTAGT--------GCCCGCCCGCCCACTAGTTTCGTCGGTTCGCTTAGGCATACAGAG
520 GGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAG
* * * *
128900 TTCATTCCCAGTCTAAGATTGGA-CAGGACTGAA-GGTTGCGACAACAGGATCGACAGCACGCAG
585 TTCATTCCCAGTCTAAGATTGGACCA-GAC-CAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAG
* * * *
128963 AGGGGGACCCGGCCGATCCCCGGCTTGTGCATCCCTCCCCTCTGGCCGGCTGAGTGCCCGCACGC
648 AGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
* * * * *
129028 TCGTTTCGTGGGTTGACTTAAGCATATGGAGTTCATTCCCAGTCCAAGCATACAGTGTTCATTCC
713 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
**
129093 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCAAGCATGTGCTGGTG
778 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* * * ** ** *
129158 CCGTATTTTTCTTCACCGAGGCATCATCG-CACCAGCATCAACGGAGAACCTGACCGGCGGT
843 CCGTATTTTTCTTCATCGGGGCACCATCGTC-GGAGCATCGCCGGAGAACCTGACCGGCGGC
* * * **
129219 ATTGGGGTTCGGGCAATCGGGGGGGCCGGGGGGGTCTGCGCACATGATGTGTAATGGGTGCTGGT
1 ATTGGGGTTCCGGCGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
*
129284 ACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCT
65 ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
129324 GCCCGCCCGC
Statistics
Matches: 8861, Mismatches: 1020, Indels: 262
0.87 0.10 0.03
Matches are distributed among these distances:
887 173 0.02
888 88 0.01
889 54 0.01
890 343 0.04
891 74 0.01
892 34 0.00
893 410 0.05
894 648 0.07
895 77 0.01
896 7 0.00
897 116 0.01
898 693 0.08
899 904 0.10
900 450 0.05
901 533 0.06
902 1179 0.13
903 1236 0.14
904 13 0.00
905 2 0.00
906 11 0.00
907 4 0.00
908 205 0.02
909 859 0.10
910 327 0.04
911 419 0.05
912 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (903 bp):
ATTGGGGTTCCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAA
ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC
GAACCGTAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
GCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGT
TCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGG
GGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCG
TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
TCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
TATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGC
Found at i:120986 original size:26 final size:26
Alignment explanation
Indices: 120950--121002 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
120940 GTTGACTTAG
* *
120950 GCATACAGAGTTGATTCCCAGTTTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
120976 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
121002 G
1 G
121003 ATCAGACTGT
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:121895 original size:26 final size:26
Alignment explanation
Indices: 121859--121911 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
121849 GTTGACTTAG
*
121859 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
121885 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
121911 G
1 G
121912 ATCGGATAGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:122801 original size:26 final size:26
Alignment explanation
Indices: 122754--122804 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
122744 TTGACCTAGG
* *
122754 CATACGGAGTTTGATCCTAGTCTAAA
1 CATACGGAGTTTCATCCCAGTCTAAA
122780 CATACGGAG-TTCATTCCCAGTCTAA
1 CATACGGAGTTTCA-TCCCAGTCTAA
122805 GATCGGATCG
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
25 3 0.14
26 19 0.86
ACGTcount: A:0.29, C:0.24, G:0.18, T:0.29
Consensus pattern (26 bp):
CATACGGAGTTTCATCCCAGTCTAAA
Done.