Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 19268551
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 68000 characters in sequence are not A, C, G, or T
File 42 of 120
Found at i:4744437 original size:26 final size:26
Alignment explanation
Indices: 4744408--4744460 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4744398 CTGATCCGAT
*
4744408 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCATATG
* *
4744434 CTTAGCCTGGGAATGAACTCCATATG
1 CTTAGACTGGAAATGAACTCCATATG
4744460 C
1 C
4744461 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCATATG
Found at i:4745354 original size:26 final size:26
Alignment explanation
Indices: 4745303--4745355 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
4745293 CCGGTCCATT
* *
4745303 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
4745329 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
4745355 C
1 C
4745356 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.17, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:4745595 original size:185 final size:183
Alignment explanation
Indices: 4745278--4745884 Score: 693
Period size: 185 Copynumber: 3.3 Consensus size: 183
4745268 AGTATGTGCG
* * * * * * *
4745278 GCCGTAACCCTCGGTCCGGTCCATTCTTAGACTAGGAATGAACTTCGTATGCTTAGATTGGGAAT
1 GCCGCAACCCTCAGTCCGATCCAATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAT
*
4745343 GAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCG
66 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCG
* *
4745408 GGATACGCAAGCCAGGGATCGTCTGGGTCCTCTTCCGCATGCTACCCATCCTGCT
131 GGATACGCAAGCCAGGGATCG-CCGGGTCCTCTTCCGC-TGCTACCAATCCTGCT
* *
4745463 ACCGCAACCCTCAGTCCGATCCAATCCTAGACTAGGAATGAACTCCGTGTGCTTAGACTGGGAAT
1 GCCGCAACCCTCAGTCCGATCCAATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAT
* * * * * *
4745528 GAACTCCGTACGCCTAAGTCAACCCATGAAACGAGCGTGTAGGTGCTTAGCTGGCCAGAGGGGCG
66 GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCG
* * * * * *
4745593 GGATACGCAAGCCGGGGATCAGCCGGGTCCCCCTCTGCGTGCTGCTAATCCTG-T
131 GGATACGCAAGCCAGGGATC-GCCGGGTCCTCTTCCGC-TGCTACCAATCCTGCT
* * * * *
4745647 CGCCGTAACCCTC-GATCTGGTCCGA-CCTTAGACTAGGAATGAACTCCTTATGCTTAGACTGGG
1 -GCCGCAACCCTCAG-TCCGATCCAATCC-TAGACTAGGAATGAACTCCGTATGCTTAGACTGGG
* * *
4745710 AATGAACTCCGTATGCCTTAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGG
63 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGG
* * * * * *
4745775 GCGGGATGCACAAG-CTGAGGATCGACCGGGTCCCTCTCTACG-TGCCACCGATCCTGCT
128 GCGGGATACGCAAGCCAG-GGATCG-CCGGGT-CCTCT-TCCGCTGCTACCAATCCTGCT
* * * * *
4745833 GCTGCAACCCTCAGTCTGATTCAATCTTAGACTAGGAATGAACTCTGTATGC
1 GCCGCAACCCTCAGTCCGATCCAATCCTAGACTAGGAATGAACTCCGTATGC
4745885 CTAAGCCAAC
Statistics
Matches: 351, Mismatches: 60, Indels: 22
0.81 0.14 0.05
Matches are distributed among these distances:
184 7 0.02
185 335 0.95
186 7 0.02
187 2 0.01
ACGTcount: A:0.23, C:0.29, G:0.27, T:0.21
Consensus pattern (183 bp):
GCCGCAACCCTCAGTCCGATCCAATCCTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAT
GAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCG
GGATACGCAAGCCAGGGATCGCCGGGTCCTCTTCCGCTGCTACCAATCCTGCT
Found at i:4745711 original size:26 final size:27
Alignment explanation
Indices: 4745672--4745730 Score: 93
Period size: 26 Copynumber: 2.2 Consensus size: 27
4745662 TCTGGTCCGA
*
4745672 CCTTAGACTAGGAATGAACTCCTTATG
1 CCTTAGACTAGGAATGAACTCCGTATG
*
4745699 -CTTAGACTGGGAATGAACTCCGTATG
1 CCTTAGACTAGGAATGAACTCCGTATG
4745725 CCTTAG
1 CCTTAG
4745731 TCAACCCACA
Statistics
Matches: 29, Mismatches: 2, Indels: 2
0.88 0.06 0.06
Matches are distributed among these distances:
26 24 0.83
27 5 0.17
ACGTcount: A:0.27, C:0.22, G:0.22, T:0.29
Consensus pattern (27 bp):
CCTTAGACTAGGAATGAACTCCGTATG
Found at i:4746583 original size:26 final size:26
Alignment explanation
Indices: 4746554--4746606 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4746544 CCGGTCTGAT
*
4746554 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
4746580 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
4746606 C
1 C
4746607 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:4747295 original size:15 final size:15
Alignment explanation
Indices: 4747275--4747308 Score: 68
Period size: 15 Copynumber: 2.3 Consensus size: 15
4747265 CCCCCAGTCC
4747275 CCCCGATCGTCGGAA
1 CCCCGATCGTCGGAA
4747290 CCCCGATCGTCGGAA
1 CCCCGATCGTCGGAA
4747305 CCCC
1 CCCC
4747309 AATGCCGCCG
Statistics
Matches: 19, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
15 19 1.00
ACGTcount: A:0.18, C:0.47, G:0.24, T:0.12
Consensus pattern (15 bp):
CCCCGATCGTCGGAA
Found at i:4747465 original size:26 final size:26
Alignment explanation
Indices: 4747429--4747481 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4747419 TTGATCTGAT
* *
4747429 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCATATG
4747455 CTTAGACTGGGAACGAACTCCATATG
1 CTTAGACTGGGAACGAACTCCATATG
4747481 C
1 C
4747482 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCATATG
Found at i:4748355 original size:26 final size:26
Alignment explanation
Indices: 4748326--4748378 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4748316 TCTGTCCAAT
4748326 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4748352 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4748378 C
1 C
4748379 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4749081 original size:902 final size:895
Alignment explanation
Indices: 4747182--4749200 Score: 2887
Period size: 897 Copynumber: 2.2 Consensus size: 895
4747172 TTAATGGTTA
*
4747182 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
1 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
*
4747247 CACATCATG-GTTGCACACCCCCCAGTCCCCCCGATCGTCGGAACCCCGATCGTCGGAACCCCAA
66 CACATCATGTG-TGCACA---CCC---CCCCCCG--C--C---CCCCCGATCGTCGGAACCCCAA
* * * * *
4747311 TGCCGCCGGTCAGGTTCTCCGGTGATACTTCGGCGATGGTGCCCTGACGAAGAAAAATGCGGCAC
117 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC-GACGAAGAAAAATGCAGCAC
* * * **
4747376 CGGCACATGCCCGAGCCCAGCATGTGCTGTCCCAAACCCCAGTTTGATCTGATCTTAGACTGGGA
181 CAGCACATGCCCGAGCCCAGCATGTGCTCTCCCAAACCACAGTTTGATCCAATCTTAGACTGGGA
*
4747441 ATGAACTCCGTATGCTTAGACTGGGAACGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCG
246 ATGAACTCCATATGCTTAGACTGGGAACGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
4747506 TGCGGGCGTTCAGCCGGCCAGAGGGGCGGGATGTACAAGCTGGGGATCGACCGGGTCCCCCTCTA
311 TGCGGGCGCTCAGCCGGCCAGAGGGGCGGAATG-ACAAGCCGGGAATCGACCAGGTACCCCTCCA
* * ** * *
4747571 TGTGCTTTTGATCCTACTGCCACAACCCTCAATCTGGTCTGATCTTAGACTGGGAATGAACTCCG
375 CGTGCTTTCGATCCTACTGCCACAACCCTCAATCTGGTCCAATCTTAGACTGGGAAGGAACTCCA
* *
4747636 TATGCCTAAGCCAACCGATGAAATGGGCAAGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGAT
440 TATGCCTAAGCCAACCGACGAAATGGGCAAGCGGGCGGGCACTACGTCGACCAGAGAGACGGGAT
* *
4747701 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCA
505 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCA
* *
4747766 ATGCCATTTTTATGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATAG
570 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTGTCATAG
* * ** * *
4747831 CAAGATGACTCGTTTTTTATTTTTCACGATTTTTAAAACTTTTTGTGGTTTGAGATTTTTTAAAA
635 CAAGACGACTCGTTTTTTATTTTTCACAATTTTTAAAACTTTTTACGGTTCGAGATTTTCTAAAA
* * * * * *
4747896 TTTTTTTCGAAGGAGTTTTGGTCCTAAACTTGTTAGACGTGATCCTTGTATATTTTTTGGCATGC
700 TTTTTTTCGAAAGAATTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTTTGGCATGC
4747961 ACAAAAAAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
765 ACAAAAAAATTCAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
4748026 CATTCTAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATTTCAAATGCTCTTTAAGGGGG
830 CATTCTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
4748091 T
895 T
* *
4748092 GTGGGTTCTCGAGGTTTGATGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
1 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
* *
4748157 CACATCATGTGTGCACACCCCCCCCCGCCCCCCCGATCGTTGGAACCTCAATGCCGCCGGTCAGG
66 CACATCATGTGTGCACACCCCCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * *
4748222 TTCTCCGGCGATGCTCCGACGATGGTGTCTCGACGAAGAAAAATGAAGCACCAGCACATGCTCGA
131 TTCTCCGGCGATGCTCCGACGATGGTG-CCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGA
* * *
4748287 GCCTAGCATGTGCTACT-GC-AACCTACGGTTCTG-TCCAATCTTAGACTGGGAATGAACTCCAT
195 GCCCAGCATGTGCT-CTCCCAAACC-ACAGTT-TGATCCAATCTTAGACTGGGAATGAACTCCAT
* * *
4748349 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGCGCTC
257 ATGCTTAGACTGGGAACGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* *
4748414 AGCTGGCCAGAGGGGCGGAATG-CGATAGCCGGGAATC-AGCCAGGTACCCCTCCGCGTG-TTGT
322 AGCCGGCCAGAGGGGCGGAATGAC-A-AGCCGGGAATCGA-CCAGGTACCCCTCCACGTGCTT-T
** *
4748476 CGATCCTGTTGCCACAACCCTCAGTGC-GGTCCAATCTTAGACTGGGAAGGAACTCCATATGCCT
383 CGATCCTACTGCCACAACCCTCAAT-CTGGTCCAATCTTAGACTGGGAAGGAACTCCATATGCCT
**
4748540 AAGCCAACCGACGAAACGAGTGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCG
447 AAGCCAACCGACG-AA--A-TGGGCAAGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCG
4748605 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATG
508 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATG
* *
4748670 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTGTCATGGCAA
573 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTGTCATAGCAA
* * * * *
4748735 GACGACTCGTTTTTTTTGTTTTTCCCAATTTTTGAAACTTTTTACGGTTCGGGGTTTTCTAAAA-
638 GACGACTCG--TTTTTTATTTTTCACAATTTTTAAAACTTTTTACGGTTCGAGATTTTCTAAAAT
* *
4748799 TTTTTTGGAAAGAATTTTAGCCCCAAATTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGC
701 TTTTTTCGAAAGAATTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTT-TTGGCATGC
4748863 ACAAAAAAATTCAGCTAAAAACTC-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
765 ACAAAAAAATTCAGCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
*
4748927 CCATT-TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAATTGCTCTTTAAGGG
829 CCATTCT-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
4748991 GGT
893 GGT
4748994 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
1 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
* *
4749059 CACATCATGTGTGCACA--CCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGC
66 CACATCATGTGTGCACACCCCCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * * *
4749122 TTCTCCGACGATGCTCCGACAATGGTGCCCCGACAAAGAAAAATTCAGCACCAGCACATGCCCGA
131 TTCTCCGGCGATGCTCCGACGATGGTG-CCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGA
4749187 GCCCAGCATGTGCT
195 GCCCAGCATGTGCT
4749201 GTCACAACAT
Statistics
Matches: 999, Mismatches: 91, Indels: 48
0.88 0.08 0.04
Matches are distributed among these distances:
895 1 0.00
896 8 0.01
897 301 0.30
898 8 0.01
900 114 0.11
901 182 0.18
902 254 0.25
903 43 0.04
904 7 0.01
907 3 0.00
910 77 0.08
911 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (895 bp):
GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCA
CACATCATGTGTGCACACCCCCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
TTCTCCGGCGATGCTCCGACGATGGTGCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAG
CCCAGCATGTGCTCTCCCAAACCACAGTTTGATCCAATCTTAGACTGGGAATGAACTCCATATGC
TTAGACTGGGAACGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
GGCCAGAGGGGCGGAATGACAAGCCGGGAATCGACCAGGTACCCCTCCACGTGCTTTCGATCCTA
CTGCCACAACCCTCAATCTGGTCCAATCTTAGACTGGGAAGGAACTCCATATGCCTAAGCCAACC
GACGAAATGGGCAAGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTGTCATAGCAAGACGACTCGTTTT
TTATTTTTCACAATTTTTAAAACTTTTTACGGTTCGAGATTTTCTAAAATTTTTTTCGAAAGAAT
TTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCTAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
Found at i:4749976 original size:26 final size:26
Alignment explanation
Indices: 4749925--4749977 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4749915 CTAGTCCAAT
**
4749925 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4749951 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
4749977 C
1 C
4749978 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4751511 original size:894 final size:895
Alignment explanation
Indices: 4749210--4751535 Score: 3369
Period size: 903 Copynumber: 2.6 Consensus size: 895
4749200 TGTCACAACA
* * * *
4749210 TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACAAAATGAGCGGGCGGGCG
1 TCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGATAAAACGAGCGGGCGGGCG
* * * * *
4749275 GGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGTATCGAT-AGGTGGTAGGTGGGTTT
66 GGCGCTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGTTT
* *
4749339 TGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
131 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGGTC
* **
4749404 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAA
* * * * * **
4749469 ACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCAGAA-AGAGTTTTGGCACCAAACCTATTAG
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGA-ATTTTTGGCCCCAAACTTGGTAG
* * ** * *
4749533 ACGTGATCCTTGAATTTTTGTTGGCATGGACAAAAAAATTCAGCTAAAAACTCAAATTGTACAAG
325 ACGTGACCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCAGAGTGTACAAG
* *
4749598 ATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGTCACTTTAATGGCTACTGGCAGCAAACC
390 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * * *
4749663 TGTAAAATTTCTAATCCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCC
455 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *
4749728 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAGACCCCCCGGCCCACCTGAT
520 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCACCAGAT
* *
4749793 CGCCGGAAACCCAATACCGTCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCTCAGCGAA
585 CGCCGGAAACCCAATACCGCCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCAGCGAA
* * * * * * *
4749858 GAAAAATGCGGCACCAGGACATGCCTGAGCCCAGTATGTGCTGCCGCAATCCTCGGTCTAGTCCA
650 GAAAAATGCAGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCACAACCCTCAGTCCAGTCCA
** *
4749923 ATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTTAAC
715 ATCTTAGACTGAAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTTAAC
* *
4749988 CCACAAAACGAGCGTGCGAGCGCTCAGTCGGCCAGAGGGGCGGGATGCGAAAGCAACGGATCGAC
780 CCACAAAACGAACGTGCGAGCGCTCAGTCGACCAGAGGGGCGGGATGCGAAAGCAACGGATCGAC
* * **
4750053 CAGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCTGTAACCCTTGGTCCGG
845 CAGGTCCCCCTCTCCGTGCTGCCGATCTTGCTGCTATAACCCTCAGTCCGG
* *
4750104 TCTGATCTTAGGCTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAACGAGCGAGCGGGCG
1 TCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGAT-AAA--A-CGA----GCG
* * *
4750169 GGCGGGCGGGCGCTACGCCGGCCAAAGAGACGGGATGCGGAAGACGTGGATTGATAGGGTGGTAG
58 GGCGGGCGGGCGCTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATTGATAAGGTGGTAG
4750234 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTATATTCATA
123 GTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTATATTCATA
* *
4750299 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGAAAGATGACTCATTTTCTATTTTTCATGA
188 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGA
* * * *
4750364 TTTTCAAACCTTTTTACGGTTTGAGATTTTTTAAAATTGTTTT-GGAAGAATTTTTGTCCCCAAA
253 TTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT-TTTTCGGAAGAATTTTTGGCCCCAAA
*
4750428 CTTGGTAGACGTGACCCTTGTATTTTTGTTGGTATCCACAAAAAAATTCAGCTAAAAACTCAGAG
317 CTTGGTAGACGTGACCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCAGAG
*
4750493 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGC
382 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
4750558 AGCAAATCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGCTTTGATGAGGGAT
447 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* *
4750623 AGGGGGCCAATATAAGGGCCAAGTACC-GCACCCATTGCAGATCATGTGCGCACACCCCCCCGGC
512 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGC
* * * ** * * *
4750687 CCCCCAGATCGTCGGAACCCCAATGTCGCCGGTCAGGTTTTCTGACGATGCTTC-GACGATGGTG
576 CCACCAGATCGCCGGAAACCCAATACCGCCGGTCAGGTTCTCCGACGATGCTCCAG-CGATGGTG
* * * *
4750751 CCCCCGCGAAGAAAAATGCAGCACCAGCACTTG-CTCGAGCCCAGCATGTGCTTCCACCACCCTC
640 CCCCAGCGAAGAAAAATGCAGCACCAGCACATGCCT-GAGCCCAGCATGTGCTGCCACAACCCTC
* * * * *
4750815 AGTCCGGTCCGATCTTAGGCTGAAAATGAACTCCGTTTGCTTAGACTGGGAATGAACTCCGTATG
704 AGTCCAGTCCAATCTTAGACTGAAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATG
* *
4750880 CCTAAGTTAACCCACAAAATGAACGTGCGGGCGCTCAG-CTGACCAGAGGGGCGGGATGC-ACAA
769 CCTAAGTTAACCCACAAAACGAACGTGCGAGCGCTCAGTC-GACCAGAGGGGCGGGATGCGA-AA
* * ** * * *
4750943 GCTGA-GGATCGATCAGGTCCCCCTCTCCGTGCTGTTGATCTTGCT-ATCATATCCCTCAGTTCG
832 GC-AACGGATCGACCAGGTCCCCCTCTCCGTGCTGCCGATCTTGCTGCT-ATAACCCTCAGTCCG
4751006 G
895 G
* * *
4751007 TCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGATTAAACGAGCGGTCAGGCG
1 TCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGATAAAACGAGCGGGCGGGCG
* * *
4751072 GACGCTACGCCGACCAAAGAGACGGGATGCGCAAGCCGTGGATTGATAAGGTGGTAAGTGGGTTT
66 GGCGCTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGTTT
** * *
4751137 AGGCACATCTTCATATTTCTATGTGCGAATGCCA-TTTTATGGCTCGTATATTCATACAATGGTC
131 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGGTC
* * *
4751201 CCTTAAGCCATCACGTGAAGTTTCATGGCAAGACGACTCGTTTTATATTTTTCATGATTTTCAAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAA
4751266 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGAATTTTTGGCCCCAAACTTGGTAGA
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGAATTTTTGGCCCCAAACTTGGTAGA
* *
4751331 CGTGACCCTTGTATTTTTGTTGGCATCCATAAAATAATTCAGCTAAAAACTCAGAGTGTACAAGA
326 CGTGACCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCAGAGTGTACAAGA
* *
4751396 TTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAACCT
391 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
4751461 GTAAAATCTCAAATGCACTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
456 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
4751526 ATATAAGGGC
521 ATATAAGGGC
4751536 ACAGCCGGCC
Statistics
Matches: 1280, Mismatches: 133, Indels: 38
0.88 0.09 0.03
Matches are distributed among these distances:
893 4 0.00
894 381 0.30
895 102 0.08
897 1 0.00
898 2 0.00
899 3 0.00
900 1 0.00
902 83 0.06
903 697 0.54
904 6 0.00
ACGTcount: A:0.26, C:0.23, G:0.24, T:0.27
Consensus pattern (895 bp):
TCCGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGATAAAACGAGCGGGCGGGCG
GGCGCTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATTGATAAGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAA
ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGAATTTTTGGCCCCAAACTTGGTAGA
CGTGACCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCAGCTAAAAACTCAGAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCACCAGATC
GCCGGAAACCCAATACCGCCGGTCAGGTTCTCCGACGATGCTCCAGCGATGGTGCCCCAGCGAAG
AAAAATGCAGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCACAACCCTCAGTCCAGTCCAA
TCTTAGACTGAAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTTAACC
CACAAAACGAACGTGCGAGCGCTCAGTCGACCAGAGGGGCGGGATGCGAAAGCAACGGATCGACC
AGGTCCCCCTCTCCGTGCTGCCGATCTTGCTGCTATAACCCTCAGTCCGG
Found at i:4752370 original size:26 final size:26
Alignment explanation
Indices: 4752332--4752383 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
4752322 CCGGTCCGAT
* *
4752332 CTTAGCCTAGGAATGCACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
* *
4752358 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCATATG
4752384 ACTAAGTCAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.27, C:0.23, G:0.23, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:4753261 original size:26 final size:26
Alignment explanation
Indices: 4753232--4753284 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4753222 CCGGTCCGAT
4753232 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4753258 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4753284 C
1 C
4753285 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4756047 original size:185 final size:185
Alignment explanation
Indices: 4755681--4756094 Score: 478
Period size: 185 Copynumber: 2.2 Consensus size: 185
4755671 CTGCTGCAAT
* * * *
4755681 CCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAATTTCG
1 CCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * * *
4755746 TATGCCTAAGTCAACCAATGAAACGAGCGTGCGGGACGCTCAACCGGCTAGAGGGGCGAAATGCG
66 TATGCCTAAGTCAACCAACGAAACGAGCATACGGGACGCTCAAACGGCTAAAGGGGCGAAATGCG
* * * *
4755811 CAAGCCAGGGATCGGTCGGGCCCCCGCTGCGCGCTGCAGATCGTACTACCGTTA-C
131 CAAGCCAGGGATCGCTCGGGCCCCCGCTACGCGCTACAGATCCTACTACCG-TAGC
* *
4755866 CCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCT
1 CCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * **
4755931 TATGCCTAAGTTAACCCACGAAACGAGCATACGGG-CGCTCAAACGAG-TAAAGGGGTGGGATGC
66 TATGCCTAAGTCAACCAACGAAACGAGCATACGGGACGCTCAAACG-GCTAAAGGGGCGAAATGC
* * * * * * *
4755994 GCAAGCCGGGGATCGACT-GGGTTCTCCTCTACGTGCTACCGATCCTGCTACCGTAGC
130 GCAAGCCAGGGATCG-CTCGGG-CCCCCGCTACGCGCTACAGATCCTACTACCGTAGC
* * *
4756051 CTTC-AGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGC
1 CCTCGA-TCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
4756095 CTAAGCCAAC
Statistics
Matches: 193, Mismatches: 31, Indels: 10
0.82 0.13 0.04
Matches are distributed among these distances:
184 41 0.21
185 152 0.79
ACGTcount: A:0.24, C:0.27, G:0.27, T:0.22
Consensus pattern (185 bp):
CCTCGATCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
TATGCCTAAGTCAACCAACGAAACGAGCATACGGGACGCTCAAACGGCTAAAGGGGCGAAATGCG
CAAGCCAGGGATCGCTCGGGCCCCCGCTACGCGCTACAGATCCTACTACCGTAGC
Found at i:4758610 original size:26 final size:26
Alignment explanation
Indices: 4758572--4758624 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4758562 CTGGTCTGAT
*
4758572 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
4758598 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4758624 C
1 C
4758625 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4759504 original size:26 final size:27
Alignment explanation
Indices: 4759471--4759522 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 27
4759461 TCGTCTGATC
4759471 TTAGACTGGAAATGAACT-CCGTATGA
1 TTAGACTGGAAATGAACTCCCGTATGA
*
4759497 TTAGACTGGGAATGAACTCCCGTATG
1 TTAGACTGGAAATGAACTCCCGTATG
4759523 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
26 17 0.71
27 7 0.29
ACGTcount: A:0.31, C:0.17, G:0.25, T:0.27
Consensus pattern (27 bp):
TTAGACTGGAAATGAACTCCCGTATGA
Found at i:4760398 original size:26 final size:26
Alignment explanation
Indices: 4760362--4760414 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4760352 CAGGTCCGAT
* *
4760362 CTTAGACTGGGAATTAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4760388 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4760414 C
1 C
4760415 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4761294 original size:26 final size:26
Alignment explanation
Indices: 4761261--4761311 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
4761251 TCGTCTGATC
4761261 TTAGACTGGAAATGAACTCCATATGA
1 TTAGACTGGAAATGAACTCCATATGA
* *
4761287 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTGGAAATGAACTCCATATG
4761312 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.33, C:0.16, G:0.24, T:0.27
Consensus pattern (26 bp):
TTAGACTGGAAATGAACTCCATATGA
Found at i:4761607 original size:898 final size:898
Alignment explanation
Indices: 4755864--4764879 Score: 11888
Period size: 900 Copynumber: 10.1 Consensus size: 898
4755854 TACTACCGTT
* *
4755864 ACCCTCGATCT-GATCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACT
1 ACCCTCGGTCTCG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * ** * * *
4755928 CCTTATGCCTAAGTTAACCCACGAAACGAGCATACGGGCGCTCAAACGAG-TAAAGGGGTGGGAT
65 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCG-GCCAGAGGGGCGGGAT
* * * * * * * * *
4755992 GCGCAAGCCGGGGATCGA-CTGGGTTCTCCTCTACGTGCTACCGATCCTGCTACCGTAGCCTTCA
129 GCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCG
* ** *
4756056 GTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGT
193 GTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-
* *
4756121 CGGGCGGGCGGGCGGGCGCTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGG
254 CGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* *
4756186 TGGTAGGTGGGTTTAGGCACATCTCCATATTTCTGCATGCCAATGCCATTTTTGTGGCTTGTAAA
319 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* * *
4756251 TTCATACAATAGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTT
384 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
** * * *
4756316 TCATGATTTTCAAAACTTTTTTCGGTTCGAGATTTTTTAAAATTTTTTTGGGAGGAGTTTTGGCC
449 TCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC
*
4756381 CCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACT
514 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
*
4756446 CGAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
579 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
*
4756511 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTCGAGGTTTGATGA
644 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
4756576 GGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACGCATCGCACATCATGTGCGCACATCGCC
709 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CC
* * * * * ** *
4756641 CCGGCCCCCCCGATCGCCAGAACCCCAATGCCGCCATTCAGGTTCTCCGACGATGCTCCGACGAT
772 CCCGACCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * * * *
4756706 GGTGCCCCGACGAAGAGAAATGCGGCACCAGCACATGCTCGAGCCTATCATGTGCTGCCGCA
837 GGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
4756768 ACCCTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTG
1 ACCCTCGGTCTCGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * * *
4756833 CTTATGCCTAAGTCAACCCACAAAATGAGCGTGCAGGCACTCAGCCGGCCATAGGGGCGGGATGC
66 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * *
4756898 GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGTTGCCGATCCTACTGCCGCAACCCTTGGTC
131 GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
* * *
4756963 CTGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAG
196 CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * * *
4757028 GCAGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGCGTGGCAGG
261 GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* ** *
4757093 TGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGTTTTGTAAATTCATAT
326 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * *
4757158 AATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCATGAT
391 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
** * * **
4757223 TTTCAAAACTTTTTACGGTTCGGGATTTGTTAAAATTTTTTCGGAAGGAGTTTTATCCCCAAACT
456 TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACT
** * * *
4757288 TGGTAGACAAGATCCTTGTATTTTTCTTGGCGTGCACAAAAAAATCCAGCTAAAAACTCGAAGTG
521 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
* * *
4757353 TACAAGATTTTGTGTCCATTTGAAAAAAGTGCCCCCATTTCAGACACTTTATTGGCTACTGGCAG
586 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * * * *
4757418 TAAACCTGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTTCTGGAGGTTAGATGACGGATAG
651 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * * * *
4757483 GGGGCCAATATAAGGGCCAAGAACCAGCACCCATTGCACATCATGTGTGCACACCCCCCCAGCTC
716 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGA-CCC
* * * *
4757548 CCCGATCTTCGAAACTCCAATGCCGCCGGTCAGGTTCT-C--C---G----G-CGATGGTGCCCC
780 CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
* * *
4757602 GGCAAAGAAAAATGCGGCACCAGCACATGCCCGAGCACAAG-ATGTGCTGCTGCA
845 GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGC-CCAGCATGTGCTGCCGCA
* * * * * *
4757656 ACCCTCGGACT-GATCTGATCTTAGACTGAGAATGAACTCCATATGCTTAGACTAGGAATGAATT
1 ACCCTCGGTCTCG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * * ** *
4757720 TCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAACCGGACAGAGTGGCGAAATA
65 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * ** * *** *
4757785 CGCAAGCCGGGGATCGGTCGGGTCCCCCGCTGCACGCTGCCGGTCCTGCTGCCATTACCCTTGGT
130 CGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT
* * * * * * * *
4757850 CTGATCCGATCGTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGTGGGCA
195 CCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG
* *
4757915 GGCAGGCGGGCACTACGTCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
260 GGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* *
4757980 GTGGGTTTGGGCACATCTTCATATATTCTGTATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
325 GTGGGTTTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * * * *
4758045 ACAATGGTTCCTTAAGCCTTCACATGAAGTTTCGTGGCAAGACGACTCGTTTTTTGTTTTTCACG
389 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * * * *
4758110 ATTTTTGAAACTTTTTGCAGTTCAGGATTTTTTAAAATTTTTTTGGTAGGAGTTTTGGCCCAAAA
454 ATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAA
* * * * *
4758175 CTTTGTAGACGAGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGGTAAAAACTCAAAG
519 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* * * *
4758240 TATACAAGATTTTGTGACAATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGTCTACTGGC
584 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
4758305 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAGTTCTCGAGGTTTGATGAGGGAT
649 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * * *
4758370 AGGGGGCCAATATAAGGGCCAAGTACGAGCA-CCATCCCACATCATGTCCGTACACCCCCC-ACC
714 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACC
* * * * * * *
4758433 CCTTCGATCGTCGGAACCGCAATACCGTCGGCCAGGTTCTCCGACGATGCTTCGGCGATGGTGCC
779 CC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
** ** *
4758498 CCAACGAAGAAAAATG-GGACACCAGCACATGCCCGAGCCCA-CATGTGCTATCACA
843 CCGGCGAAGAAAAATGCGG-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * * *
4758553 ACCCTCCGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTT
1 ACCCTCGGTCTCGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * *
4758618 CGTATGCCTAAGTCAACCCATGAAACAAACATGCGGGCGCTCAGCCGGCTAGAGGGGCGGGATGC
66 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * ** ** * * * * *
4758683 GCAAGCCGAGGATCGGTCGGGTCCCCCTCTGTGTGCTATCGATTTTGCTACCGTAACCGTCAGTT
131 GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
* ** ** * * *
4758748 TGGTCCAATCTTAGACTAAGAGTGAACTCCGTATGCCTAAGCCAATCGACGAAATGAGCGGGCGG
196 CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* * * *
4758813 GCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGA
261 GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
4758878 TGGGTTTTGGCACATCTTCATATTTTTGCATG-CAATTGCCATTTTTATGGCTTGTAAATTCATA
326 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA-TGCCATTTTTATGGCTTGTAAATTCATA
* *
4758942 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCACGA
390 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
** * *
4759007 TTTTTGAAACTTTTTATTGTTCGGGATTTTTTAAAATTTTTTGGGAAGGATTTTTGGCCCCAAAC
455 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAC
* *
4759072 TTGGCAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
520 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
4759137 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
585 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
4759202 GCAAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
650 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * *
4759267 AGTGGCGAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACCC
715 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCC
* ** * *
4759332 CCTGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGT-CCCC
780 CCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
* * * *
4759396 TGGCGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCTGCAAGTGCTGTCGCA
845 -GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
4759451 ACCCTCGGTTTCGTCTGATCTTAGACTGGAAATGAACTCCGTATGATTAGACTGGGAATGAACTC
1 ACCCTCGGTCTCGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT-
* * * *
4759516 CCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCCGGTGCTCAGCCAGCCAGAGGGGCGGGATG
65 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* ** * * * *
4759581 CGCAAGCTGGGGATCGATCGGGTTGCCTTCTGCGTGCTACCGATCCTACTGCCGCAACCATCGGT
130 CGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT
* * *
4759646 CCCGTCTGATCTTAGACTGGGAATGAACTCGGTATGCCTAAGCCAACCGACGAAACTAGCGGGCG
195 CCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG
* *
4759711 GGCGGGCGGGCACTACGTCGGCAAGATAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
260 GGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
4759776 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGACTTGTAAATTCATA
325 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
4759841 CAATGGTCCCTTAAGCCTTCAAGTGAAGCTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
390 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
* * * ** * *
4759906 TTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATCTTTTCAGAAGGATTTTTCGCCCCAAAC
455 TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAC
* *
4759971 TTGGGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAGTTCAGCTAAAAACTCGAAGT
520 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
4760036 GTACGAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCCACTGGCA
585 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
4760101 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATA
650 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
4760166 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT-CTGTACA-----C--CC
715 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC-GCACACCCCCCGACC
* * * * * * *
4760223 CCCCGATCGCCGGAACCCTAATGCCGTCGGTCAGGTTCTTCGACGTTGCTCCGGCGATGGTACCC
779 CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
* * * * *
4760288 CGACGAAGAAAAATGCGGCACCAGCACATGCTCGACCCCAGCATGTGCTGCTGAA
844 CGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
** * *
4760343 ACCCTCGGTCAGGTCCGATCTTAGACTGGGAATTAACTTCGTATGCTTAGACTGGGAATGAACTC
1 ACCCTCGGTCTCGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * *
4760408 CGTATGCCTAAGTCAACCCACAAAATGAGCGTGCGGGCGTTCAGCCGACCAGAGGGGCGGGATGC
66 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * *
4760473 GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGTTGCCGAT-CTGCTGCTTGCAACACTCGGT
131 GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC-CGCAACCCTCGGT
** *
4760537 CCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACG
195 CCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG
* * * * *
4760602 AGCGGGCGGGCACTACGCCGGCCAGAGAGACAGGATGCGCAAGCCGTTGATCGATTGGGTGGTAG
260 GGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* **
4760667 GTGGGTTTAGGCACATCTTCATATTGCTGCATGCCAATGCCATTTTTATGGCTTCCAAATTCATA
325 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * * * * *
4760732 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGTAGGGCGGCTCATTTTTTATTTTTCATGA
390 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
* * * * *
4760797 -TTTTCAAAATGTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGCAAGGAATTTTGGTCCCAAA
455 TTTTTGAAACT-TTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAA
* * *
4760861 CTTGGCAGGCATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
519 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
4760926 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
584 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
4760991 AGCAAACCTTTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
649 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * * *
4761056 AAGTGGCGAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGACC
714 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACC
* ** * *
4761121 CCCTGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGT-CCC
779 CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
* * * * *
4761185 CTGGCGAAGAAAAATGCGACACCAGCACATGCCTGAGCCCTGCAAGTGCTGTCGCA
844 C-GGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * * *
4761241 ACCCTCGGTTTCGTCTGATCTTAGACTGGAAATGAACTCCATATGATTAGACTGGGAATGAACTC
1 ACCCTCGGTCTCGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * *
4761306 CGTATGCCTAAGTCAACCCACGAAATGAGCGTGCCGGTGCTCAGCCAGCCAGAGGGGCGGGATGC
66 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* ** * * * *
4761371 GCAAGCTGGGGATCGATCGGGTTGCCTTCTGCGTGCTACCGATCCTACTGCCGCAACCATCGGTC
131 GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
* * *
4761436 CCGTCTGATCTTAGACTGGGAATGAACTCGGTATGCCTAAGCCAACCGACGAAACTAGCGGGCGG
196 CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
* *
4761501 GCGGGCGGGCACTACGTCGGCAAGATAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
261 GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
*
4761566 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATAC
326 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* *
4761631 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGAT
391 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * ** * *
4761696 TTTTGAAACCTTTTACGGTTCGCGCAATTTTTTAAAATTTTTTCAGAAGGTGTTTT-GCCTTCAA
456 TTTTGAAACTTTTTACGGTTCG-G-GATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC-CCAA
* * *
4761760 ACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCGAAAAACTCGAT
518 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
* * * *
4761825 GTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCACATTTCAGACACTTTAAAGGCTACTGA
583 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* * *
4761890 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTCATGATGGA
648 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
*
4761955 TTGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGAC
713 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGAC
* * * *
4762020 CCCCCGATCGTCGGAA-CCCAATGCC-ACCGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCC
778 CCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
** * * * * *
4762083 CCGAG-GCTGAAAAATACGGCACCAACACATGCCTGAGCCCAGCATGTGCTACCGTA
843 CCG-GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
**
4762139 ACCCTCGGT-TCGATCCGATCTTAGACTGGGAATGAACTCTATATGCTTAGACTGGGAATGAACT
1 ACCCTCGGTCTCG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
*
4762203 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCGCTCAGCCGGCCAGAGGGGCGGGATG
65 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
* * *
4762268 CGCAAGCCGGGGATCGATCAGGG-CCCCTTCTGCGTGCTGCCAATCCTGCTGCCGTAACCCTCGG
130 CGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGG
** * * *
4762332 TCCAATCCGATCTTAGAGTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGGC
194 TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-
* * * *
4762397 AGGCGGGCGGGCGGGCACCACGCCGGCCAGAGAGACGGGATGCGCAAGGCATGGATCGATAGGGT
256 -GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* * *
4762462 GGTTGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCCTGTAAAT
320 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
* *
4762527 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTGATGGAAAGACGACTCGTTTTCTATTTTT
385 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * * *
4762592 CAAGATTTTTGAAACTTTTTGCGCTTCGGGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCC
450 CATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCC
* * * * *
4762657 CAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAGAAAACAATTTAGCCAAAAACTC
515 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
4762722 GAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTAC
580 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
4762787 TGGCAGCATACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCCAGGTTTGATGAG
645 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
*
4762852 GGATAGGGGGCCAATATAAGCGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
710 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * * * * *
4762917 GGCCCCCCGATCG-CTGAAACCTCAATGTCGTCGGTCAGGTTCTCTGACGATGCTTCAACGATGG
775 GACCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * * * * * * *
4762981 TGCGCCGGAGAAGAAAAATGTGGCACCAACACAAGCTCGAGCTCAACATGTGCTGTCGCA
839 TGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
4763041 ACCCTCAGTCCGATCCGATCCGATCATAGACTGGGAATGAACCCCGTATGCTTAGATTGGGAATG
1 ACCCTCGGT-C--T-CG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATG
* * * * *
4763106 AACTCCGTATGCCTACGTCAACCCACGAAACGAGGGTGCGGGTGCTCAACCGTCCAGAGGGGCGG
61 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
* * * *
4763171 GATGCGCAAGCCGAGCATCGA-CGGGT-CACC-C--C-T-CTG-C-A--C-GCTG-C-TAA-CCT
126 GATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
* *
4763221 CGATCCAGTCTGAT-TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---
191 CGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG
* * * *
4763282 -GCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGAAAGCTGTGGATCGATGGGGTG
256 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* * ** *
4763346 GCAAGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCATGTAAATT
321 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * * *
4763411 CATACAATGGTCCCTTAAGCCTTTACATGAAGTTTCATGGCAAGATGACTCGGTTTCTATTTTTC
386 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
4763476 ACGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
451 ATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCC
* * * * * * *
4763541 AAACTTGGTAGATGTGATCCTTGTATTTTTATTGGCATGCATAGAACAATACAGCTAAAAACTCT
516 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
* * ** * * * * ** * **
4763606 AAGGGTAC-TG--TCAG-CA-AACTTGTAAAATCTCAA-TGGCTACTTTTGTTGACACTTTAATG
581 AAGTGTACAAGATTTTGTGACCATTTG-AAAA----AAGTGTCCCCATTT-CAGACACTTTAATG
* * * * *
4763665 GCTACTGTCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTATGAGTTCTCAAGGTTTG
640 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* * * *
4763730 ATGAGGGATAGGGAGCCAATATAAGGGCTAAGTACCAGTACCCATCACACATCATGTGCGCACAC
705 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CAC
* ** * *
4763795 ACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCTGGCAATGCTCC
768 A-CCCCCC-GACCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC
* * * * * * *
4763860 GGCGATGGTGCCCCGGTGAAGAAAAATTCGGCACCAGTAAATGCTCGAGCCCAGCATGTGCTGCT
831 GACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
4763925 GCA
896 GCA
* * *
4763928 ACCCTTGGTC-CGATCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGAAATGAACT
1 ACCCTCGGTCTCG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACT
* * * * *
4763992 TCGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCGCTCAGTCTGCCAGAGGGGCAGGATG
65 CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG
** * * * * *
4764057 CGCAAGCCAAGGATCGAACGGGTCCCCCTCTGCGTGCTGCCGATCTTGATGCCACAACCCTTGGT
130 CGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGT
* * *
4764122 CTGGCCTGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGGCA
195 CCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G--
* ** *
4764187 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGCAGATCGATAGGGTT
256 GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
4764252 GTAGGTGGGTTTAGGCACATCTTCATATTTTTCTGCATGCCAATCCCATTTTTATGGCTTGTAAA
321 GTAGGTGGGTTTAGGCACATCTTCATA--TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
4764317 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
384 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * *
4764382 TCACGATTTTTGAAACTTTTTAGGGTTCAGAATTTTTT-AAATTTTTTTCGAAGGAGTTTTGGCC
449 TCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC
* *
4764446 CCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGTCATGCACAAAAAAATTCAGCTAAAAACT
514 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
4764511 TGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTA
579 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* *
4764576 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGCGTGTGAGTTCTCAAGGTTTGATGA
644 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
4764641 GGGATAGGGGGGCAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACTCCC
709 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCC
* * * * * *
4764706 CCCGACCCCCCCGATCATCGGAACCTCAATGCCGCCGATCAAGTTCTCCGACGATGCTCCGACGA
772 CCCGA-CCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGA
* * * * *
4764771 TGGTGCCCTGGTGAAGAAAAATACGACACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCA
836 TGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* *
4764834 ACCCTCGGTC-CGGTCCGATCTCAGACTGGGAATGAACTCCTTATGC
1 ACCCTCGGTCTC-GTCCGATCTTAGACTGGGAATGAACTCCGTATGC
4764880 CTAAGTCAAC
Statistics
Matches: 7104, Mismatches: 895, Indels: 224
0.86 0.11 0.03
Matches are distributed among these distances:
878 4 0.00
879 5 0.00
880 2 0.00
882 126 0.02
883 428 0.06
884 3 0.00
885 5 0.00
886 10 0.00
887 138 0.02
888 386 0.05
889 356 0.05
890 16 0.00
891 665 0.09
892 170 0.02
893 9 0.00
894 5 0.00
895 8 0.00
896 368 0.05
897 434 0.06
898 975 0.14
899 698 0.10
900 1045 0.15
901 14 0.00
902 287 0.04
903 1 0.00
904 213 0.03
905 12 0.00
906 235 0.03
907 340 0.05
908 135 0.02
910 2 0.00
911 5 0.00
912 4 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
ACCCTCGGTCTCGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
GCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC
CGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
TTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACT
TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCC
CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCG
GCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
Found at i:4762209 original size:26 final size:26
Alignment explanation
Indices: 4762158--4762210 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4762148 TCGATCCGAT
*
4762158 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4762184 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4762210 C
1 C
4762211 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4763103 original size:26 final size:26
Alignment explanation
Indices: 4763067--4763117 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
4763057 GATCCGATCA
4763067 TAGACTGGGAATGAACCCCGTATGCT
1 TAGACTGGGAATGAACCCCGTATGCT
* *
4763093 TAGATTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACCCCGTATGC
4763118 CTACGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACCCCGTATGCT
Found at i:4765904 original size:26 final size:26
Alignment explanation
Indices: 4765868--4765920 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4765858 CTAGTCCGAT
*
4765868 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4765894 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4765920 C
1 C
4765921 CTAAGTAAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4766798 original size:26 final size:26
Alignment explanation
Indices: 4766762--4766812 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
4766752 CGTCCGATCC
*
4766762 TAGACTGGGAATGGACTTCGTATGCT
1 TAGACTGGGAATGAACTTCGTATGCT
4766788 TAGACTGGGAATGAACTTCGTATGC
1 TAGACTGGGAATGAACTTCGTATGC
4766813 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.16, G:0.29, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTTCGTATGCT
Found at i:4767695 original size:26 final size:26
Alignment explanation
Indices: 4767666--4767717 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
4767656 TGGTCTGATT
*
4767666 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
*
4767692 TTAGATTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
4767718 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.15, G:0.27, T:0.31
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:4768596 original size:26 final size:26
Alignment explanation
Indices: 4768560--4768610 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
4768550 CGTCCGATCC
*
4768560 TAGACTGGGAATGGACTTCGTATGCT
1 TAGACTGGGAATGAACTTCGTATGCT
4768586 TAGACTGGGAATGAACTTCGTATGC
1 TAGACTGGGAATGAACTTCGTATGC
4768611 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.16, G:0.29, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTTCGTATGCT
Found at i:4769492 original size:26 final size:26
Alignment explanation
Indices: 4769463--4769514 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
4769453 TGGTCTGATT
*
4769463 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
*
4769489 TTAGATTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
4769515 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.15, G:0.27, T:0.31
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:4770393 original size:26 final size:26
Alignment explanation
Indices: 4770342--4770394 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4770332 CCAGTCTGAT
* *
4770342 CTTAGATTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4770368 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4770394 C
1 C
4770395 CTAAGCCATC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4771977 original size:26 final size:26
Alignment explanation
Indices: 4771948--4772000 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4771938 CCGGTCTGAT
4771948 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4771974 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4772000 C
1 C
4772001 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4772462 original size:892 final size:890
Alignment explanation
Indices: 4770368--4779156 Score: 11085
Period size: 902 Copynumber: 9.8 Consensus size: 890
4770358 ACTTCATATG
* * * * * *
4770368 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCATCTGATGAAACGAGCGGGCGTGCGGGCGGG
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG-G-GCGC-GG
* * *
4770433 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGGTAGGGTCGTAGGTGGGT
63 CAGGCACTACGCC-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
4770498 TTTGGCACATCTTCGTATTTCTGCATGCCAATGCCA-TTTTAGAGGCTTGTAAATTCATGCAATG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA-TGGCTTGTAAATTCATACAATG
** * *
4770562 GTCCCTTAAAACTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTC
191 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * *
4770627 AAAACTTTTTACGGTTCGGGACTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
256 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
4770692 AGACATCATCCTTGTATTTTTGTTGGCATGCATAAAGAAATTTAGCTAAAAACTCGAAGTGTACA
321 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
4770757 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
386 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
4770822 CCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * *
4770887 CCAATATAAGGGCCAAGTACCAGCACCCATCGAACAGCATGCGCGCACACCCCCCGACCCCCCCG
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * * *
4770952 ATC-TCTGGAACCCCAATGCCGTCGGTCAGGTTTTTCAGTGATGCTCCAGCGATGGTGGCCCGAC
581 ATCGTC-GGAACCCCAATGCCGCCGGTCAGG-TTCTC--T--T-C-CGA-CGATGGTGCCCCGAC
** * **
4771016 GAAGAAAAATGTAGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCATAACCCTCGGTCCGGT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
4771081 CCGATCTTAGACT-GG---G-A------ATG---A-AC------T----T-CGTATGCCTAAGTC
702 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * *
4771120 AACCCACGAAACAAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGAAGCGCAAGCCGGGGATC
767 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC
** * * * ** * * *
4771185 GACCGGGTCCCCCTCTGCGTGTTGTCGATCTTGCTGCTGCAACCCTCGATCTGATCCAAT
832 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCG-TCCGGTCCGAT
*
4771245 CTTAGACTAGGAAAGAAC-TCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG-GGCA
1 CTTAGACTAGGAATGAACTTC-GTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGCGGCA
* *
4771308 GGCACTACGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATCGGTAGGGTGGTAGGTGGGTTT
65 GGCACTACGCC-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
4771373 AGGCACATCTTCATATTTCTGCATGCCAATGCCA-TTTTAGAGGCTTGTAAATTCATGCAATGGT
129 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA-TGGCTTGTAAATTCATACAATGGT
* **
4771437 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAA
193 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * *
4771502 AACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAG
258 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * * * *
4771567 ACGTGATACTTGTATTTTTTTTGGCTTGCACAAAGAAATTCAGTTAAAAACCCGAAGTGTACAAG
323 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
4771632 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAATGGCAGCAAACT
388 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
4771697 TGTAAAATCTCAAATACTCTTTAAAGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
453 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * *
4771762 AATATAGGGGCCAAGTACCAGCACCCATTGCACATCATATGCGCATACCCCCCGGCCCCCCCGAT
518 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
* * * * *
4771827 CATCGAAATCCCAATGCCGCCGGTTAGG-T-T-TTCCGACGATGGTGCCCCCACGAAGAAAAATG
583 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTTCCGACGATGGTGCCCCGACGAAGAAAAATG
* * * * * *
4771889 CGACACCAGCACATGCCCGAGCCTAGCATGGGCTGCCGTAACCCTCGATCCGGTCTGATCTTAGA
648 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGA
4771954 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
713 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * * ** *
4772019 CGAGCGTGCGAGTGCTCAGCTGGACAGAGGGGTGGGATGCACAAGCCGGGGATCGACCGGGTCTC
778 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCC
* * * * * ** * *
4772084 TCTCTGCGTGTTGCC-ATTCCAGTTGCCATAACTGTCAGTCCAGTCTGAT
843 CCTCTGCGTGCTGCCGA-TCCTGCTGCCACAACCCTC-GTCCGGTCCGAT
*
4772133 ATTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGTG
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC--GCG-G
* *
4772198 CAGGCACTACGCCAGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGGGT
63 CAGGCACTACGCC-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** * *
4772263 TTAGGCACATCTTTATATTTCTGTGTGACAATACCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
** *
4772328 TCCCTTAAGCCTTCACGTGAAGTTTCATGGGTAGACGACTCGTTTTCTATTTTTCATAATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * * *
4772393 AAACTTTTTACGATTTC-AGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCGCCAAACTTGTT
257 AAACTTTTTACG-GTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
* *
4772457 AGACGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGGTAAAAACTCGAAGTGTACA
321 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
** *
4772522 AGATTTTGTGACCATTTGAAAAAAGTGTAGCCATTTCAGACACTTTAATGGCTACTAGCAGCAAA
386 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * **
4772587 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGAGATAGGCAG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
4772652 CCAATATAATGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCACCCTCCGCCCCGC
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCC-CGGCCCC-C
* ** * *
4772717 CCGATCATCGGAACCCCAATGCCGCCGACCAGGTTCTC-T--GATGATGGTGCCCC-AGCAAAGA
578 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTTCCGACGATGGTGCCCCGA-CGAAGA
* * * * * * * *
4772778 AAAATGCGACACCAACACATGCCCGAGCCTAGCATGGGCTACTGCAACCCTCGGTCTGGTCTGAT
642 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
*
4772843 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTATGCCTAAGTCAACCC
707 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* *
4772908 ACGAAACGAGCGTGCGGGCCCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTCG
772 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCG
* * * * * *
4772973 AGTCCCCCTCTACATGCTGCCGATCCTGCTGTCACAACCCTCGGTCCGATTCGAT
837 GGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTC-GTCCGGTCCGAT
* * *
4773028 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGAAC-AAACGAGCGGGCGGGCG-GGCA
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCG-ACGAAACGAGCGGGCGGGCGCGGCA
*
4773091 GGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
65 GGCACTACGCCG-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * *
4773156 AGGCACATCTTCATATTTTTGCGTGCCAAAGCAATTTTTATGGCTTGTAAATTCATATAATGGTC
129 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * *
4773221 CCTTAAGCCTTCACGTGAATTTTCATGGCAAGATGACTCGTTCTCTATTTTTGATGATTTTTGAA
194 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* ** * *
4773286 AGTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCAAATGGATTTTTGGCCCCGAACTTGGTAG
259 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAA-GGAGTTTTGGCCCCAAACTTGGTAG
* * * * *
4773350 ACGTGATCCTTGTTTTTTTGTTGGCATGCAAAAAAAAATTCAGCCAAAAACTCGAAGTCTACAAT
323 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
4773415 ATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCGGCAAACC
388 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * * *
4773480 TGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGTTTGATAAGTGATAAGGGGCC
453 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *
4773545 AATATAAGGGCCAAGGACCAGCACCCATTGCACATCATGTGCGCACACCCCTCCCGGCCCCCCCG
518 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCCGGCCCCCCCG
* * *
4773610 ATCGTTGGAACCCCAATGTCGCCCGTCAGGTTCTCCAGCAATGCTCCGACGATGGTGCCCCGACG
581 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT----C--T--TCCGACGATGGTGCCCCGACG
* * *
4773675 AAGAAAAATGCGGCACCAGGACATGCCCGAACCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
638 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
* * **
4773740 CGATCTTGGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGGACTTTGTATGCCTAAGTCA
703 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * *
4773805 ACCCATGAAATGAACGTGCGGACGCTCAACCGGCCAGAGGGGTGGGATGCGCAAGCC-GGGATCG
768 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* * * * * *
4773869 GTAGGGTCCCCCTCTGTGTGCTCCCGATCCTACTACCACAACCCTCAGTCTGGTCCGAT
833 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTC-GTCCGGTCCGAT
* * * *
4773928 CTTAGACTAGGAATGAACTTCCGAATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCAC--TA
1 CTTAGACTAGGAATGAACTT-CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGCGGCA
*
4773991 --CAC--CG--GCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
65 GGCACTACGCCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
4774050 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
130 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
** *
4774115 CTTAAGCCTTCACGTGAAGTTTCATGGGTAGACGACTCGTTTTCTATTTTTCATAATTTTTGAAA
195 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* * * * *
4774180 CTTTTTACGGTTTC-AGATTTTTTTAAATTTTTTTGGAAGGATTTTTGGCGCCAAACTTGTTAGA
260 CTTTTTACGG-TTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
4774244 CGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGA
324 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
** *
4774309 TTTTGTGACCATTTGAAAAAAGTGTAGCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCT
389 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
*
4774374 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGCCA
454 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
4774439 ATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACACCCCCAGGCCCCCCCCGAT
519 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCCGAT
* * *
4774504 TGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATACTCCGACGATGGTGCCCTGACGAA
583 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCT----C--T--TCCGACGATGGTGCCCCGACGAA
* * *
4774569 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTCCA
640 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
* *
4774634 ATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAAC
705 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * *
4774699 CTACGAAATGGGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCAGGGATCGGT
770 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGT
* * * *
4774764 CGGGTCCCCCTCTGCGTGCTGCCAATCCTGTTGCCGCAACCCTCGGTTCGGTCCGAT
835 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTC-GTCCGGTCCGAT
* * *
4774821 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCATGCGGG
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC--GC-GG
* * *
4774886 CGGGCACTACGCCGACCAGAGACATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
63 CAGGCACTACGCCG-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * ** * * * *
4774951 TTTGGCACATCTTCACATTTCCACGTACCAAAGCCAATTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
*
4775016 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTAG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * * *
4775081 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGCGTTTTGGCCCCACACTTGGTA
257 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * * *
4775146 GACATTATCCTTGTATATTTTTTTGGCAAGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
322 GACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* **
4775211 AGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAAGCTACTGGCAGCAAA
386 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
4775276 CCTGTAAAATCTCAGATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** *
4775341 CCAATATAAGATCCAAGTACCAGCACCCATCGCACATTATGTGCGCACACCCCCCCGG-CCCCCC
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCC
* * **
4775405 -ATCGCCGGAACCCCAATGCCGCCGGTCAGGCTCTCCGGTGATGCTCCGACGATGGTGCCCCGTT
580 GATCGTCGGAACCCCAATGCCGCCGGTCAGG-T-T-C--T-CT--TCCGACGATGGTGCCCCGAC
* * * * * *
4775469 GAAGAAAAATGTGGCCCCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAAACCTCGGCCCGAT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
*
4775534 CCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
702 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * *
4775599 AACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCACAAGCCAGGGATC
767 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC
* * * * * * * *
4775664 GGTCGAGTCTCCCGCTGCATGCTGCCGATCTTGCTGCCACAACCCTCGATCTGGTTCAAT
832 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCG-TCCGGTCCGAT
* * *
4775724 CATAGACTAGGAATGAA-TTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCG-GGCG
1 CTTAGACTAGGAATGAACTT-CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGCGGCA
* * *
4775787 GGAACTACGCCGGCCAGAGAGATGGGATTCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
65 GGCACTACGCC-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
4775852 AGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAAAACAATGGTC
129 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
4775917 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTCTTTTTCATGATTTTTGAA
194 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * ** *
4775982 ACTTTTGA-GGTTCGGGATTTTTTAAAAATTTTTCGGAAGGAGTTTTGTTCCCAAATTTGGTAGA
259 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
4776046 CGTGATCCTTGTATTTTTGTTGGTAGGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
324 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
4776111 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCT
389 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
4776176 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
454 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * *
4776241 ATATAAGGGCCAAGTACAAGCACCCTTCGCACATCATGTGCGCACACCCCCTGG-CCCCCTGATC
519 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC
* * * ** **
4776305 GTCGGAACCTCAATACCGTCGGTCAGGTTCTCCAGTGATGGTCCGGTGATGGTGCCCCGGTGAAG
584 GTCGGAACCCCAATGCCGCCGGTCAGGTTCT-C-----T--TCCGACGATGGTGCCCCGACGAAG
* * * * ** * *
4776370 AAAAATGCGACACTAGCACAAGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTATGATCCAA
641 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA
* **
4776435 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGGGTAAGTCAACC
706 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * ** ***
4776500 CACGAAAACGAGCGTGCGGGCGCTCAGTCGGCCAGACGGGCAAGATGCGCAAATTAGGGATCGGT
771 CACG-AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGT
** * * *** *
4776565 CGGGTCCCCCTCTGAATGCTACCGATCCTGCTACGGTAACTCTCGGTCCGGTCCGAT
835 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTC-GTCCGGTCCGAT
* * * * * *
4776622 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAAAGAGCGTGCGGGCGGGCGGG
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC--GC-GG
* * * *
4776687 CGGGCACTACGTCAGCCAGAGAGACGGGATGCCCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
63 CAGGCACTACG-CCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4776752 TTAGGCACATCTTCATATTTTTGCACGCCAATGCCATTTTTATGACTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4776817 TCCATTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCCTTTTCTATTTTTCATGATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
4776882 AAACTTTTT-GGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
257 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * *
4776946 GACATGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAGTTCAGCCAAAAACTCGAAGTGTACAA
322 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
4777011 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACGCTTTAAT-GCTTACTGGCAGCAAA
387 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-TACTGGCAGCAAA
* *
4777075 CCTGTAAAATCTCAAATGCTTTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
4777140 CCAATATAAGGGCCATGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCACCCG
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* *
4777205 ATCG-CTAGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
581 ATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCT----C--T--TCCGACGATGGTGCCCCGAC
* * * * * * *
4777269 AAAGAAAAATGCCGCACCAGCACATGCTCGGGCACAGCATGTGCTGCCGTAACCCTCAGTCCGGT
637 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
* *
4777334 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGTATGTCTAAGTC
702 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * **
4777399 AACCCACTAAACGAGCGTGTGGGCACTCAGCAGACCAGAGGGGTGGGATGCGCAAGCC-GAAAAT
767 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGAT
* * * * * * * * * * * * * *
4777463 TGGCCGGGTCCCCTTCTACATGCTACTGATTCTACTACAACAACCCTCAATCTGGTCTGAT
831 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTC-GTCCGGTCCGAT
* * * * *
4777524 CTTAGATTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACAAGCGGGCGGGTG-GGCAT
1 CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGCGGCA-
* *
4777588 GCGAGCACTACGCCGACTAGAGAGACGGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGG
65 --G-GCACTACGCCG-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
4777653 TTTAGGCACATCTTCATATTTCTACATGCTAATGCCATTTTTATGGCTTGTAAATTCATACAATG
126 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
4777718 GTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGA-TTTT
191 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
** * * **
4777782 GAAAACTTTTTATAGTTCGGGATTTTTAAAAATTTTTTTGGAATGA-TTTTTACCCCAAACTTGG
256 G-AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGG
* *
4777846 TAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAAATCGAAGTGTA
320 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTGTA
* * *
4777911 CGAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACCGGCAGCA
384 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
4777976 AACATGTAAAATATCAAATGCT-TCTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGG
449 AACCTGTAAAATCTCAAATGCTCT-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * ** * *
4778040 GGGCCAATATAAGGGTCAAGTGCTGGCACCCATCACACATCATGTGCGCACACCCCCCCGACCCC
513 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCC
* * * * *
4778105 CCCGATCGTCAGAACCCCAATGCCGTCGATCAGGTTTTTCGATGATGCTCCA-GTCATGGTGCCC
577 CCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG-TTCTC--T--T-C-CGACG--ATGGTGCCC
* * * * ** *
4778169 CGAGGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTACTGTCAAAACCCTTGGT-
633 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
** ** * * * * * *
4778233 CAATTTGACCTTAGACTGGGAATGGACTCTGTATGCTTACACTGGGAATCAAATCCGTAT-CCTA
698 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
** * * * * * * *
4778297 AGTCAACCCATAAAACGAGCATGCGGCCGTTCCGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGG
763 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGG
*** * *
4778362 GATCAACCGGGTCCCCCTCTGCGTGCTGCCGAT-CTGCTGCCACAACCCTCGATCTGGTTCGAT
828 GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCG-TCCGGTCCGAT
* ** * *
4778425 CTTAGACTGGGAATGAAC-TCTGTATGCCTAAGATAAACCGACGAAAC-A---AGCAGGCG-GGC
1 CTTAGACTAGGAATGAACTTC-GTATGCCTAAG-CCAACCGACGAAACGAGCGGGCGGGCGCGGC
* *
4778484 AGGCACTACGTCGACCAGAGAGACGGGATTCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
64 AGGCACTACGCCG-CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * *
4778549 TAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAAAACAATGGT
128 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* *
4778614 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTCTTTTTCATGATTTTTGA
193 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* ** *
4778679 AACTTTTTGA-GGTTCGGGATTTTTTAAAAATTTTTTGGAAGGAGTTTTGTTCCCAAATTTGGTA
258 AACTTTTT-ACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
4778743 GACGTGATCCTTGTATTTTTGTTGGTAGGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
322 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
4778808 GATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTTAGACACTTTAAAT-CCTACTGGCAGCAAA
387 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT-AATGGCTACTGGCAGCAAA
*
4778872 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
4778937 GCCAATATAAGGTCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGCCCCCCC
515 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* * * *
4779002 GATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGCTGGCGCCCCCGA
580 GATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-C-----T--TCCGACGATGGTG-CCCCGA
* *
4779067 CGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGG
636 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* *
4779132 TCCAATCGTAGACTGGGAATGAACT
701 TCCGATCTTAGACTGGGAATGAACT
4779157 TCGCATGCCT
Statistics
Matches: 6916, Mismatches: 847, Indels: 279
0.86 0.11 0.03
Matches are distributed among these distances:
862 82 0.01
863 4 0.00
864 1 0.00
865 1 0.00
866 1 0.00
867 2 0.00
870 1 0.00
871 1 0.00
873 510 0.07
874 2 0.00
875 2 0.00
876 3 0.00
877 49 0.01
883 1 0.00
887 2 0.00
888 165 0.02
889 3 0.00
890 45 0.01
891 450 0.07
892 723 0.10
893 520 0.08
894 374 0.05
895 523 0.08
896 41 0.01
897 387 0.06
898 218 0.03
899 192 0.03
900 78 0.01
901 280 0.04
902 939 0.14
903 752 0.11
904 341 0.05
905 213 0.03
906 9 0.00
908 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
CTTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGCGGCAG
GCACTACGCCGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
TTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGT
CGGAACCCCAATGCCGCCGGTCAGGTTCTCTTCCGACGATGGTGCCCCGACGAAGAAAAATGCGG
CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTG
GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCT
CTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGTCCGGTCCGAT
Found at i:4772883 original size:26 final size:26
Alignment explanation
Indices: 4772843--4772895 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4772833 CTGGTCTGAT
*
4772843 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
4772869 CTTAGACTGGCAATGAACTCCGTATG
1 CTTAGACTGGCAATGAACTCCGTATG
4772895 C
1 C
4772896 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTCCGTATG
Found at i:4774672 original size:26 final size:26
Alignment explanation
Indices: 4774636--4774688 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
4774626 CCGGTCCAAT
4774636 CTTAGACTGGGAATGAACTAC-GTATG
1 CTTAGACTGGGAATGAACT-CTGTATG
4774662 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
4774688 C
1 C
4774689 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 1 0.04
26 25 0.96
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:4775575 original size:26 final size:26
Alignment explanation
Indices: 4775539--4775591 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4775529 CCGATCCGAT
4775539 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4775565 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4775591 C
1 C
4775592 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4776474 original size:26 final size:26
Alignment explanation
Indices: 4776436--4776487 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
4776426 ATGATCCAAT
*
4776436 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4776462 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4776488 GGTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4777042 original size:902 final size:899
Alignment explanation
Indices: 4770368--4790091 Score: 12553
Period size: 903 Copynumber: 21.6 Consensus size: 899
4770358 ACTTCATATG
* * * * * *
4770368 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCATCTGATGAAACGAGCGGGCGTGCGGGCGGG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--AACGGGCGGGCGGGCGGG
* *
4770433 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGGTAGGGTCGTAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
4770498 TTTGGCACATCTTCGTATTTCTGCATGCCAATGCCA-TTTTAGAGGCTTGTAAATTCATGCAATG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA-TGGCTTGTAAATTCATACAATG
** * *
4770562 GTCCCTTAAAACTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTC
193 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* *
4770627 AAAACTTTTTACGGTTCGGGACTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
258 GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
4770692 AGACATCATCCTTGTATTTTTGTTGGCATGCATAAAGAAATTTAGCTAAAAACTCGAAGTGTACA
323 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
4770757 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
388 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
4770822 CCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
453 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * *
4770887 CCAATATAAGGGCCAAGTACCAGCACCCATCGAACAGCATGCGCGCACACCCCCCGACCCCCCCG
518 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCCCG
* * * *
4770952 ATC-TCTGGAACCCCAATGCCGTCGGTCAGGTTTTTCAGTGATGCTCC-AGCGATGGTGGCCCGA
582 ATCGTC-GGAACCCCAATGCCGCCGGTCAGG-TTCTCCGTGATGCTCCGA-CGATGGTGCCCCGA
** * *
4771015 CGAAGAAAAATGTAGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCATAACCCTCGGTCCGG
644 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGG
4771080 TCCGATCTTAGACT-GG---G-A------ATG---A-AC------T----T-CGTATGCCTAAGT
709 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
4771119 CAACCCACGAAACAAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGAAGCGCAAGCCGGGGAT
774 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGAT
** * * * ** * * *
4771184 CGACCGGGTCCCCCTCTGCGTGTTGTCGATCTTGCTGCTGCAACCCTCGATCTGATCCAAT
839 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * *
4771245 CTTAGACTAGGAAAGAACTCTGTATGCCTAAGCCAACCGACG--AAACGAGCGGGCGGGCGGGCA
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* *
4771308 GGCACTACGCCGGCCAGAGAGACGGGATACGCAAGCCGTGGATCGGTAGGGTGGTAGGTGGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
4771373 AGGCACATCTTCATATTTCTGCATGCCAATGCCA-TTTTAGAGGCTTGTAAATTCATGCAATGGT
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA-TGGCTTGTAAATTCATACAATGGT
* **
4771437 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAA
195 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * * *
4771502 AACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAG
260 AACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * * * *
4771567 ACGTGATACTTGTATTTTTTTTGGCTTGCACAAAGAAATTCAGTTAAAAACCCGAAGTGTACAAG
325 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
4771632 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAATGGCAGCAAACT
390 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * *
4771697 TGTAAAATCTCAAATACTCTTTAAAGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
455 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * *
4771762 AATATAGGGGCCAAGTACCAGCACCCATTGCACATCATATGCGCATACCCCCCGGCCCCCCCGAT
520 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGAT
* * * * *
4771827 CATCGAAATCCCAATGCCGCCGGTTAGG---T---T--T--TCCGACGATGGTGCCCCCACGAAG
584 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTGATGCTCCGACGATGGTGCCCCGACGAAG
* * * * *
4771882 AAAAATGCGACACCAGCACATGCCCGAGCCTAGCATGGGCTGCCGTAACCCTCGATCCGGTCTGA
649 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGA
4771947 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
714 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * * **
4772012 CACGAAACGAGCGTGCGAGTGCTCAGCTGGACAGAGGGGTGGGATGCACAAGCCGGGGATCGACC
779 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTC
* * * * * * ** * ** *
4772077 GGGTCTCTCTCTGCGTGTTGCC-ATTCCAGTTGCCATAACTGTCAGTCCAGTCTGAT
844 GGGTCCCCCTCTGCGTGCTGCCGA-TCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * *
4772133 ATTAGACTAGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGTG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--AACGGGCGGGCGGGCGGG
* * * *
4772198 CAGGCACTACGCCAGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** * *
4772263 TTAGGCACATCTTTATATTTCTGTGTGACAATACCATTTTTATGGCTTGTAAATTCATACAATGG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
** *
4772328 TCCCTTAAGCCTTCACGTGAAGTTTCATGGGTAGACGACTCGTTTTCTATTTTTCATAATTTTTG
194 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * * * *
4772393 AAACTTTTTACGATTTC-AGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCGCCAAACTTGTT
259 AAACTTTTTACG-GTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* *
4772457 AGACGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGGTAAAAACTCGAAGTGTACA
323 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
** *
4772522 AGATTTTGTGACCATTTGAAAAAAGTGTAGCCATTTCAGACACTTTAATGGCTACTAGCAGCAAA
388 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * **
4772587 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGAGATAGGCAG
453 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
4772652 CCAATATAATGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCACCCTCCGCCCCGC
518 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCC-CCGGCCC-C
* **
4772717 CCGATCATCGGAACCCCAATGCCGCCGACCAGGTTCT-C-TGA---T-----GATGGTGCCCC-A
579 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTGATGCTCCGACGATGGTGCCCCGA
* * * * * * * * *
4772771 GCAAAGAAAAATGCGACACCAACACATGCCCGAGCCTAGCATGGGCTACTGCAACCCTCGGTCTG
644 -CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCG
* *
4772836 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGCAATGAACTCCGTATGCCTAAG
708 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
4772901 TCAACCCACGAAACGAGCGTGCGGGCCCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGA
773 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGA
* * * * * * *
4772966 TCGGTCGAGTCCCCCTCTACATGCTGCCGATCCTGCTGTCACAACCCTCGGTCCGATTCGAT
838 TCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * *
4773028 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGA--ACAAACGAGCGGGCGGGCGGGCA
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* *
4773091 GGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * *
4773156 AGGCACATCTTCATATTTTTGCGTGCCAAAGCAATTTTTATGGCTTGTAAATTCATATAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * *
4773221 CCTTAAGCCTTCACGTGAATTTTCATGGCAAGATGACTCGTTCTCTATTTTTGATGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * *
4773286 AGTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC-AAATGGATTTTTGGCCCCGAACTTGGTAG
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA-GGAGTTTTGGCCCCAAACTTGGTAG
* * * * *
4773350 ACGTGATCCTTGTTTTTTTGTTGGCATGCAAAAAAAAATTCAGCCAAAAACTCGAAGTCTACAAT
325 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
4773415 ATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCGGCAAACC
390 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * * *
4773480 TGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGTTTGATAAGTGATAAGGGGCC
455 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* *
4773545 AATATAAGGGCCAAGGACCAGCACCCATTGCACATCATGTGCGCACACCCCTCCCGGCCCCCCCG
520 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCCGG-CCCCCCG
* * * **
4773610 ATCGTTGGAACCCCAATGTCGCCCGTCAGGTTCTCCAGCAATGCTCCGACGATGGTGCCCCGACG
582 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGACGATGGTGCCCCGACG
* *
4773675 AAGAAAAATGCGGCACCAGGACATGCCCGAACCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
* * **
4773740 CGATCTTGGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGGACTTTGTATGCCTAAGTCA
711 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * *
4773805 ACCCATGAAATGAACGTGCGGACGCTCAACCGGCCAGAGGGGTGGGATGCGCAAGCC-GGGATCG
776 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* * * * * *
4773869 GTAGGGTCCCCCTCTGTGTGCTCCCGATCCTACTACCACAACCCTCAGTCTGGTCCGAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * *
4773928 CTTAGACTAGGAATGAACTTCCGAATGCCTAAGCCAACCGACG--AAA--------CGAGCGAGC
1 CTTAGACTAGGAATGAAC-TCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGC
* *
4773983 GGGCACTACACCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
65 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
4774048 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
130 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
** *
4774113 CCCTTAAGCCTTCACGTGAAGTTTCATGGGTAGACGACTCGTTTTCTATTTTTCATAATTTTTGA
195 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
* * * * * *
4774178 AACTTTTTACGGTTTC-AGATTTTTTTAAATTTTTTTGGAAGGATTTTTGGCGCCAAACTTGTTA
260 AACTTTTTACGG-TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
4774242 GACGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGGTAAAAACTCGAAGTGTACAA
324 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
** *
4774307 GATTTTGTGACCATTTGAAAAAAGTGTAGCCATTTCAGACACTTTAATGGCTACTAGCAGCAAAC
389 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
4774372 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGATAGGGGGC
454 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * *
4774437 CAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACACCCCCAGGCCCCCCCCG
519 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG--CCCCCCG
* * * * *
4774502 ATTGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATACTCCGACGATGGTGCCCTGACG
582 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGCTCCGACGATGGTGCCCCGACG
*
4774567 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTC
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
* * *
4774632 CAATCTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCA
711 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * *
4774697 ACCTACGAAATGGGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCAGGGATCG
776 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* * *
4774762 GTCGGGTCCCCCTCTGCGTGCTGCCAATCCTGTTGCCGCAACCCTCGGT-TCGGTCCGAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCT-GGTCCGAT
* * * **
4774821 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCATGCGGG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--AACGGGCGGGCGGGCGGG
* * *
4774886 CGGGCACTACGCCGACCAGAGACATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * ** * * * *
4774951 TTTGGCACATCTTCACATTTCCACGTACCAAAGCCAATTTTATGGCTTGTAAATTCATACAATGG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
*
4775016 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTAG
194 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * *
4775081 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGCGTTTTGGCCCCACACTTGGTA
259 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * * *
4775146 GACATTATCCTTGTATATTTTTTTGGCAAGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
324 GACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* **
4775211 AGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAAGCTACTGGCAGCAAA
388 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
4775276 CCTGTAAAATCTCAGATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
453 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** *
4775341 CCAATATAAGATCCAAGTACCAGCACCCATCGCACATTATGTGCGCACACCCCCCCGGCCCCCC-
518 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCG
* * **
4775405 ATCGCCGGAACCCCAATGCCGCCGGTCAGGCTCTCCGGTGATGCTCCGACGATGGTGCCCCGTTG
582 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGACGATGGTGCCCCGACG
* * * * * * *
4775470 AAGAAAAATGTGGCCCCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAAACCTCGGCCCGATC
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
*
4775535 CGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
711 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * *
4775600 ACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCACAAGCCAGGGATCG
776 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* * * * * * * *
4775665 GTCGAGTCTCCCGCTGCATGCTGCCGATCTTGCTGCCACAACCCTCGATCTGGTTCAAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * *
4775724 CATAGACTAGGAATGAATTCCGTATGCCTAAGCCAACCGACG--AAACGAGCGGGCAGGCGGGCG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* * *
4775787 GGAACTACGCCGGCCAGAGAGATGGGATTCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
4775852 AGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAAAACAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
4775917 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTCTTTTTCATGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * ** *
4775982 ACTTTTGA-GGTTCGGGATTTTTTAAAAATTTTTCGGAAGGAGTTTTGTTCCCAAATTTGGTAGA
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
4776046 CGTGATCCTTGTATTTTTGTTGGTAGGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
326 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
*
4776111 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCT
391 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
4776176 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
456 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * *
4776241 ATATAAGGGCCAAGTACAAGCACCCTTCGCACATCATGTGCGCACACCCCCTGGCCCCCTGATCG
521 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCG
* * * * ** **
4776306 TCGGAACCTCAATACCGTCGGTCAGGTTCTCCAGTGATGGTCCGGTGATGGTGCCCCGGTGAAGA
586 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * * * ** * *
4776371 AAAATGCGACACTAGCACAAGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTATGATCCAAT
650 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGAT
* **
4776436 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGGGTAAGTCAACCC
715 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * ** ***
4776501 ACGAAAACGAGCGTGCGGGCGCTCAGTCGGCCAGACGGGCAAGATGCGCAAATTAGGGATCGGTC
780 ACG-AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTC
** * * *** * *
4776566 GGGTCCCCCTCTGAATGCTACCGATCCTGCTACGGTAACTCTCGGTCCGGTCCGAT
844 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * *
4776622 CTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAAAGAGCGTGCGGGCGGGCGGG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAA-A-CGGGCGGGCGGGCGGG
* * * *
4776687 CGGGCACTACGTCAGCCAGAGAGACGGGATGCCCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4776752 TTAGGCACATCTTCATATTTTTGCACGCCAATGCCATTTTTATGACTTGTAAATTCATACAATGG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4776817 TCCATTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCCTTTTCTATTTTTCATGATTTTTG
194 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* *
4776882 AAACTTTTT-GGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
259 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * *
4776946 GACATGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAGTTCAGCCAAAAACTCGAAGTGTACAA
324 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
4777011 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACGCTTTAAT-GCTTACTGGCAGCAAA
389 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-TACTGGCAGCAAA
* *
4777075 CCTGTAAAATCTCAAATGCTTTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
453 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* *
4777140 CCAATATAAGGGCCATGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCACCCG
518 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC-CCCG
* * *
4777205 ATCG-CTAGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGAC
582 ATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGCTCCGACGATGGTGCCCCGAC
* * * * * *
4777269 AAAGAAAAATGCCGCACCAGCACATGCTCGGGCACAGCATGTGCTGCCGTAACCCTCAGTCCGGT
645 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGT
* *
4777334 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGTATGTCTAAGTC
710 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * **
4777399 AACCCACTAAACGAGCGTGTGGGCACTCAGCAGACCAGAGGGGTGGGATGCGCAAGCC-GAAAAT
775 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGAT
* * * * * * * * * * * ** *
4777463 TGGCCGGGTCCCCTTCTACATGCTACTGATTCTACTACAACAACCCTCAATCTGGTCTGAT
839 CGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * **
4777524 CTTAGATTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACAAGCGGGCGGGTGGGCATG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-AA-CGGGCGGGCGGGCGGG
* * * *
4777589 CGAGCACTACGCCGACTAGAGAGACGGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
4777654 TTAGGCACATCTTCATATTTCTACATGCTAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4777719 TCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGA-TTTTG
194 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
** * * * **
4777783 AAAACTTTTTATAGTTCGGGATTTTTAAAAATTTTTTTGGAATGA-TTTTTACCCCAAACTTGGT
259 -AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* *
4777847 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAAATCGAAGTGTAC
323 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTGTAC
* * *
4777912 GAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACCGGCAGCAA
387 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
4777977 ACATGTAAAATATCAAATGCT-TCTTAAGGGGGTGTGAGTTCTCGAAGTTTGATGAGGGATAGGG
452 ACCTGTAAAATCTCAAATGCTCT-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * ** * *
4778041 GGCCAATATAAGGGTCAAGTGCTGGCACCCATCACACATCATGTGCGCACACCCCCCCGACCCCC
516 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-GCCCC
* * * * * *
4778106 CCGATCGTCAGAACCCCAATGCCGTCGATCAGGTTTTTCGATGATGCTCCAGTC-ATGGTGCCCC
579 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGCTCC-GACGATGGTGCCCC
* * * * ** *
4778170 GAGGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTACTGTCAAAACCCTTGGT-C
642 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCC
** ** * * * * * *
4778234 AATTTGACCTTAGACTGGGAATGGACTCTGTATGCTTACACTGGGAATCAAATCCGTAT-CCTAA
707 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
** * * * * * * *
4778298 GTCAACCCATAAAACGAGCATGCGGCCGTTCCGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGGG
772 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGG
*** * *
4778363 ATCAACCGGGTCCCCCTCTGCGTGCTGCCGAT-CTGCTGCCACAACCCTCGATCTGGTTCGAT
837 ATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * ** *
4778425 CTTAGACTGGGAATGAACTCTGTATGCCTAAGATAAACCGACGAAACAA-------GCAGGCGGG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAG-CCAACCGACGAAA-AACGGGCGGGCGGGCGGG
* * * *
4778483 CAGGCACTACGTCGACCAGAGAGACGGGATTCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4778548 TTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAAAACAATGG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4778613 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTCTTTTTCATGATTTTTG
194 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
** *
4778678 AAACTTTTTGA-GGTTCGGGATTTTTTAAAAATTTTTT-GGAAGGAGTTTTGTTCCCAAATTTGG
259 AAACTTTTT-ACGGTTCGGGATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
4778741 TAGACGTGATCCTTGTATTTTTGTTGGTAGGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
322 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
4778806 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTTAGACACTTTAAAT-CCTACTGGCAGCA
387 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT-AATGGCTACTGGCAGCA
*
4778870 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTCCAGGTTTGATGAGGGATAGG
451 AACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* *
4778935 GGGCCAATATAAGGTCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGCCCCC
515 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCC
* * * *
4779000 CCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGCTGGCGCCCCC
579 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGACGATGGTG-CCCC
* **
4779065 GACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCC
642 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCC
* * * * * ** **
4779130 GGTCCAATCGTAGACTGGGAATGAACTTCGCATGCCTA-A----G--CCAACT--G-A--CAAAA
707 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC-CTA
***** * * * * * * *
4779183 AG--AGGGGGCG-GACGGGCGGGCGGGCACTTC-GCCGACCAGAGAGACGGGATGCGCAAGCC-G
771 AGTCAACCCACGAAACGAGCGTGCGGGCGC-TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG
* * ** ** * * * * * * * *** * *
4779243 TGGATCGATGGGGT---GGTAGGAGGGTTTAGGC-A-CAT-CT-TCATATTACTGCATGCCAAT-
835 -GGATCGGTCGGGTCCCCCTCTGCGTG-CT-GCCGATCCTGCTGCCACAACCCT-C-GGTC--TG
4779300 G-CC-ATT
893 GTCCGA-T
* * * * ** * * ** * **** * * ** *
4779306 TTTATGGCTTGCAAATTCA-TAC-AATGGTCCTTTAAGCCTTCACG-TGATGTTTCATGCCAAGA
1 CTTA-GACTAG-GAATGAACTCCGTAT-G-CC--TAAGCCAAC-CGACGA-AAAAC-GGGCGGGC
* * ** **** * * ***** **** * *** * *** **
4779368 TGACTCGTTTTCTATTTTTCATGATTTTCA-A-A-ACTTTTTTCGGTTTG-GGATTTTTAAAATT
57 GGGCGGGCGGGC-A---CT-ACGCCGGCCAGAGAGACGGGATGC-GCAAGCCG-TGGAT-CGA-T
**** * * * * ** ** * * *
4779429 TTTTTGGAAGGT--GTTTTGGCCCCAAACTTGGTA-GACGTG-AT-CC-TTG-TATTTTTGTTGG
113 AGGGTGGTAGGTGGGTTTAGG-CAC-ATCTTCATATTTC-TGCATGCCAATGCCATTTTT-ATGG
* * * * * ** **
4779487 CATGCAAAAAAAAATTCAGCTAAAAACTCGAAGT--GTACAAGATTTTGTGACAATTTGAAAAAG
174 CTTG------TAAATTCA--T-ACAA-T-G--GTCCCT-TAAG--CCT-T--C-ACGTG---AA-
* * * * * **** * * *
4779550 GTGTCCCCAT-TCCAGAC-ACT--TTAATGGCCACTGGCAGCAAACCTGTAATATCTCAAATGCT
215 GT-T--TCATGGCAAGACGACTCGTT--T-TCTA-T-TTTTC--A--TG--ATTTTTGAAA--CT
* * * * * * ** ** ** * ** ** *
4779611 CTTTAATGGGGT-GTGAGTTCTCGAGGTTTGAT--G-A-GAGATAGGGGGCCAATA-TAAGGGCC
264 -TTTTA-CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA-ACT--TGG--
* ** * * * ** ** * ********* * *
4779670 AAGTACCAGCACCCATTGCACATCATG-TGCGCACACCCCCCGGCCCCCCCGATCGCT-GAAACC
322 TAG-ACGTG-ATCC-TTGTA-TTTTTGTTG-G--CATGCACAAAAAAATTC-A--GCTAAAAACT
* * ** * ** *** ** *** **
4779733 CCAATGCCATCGGT-C-AGGTTCCCGGTGATGC-TCCGGCGATGGTG-CCCCGA-CGAAGA-AAA
377 CGAA-G---T--GTACAAGATT--TTGTGA-CCATTTGAAAAAAGTGTCCCC-ATTTCAGACACT
* ** ** * *** * ** *** *** **
4779792 AT-ATGGC-ACCAGCA-CATGCCCG--AGCCCAGCATGTGCTGCCACAACCCTCGGTCCG-G-TC
432 TTAATGGCTACTGGCAGCAAACCTGTAAAATC-TCAAATGCT-CTTTAA--GGGGGTGTGAGTTC
* ** * * **** * * * **
4779850 -CAATCTTAGACT-AGGAAT-GAACTCC-GTAT----GCCTAAG--CCA--ACCGA-CG-AAAAG
493 TCGAGGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCC-AAGTACCAGCACCCATCGCACATC
* * * * ** * * ** * ** * *
4779901 A-GCGGGCGAGCGGGCACTAC-GCCGACCAGAGAGACGGGATGCGCAA-GCCG-TGGATCGATGG
556 ATGTGCGC-A-C--ACCCCCCGGCC-CCCCGATCGTC-GGAACCCCAATGCCGCCGG-TC-A-GG
* * * * * * * ** * ** * * *
4779962 GT-T-GGT-A-G----GAGGGT-TTAGGCAC-ATCTTCATATTACTGCATGC-CAATGCCATTTT
612 TTCTCCGTGATGCTCCGACGATGGT-GCCCCGA-C-GAAGAAAAATGC-GGCACCA-G-CA----
* *** *** * * * * **
4780016 TATGGCTTTTAAATTCATACAATG-G-T-CCTTTAAGCCT---TCAC-GT--GATGTTTCA-TGG
667 CAT-GC--CCGAGCCCA-GC-ATGTGCTGCC-GTAACCCTCGGTC-CGGTCCGATCTTAGACTGG
* * * * *** * * ** ***
4780071 CAA-GACGACT-CGTTTTCTTTTTTCATGATTTTCAA--AACTTTTTTCGGTTTGGGATTTTTTA
725 GAATGA--ACTCCGTATGC----TT-A-GACTGGGAATGAAC-----TCCGTAT--GCCTAAGT-
* ***** * * *** * * * * *** * *
4780132 AAATTTTTTTGGAA-G-GTGTTTTGGC-CCCAAACTTGG-TAGACATGATCCTTGTATTTTTGTT
774 CAA--CCCACGAAACGAGCGTGCGGGCGCTC-AGC-CGGCCAG--A-GGGGC-GGGA----TG--
* * * *** **** *** **** * * * ** *
4780193 GGCATGCAAAAAAAAAAATTCAACTAAAAACTC-GAAGTG-TACAAGATTTTG-TG--ACAA--T
825 CGCAAGC--CAGGGATCGGTCGGGT-CCCCCTCTG-CGTGCTGC-CGATCCTGCTGCCACAACCC
* **** *
4780251 TTGAAAAAGGTGTCCCCAT
885 TCG--GTCTG-GT-CCGAT
* ** * * * ** * ** **** *
4780270 -TCCAGAC-ACTTTAATGGCCACTGGCAGCAAACCTGTAAAATCTCAATTG-CTCTTTAA-GGGT
1 CT-TAGACTA--GGAAT-G-AACT--CCGTATGCC--T--AAGC-CAACCGAC-GAAAAACGGGC
* * * ** * * * *
4780331 GTGAGTTCTCGAGGTTTGATGAGGG-A-TA-GGGGGCCA-ATATA-AGG--GC-CAAGTACC-AG
53 G-G-G----CG-GG--CG-GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG--CCGTG
* * * * ** ** * * ** ****** ** *
4780387 CACCCAT----T-GCACAT-CATGT-GCGCACACCCCCCCGCCCCCCCGATCACCGGAACTG-CA
106 GATCGATAGGGTGGTAGGTGGGTTTAG-GCACATCTTCATATTTCTGC-AT-GCC--AA-TGCCA
* * ** ** * * *** * **
4780444 ATGTCGTGG---GTCAGGTTC-TCCGATGATGCTCCGGCGATGGTGCC-CCGACAAAGAAAAATG
165 TTTTTATGGCTTGT-AAATTCATAC-A--ATGGTCC--C--TTAAGCCTTC-AC---G-TGAA-G
** ** * * * * *** * *** *
4780504 TGGCACCAGCACATGCCCGAGCCCAGTATGTGCTA--TTGCA--ACCCTCGGCCCGGTCCGATCT
216 TTTCA-TGGCA-A-G-ACGA-CTC-GT-T-TTCTATTTTTCATGATTTTTGAAAC--T----TTT
** *** *** *** * * *
4780565 TA-GACT-GGGATGAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAGGTCAACCCA
267 TACGGTTCGGGAT----TTTTTAAAATT-TTTTCGGAA-GGA----GT-T---TTGG-C--CCCA
* * * ** * **** * * * * * **
4780628 CGAAATGAGCGT-GA-GGGCATTCAGCCGGCCA-GAGGGGTGGGATGCGC-----AAGTCGGGGA
315 --AACT-TG-GTAGACGTG-A-TC--CTTG-TATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
*** * *** ** * ** * **
4780685 TCGAC-CG-GGTCCCCCTCTGCGTGCTGTCGATCC-TGCTGCTACAACCCTCAGTCCGAT-CCCA
371 AAAACTCGAAGT-GTAC-AAG-ATTTTGT-GA-CCAT-TTG--A-AA---AAAGT--G-TCCCCA
* * * * * * ** ***
4780746 TCTT-AG--A-TTGGGAATGAACTCCGTATGCCTAAGCCAACC-GATTAAACGAGCGGACGGGC-
421 T-TTCAGACACTT--TAATG-GCTAC---TGGC--AGCAAACCTG--TAAA--ATCTCAAATGCT
*** * ** * * * **** *
4780805 GGGT--GGGTGG-GTGGGCACTACGCCGGCTAGA-GAGACGGCAT-GCACATTCCTGGATTGATA
473 CTTTAAGGG-GGTGTGAGTTCT-CG-AGGTTTGATGAG--GG-ATAG--GGGGCC---AAT-ATA
* * * *** *
4780865 GGGTGCTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTGTTATGTTTGTA
526 AGG-GCCAAGT---ACCA-GCAC--C--C--A--TC-GCA---C-AT--CA-TG---TG--CG--
* ** *** * *** * * ** * *
4780930 AATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAA-GACGACTCGTTTTCTA-
563 CA--CACCCCCCGGCCCCCCGA-TCGTC--G-GAA----C--CCCAATGCCG-C-CG--GTC-AG
* * * ** *** * * ** **
4780993 TTTTTCACGT-TTTTTAAAACTTTTTATGGT-TCGGGATTTTTTAA-AATTTTTTTGGAAGGAGT
611 GTTCTC-CGTGATGCTCCGAC----GATGGTGCCCCGA----CGAAGAA---------AA--A--
** * * * ** * ** * ** *** *
4781055 TTTGGCCCCA-AACTTGAAAGACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAAATTCAGC
654 TGCGGCACCAGCAC----ATG-CCCGAGCCCAGCA----TG-TG-C-TGC-C-GTAACCCTC-GG
* * * ** ** * ** *
4781119 TAAAAACTCAAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCCCCAT--TTCAGACACG
704 T-----C-C---G-GT-C-CGATCTT-AGA-C-TGGGAATGAA--CTCCGTATGCTT-AGAC-TG
* * * * * ** * ** * * ** * * * * *
4781182 TTGAAGGCTACTGGCAGCAAACCT--GTAAAATCTC-AAATGCTCTTTAAGGGGGTG-TGAGTTC
750 -GGAATG-AACT--CCGTATGCCTAAGTCAACCCACGAAACGAGC-GT--GCGGGCGCTCAG-CC
* * ** ** * * ** ** * * *
4781243 --TCA-AGGTTTGATGAGGGATAG-G-GGGCCA-ATATAAGGGCCAAGTACCAGCAC-CCAT--T
807 GGCCAGAGG---G--GCGGGAT-GCGCAAGCCAGGGAT--CGGTCGGGT-CCCCCTCTGCGTGCT
* * * * * * *
4781299 GCAC-ATCATG-TGCGCACACCCCCCGGCCCCCCCGATCACCGAAACC
863 GC-CGATCCTGCTGC-CACAACCCTCGG----TCTGGT--CCG--A-T
** * * * ** * * ***
4781345 CCAATGCCGTAGGTCAGGTTCTCCGGCGATGCTCCGTTGATGGTGCC--CCGACGAAGAAAAATG
1 CTTA-GAC-TAGG-AATGAACTCC-G-TATG--CC--T-A---AGCCAACCGACGAA-AAACGGG
* * * * * * * * * * * *
4781408 C-AGC--AC---C-AGCAC-ATGCTCGAGCC-CAG-CATGTGCTGC-CACAACCCTCGG-TCCGG
52 CGGGCGGGCGGGCGGGCACTACGC-CG-GCCAGAGAGACGGGATGCGCA-AGCCGT-GGAT-CGA
** * ** * * * * * ** * **** *
4781461 TCCGATCTTAGACTGGG--AATGAAC-TC-T-GTATGCCT--AAGCCAA--CCGA-CGAAAAGAG
112 TAGGGTGGTAG-GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC-ATTTTTATG-G
** * *** *** * * ** * *** * * *
4781516 CGGCGGACAGGCGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
174 C-TTGTA-A--ATTCATACAAT-GGTC--CCTTA-AGCCTTCACGTG-AA---GT--TTC-AT-G
*** * ** ** * * * * *
4781581 GGTGGTAGGA-GGGTTTAGGTACATCTTCAT-ATTACTGCATGCCAATGCCATTTTTATGGCTT-
223 GCAAG-ACGACTCGTTT-TCTA-TTTTTCATGATT--T--TTG--AA--AC-TTTTTACGG-TTC
** * ** * ** * ***
4781643 GTAAATTCATACAATGGTCTTTTAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTTCT
275 GGGATTTTTTAAAAT--T-TTTT----C-GGAAG-GA-GTTT--TGGC----C--C-C--AAACT
* *** * * ** * **
4781708 T-TTTTTCATGAT-TTTCAAAACTTTTTACGGTTCGGGATTTTTTA-AAAATTTTTTGGAAGATG
319 TGGTAGACGTGATCCTT--GTA-TTTTT---GTT-GGCA---TGCACAAAA--------AA-A--
** *** * * ** ** *
4781770 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTGGAATGGAAAAAAAATTCAGCTA
363 -TTCAGCTAAAAAC-TCG-A-A-GTG-TACAAG-A---TTTT-G--T-G----ACCATT----TG
*** ** * * ** ** *
4781835 AAAACTCGAAGTGTACAAGATTTTTTGACAATTTGAAAAAGGTGTCCCCATTCCAAACACTTTAA
406 AAAA----AAGTGT-CCCCA-TTTCAGACACTTT----AA--TGGCTAC-TGGC-AGCA----AA
* * * * * * * * ** *
4781900 TGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG-GTGTGAGT-TCTCGAGG
453 ----C-CT-GTA--AAA--TCTCAAAT-GC---T-CT-TTAAGGGGGTGTGAG-TTCTCGAG-GT
* * * * * * * ** *
4781963 TT--TGATGAGG-GATAGGGGGCCA-ATATAAGGGCCA--AGTA-CTAGCACCCATTGCACATCA
500 TTGATGA-G-GGATA-GGGGGCCAATATA-AGGGCCAAGTACCAGC-A-C-C-CATCGCACATCA
* * * * * *
4782021 TGTGCG--CACCCCCC-GCCCCCCGATTGCCGGAACTCCAATGCCGTCGGTCAAGTTCTCCGACG
557 TGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TG
* ** * *
4782083 ATGCTTCGGTGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATG
621 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * **
4782148 TGCTGCCGTAACCCTTGGTCCGGTCCAATCTTAGACTGGGAATGAACTCTATATGCTTAGACTGG
686 TGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * *
4782213 GAATGAACTGCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCGTTCAGCCAGCCAGAGG
751 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
* * * * *
4782278 GGCGGGATGCGTAAGCCGGGGATCGATTGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCACA
816 GGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACA
*** *
4782343 ACCCTCGGTCCAATCCCAT
881 ACCCTCGGTCTGGTCCGAT
* * * *
4782362 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGCAGGCGGGCAGATGGG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--AACGGGCGGGC----GGG
* * * * * * *
4782427 CGGGTGGGCACTACGCCGGCTAGAAAGACGGCATGCACAAGCC-TGGATCAATAGAGTGGTAGGT
60 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
** *
4782491 GGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCGATTTTTATGGCTTGTAAATTCATACA
125 GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* **
4782556 ATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATT
190 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATT
* * * *
4782621 TTTGAAACTTTTTATGGTTCAGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGTCCCAAACTT
255 TTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* *
4782686 GGTAGACATGATCCTTGTATTTTTTTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGT
320 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
*
4782750 ACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
385 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * * *
4782815 AAACCTGTAAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGAAGAGGGATAGG
450 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
4782880 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-------GCCCCC
515 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
* *
4782938 CGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC--GA---T-----GATGGTGCCCCGGC
580 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTGATGCTCCGACGATGGTGCCCCGAC
* * * * **
4782993 AAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCAATCCGGT
645 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGT
*** * * *
4783058 TTTATCTTAGACTGAGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTAAGCCTAAGTC
710 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * * *
4783123 AACCCGCGAAACGAGCGTGCAGGCACTCAACTGACCAGAGGGGCGGGATGCGCAAGCCGGGGATC
775 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC
** * * * * * * *
4783188 GGTCGGGTCCCCCTCTATGTGCTGCTGATCCTACTACCGCAACCCTTGGTCTGATCTGAT
840 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * *
4783248 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--AAA----TGAGTGGGCGGGTG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* * * *
4783307 GGCACTACGCAGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAAGGTGATAGGTGGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * * *
4783372 AGGTACATCTTCATATTTTTGCCTACCAATGCCATTTTTATGGCTTCTAAATTTATACAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
4783437 CCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * * * *
4783502 ACTTCTTGCAGTTTGGGATTTTTTAAAATTTTTTGGGAAGGATTTTTGGCCCCAAACTTGGTAGA
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
4783567 CATGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
326 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * *
4783632 TTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAAACT
391 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
4783697 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGTGGCCA
456 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * * *
4783762 ATATAAGTGACAAGTACCAGCAACCATTGCACATCATGTGCG--CACCCCCTGGCCCCCCCGATC
521 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATC
* * * * * *
4783825 GTCGGAACCCCAACGCCGTCGGTCAGGTTCTCCGGCGATGCACCGGCGATGGCGCCCCGACGAAG
585 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGACGATGGTGCCCCGACGAAG
* * * * * * * *
4783890 AAAAATGCGGCTCCAGCACATGTCTGAGCCTAGCATGTGCTGCTGCAACCCTCTGTCCGGTCCAA
649 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGA
* * *
4783955 TCTTAGACTGGTAATGAACTCCATATGCTTAGACTGAGAATGAACTCCGTATGCCT-AGTCAACC
714 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * *
4784019 TACGAAACGAGCGTGCGGGCGTTCAGTCGGCCAGAGGGGCAGGATGCGCAAGTCGGGGATCGATC
779 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTC
* * * * ** * *
4784084 GGGTCCCCCTCTGTGTTCTACCGATCCTGCTACCGTAACCCTCGGTCCGGTCCAAT
844 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * * *
4784140 CTTAGACTAGGAATGAACTCTGTATGCCTAAGACAACTGACGAAACGAACGGGAGGACGGGCGAG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--AACGGGCGGGCGGGCGGG
* * * * * *
4784205 CGGGCACTGCACCTGCCAGAGAGACGGGATGTGCAAGCCGTGGACCGATAGGGTGATAGGTGGGT
64 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
4784270 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
129 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
*
4784335 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCGTTTTCTATTTTTCATGATTTTTG
194 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* *
4784400 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGTA-TTTTGGCCCCAAACTTGGT
259 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTGGCCCCAAACTTGGT
* * * *
4784464 AGACGTGATCCTTGGATTTTTGTTGGCATGCACAAAAACATTTAGGTAAAAACTCGAAGT-TGAC
323 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT-AC
* ** * *
4784528 AAGATTTTGTGAGCATTTGAAAAAAGTGTCTTCATTTCAGAAACTTTAATGGCGACTGGCAGCAA
387 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
4784593 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATGAGGGATAGGGA
452 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
** *
4784658 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT-C-CGTA----CC--CCTCCCG
517 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCG
* * * * * ** * *
4784715 ATCATCGGAACCCAAATGCCGCCGATCAGGTTCTCCAATTATGCTCCGGTGATGGTTCCCCGGCG
582 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGACGATGGTGCCCCGACG
* *
4784780 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTTCTGCCGCAACCCT---T---G--
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
4784837 -G-TC-----C--GG--T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
711 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* *
4784884 ACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
776 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* * ** * *
4784949 GCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTG-C-TGA---TC---CT-GCCCTAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * *
4784999 CTTAGACTGGGAATGAACTCCGTACGCCTAAGCCAACTGACG--AAA----CGAGCGGGAGGGCG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* * ** * * *
4785058 GGCACTACGTCGGCCAGAGAGACGGGATGCCCAAGCTATGGATCGGTAAGGTGGTAGGTGGATTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
4785123 AGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGTTTGTAAATTCATACAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
*
4785188 CTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * *
4785253 ACTTTTTACCGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAGTTGGCAGA
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
4785318 CCTGATCCCAT-TATTTTTGTTGGGATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
326 CGTGAT-CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* ** *
4785382 ATTTTGTGAGCATTTGAAAAAAGCATCCCCAATTCAGACACTTTAATAGG-TACTGGCAGCAAAC
390 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT-GGCTACTGGCAGCAAAC
* *
4785446 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGTGATAGGGGGC
454 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * *
4785511 CAATATAAGGGGCAAGTACCAGCACCCATCGCACATGATGTGCTCACA-----CTG--CCCCGAT
519 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGAT
* * * *
4785569 CGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC-AGCGATGGTGCCCCGACGA
584 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GTGATGCTCCGA-CGATGGTGCCCCGACGA
* * * * * *
4785633 AGAAAAGTACGGCACCAGCACATGCCCAAGCCAAGCATGTGCTGTCGCAA-CC-C--T-C-G---
647 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCC
4785689 G-TC-----C-------G------G--T-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
712 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * *
4785732 CCCTCGAAACGAGCGTGCGGGCGCTCAGCCGTCCAGAGGGGCGAGATGCACAAGCC-GAGGATCG
777 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAG-GGATCG
* ** *
4785796 GTCGGGTCCCCCTCTGCGTGCT---G---C--C-G-CA-AA-CCTCCGTCCAGTCTGAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * * * *
4785843 CATAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATG--TAACGAGCGGACGGGCGGGCG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* * * *
4785906 GGCACTACGTCGGCCAGAGAGATGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGATGGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
4785971 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * **
4786036 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTCAAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
** * * * * ** *
4786101 ACTTTTTGTGCTTCAGGATTTTTTAAAATTTTTTCAGAATGAGTTTTGGTACCAAACTTGTTAGA
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
*
4786166 CGTGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
326 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
4786231 TTTTGTGAGCATTTGAAAAAAGTGTTCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
391 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
4786296 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
456 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
**
4786361 ATATAAGGGATAAAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCTCCCCG
521 ATATAAGGG--CCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC-CCCCG
* * * * *
4786426 ATCGTCGGAACCTCAATGTCGCCGATCAGGTTCTCCGATGATGCTCCGACGATGGTGCCTCG-GG
582 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGCTCCGACGATGGTGCCCCGACG
* * * * *
4786490 AAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCATAACCCTTGGTCTGGTT
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
* *
4786555 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAATTCCGTATGCCTAAGTTA
711 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * **
4786620 ACCCACGAAACGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCTGGGGATCG
776 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* *
4786685 GTCGGGT-CCCC-C-GC-TG-T---G-TGCTGCTG-----A---TC---C-GGTCCAAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * * * *
4786723 CTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCAACG--AAACGAGCGGTCGAGCGGGCA
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* * * *
4786786 GGCACTACGCCGGCTAGAGAGACGGGACGCGCAAGCCATGGATCGATAGGGTGGTAGGTTGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
4786851 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
4786916 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* * * * * * * *
4786981 ACTTTTTGCGGTTCAGGATTTTTTAAATTTTTTTTGAAAGGATTTTTGGCCCCAAACATGCTAGA
261 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * *
4787046 CGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTAAGCTAAAAACTCGTAGTGTACAAGA
326 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
4787111 TTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
391 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * * *
4787175 ATAAAATCTAAAATGGTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCA
456 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * * *
4787240 ATATAAGGGCCAAGTTCCAGCACGCATCACACATCATGTGGGCACACCCCCCCGACCCCCCGATC
521 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATC
* * * * * * *
4787305 GCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCTGGCAATGGTGCCTCGATGAAG
585 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGCTCCGACGATGGTGCCCCGACGAAG
* * * * ** * * *
4787370 AAAAATTCGGCACCAGCACATGCCCAAGCCTAGGATGTGCTGCCACAACTCTCGGTTCGGTCTGA
649 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGA
* *
4787435 TCTTAGACTAGGAATGATCTCCGTATG-TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
714 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * **
4787499 CACGAAACGAGCGTGCGGGCGCTCAGTCGGCTAGAGGGGCAGGATGCGCAAGCTGGGGATCGGTC
779 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTC
* ** * * * *
4787564 GGGTCCCCCTCTACGTGCTGTTGATCTTGCTGTCACAACCCTCGCTCTGGTCTGAT
844 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * *
4787620 CTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACG--AAACGAGCGGGAGGGCGGGCG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
* * * *
4787683 GGCACTACGTCGGCCAGAGAGACGGGACGCGCAAGCCATGGATCGATAGGGTGGTAGGTTGGTTT
66 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
** *
4787748 AGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCTTACAATGGTC
131 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
*
4787813 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAA
196 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
* *
4787878 ACTTTTAATGGTTCGGGATTTTTTAAAATTTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAG
261 ACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * * * *
4787942 ACGTGATTCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAAATCAAAGTGCACAAG
325 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
4788007 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATTGCTACTGGGAGCAAACC
390 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
*
4788072 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGAC
455 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
4788137 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACACCCCCGGCCCCCCCGA
520 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCGG-CCCCCCGA
* * * * *
4788202 TCG-CTGTAACCCCAATGCCGTCGGTTAGGTTCTCTGACGATGCTCCGACGATGGTGCCCCGACG
583 TCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCG-TGATGCTCCGACGATGGTGCCCCGACG
* * * * * **
4788266 AAGAAAAATGTGGCACCAGCACATGCCCGCGCCTAGCATGTGTTGCCGCAACCCTTTGTCCGGTC
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTC
* * *
4788331 CGATCTTAGACTGGGAATGAACTCCGCATGCTTAGACTGGGAATGAACTCCATTTGCCTAAGTCA
711 CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * * * *
4788396 ACCCACGAAACGAGCATCCGGGTGCTCAACCGGCCAGA-GGGTGTGATGCTCAAGCCAGGGATCG
776 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG
* ** * ** * * *
4788460 GCCGGGTCCCCCTCTATGTGCTGTCGAT-C--CT---ATTA--C-CGATCCGGCCCGAT
841 GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
* * * * *
4788510 CTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAGGGAGCGGGCGGGCGGGCGGG
1 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA--AAACGGGCGGGCGGGCGGG
* * * * *
4788575 CGGGCGTGCTGCCGATCCTGCTACGGTCTGGTCTGATCTTAGACTATGAATGAACTCTGCATA-C
64 CGGGC--ACT----A--C-GC--CGG-C----CAGA---GAGAC--GGGATG----C-GCA-AGC
* * ** * ** * * ** * *** *
4788639 C-TAAGCCAATCGATGAAACGAGTGGGCGGACGGGCGGGTGGGCTCTACGTCGGCCAGAGAGACG
102 CGT--G--GATCGAT---A-GGGTGGTAGG--TGG-GTTTAGG--C-ACATC-TTCATA-TTTCT
* * * ***
4788703 GGATGCGCAA-GCCATGGATCGATAGCGTGGTAGGTGGGTT-TAGGCACCTCTTCATATTTCTGC
151 GCATGC-CAATGCCAT---T---T----T--TA--TGGCTTGTA---A---ATTCATA-CAATG-
* * * * * * *
4788766 GTGCC--AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
193 GTCCCTTAA-GCC---TTCA---CGTG-AAGTT--T-C-ATGG---C--AAGAC--GAC-T--CG
* **
4788829 TTTCATGGCAAGACGACTCATTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCAAGATT
236 TTT--T-------CTA-T--TTTTC-A----T---GATTTTTGAAACTTTTTACGGTTCGGGATT
* * * * *
4788894 TTTTATACTTTTTTCAGAAGGAGTTTTGGCCCCAAAGTTGGTAGACATGATCCTTGTATTTTTGT
281 TTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT
* * *
4788959 TGGCATGCATAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAGCATTTGAAAAA
346 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
4789024 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
411 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* *
4789089 TAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAG
476 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
** *
4789154 CACCCATCGCACATCATGTGCGTGCACCCCCCGGCCCCCTCGATC-ACTGGAACCCCAATGCCG-
541 CACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC-CGATCGTC-GGAACCCCAATGCCGC
* * *
4789217 CGTGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATGCGACACCAGCA
604 CG-GTCAGGTTCTCC-GTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCA
* * * * * * *
4789282 CATGCCCGAGCCCAGCATGTGCTACCGCAACCCTTGGTTCGATTCGATCTTAGACTGGGACTGAA
667 CATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAA
* *
4789347 CTCCGTATGCTTAGACTGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACGAGCGTACGG
732 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * * *
4789412 GCGCTCAACCGG-CAGAAGGGCAGGATGCGTAAGCTAGGTATCGGTCGGGTCCCCCTCTGCGTGC
797 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGC
* * * *
4789476 TGTCAATCCTGCTGCCGCAACCCTCTGTCTGGTCC-AGT
862 TGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGA-T
* * * * * *
4789514 CTTAGACTGGGAATGAAC-CTTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGTGGGCGA
1 CTTAGACTAGGAATGAACTC-CGTATGCCTAAGCCAACCGACGAAA--AACGGGCGGGCGGGCGG
* ** * * *
4789578 CCGGGCACTACGCCGATCAGAAAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTAGG
63 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* **
4789643 TTTAAGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
128 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
4789708 GTCCCTTAAGCCTTCACGTGAAGTTT-AGTGGCAAGACGACTCGTTTTCCTATTTTTCATGATTT
193 GTCCCTTAAGCCTTCACGTGAAGTTTCA-TGGCAAGACGACTCGTTTT-CTATTTTTCATGATTT
** ** * * *
4789772 TTGAAACTTTTTTTGGTTCGACATTTTTTAAAATTTTTTTGAAAGGTGTTTTGGCCCCAAACTTG
256 TTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* * *
4789837 GTAGACGTGATCCTAGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTA
321 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * * *
4789902 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGTTATTGGTAGCA
386 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
4789967 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
451 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
*
4790032 GGACAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACACCCCCGG
516 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCCGG
4790092 TCTGGTCCGA
Statistics
Matches: 14800, Mismatches: 2858, Indels: 2351
0.74 0.14 0.12
Matches are distributed among these distances:
838 3 0.00
839 1 0.00
840 2 0.00
841 1 0.00
843 1 0.00
844 44 0.00
846 1 0.00
847 120 0.01
848 432 0.03
850 34 0.00
851 454 0.03
852 112 0.01
853 2 0.00
855 2 0.00
856 2 0.00
857 1 0.00
858 45 0.00
859 100 0.01
860 2 0.00
862 86 0.01
863 5 0.00
864 2 0.00
866 4 0.00
867 31 0.00
868 96 0.01
869 1 0.00
871 2 0.00
873 523 0.04
874 45 0.00
875 228 0.02
876 352 0.02
877 165 0.01
878 4 0.00
879 124 0.01
880 381 0.03
881 14 0.00
882 53 0.00
883 54 0.00
884 12 0.00
885 17 0.00
886 278 0.02
887 5 0.00
888 156 0.01
889 101 0.01
890 95 0.01
891 473 0.03
892 866 0.06
893 778 0.05
894 409 0.03
895 530 0.04
896 57 0.00
897 820 0.06
898 355 0.02
899 389 0.03
900 598 0.04
901 279 0.02
902 988 0.07
903 1054 0.07
904 385 0.03
905 220 0.01
906 12 0.00
907 3 0.00
908 6 0.00
909 1 0.00
910 7 0.00
911 6 0.00
912 5 0.00
913 7 0.00
914 3 0.00
915 7 0.00
916 2 0.00
917 5 0.00
918 8 0.00
919 9 0.00
920 20 0.00
921 5 0.00
922 12 0.00
923 17 0.00
924 19 0.00
925 17 0.00
926 26 0.00
927 34 0.00
928 22 0.00
929 28 0.00
930 25 0.00
931 12 0.00
932 16 0.00
933 8 0.00
934 10 0.00
935 17 0.00
936 26 0.00
937 19 0.00
938 14 0.00
939 12 0.00
940 9 0.00
941 9 0.00
942 11 0.00
943 18 0.00
944 10 0.00
945 3 0.00
947 7 0.00
948 13 0.00
949 18 0.00
950 10 0.00
951 6 0.00
952 16 0.00
953 17 0.00
954 15 0.00
955 18 0.00
956 9 0.00
957 15 0.00
958 11 0.00
959 11 0.00
960 12 0.00
961 17 0.00
962 10 0.00
963 24 0.00
964 17 0.00
965 21 0.00
966 17 0.00
967 15 0.00
968 8 0.00
969 24 0.00
970 6 0.00
971 17 0.00
972 9 0.00
973 8 0.00
974 2 0.00
975 10 0.00
976 14 0.00
977 13 0.00
978 17 0.00
979 5 0.00
980 5 0.00
982 1 0.00
983 4 0.00
984 1 0.00
985 8 0.00
986 4 0.00
988 12 0.00
989 5 0.00
990 4 0.00
993 3 0.00
994 12 0.00
995 265 0.02
996 287 0.02
997 4 0.00
998 20 0.00
999 2 0.00
1001 3 0.00
1002 2 0.00
1003 6 0.00
1004 71 0.00
1005 2 0.00
1006 13 0.00
1007 14 0.00
1008 11 0.00
1009 2 0.00
1010 4 0.00
1012 6 0.00
1013 1 0.00
1014 8 0.00
1015 5 0.00
1016 14 0.00
1017 15 0.00
1018 14 0.00
1019 17 0.00
1020 9 0.00
1021 11 0.00
1022 9 0.00
1023 14 0.00
1024 272 0.02
1025 234 0.02
1026 217 0.01
1027 219 0.01
1028 178 0.01
1029 168 0.01
1030 206 0.01
1031 272 0.02
1032 188 0.01
1033 182 0.01
1034 164 0.01
1035 169 0.01
1036 778 0.05
1037 138 0.01
1038 126 0.01
1039 172 0.01
1040 139 0.01
1041 137 0.01
1042 91 0.01
1043 103 0.01
1044 80 0.01
1045 304 0.02
1046 89 0.01
1047 89 0.01
1048 89 0.01
1049 60 0.00
1050 55 0.00
1051 57 0.00
1052 65 0.00
1053 356 0.02
1054 207 0.01
1055 89 0.01
1056 182 0.01
1057 84 0.01
1058 221 0.01
1059 295 0.02
1060 190 0.01
1061 125 0.01
1062 95 0.01
1063 106 0.01
1064 93 0.01
1065 101 0.01
1066 164 0.01
1067 156 0.01
1068 406 0.03
1069 166 0.01
1070 90 0.01
1071 88 0.01
1072 123 0.01
1073 123 0.01
1074 541 0.04
1075 83 0.01
1076 50 0.00
1077 145 0.01
1078 56 0.00
1079 44 0.00
1080 47 0.00
1081 29 0.00
1082 43 0.00
1083 51 0.00
1084 66 0.00
1085 42 0.00
1086 39 0.00
1087 102 0.01
1088 192 0.01
1089 18 0.00
1090 18 0.00
1091 13 0.00
1092 236 0.02
1093 17 0.00
1094 26 0.00
1095 5 0.00
1096 12 0.00
1097 16 0.00
1098 8 0.00
1099 11 0.00
1100 10 0.00
1101 14 0.00
1102 19 0.00
1103 19 0.00
1104 12 0.00
1105 14 0.00
1106 3 0.00
1107 18 0.00
1108 12 0.00
1109 20 0.00
1110 14 0.00
1111 6 0.00
1112 14 0.00
1113 23 0.00
1114 11 0.00
1115 20 0.00
1116 14 0.00
1117 13 0.00
1118 14 0.00
1119 7 0.00
1120 7 0.00
1121 5 0.00
1122 15 0.00
1123 24 0.00
1124 14 0.00
1125 13 0.00
1126 10 0.00
1127 1 0.00
1128 2 0.00
1130 12 0.00
1131 10 0.00
1132 14 0.00
1133 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAACGGGCGGGCGGGCGGGCG
GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAA
ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCG
TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTGATGCTCCGACGATGGTGCCCCGACGAAGAA
AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGATC
TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGG
GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCTGGTCCGAT
Found at i:4777368 original size:26 final size:26
Alignment explanation
Indices: 4777339--4777390 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
4777329 CCGGTCCGAT
*
4777339 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
4777365 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
4777391 TCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.17, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:4780083 original size:708 final size:707
Alignment explanation
Indices: 4778396--4780588 Score: 3403
Period size: 708 Copynumber: 3.1 Consensus size: 707
4778386 GCTGCCGATC
* * * * * **
4778396 TGCTGCCACAACCCTCGATCTGGTTCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGATAA
1 TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAG-CCA
* * * *
4778461 ACCGACGAAACA-AGCAGGCGGGCAGGCACTACGTCGACCAGAGAGACGGGATTCGCAAGCCGTG
65 ACCGACGAAA-AGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTG
* * *
4778525 GATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
129 GATCGAT-GGGTGGTAGGAGGGTTTAGGCACATCTTCATATTACTGCATGCCAATGCCATTTTTA
* * * *
4778590 TGGCTTGTAAATTAAAACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG
193 TGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAAGATGACTCG
** ** * *
4778655 TTTTCTCTTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAAATTTTTTGGAAG
258 TTTTCT-TTTTTCATGATTTTCAAAACTTTTTTCGGTTTGGGATTTTTTAAAATTTTTTTGGAAG
* ** * * * *
4778720 GAGTTTTGTTCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGTAGGCACAAAAAAATTC
322 GTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTC
* * * **
4778785 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTTAGACAC
387 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCCATTCCAGACAC
4778850 TTTAAAT--CCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTC
452 TTT-AATGGCC-ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA--GGGGTGTGAGTTC
* *
4778913 TCCAGGTTTGATGAGGGATAGGGGGCCAATATAAGGTCCAAGTACCAGCACCCATTGCACATCAT
513 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
4778978 GTGCGCACACCCCCCGGCCCCCCCGATCG-TCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGT
578 GTGCGCACACCCCCCGGCCCCCCCGATCGCT-GAAACCCCAATGCCGTCGGTCAGGTTCTCCGGT
* * * * *
4779042 GATGCTCCGACGCTGGCGCCCCCGACGAAGAAAAATGCGGCACCAGCACATACCCGAGCCCAGCA
642 GATGCTCCGGCGATGGTG-CCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCA
4779107 TG
706 TG
* * *
4779109 TGCTGCCACAACCCTCGGTCCGGTCCAATCGTAGACTGGGAATGAACTTCGCATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
4779174 CTGACAAAAAGAGGGGGCGGACGGGCGGGCGGGCACTTCGCCGACCAGAGAGACGGGATGCGCAA
66 CCGACGAAAAGA-------G-CGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAA
4779239 GCCGTGGATCGATGGGGTGGTAGGAGGGTTTAGGCACATCTTCATATTACTGCATGCCAATGCCA
123 GCCGTGGATCGAT-GGGTGGTAGGAGGGTTTAGGCACATCTTCATATTACTGCATGCCAATGCCA
* *
4779304 TTTTTATGGCTTGCAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGCCAAGAT
187 TTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAAGAT
4779369 GACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGGTTTGGGA-TTTTTAAAATTTTTT
252 GACTCGTTTTCT-TTTTTCATGATTTTCAAAACTTTTTTCGGTTTGGGATTTTTTAAAATTTTTT
4779433 TGGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
316 TGGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
4779498 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCCATTCC
381 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCCATTCC
*
4779563 AGACACTTTAATGGCCACTGGCAGCAAACCTGTAATATCTCAAATGCTCTTTAATGGGGTGTGAG
446 AGACACTTTAATGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAG
*
4779628 TTCTCGAGGTTTGATGAGAGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACAT
510 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACAT
*
4779693 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCTGAAACCCCAATGCCATCGGTCAGGTTC-CCG
575 CATGTGCGCACACCCCCCGGCCCCCCCGATCGCTGAAACCCCAATGCCGTCGGTCAGGTTCTCCG
*
4779757 GTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGC
640 GTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGC
4779822 ATG
705 ATG
*
4779825 TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
4779890 CCGACGAAAAGAGCGGGCGAGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGA
66 CCGACGAAAAGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGA
4779955 TCGATGGGTTGGTAGGAGGGTTTAGGCACATCTTCATATTACTGCATGCCAATGCCATTTTTATG
131 TCGATGGG-TGGTAGGAGGGTTTAGGCACATCTTCATATTACTGCATGCCAATGCCATTTTTATG
* *
4780020 GCTTTTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTT
195 GCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAAGATGACTCGTT
4780085 TTCTTTTTTCATGATTTTCAAAACTTTTTTCGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGTG
260 TTCTTTTTTCATGATTTTCAAAACTTTTTTCGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGTG
*
4780150 TTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAAAATTCA
325 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC--AAAAAAAAATTCA
*
4780215 ACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCCATTCCAGACACT
388 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCCATTCCAGACACT
*
4780280 TTAATGGCCACTGGCAGCAAACCTGTAAAATCTCAATTGCTCTTTAA-GGGTGTGAGTTCTCGAG
453 TTAATGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAG
4780344 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCG
518 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCG
* * * * ** * * *
4780409 CACACCCCCCCGCCCCCCCGATCACCGGAACTGCAATGTCGTGGGTCAGGTTCTCCGATGATGCT
583 CACACCCCCCGGCCCCCCCGATCGCTGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCT
* *
4780474 CCGGCGATGGTGCCCCGACAAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGTATG
648 CCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
**** * *
4780534 TGCTATTGCAACCCTCGGCCCGGTCCGATCTTAGACTGGG-ATGAACTCCGTATGC
1 TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGC
4780589 TTAGACTAGG
Statistics
Matches: 1368, Mismatches: 95, Indels: 39
0.91 0.06 0.03
Matches are distributed among these distances:
707 39 0.03
708 389 0.28
709 101 0.07
710 122 0.09
711 1 0.00
712 10 0.01
713 53 0.04
716 116 0.08
717 20 0.01
718 133 0.10
719 180 0.13
720 204 0.15
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (707 bp):
TGCTGCCACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAAAGAGCGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATGGGTGGTAGGAGGGTTTAGGCACATCTTCATATTACTGCATGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAAGATGACTCGTTT
TCTTTTTTCATGATTTTCAAAACTTTTTTCGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGTGT
TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAGGTGTCCCCATTCCAGACACTTTA
ATGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCAC
ACCCCCCGGCCCCCCCGATCGCTGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCG
GCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
Found at i:4780591 original size:25 final size:26
Alignment explanation
Indices: 4780563--4780614 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4780553 CCGGTCCGAT
*
4780563 CTTAGACT-GGGATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4780588 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4780614 C
1 C
4780615 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.27, C:0.21, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4783985 original size:26 final size:26
Alignment explanation
Indices: 4783956--4784008 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
4783946 CCGGTCCAAT
4783956 CTTAGACTG-GTAATGAACTCCATATG
1 CTTAGACTGAG-AATGAACTCCATATG
*
4783982 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCATATG
4784008 C
1 C
4784009 CTAGTCAACC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCATATG
Found at i:4786595 original size:26 final size:26
Alignment explanation
Indices: 4786559--4786611 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4786549 CTGGTTCGAT
4786559 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4786585 CTTAGACTGGGAATGAATTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4786611 C
1 C
4786612 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4787473 original size:25 final size:25
Alignment explanation
Indices: 4787437--4787486 Score: 82
Period size: 25 Copynumber: 2.0 Consensus size: 25
4787427 CGGTCTGATC
*
4787437 TTAGACTAGGAATGATCTCCGTATG
1 TTAGACTAGGAATGAACTCCGTATG
*
4787462 TTAGACTGGGAATGAACTCCGTATG
1 TTAGACTAGGAATGAACTCCGTATG
4787487 CCTAAGTCAA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.28, C:0.16, G:0.26, T:0.30
Consensus pattern (25 bp):
TTAGACTAGGAATGAACTCCGTATG
Found at i:4789366 original size:26 final size:26
Alignment explanation
Indices: 4789330--4789382 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4789320 TCGATTCGAT
* *
4789330 CTTAGACTGGGACTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGAATG
4789356 CTTAGACTGGGAATGAACTCCGAATG
1 CTTAGACTGGGAATGAACTCCGAATG
4789382 C
1 C
4789383 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGAATG
Found at i:4790139 original size:26 final size:26
Alignment explanation
Indices: 4790103--4790155 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4790093 CTGGTCCGAT
*
4790103 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4790129 CTTAGACTGGGAATGAATTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4790155 C
1 C
4790156 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4791756 original size:862 final size:857
Alignment explanation
Indices: 4790095--4792044 Score: 3114
Period size: 862 Copynumber: 2.3 Consensus size: 857
4790085 CCCCCGGTCT
* ** * * * *
4790095 GGTCCGATCTTAGACTGGGAATGAACTCCTTATGCTTAGACTGGGAATGAATTCCGTATGCCTAA
1 GGTCCAATCTTAGACTGGGAATGAACTCCGCATGTTTAGACTGGGAATGAACTCCGTTTACCTAA
* * * * ** * * * *
4790160 GTCAACTCACGAAACGAGCGTGCGGGCGCTTAGCCTGCCAGAGGGGTGGGATG-TGCAAGACGAG
66 GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAAGTGATGCT-TAAGCCGGG
* ** * ** *** * * *
4790224 GATCGGTCGCATCCCCCTCTGCGTGCTG-CAGATCCTGCTGCCGGT-TCGGTCCGATCTTAGATT
130 GATTGGTCGGGTCCCCATCTATGTGCTGTC-GATCCCATTGTCGGTCT-GGCCCGATCTTAGACT
* *
4790287 GGGAATGAACTCCGT-TCGCCTAAGCCAACCAACG-AA-A-CGAGCGGGTGGGCGGGCACTACGC
193 GGGAATGAACTCCGTAT-GCCTAAGCCAACCGACGAAAGAGCGAGCGGGTGGGCGGCCACTACGC
* *
4790348 CGGCCAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
257 CGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* *
4790413 TCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
322 TCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCA
* **
4790478 TCACGTGAAGTTTAGTGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTTTG
387 TCACGTGAAGTTTAGTGGCAAGACGACTCGGTTTCTATTTTTCATGATTTTTGAAACTTTTTACG
* * * *
4790543 GTTCGACATTTTTTAAAATTTTTTTGAAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTA
452 GCTCGACATTTTTTAAAATTCTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTA
*
4790608 GTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAACTCGAAGTGTACAAGATTTTGTGACCA
517 GTATTTTTGTTGGCATGCACAAAAAAATTAAGCTAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
4790673 TTTGAAAAAAGTGTCCCCATTTCAAACAGTTTAATGGCTACTAGTAGCAAACCTGTAAAATCTCA
582 TTTGAAAAAAGTGTCCCCATTTCAAACACTTTAACGGCTACTAGTAGCAAACCTGTAAAATCTCA
4790738 AATGCTCTTTAAGGGGGTTGTGAGTTCTCGAGGTTTGATGAGGATAAGGGGCCAATATAAGGACC
647 AATGCTCTTTAAGGGGGTTGTGAGTTCTCGAGGTTTGATGAGGATAAGGGGCCAATATAAGGACC
4790803 AAGTACCAGCACCCATCACACATCATGTGTGCACACCCCCCCGATCGTCGGAACCCCAATGCGGC
712 AAGTACCAGCACCCATCACACATCATGTGTGCACACCCCCCCGATCGTCGGAACCCCAATGCGGC
4790868 CGGTCAAGTTCTCCGATAATGCTCCGACGATGGTGCCCCGACATGCCCGCACCCAGCATGTGCTG
777 CGGTCAAGTTCTCCGATAATGCTCCGACGATGGTGCCCCGACATGCCCGCACCCAGCATGTGCTG
4790933 TCGCAACCCTTTGTCC
842 TCGCAACCCTTTGTCC
4790949 GGTCCAATCTTAGACTGGGAATGAACTCCGCATGTTTAGACTGGGAATGAACTCCGTTTACCTAA
1 GGTCCAATCTTAGACTGGGAATGAACTCCGCATGTTTAGACTGGGAATGAACTCCGTTTACCTAA
4791014 GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAAGTGATGCTTAAGCCGGGG
66 GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAAGTGATGCTTAAGCCGGGG
4791079 ATTGGTCGGGTCCCCATCTATGTGCTGTCGATCCCATTGTCGGTCTGGCCCGATCTTAGACTGGG
131 ATTGGTCGGGTCCCCATCTATGTGCTGTCGATCCCATTGTCGGTCTGGCCCGATCTTAGACTGGG
4791144 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCAGGCGGGTGGGCGGCCACTACG
196 AATGAACTCCGTATGCCTAAGCCAACCGACGAAA-GAGC-G--A-GCGGGTGGGCGGCCACTACG
* * * *
4791209 CCGACCAGAGATATGGGATGCGCAAGTTC-TGGATCGATAGGGTGGTAGG-GGGTTTGGGCACAT
256 CCGACCAGAGAGACGGGATGCGCAAG-CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
*
4791272 CTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGC
320 CTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* *
4791337 CATCATGTGAAGTTTCA-TGGCAGGACGACTCGGTTTCTATTTTTCATGATTTTTGAAACTTTTT
385 CATCACGTGAAGTTT-AGTGGCAAGACGACTCGGTTTCTATTTTTCATGATTTTTGAAACTTTTT
** * *
4791401 ACGGCTCGGGATTTTTTTAAAATTCTTTCGGAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGAT
449 ACGGCTCGACA-TTTTTTAAAATTCTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* *
4791466 CCTTA-TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTGGAAGTGTACAAGATTTTG
513 CC-TAGTATTTTTGTTGGCATGCACAAAAAAATTAAGCT-AAAACTCGAAGTGTACAAGATTTTG
* * * *
4791530 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGTTATTGGTAGCAAACCTGTAAA
576 TGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAACGGCTACTAGTAGCAAACCTGTAAA
4791595 ATCTCAAATGCTCTTTAAGGGGG-TGTGAGTTCTCGAGGTTTGATGAGGATAAGGGGCCAATATA
641 ATCTCAAATGCTCTTTAAGGGGGTTGTGAGTTCTCGAGGTTTGATGAGGATAAGGGGCCAATATA
4791659 AGGACCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCCCCCGATCGTCGGAACCCCAA
706 AGGACCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCCCCCGATCGTCGGAACCCCAA
4791724 TGCGGCCGGTCAAGTTCTCCGATAATGCTCCGACGATGGTGCCCCGACATGCCCGCACCCAGCAT
771 TGCGGCCGGTCAAGTTCTCCGATAATGCTCCGACGATGGTGCCCCGACATGCCCGCACCCAGCAT
4791789 GTGCTGTCGCAACCCTTTGTCC
836 GTGCTGTCGCAACCCTTTGTCC
4791811 GGTCCAATCTTAGACTGGGAATGAACTCCGCATGTTTAGACTGGGAATGAACTCCGTTTACCTAA
1 GGTCCAATCTTAGACTGGGAATGAACTCCGCATGTTTAGACTGGGAATGAACTCCGTTTACCTAA
4791876 GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAAGTGATGCTTAAGCCGGGG
66 GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAAGTGATGCTTAAGCCGGGG
*
4791941 ATTGGTCGGGTCCCCATCTATGTGCTGTCGATCCCATTGTCGGTCCGGCCCGATCTTAGACTGGG
131 ATTGGTCGGGTCCCCATCTATGTGCTGTCGATCCCATTGTCGGTCTGGCCCGATCTTAGACTGGG
4792006 AATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGC
196 AATGAACTCCGTATGCCTAAGCCAACCGACGAAA-GAGC
4792045 AGACGAGTGA
Statistics
Matches: 1015, Mismatches: 64, Indels: 26
0.92 0.06 0.02
Matches are distributed among these distances:
854 188 0.19
855 6 0.01
857 1 0.00
858 1 0.00
859 1 0.00
861 141 0.14
862 568 0.56
863 109 0.11
ACGTcount: A:0.24, C:0.24, G:0.26, T:0.26
Consensus pattern (857 bp):
GGTCCAATCTTAGACTGGGAATGAACTCCGCATGTTTAGACTGGGAATGAACTCCGTTTACCTAA
GTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGAAGTGATGCTTAAGCCGGGG
ATTGGTCGGGTCCCCATCTATGTGCTGTCGATCCCATTGTCGGTCTGGCCCGATCTTAGACTGGG
AATGAACTCCGTATGCCTAAGCCAACCGACGAAAGAGCGAGCGGGTGGGCGGCCACTACGCCGAC
CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCATCAC
GTGAAGTTTAGTGGCAAGACGACTCGGTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGCTC
GACATTTTTTAAAATTCTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTAGTAT
TTTTGTTGGCATGCACAAAAAAATTAAGCTAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
AAAAAAGTGTCCCCATTTCAAACACTTTAACGGCTACTAGTAGCAAACCTGTAAAATCTCAAATG
CTCTTTAAGGGGGTTGTGAGTTCTCGAGGTTTGATGAGGATAAGGGGCCAATATAAGGACCAAGT
ACCAGCACCCATCACACATCATGTGTGCACACCCCCCCGATCGTCGGAACCCCAATGCGGCCGGT
CAAGTTCTCCGATAATGCTCCGACGATGGTGCCCCGACATGCCCGCACCCAGCATGTGCTGTCGC
AACCCTTTGTCC
Found at i:4793624 original size:26 final size:26
Alignment explanation
Indices: 4793574--4793626 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4793564 CAGGTCCGAT
* **
4793574 CTTAGACTGGGAATTAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4793600 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4793626 C
1 C
4793627 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.17, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4794520 original size:26 final size:26
Alignment explanation
Indices: 4794469--4794521 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4794459 TCGATCCGAT
*
4794469 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4794495 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4794521 C
1 C
4794522 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4795308 original size:899 final size:896
Alignment explanation
Indices: 4793504--4797181 Score: 4668
Period size: 895 Copynumber: 4.1 Consensus size: 896
4793494 NNACCCCGAC
* * * * *
4793504 GAAGAAAAATGCGGCACCAGCACATGCTCGACCCCAGCATGTGCTGCCGAAACCCTTGG-TCAGG
1 GAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTTC-GA
* ***
4793568 TCCGATCTTAGACTGGGAATTAACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
65 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * ** * * *
4793633 CAACCCACAAAACGAGCATGCAGGCATTCAGCTGGCCAAAGGGGCGGGATGCGCAAGCCGGGGAT
130 CAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
* * ** * ** *
4793698 CGGTCGGGTCCCCCTCTGCGTGTTGCCAATCTTGCCACTGCAACCCTCGGTCTGGTCCAATCTTA
195 CGATCGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTA
*
4793763 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACT
260 GACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACT
* *
4793828 ACGCCGACCAGAGAGACGGGATGCGCAA-GC-TGTTGATCGATTGGGTGGCAGGTGGGTTTAGGC
325 ACGCCGGCCAGAGAGACGGGATGCGCAAGGCATG--GATCGATAGGGTGGCAGGTGGGTTTAGGC
* *
4793891 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGCAAATTCATATAATGGTCCCTT
388 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT
* *
4793956 AAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCACGATTTTTGAAACTT
453 AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTT
* * * ** *
4794021 TTTACGGTTCACAATTTTTTAAAATTTTTTCAGAAGG-TTTTTTTCCTTCAAACTTGGTAGACGT
518 TTTACGGTTCAGAATTTTTT-AAATTTTTTCGGAAGGAGTTTTGGCC-CCAAACTTGGTAGACGT
*
4794085 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGATGTGTACAAGATTT
581 GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
4794150 TGTGACAATTTGAAAAAAGTGTCCAC-ATTTCAGACACTTTAAAGGCTACTGACAGCAAACCTGT
646 TGTGACAATTTGAAAAAAGTGTCC-CTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * *
4794214 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTCATGATGGATTGGGGGCCAAT
710 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
* *
4794279 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACAC-CCCCCCGACCCCCCGATCGTC
775 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTC
* * *
4794343 GGAACC-CAATGCCACCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGA
840 GGAACCTCAATGCCACCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCGGA
** * * *
4794399 GGCTGAAAAATACGGCACCAACACATGC-CGAGCCCAGCATGTGCTACCGTAACCCTCGGTTCGA
1 -GAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTTCGA
*
4794463 TCCGATCTTAGACTGGGAATGAACTCTATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
65 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* *
4794528 CAACCCACGAAACGAGCGTGCAGCCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
130 CAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
* * * *
4794593 CGATCAGGG-CCCCTTCTGCGTGCTGCCAATCCTGCTGCCGCAACACTCGGTCCAATCCGATCTT
195 CGATC-GGGTCCCCCTCTGCGTGCTGCCAATCTTGCTGCCGCAACCCTCGGTCCAGTCCGATCTT
*
4794657 AGAGTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGG
259 AGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGC-GG-A--CGGGCGGGCGG
* * **
4794722 GCACTACGCCAGCCAAAGAGACGGGATGCGCAAGGCATGGATCGATAGGGTGGTTGGTGGGTTTA
320 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGGCATGGATCGATAGGGTGGCAGGTGGGTTTA
* *
4794787 GGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGGTCC
385 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
4794852 CTTAAGCCTTCACGTGAAGTTTGATGGAAAGACGACTCGTTTTCTATTTTT-AGGATTTTTGAAA
450 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * *
4794916 CTTTTTGCGCTTCGGGATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
515 CTTTTTACGGTTCAGAATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * * * * *
4794981 TGATCCTTGTATTTTTGTTGGCATGCAGAAAACAATTTAGCCAAAAACTCAAAATGTACAAGATT
580 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* *
4795046 TTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCATACCTGT
645 TTGTGACAATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
4795111 AAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTCCAGGTTTGATGAGGGATAGGGGGCCAAT
710 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAAT
* *
4795176 ATAAGCGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGGCCCCCGATCG-C
775 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTC
* * ** * *
4795240 TGAAACCTCAATGTCGTCGGTCAGGTTCTCTGACGATGCTTCAACGATGGTGCGCCGGA
840 -GGAACCTCAATGCCACCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGC-CCGGA
** * * *
4795299 GAAGAAAAATGTGGCACCAGCACAAGCTCGAGCCCAACATGTGCTGTCGCAACCCTCAGTCCGAT
1 GAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTC-G---G-T
* * * *
4795364 CCGATCCGATCATAGACTGGGAATGAACCCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
61 TCGATCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
4795429 ACGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGTCCAGAGGGGTGGGATGCGCAAGCCGA
126 AAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGA
* ** * * * *
4795494 GCATCGGCCGGGT--CAC-C--C-T-CTG-C-A---TGCTGCCGTAACCCTCGATCCAGTCTGAT
191 GGATCGATCGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTGCCGCAACCCTCGGTCCAGTCCGAT
* *
4795547 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGA----TGGGCGGG
256 CTTAGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGG
* * * * *
4795608 CACTACGTCGGCCAGAGAGACGGGATGCG-AAAGCTGTGGATCGATGGGGTGGCAAGTGGGTTTA
321 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGGC-ATGGATCGATAGGGTGGCAGGTGGGTTTA
* ** *
4795672 GTCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCATGTAAATTCATACAATGGTCC
385 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * *
4795737 CTTAAGCCTTTACATGAAGTTTCATGGCAAGATGACTCGGTTTCTATTTTTCACAATTTTTGAAA
450 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
*
4795802 CTTTTTACGGTTCGAGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
515 CTTTTTACGGTTC-AGAATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * * * * * * *
4795867 ATGATCCTTGTATTTTTATTGGCATGCATAGAACAATACAGCTAAAAACTCTAAGGGTAC-TG--
579 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
** * * * * ** *
4795929 TCAG-CA-AACTTGTAAAATCTCAA-TGGCTACT-TTTGTTGACACTTTAATGGCTACTGTCAGC
644 TTTGTGACAATTTG-AAAA----AAGTGTC-CCTATTT-CAGACACTTTAATGGCTACTGGCAGC
* * * *
4795990 AAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTATGAGTTCTCAAGGTTTGATGAGGGATAAG
702 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGG
* * * *
4796055 GAGCCAATATAAGGGCTAAGTACCAGTACCCATCACACATCATGTGCGCACACACCCCCCTGGCC
767 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCC-GG-C
* * **
4796120 CCCCCGATCGTCGGAACCTCAATGCCACCGGTCAGGTTCTCTGGCAATGCTCCGGTGATGGTGCC
828 CCCCCGATCGTCGGAACCTCAATGCCACCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTG-C
* *
4796185 CCAGT
892 CCGGA
* * * * *
4796190 GAAGAAAAATTCGGCACCAGTAAATGCTCGAGCCCAACATGTGCTGCTGCAACCCTCGG-TCTGA
1 GAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTTC-GA
* *
4796254 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGAAATGAACTTCGTATGCCTAAGT
65 TCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * * *
4796319 CAACCCACGAAACAAGCGTGCGGGTGCTCAGTCTGCCAGAGGGGCAGGATGCGCAAGCCAAGGAT
130 CAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGAT
* * * * * *
4796384 CGATCGGGTCCCCCTCTGCGTGCTGCCGATCTTGATGCCACAACCCTTGGT-CTGGCCTGATCTT
195 CGATCGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTGCCGCAACCCTCGGTCCAGTCC-GATCTT
4796448 AGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGG
259 AGACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGC-GG-A--CGGGCGGGCGG
* * * *
4796513 GCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGCA--GATCGATAGGGTTGTAGGTGGGTT
320 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAG--GCATGGATCGATAGGGTGGCAGGTGGGTT
*
4796576 TAGGCACATCTTCATATTTTTCTGCATGCCAATCCCATTTTTATGGCTTGTAAATTCATACAATG
383 TAGGCACATCTTCATA--TTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
4796641 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
446 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
*
4796706 GAAACTTTTTAGGGTTCAGAATTTTTTAAATTTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGT
511 GAAACTTTTTACGGTTCAGAATTTTTTAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* *
4796770 AGACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACA
575 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
4796835 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAA
640 AGATTTTGTGACAATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
4796900 CCTGTAAAATCTCAAATGCTCTTTAAGGGCGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
705 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGG
* *
4796965 CCAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACTCCCCCCGACCCCCC
770 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCG-GCCCCC
* * * *
4797030 CGATCATCGGAACCTCAATGCCGCC-G--A-----TC--AAG-TTCTCCGACGATGGTGCCCTGG
832 CGATCGTCGGAACCTCAATGCCACCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCC-GG
*
4797084 T
896 A
* * * * * * *
4797085 GAAGAAAAATATGACACCAGCACATGCCCGAGCCTAGAATGTGCTGCCGCAACCCTCGGTCCGGT
1 GAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTTCGAT
* *
4797150 CCGATCTCAGACTGGGAATGAACTCCTTATGC
66 CCGATCTTAGACTGGGAATGAACTCCATATGC
4797182 CTAAGTCAAC
Statistics
Matches: 2400, Mismatches: 305, Indels: 155
0.84 0.11 0.05
Matches are distributed among these distances:
882 4 0.00
883 5 0.00
884 6 0.00
885 163 0.07
886 154 0.06
887 227 0.09
888 2 0.00
889 11 0.00
890 3 0.00
891 106 0.04
892 5 0.00
893 75 0.03
894 4 0.00
895 338 0.14
896 33 0.01
897 254 0.11
898 129 0.05
899 234 0.10
900 33 0.01
901 3 0.00
902 1 0.00
903 2 0.00
904 4 0.00
905 130 0.05
906 99 0.04
907 229 0.10
908 133 0.06
909 2 0.00
910 2 0.00
911 5 0.00
912 4 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (896 bp):
GAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTTCGAT
CCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
AACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATC
GATCGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAG
ACTGGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGGCACTA
CGCCGGCCAGAGAGACGGGATGCGCAAGGCATGGATCGATAGGGTGGCAGGTGGGTTTAGGCACA
TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT
ACGGTTCAGAATTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
CAATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACC
TCAATGCCACCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCGGA
Found at i:4795412 original size:26 final size:26
Alignment explanation
Indices: 4795376--4795426 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
4795366 GATCCGATCA
4795376 TAGACTGGGAATGAACCCCGTATGCT
1 TAGACTGGGAATGAACCCCGTATGCT
*
4795402 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACCCCGTATGC
4795427 CTACGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.22, G:0.27, T:0.24
Consensus pattern (26 bp):
TAGACTGGGAATGAACCCCGTATGCT
Found at i:4797518 original size:158 final size:162
Alignment explanation
Indices: 4797236--4797555 Score: 398
Period size: 158 Copynumber: 2.0 Consensus size: 162
4797226 GAGGGGCAGC
* * * * *
4797236 CGGGGATCGACCGGGTCCCCCTTTGCGTGCTGTCGATCCTGCTGCCACAACCCTCAGTTTGGTTC
1 CGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTACCACAACCCTCAGTCTGGTCC
* * * * * *
4797301 GATGTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GCT
66 AATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCCACAAAACGAGCGGGCGGGCGGCA
* *
4797365 C-A-GCCGGCCAGAGGGGCGGGATGCGCAAGT
131 CTATGCCGGCCAGAGAGACGGGATGCGCAAGT
** * * *
4797395 CGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGCTCCTACTACCGCAA-CCTCGGTCTGGTCC
1 CGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTACCACAACCCTCAGTCTGGTCC
* * *
4797459 AATCTTAGACTT-GGAATGAACTCTGTATGCCTAAGCCAACCGATAAAACGAGCGGGCGGGCGGG
66 AATCTTAGA-TTGGGAATGAACTCCGTATGCCTAAGCCAACCCACAAAACGAGCGGGCGGGC-GG
4797523 CACTATGCCGGCCAGAGAGACGGGATGCGCAAG
129 CACTATGCCGGCCAGAGAGACGGGATGCGCAAG
4797556 CCTGTGGATC
Statistics
Matches: 135, Mismatches: 21, Indels: 7
0.83 0.13 0.04
Matches are distributed among these distances:
158 61 0.45
159 45 0.33
160 3 0.02
161 1 0.01
162 25 0.19
ACGTcount: A:0.20, C:0.29, G:0.32, T:0.19
Consensus pattern (162 bp):
CGGGGATCGACCGGGTCCCCCTCTGCGTGCTGTCGATCCTACTACCACAACCCTCAGTCTGGTCC
AATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCCACAAAACGAGCGGGCGGGCGGCA
CTATGCCGGCCAGAGAGACGGGATGCGCAAGT
Found at i:4798196 original size:26 final size:26
Alignment explanation
Indices: 4798160--4798212 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4798150 CTAGTCCGAT
* *
4798160 CTTATACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4798186 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4798212 C
1 C
4798213 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.21, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4799096 original size:26 final size:26
Alignment explanation
Indices: 4799060--4799109 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
4799050 ATCCGGTCCT
*
4799060 AGACTGGGAATGGACTTCGTATGCTG
1 AGACTGGGAATGAACTTCGTATGCTG
4799086 AGACTGGGAATGAACTTCGTATGC
1 AGACTGGGAATGAACTTCGTATGC
4799110 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.16, G:0.32, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTTCGTATGCTG
Found at i:4799109 original size:897 final size:900
Alignment explanation
Indices: 4797305--4800898 Score: 4542
Period size: 897 Copynumber: 4.0 Consensus size: 900
4797295 TGGTTCGATG
* * *
4797305 TTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGCGGGCGCTCAGCC
* *
4797370 GGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGC-TCC
66 GGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTG-CCCATCC
* * * *
4797434 TACTACCGCAA-CCTCGGTCTGGTCCAATCTTAGACTTGGAATGAACTCTGTATGCCTAAGCCAA
130 TACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
4797498 CCGA-TAAA--A-C-G-AGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGC
195 CCAACGAAACGAGCGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
4797557 CTGTGGATCGATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAT
260 C-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* * * *
4797622 TTTTATGGCTTGTGAATTCATGCAATGGTCCCCTAAGCCTTCACGTGACGTTTCATGGCAAGACG
324 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* *
4797687 ACTCGTTTTCTATTTTTCATGA---TTG-AACTTTTTGC-GTTC-AGGA-TTTTTAAAA-TTTTT
389 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGA-AATTTTTTAAAATTTTTT
* * *
4797744 C-GAAGGAGTTT--CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATGCACAAAAC
453 CGGAAGGAGTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * *
4797806 AATCCAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTTGCAAAAAGTGT-CCCATTTTA
518 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAA
* *
4797870 GACACTTTACT-GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
583 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGT
* *
4797934 TCTAGAGGTTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
648 TCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATC
* * *
4797999 ATGTACGCACAC-CCCCTCGGCCCCCCGATCGTCGGAACCCTAATGCCACCGGTCAGGTTCTCCA
713 ATGT-CGCACACACCCC-CGGCCCCCCGATCGTCCGAACCCCAATGCCATCGGTCAGGTTCTCCA
* * * * * *
4798063 GCGATGCTCGGGCGATGGTGCACCGGCAAAAAAAAATGTGGCACCAGCGCATGCCCGAGCCCAGC
776 GCGATGCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGC
* * * * * *
4798128 ATGTGCTGCCGCCACCCTCGGT-CTAGTCCGATCTTATACTAGGAATGAACTCTGTATGC
841 ATGTGCTGCTGCAACCCTCAGTCCGAGTCCGATCTTAGACTGGGAATGAACTCTGTATGC
* * * * * *
4798187 TTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCGTACGGGCGTTCAACT
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGCGGGCGCTCAGCC
* * **
4798252 GGCCATAGGGGCGGGATGCACAAGTCGGGGATCAACCGGGTCCCCCTCTGCGTGCTGCCCATCCT
66 GGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTGCCCATCCT
* * * * * * * * *
4798317 ACTGCCACAACCCTTAGTTTGATGCGATGTTAGACTAGGAATGAACTCCGTACGCCTAAGCCACC
131 ACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * *
4798382 CGACGAAACGAGC-GC-GCGGGCAGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGTC
196 CAACGAAACGAGCGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
*
4798445 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAAGCCATTT
261 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* *
4798510 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGACAAGACGAC
326 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
4798575 TCATTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTCGAAATTTTTTAAAATTTTTTTGG
391 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAAATTTTTTAAAATTTTTTCGG
*
4798640 AAGGAGTTTTGGCCCCAAACTTGGTAGTCATGATCCTTGT-TTTTTGTTGGCATGCACAAAAAAA
456 AAGGAG-TTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
4798704 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGA
520 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGA
4798769 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTC
585 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTC
* * *
4798834 TCAG-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGGACCCATCGCACATCA
650 T-AGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCA
* * * *
4798898 TGTCCGCACA-ACCCCCGGCCCCCCGATTG-CCGAAGCCTCAATGCCGTCGGTCAGGTTCTCCGG
714 TGT-CGCACACACCCCCGGCCCCCCGATCGTCCGAA-CCCCAATGCCATCGGTCAGGTTCTCCAG
* * * * *
4798961 TGATGCTCCGACGATGGTGCCCCTGCAAAGAAAAATGCAGCACCAGCACATGCCCAAGCCTAGCA
777 CGATGCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCA
* * * *
4799026 TGTGCTGCTGCAACCCTCAGTCCCA-TCCGGTCCTAGACTGGGAATGGACT-TCGTATGC
842 TGTGCTGCTGCAACCCTCAGTCCGAGTCCGATCTTAGACTGGGAATGAACTCT-GTATGC
* * * * *
4799084 TGAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACAAGCATGCAGGCGTTCAGCC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGCGGGCGCTCAGCC
* * * * ** * ** *
4799149 AGCTAGAGGGGTGGGATGCGCAAGGCGGGGATTGGTCGGGTCCCCTTCTGCGTGCTATCGATCCT
66 GGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTGCCCATCCT
* *
4799214 ACTGCCACAACCCTC-GATCTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 ACTACCACAACCCTCAG-TCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
4799278 CCAATGAAACGAGCAGGCGGGCGGGCGGGCGGGCATTTCGCCGGCCAGAGAGACGGGATGCGGAA
195 CCAACGAAACGAGC-GGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
4799343 GCCGTGGATCAATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATGTCAATGCCA
258 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* *
4799408 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAGGAC
323 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
4799473 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGATTTGGGATTTTTTTAAAATTTTT
388 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACG-GTTCGAAATTTTTTAAAATTTTT
* * *
4799538 TCGGATGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
452 TCGGAAGG-AGTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
4799603 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTTTCCCCATTT
516 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
4799668 AAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAA-AGCTCTTTAAGGGGGTGTA
581 AAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATA-CTCTTTAAGGGGGTGTG
* *
4799732 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACAT
645 AGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACAC
* * * *
4799797 ATCATGTGCGCACAGCCCCCCCGGCCCCCTGATCGTCGGAACCCCAATGCCATCGGTCAAGTTCT
710 ATCATGT-CGCACA-CACCCCCGGCCCCCCGATCGTCCGAACCCCAATGCCATCGGTCAGGTTCT
* * * *
4799862 CCAGCGATGCTCAGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCAAGCCC
773 CCAGCGATGCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCC
* * * *
4799927 AGCATGTGCTGTTGCAACCCTCAGTCTG-GTCTGATTTTAGACTGGGAATGAACTCTGTATGC
838 AGCATGTGCTGCTGCAACCCTCAGTCCGAGTCCGATCTTAGACTGGGAATGAACTCTGTATGC
* ** *
4799989 TTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCATGTGGGCGCTCAGCC
1 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGCGGGCGCTCAGCC
** * * * * *
4800054 GGTTAGAGGGGCGGGATGCGCAAGTCGAGGATCAGTCGGGTCCCCCTATGTGTGCTGTCGATCCT
66 GGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTGCCCATCCT
* ** * * ** * *
4800119 GCTACCGTAACACTCAATCTGGTCTGAT-TT----TA-GACT--ACTCCGTATGCCTAAGCCAAG
131 ACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
4800176 TAACGAAATGAGCGGGCGTGCGGGCGGGCGGGCACTACGTCGGCCAAAGAGACGTGATGCGTAAG
196 CAACGAAACGAGC-GGCG-GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
4800241 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC-ATGCCAT
259 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* *
4800305 TTTTATGGCTTGTAAATTCATACAATGGTCCTTTATGCCTTCACGTGAAGTTTCATGGCAAGACG
324 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* **
4800370 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT-AAATTTTTTC
389 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAAATTTTTTAAAATTTTTTC
* * * **
4800434 GGAATGAGTTTGG--CC--A--T-GTAGA-GTGATCCTTGTATTTTTGCTCACATGCACAAAAAA
454 GGAAGGAGTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
4800491 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTT-TGACCAATTTG-AAAAAGTGGTCCCCCATTT
519 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC-ATTTGAAAAAAGT-GT-CCCCATTT
* * * * *
4800554 CAGACACTTTAATGGCTACTAGCA-CAAACCTATAAAATCTCCAGATGCTCTTTAAGGGGG-GTT
581 AAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT-CAAATACTCTTTAAGGGGGTG-T
* *
4800617 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC-A-ATAA-GGCCAAGTA-CAGCA-CTATTCAC
644 GAGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-TCAC
* * *
4800677 ACATCATGTCGC-CACACACCCCAGCAACCCCCGATCGT-CGAAACCCCAATGCCGT-AGTCAGG
708 ACATCATGTCGCACACAC-CCCCGGC--CCCCCGATCGTCCG-AACCCCAATGCCATCGGTCAGG
* * * * * **
4800739 TTC-CC-GTGATGCTCC-GTGATGGTGCCCCCCGGCGAAGAAACATACGGCACCAGCACATGCTT
769 TTCTCCAGCGATGCTCCGGCGATGGTG--CCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCC
* * *
4800801 GAGCCCAGCATGTGCTGC--CACACACCTCA-TCCGAGTCTGATCTTAGATTGGGAATGAACT-T
832 AAGCCCAGCATGTGCTGCTGCA-AC-CCTCAGTCCGAGTCCGATCTTAGACTGGGAATGAACTCT
*
4800862 CATATGC
895 -GTATGC
4800869 TTAGACTGGGAATG-ACTCCGTATGCCTAAG
1 TTAGACTGGGAATGAACTCCGTATGCCTAAG
4800899 CCATCTGACG
Statistics
Matches: 2375, Mismatches: 277, Indels: 123
0.86 0.10 0.04
Matches are distributed among these distances:
878 10 0.00
879 32 0.01
880 103 0.04
881 16 0.01
882 162 0.07
883 55 0.02
884 18 0.01
885 87 0.04
886 223 0.09
887 46 0.02
889 4 0.00
890 9 0.00
891 7 0.00
892 10 0.00
893 11 0.00
894 21 0.01
895 13 0.01
896 186 0.08
897 476 0.20
898 127 0.05
899 7 0.00
900 1 0.00
901 198 0.08
902 58 0.02
903 216 0.09
904 2 0.00
905 272 0.11
906 5 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAGCATGCGGGCGCTCAGCC
GGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTGCCCATCCT
ACTACCACAACCCTCAGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
CAACGAAACGAGCGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAAATTTTTTAAAATTTTTTCGG
AAGGAGTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCT
AGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATG
TCGCACACACCCCCGGCCCCCCGATCGTCCGAACCCCAATGCCATCGGTCAGGTTCTCCAGCGAT
GCTCCGGCGATGGTGCCCCGGCAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTG
CTGCTGCAACCCTCAGTCCGAGTCCGATCTTAGACTGGGAATGAACTCTGTATGC
Found at i:4799992 original size:26 final size:26
Alignment explanation
Indices: 4799963--4800014 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
4799953 TGGTCTGATT
*
4799963 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
*
4799989 TTAGATTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
4800015 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.15, G:0.27, T:0.31
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:4802477 original size:26 final size:26
Alignment explanation
Indices: 4802448--4802500 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4802438 CCGGTCTGAT
4802448 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4802474 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4802500 C
1 C
4802501 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4803379 original size:26 final size:26
Alignment explanation
Indices: 4803343--4803395 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4803333 CTGGTCTGAT
4803343 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4803369 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4803395 C
1 C
4803396 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4804278 original size:26 final size:26
Alignment explanation
Indices: 4804242--4804294 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
4804232 CCGGTCCAAT
4804242 CTTAGACTGGGAATGAACTAC-GTATG
1 CTTAGACTGGGAATGAACT-CTGTATG
4804268 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
4804294 C
1 C
4804295 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 1 0.04
26 25 0.96
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:4805183 original size:26 final size:26
Alignment explanation
Indices: 4805147--4805199 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4805137 CCGGTCCGAT
4805147 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4805173 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4805199 C
1 C
4805200 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4805638 original size:899 final size:898
Alignment explanation
Indices: 4800868--4811299 Score: 13087
Period size: 891 Copynumber: 11.7 Consensus size: 898
4800858 ACTTCATATG
* * *
4800868 CTTAGACTGGGAATG-ACTCCGTATGCCTAAGCCATCTGACGAAAACGAGCGGGCGGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AAACGAGCGGCCGGGCGGGCGG
* *
4800932 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCCAGTAAGGATTGCGTAGGTGGG
65 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA-T-AGG-GTG-GTAGGTGGG
* * * * * *
4800997 TTTTGGCACCTCTTCCGTATTTCTGCATGCCAATGCCA-TTTTAGAGGCTTGTAAATTCATGCAA
126 TTTAGGCACATCTT-CATATTTCTGCGTGCCAATGCCATTTTTA-TGGCTTGTAAATTCATACAA
** * *
4801061 TGGTCCCTTAAAACTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTT
189 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
** *
4801126 TCAAAACTTTTT-ACGGTTCGGGACTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
254 TTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * * *
4801190 GGTAGACATCATCCTTGTATTTTTGTTGGCATGCATAAAGAAATTTAGCTAAAAACTCGAAGTGT
318 GGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
4801255 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
383 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
4801320 AAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGG
448 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * *
4801385 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGAACAGCATGCGCGCACACCCCCCGGCCCCC
513 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCC
* * * * * * * *
4801450 CCGATCTCTGGATCCCCAATGTCGTCGGTCAGGTTTTTCAGTGATGCT-TGAGCGATGGTGCCCC
577 CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGA-CGATGGTGCCCC
* * * **
4801514 GACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCATAA-CC-C--T-C
641 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCC
*
4801574 -G---G-TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTTCGTATGCCTAA
706 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * **
4801618 GTCAACACACGAAACAAGCGTGCGGGTGCTCAGCTGGCCAGAGGGGCGGGAAACGCAAGCCGGGG
771 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * * ** * *
4801683 ATCGATCGGGTCCCCCTCTGCGTGTTGTCGATCTTGCTGCTGCAACCCTCGATCTGATCCAAT
836 ATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGTCTAAT
* * * * *
4801746 CTTAGACTAGGAAAGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCAGGCAGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGCGGG
* * *
4801811 CACTACGCCGGCAAGAGAGACGGGATACGCAAGCCGTGGATCGGTAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * *
4801876 GCACATCTTCATATTTCTGCATGCCAATGCCA-TTTTAGAGGCTTGTAAATTCATGCAATGGTCC
131 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA-TGGCTTGTAAATTCATACAATGGTCC
* **
4801940 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
195 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
*
4802005 CTTTTT-ATGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
260 CTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
4802069 CATGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGA
324 CATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
4802134 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAATGGCAGCAAACTT
389 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
4802199 GTAAAATCTCAAATACTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
454 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * *
4802264 ATATAGGGGCCAAGTACCAGCACCCATTGCACATCATATGCGCATA-CCCCCGGCCCCCCCGATC
519 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATC
** * * * * * *
4802328 ATCGAAATCCCAATGCCG-C---C--GAT-T-AGGT--T-TTCCGACGATGGTGCCCCCACGAAG
583 GCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAG
* * * *
4802382 AAAAATACGACACCAGCACATGCCCGAGCCTAGCATGGGCTGCCGCAACCCTC-GATCCGGTCTG
648 AAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAG-TCCGGTCCG
4802446 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
712 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * **
4802511 CCACGAAACGAGCGTGCGAGTGCTCAGCTGGACAGAGGGGTGGGATGCACAAGCCGGGGATCGAC
777 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGT
* * * * * * * * * * * *
4802576 CGGGTCTCCCTCTACGTGTTACCAATCCAGTTGCAACAACCGTCAATCCGGTCTGAT
842 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGTCTAAT
** * *
4802633 CTTAGACTGGGAATGAACTTTGTATGGCTAAGCCAACCGACGAAACGAGCGGGCGGGCAGGCTTG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGC-GG---G
** * * *
4802698 CAAGCACTACGCCAGCCAGAGAGACAGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * ** * *
4802763 TTAGGCATATCTTTATATTTCTATGTGACAATACCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* ** *
4802828 TCCCCTAAGCCTTCACGTGAAGTTTCATGGGTAGACGACTCGTTTTCTATTTTTCATAATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
*
4802893 AAACTTTTT-ACGGTTTC-GAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
257 AAACTTTTTGA-GG-TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
4802956 TAGACATGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTCAGGTAAAAACTCGAAGTGTAC
320 TAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
** *
4803021 AAGATTTTGTGACCATTTGAAAAAAGTGTAGCCATTTCAGACACTTTAATGGCTACTAGCAGCAA
385 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
4803086 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC-AGGGTTTGATGAGAGATAGGC
450 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGG
* * * *
4803150 AGCCAATATAAGGGCCAAGTACTAGCACCCATCGTACATCATGTTCGCACACCACCCTCCGGCCC
514 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCC-CCGGCCC
* * *
4803215 GCCCGATCGTCGGAACCCCAATGCCG-C---C-GG--C-CAGGT--T-CTCTGACGATGGTGCCC
576 -CCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCC
* * * * * * *
4803269 CGGCAAAGAAAAATGCGGCACCAACACATGCCCGAGCCTAGCATGGGCTACTGCAACCCTCGGTC
640 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTC
* *
4803334 TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
705 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
4803399 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGTAAGCCAGG
770 AGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * * * * *
4803464 GATCGGTCGAGTCCCCCTCTACATGCTGCCGATCCTGCTGTCACAACCCTC-AGTCCGATTTGAT
835 GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGA-TCTGGTCTAAT
* * *
4803528 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGGCGGGCGGGCAGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGCGGG
* * * *
4803593 CGCTACGTCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * * * * *
4803658 GCACATCTTCATATTTTTACGTGCCAAAGCAATTTTTATGCCTTGTAAATTCATATAATGGTCCC
131 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* * * * * * *
4803723 TTAAGCCTTCACGTGAATTTTTATGGCAAGATGACTCGTTCTCTATTTTTGATGATTTTCGAAAG
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * * *
4803788 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-AAATGGATTTTTGGCCCCGAACTTGGTAGAC
261 TTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAA-GGAGTTTTGGCCCCAAACTTGGTAGAC
* * * *
4803852 GTGATCCTTGTTTTTTTGTTGGCATGCACAAAAAGATTCAACTAAAAACTCGAAGTGTACAAGAT
325 ATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
4803917 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
390 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
4803982 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
455 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
4804047 TATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCTCACACCCCCAGGCCCCCCCGATCG
520 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCG
* ** ** * *
4804112 TCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGATACTCCGACGATGGTGCCCTGACGAAGA
584 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * * *
4804177 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTAACCCTCGGTCCGGTCCAAT
649 AAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* * *
4804242 CTTAGACTGGGAATGAACTACGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCT
714 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * *
4804307 ACGAAACGGGCGTGTGTGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGT
779 ACGAAACGAGC--GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGT
* * * * * *
4804372 CGGGTCCCCCTCTGCGTGCTGCCAATCTTGCTGCCGCAACCCTTGGT-TCGGTCTGAT
842 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCT-GGTCTAAT
*
4804429 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCATGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGCCGG---GCGGG
* * *
4804494 CGGGCACTACGCCGGCTAGAGACACGGGATGCCCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** * *
4804559 TTAGGCACATCTTCACATTTCCACGTACCAATGCCAATTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
*
4804624 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTGG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * *
4804689 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAAGCGTTTTGGCCCCACACTTGGTA
257 AAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * *
4804754 GACATTATCGTTGTATATTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
322 GACATGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* ** *
4804819 AGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAAGCTATTGGCAGCAAA
386 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
4804884 CCTGTAAAATCTCAAATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGTGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** *
4804949 CCAATATAAGATCCAAGTACCAGCACCCATCGCACATTATGTGCGCACACCCCCCGGCCCCCCGA
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGA
* * * **
4805014 TCGCCGGAACCCCAATGTCGTCGGTCAGGCTCTCCGGTGATGCTCCAACGATGGTGCCCCGTTGA
581 TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGA
* * *
4805079 AGAAAAATGTGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAAACCTCAGCCCGGTCC
646 AGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCCGGTCC
*
4805144 GATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
711 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * *
4805209 CCCATGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCAGGATGCACAAGCCAGGGATCGG
776 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGG
* * * *
4805274 TCGAGTCCCCCGCTGCATGCTGCCGATCTTGCTGCCACAACCCTCGATCTGGT-TCAAT
841 TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGTCT-AAT
* *
4805332 CATAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGCGGG
* **
4805397 AACTACGCCGGCCAGAGAGACGGGATTTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
* * * *
4805462 GTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTAAAACAATGGTCCC
131 GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
4805527 TTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTCTTTTTCATGATTTTTGAAAC
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
* * *
4805592 TTTTTGAGGTTCGGGATTTTTTAAAAATTTTTCGGAAGGAGTTTTGGCCCCAAATTTGGTAGACG
261 TTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACA
4805657 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
326 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
* **
4805722 TTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTCCTACTGGCAGCAAACCTGT
391 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
4805787 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
456 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * *
4805852 ATAAGGGCCAAGTACCAGCACCCTTCGCACATCATGTGCGCACACCCCCTGGCCCCCTGATCGTC
521 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCC
* * * ** **
4805917 GGAACCCCAATACCGTCGGTCAGGTTCTCCAGTGATGGTCCGGTGATGGTGCCCCGGTGAA-AAA
586 GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAA
* * ** * *
4805981 AATGCGGCACTAGCACAAG-CCGAGCCTAGCATGTGCTGCCGCAACCCTCCA-TATGATCCAATC
651 AATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCT-CAGTCCGGTCCGATC
* * **
4806044 TTAGACTGGGAATTAACTCCGTATGCTTAGACTAGGAATGAACTCCGTATGGGTAAGTCAACCCA
715 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * ** ****
4806109 CGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGACGGGCGAGATGCATAAATTAGGGAT-GGTCGG
780 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG
** ** * * * *
4806173 GTCCCCCTCTGAATGCTATCGATCCTGCTACCGCAACTCTCGGTCTGGTCCT-AT
845 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGT-CTAAT
* * * * *
4806227 CTTAGATTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAAAGAGCGTGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCG-GC---CGGGCGGG
* * * *
4806292 CGGGCACTACGTCAGCCAGAGAGACGGGATGCCCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** *
4806357 TTAGGCACATCTTCATATTTTTGCACGCCAATGCCATTTTTATGACTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
4806422 TCCATTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCCTTTTCTATTTTTCATGATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
4806487 AAACTTTTTG-GGTTTGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGACCCCAAACTTGGTA
257 AAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * *
4806551 GACATGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAGTTCAGCCAAAAACTCGAAGTGTACAA
322 GACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
4806616 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAAT-GCTTACTGGCAGCAAA
387 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC-TACTGGCAGCAAA
*
4806680 CCTGTAAAATCTCAAATGCT-TTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* *
4806744 CCAATATAAGGGCCATGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCCCCCG
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCG
** * ** *
4806809 ATCGCTAGAACCCCAATGCCGTCGATCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACG
580 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACG
* * * *
4806874 AAGAAAAATGCTGCACCAGCACATGCTCGGGCAC-AGCATGTGCTGCCGTAACCCTCAGTCCGGT
645 AAGAAAAATGCGGCACCAGCACATGCCCGAGC-CTAGCATGTGCTGCCGCAACCCTCAGTCCGGT
* *
4806938 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGTATGTCTAAGTC
709 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * * *** *
4807003 AACCCACTAAACGAGCGTGTGGGCGCTCAGCCGACCAGAGGGGTGGGATGCGTAAGCCGAAAATT
774 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* * * * * * * * * *
4807068 GGCCGGGTCCCCTTCTACATGCTACTGATTCTGCT-ACAGCAACCCTCAATCTGGTCTGAT
839 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCA-CAACCCTCGATCTGGTCTAAT
* * * * *
4807128 CTTAGATTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGGGTGGGCATG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGC--G
* *
4807193 CGAGCACTACGCCGGCTAGAGAGACGGGATGCGCATGCCGTGGATCGATAGGGTGGTAGGTGGG-
64 -G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4807257 TTAGGCACATCTTTATATTTCTGTGTGACAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
4807322 TCCCTTAACCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGA-TTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * * * * *
4807386 AAAACTTTTT-ATAGTTCGGGATTTTTAAAAATTTTTTTGGAATGATTTTTTGCCCCAAACTTGG
257 -AAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
*
4807450 TAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAATCGAAGTGTAC
320 TAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * *
4807515 GAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACCGGCAGCAA
385 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
4807580 ACATGTAAAATATCAAATGCT-TCTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
450 ACCTGTAAAATCTCAAATGCTCT-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * ** * *
4807644 GGCCAATATAAGGGTCAAGTGCTGGCACCCATCACACATCATGTGCGCACACCCCCTCGACCACC
514 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCC-CC
** * ** ** *
4807709 CCGATCGTAGGAACCCCAATGCCGTCGGTCAGGTTTTTTGACGATGCTCCAGTC-ATGGTGCCCC
577 CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCC-GACGATGGTGCCCC
* * * * ** * ** *
4807773 GAGGAAGAAAAATTCGGCACCAGCACATGCCCGAGCCCAGCATGTACTATCGAAACCCTTGGTCT
641 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCC
* * * * * *
4807838 GATCCGACCTTAGACTGGGAATGAACTCTGTATGCTTACACTGGGAATCAAATCCGTAT-CCTAA
706 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
4807902 GTCAACCCACAAAACGAGCGTGTGGCCGCTCCGTCGGCCAGAGGGGCGAGATGCGCAAGCCGGGG
771 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
*** * *
4807967 ATCAACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCACAACCCTCGGTCTGGTTCT-AT
836 ATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGG-TCTAAT
** ** * * *
4808030 CTTAGACTGGGAATGAACTCTATATGCCTAAGATAAACCGACGAAAC-A--AG-CAGGCGGGCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAG-CCAACCGACGAAACGAGCGGCCGGGCGGGCGG
* *
4808091 GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTTA
65 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* *
4808156 GGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACTATGGTCC
130 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * **
4808221 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAGGATTTTCAAAA
195 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA
* * *
4808286 ATTTTTGAGGTTCGGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGAC
260 CTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * *
4808351 GTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAAATT-AGCTAAAAACACGAAGTGTACAAGA
325 ATGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
4808415 TTTTGTGACCATTTGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTGGTAGCAAACCT
389 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
4808480 GTAAAATCTCAAATGCTCTTTAATGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCA
454 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
*
4808545 ATATGAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCGATCG
519 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCG
* *
4808609 CTGGAACCCCAATGCCGCCGGTCAGGTTCT-C-----TG----G-CGATGGTGCCCCGACGAAGA
584 CCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGA
* * ** * *
4808663 AAAA-GATGGCACCAGCACATGCCTGAGCCTAGCATGTGCTGTTGCAACCCTCGGTTCGGTCCGA
649 AAAATG-CGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGA
* *
4808727 TCTTAGA-TCGAGAATGAACT-CGTGTGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
713 TCTTAGACT-GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
** * * * * ** *
4808790 CCATAAAATGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATACACAAGCTAGGGATC-AT
777 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGT
* * * ** *
4808854 CCGGGTACCCCTCTGCGTGCTGTCGATCCTACTATCACAACCCTCGATCCGGTCTAAT
842 -CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGTCTAAT
* * * *
4808912 CTTAGACT-GGAATGAAATCTGTATGCCTAAGCCAACCGACAAAACGAAAAGGCGGGCGGCGAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG---A-GC-GGC--CGGGC
* * ** ** *
4808976 GAGCGGGCATTACGCTTGCCAGAGAGACAAGATGCGCAAGCCGTGGATCGATAGGGTGATAGGTG
59 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
4809041 GGTTTAGGTACATGTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAA
124 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
4809106 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCATAATTT
189 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
* * * * * * * * *
4809171 TTGAAAGTTTTT-ACGGTTTGAGATTTTTTCAATTTTTTTCGAAAGGAATTTTGGTCACAAACTT
254 TTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * * * *
4809235 GGTAGACGTCATCCTTGTATTTTTGTTGGCATTCACAAAAAATTTCAGCTAAAAACTCGAACTGT
318 GGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
* * * *
4809300 ACAACATTTTGTGACCATTTGAAAAACGTGTCCCCATTTCAGACACTTTAATTGCTACTGGTAGC
383 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
*
4809365 AAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTC--------A--A-GG-T---
448 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
*
4809415 ----CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCC
513 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-GCCC
* * *
4809476 CCCGATCGCTGGAACCCCAATGCC-ACTGATCAGGTTCTCC------G----G-CGATGGT-CTC
576 CCCGATCGCCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGC-C
* ** *
4809528 TCGACGAAGAAAAATGCGGCACCAGCACATGCTTGAGCCTAGCATGTGCTGCTGCAACCCTC-GA
639 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAG-
* * * *
4809592 TCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATAAACTTCGTATGCC
703 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * *
4809657 TAAGTCAACCCACGAAATGAGCGGGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGTAAGCCG
768 TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* *
4809722 GGGATCGGTCGGGTCCCCCCTCTGCGTGCT---G-T-C-G-T-----AACCCT-TAGCTGGTCTA
833 GGGATCGGTCGGGT-CCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGTCTA
4809774 AT
897 AT
* * * * * *
4809776 CTTAGTCTGGGAATGAACTTCGTATGCCTAATCCAACTGACGAAATGAGCGGGCGGGCGGGCGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGC---
** * *
4809841 TGGGCACTACGCCGG-TTGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTTGGTGGGT
63 -GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * **
4809905 TTAGGAAGATCTTCATATTTCTGTATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4809970 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTATATTTTTCATGATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
* * *
4810035 AAGCTTTTTGCGGTT-GAGGA-TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCGAAACTTGGT
257 AAACTTTTTGAGGTTCG-GGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * * *
4810098 AGATACGATCCTTGAATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAAATCGAAGTGTACA
321 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
4810163 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGTAAA
386 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
4810228 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * * *
4810293 CCAATATAAGGGCCAAGTACCAGCATCCATCACACATCATGTGTGCACACCCCCTAGGCCCCCCG
516 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCG
* * ** *
4810358 ATCACCGGAACCCTAAT---GTC-GTC-GG---TCAAGT--T-CTCCGACGATGGTGCCTCGACG
580 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACG
* * * *
4810412 AAGAAAAATGTGGCACCAGCACATGCCCGGGCAC-AGCATGTGCTGTCGTAACCCTCAGTCCGGT
645 AAGAAAAATGCGGCACCAGCACATGCCCGAGC-CTAGCATGTGCTGCCGCAACCCTCAGTCCGGT
* * *
4810476 CCGATCTTAGACTGGGAATGAACTCCGCATGCTTAAACTGGGAATGAATTCCGTATGCCTAAGTC
709 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * ** * *
4810541 AACCCACGAATCGAGCGTACGGGTACTCAACCAGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
774 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* ** *** *
4810606 GGCCGGGTCCCCCTCTATGTGCTGCCGATCCTGCTGCTGTAACCCTC-ATTCTGATCTAAT
839 GGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGA-TCTGGTCTAAT
* **
4810666 CTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAATAAGCAGGCAGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGC---CGGGCGGG
* * * * * *
4810731 CGGGGACTACGTCGACAAGAAAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
4810796 TTAGGCACATCTCCATATTTTTGCATGCCAATGCCATTTTCATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
4810861 TCCCTTCAA-CCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGAATTTT
192 TCCCTT-AAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* ** * *
4810925 GAAACTTTTTGTGGTTCAAGATTTTATAAAATTTTTTCGGAAGGAGTTTTGGCCACAAACTTGGT
256 GAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * * *
4810990 AGACACGATCCTTGAATTTTTCTTGGCATGCACAAAAAAATTCAGCTAAACACTCGAAGTGTACA
321 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
4811055 AGATTTTGTAACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCAAA
386 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
4811120 CCTGTAAAATCTCAAATGCTCCTTAAGGGGGTGTGAGTTCTAGAGGTTTGATGAGGGATAGGGGG
451 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* *
4811185 CCAATATAATGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCTAGCCCCCC
516 CCAATATAA-GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC--GGCCCCC
* * * * *
4811250 CGATCGCCAGAACCCTAATGTCGTCGGTCAGGTTCTCCTGCGATGCTCCG
578 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCG
4811300 GGGATCGGTG
Statistics
Matches: 8351, Mismatches: 986, Indels: 407
0.86 0.10 0.04
Matches are distributed among these distances:
858 7 0.00
860 194 0.02
861 236 0.03
862 17 0.00
863 1 0.00
864 19 0.00
865 39 0.00
866 3 0.00
867 1 0.00
868 2 0.00
870 5 0.00
871 5 0.00
872 78 0.01
873 408 0.05
874 27 0.00
875 130 0.02
876 104 0.01
877 30 0.00
878 285 0.03
879 74 0.01
880 14 0.00
881 55 0.01
882 201 0.02
883 2 0.00
884 2 0.00
885 4 0.00
886 2 0.00
887 188 0.02
888 29 0.00
889 14 0.00
890 80 0.01
891 1453 0.17
892 247 0.03
893 80 0.01
894 43 0.01
895 474 0.06
896 540 0.06
897 146 0.02
898 535 0.06
899 634 0.08
900 261 0.03
901 466 0.06
902 238 0.03
903 313 0.04
904 4 0.00
905 440 0.05
906 221 0.03
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (898 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGCGGGCGGG
CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC
TTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACA
TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGCC
GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAA
AATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCT
TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG
TCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCGATCTGGTCTAAT
Found at i:4806081 original size:26 final size:26
Alignment explanation
Indices: 4806043--4806094 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
4806033 ATGATCCAAT
* *
4806043 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4806069 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4806095 GGTAAGTCAA
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.19, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4806972 original size:26 final size:26
Alignment explanation
Indices: 4806943--4806994 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
4806933 CCGGTCCGAT
*
4806943 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
4806969 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
4806995 TCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.17, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:4807896 original size:26 final size:26
Alignment explanation
Indices: 4807846--4807896 Score: 66
Period size: 26 Copynumber: 2.0 Consensus size: 26
4807836 CTGATCCGAC
* * * *
4807846 CTTAGACTGGGAATGAACTCTGTATG
1 CTTACACTGGGAATCAAATCCGTATG
4807872 CTTACACTGGGAATCAAATCCGTAT
1 CTTACACTGGGAATCAAATCCGTAT
4807897 CCTAAGTCAA
Statistics
Matches: 21, Mismatches: 4, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 21 1.00
ACGTcount: A:0.29, C:0.20, G:0.22, T:0.29
Consensus pattern (26 bp):
CTTACACTGGGAATCAAATCCGTATG
Found at i:4809632 original size:26 final size:26
Alignment explanation
Indices: 4809603--4809655 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4809593 CTGGTCCGAT
* *
4809603 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
4809629 CTTAGACTGGGAATAAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4809655 C
1 C
4809656 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:4810510 original size:26 final size:26
Alignment explanation
Indices: 4810481--4810533 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4810471 CCGGTCCGAT
*
4810481 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAAACTGGGAATGAACTCCGCATG
* *
4810507 CTTAAACTGGGAATGAATTCCGTATG
1 CTTAAACTGGGAATGAACTCCGCATG
4810533 C
1 C
4810534 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGCATG
Found at i:4812113 original size:26 final size:26
Alignment explanation
Indices: 4812084--4812136 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4812074 CCAGTCCAAT
* *
4812084 CTTAGGCTGGGAATGATCTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4812110 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4812136 C
1 C
4812137 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.23, C:0.19, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4812729 original size:475 final size:476
Alignment explanation
Indices: 4811822--4812730 Score: 1340
Period size: 475 Copynumber: 1.9 Consensus size: 476
4811812 CAGCAAACCT
4811822 GTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAGTTCCCCAGGTTTGATGAGGGATAGGGGGCAA
1 GTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAGTTCCCCAGGTTTGATGAGGGATAGGGGGCAA
*
4811887 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCACCGACCCCCCCGAT
66 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCACCGACCCCCCCAAT
** * * * * * **
4811952 CGTCGGATCCCCAATGTCGCCGGTTAGGTTCTCCGATGATGCTCCGACGTTGGTGCCCCGGTGAA
131 CACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
*
4812017 GAAAAATACAGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGTAACCCTCGATCCAGTCCA
196 GAAAAATACAGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGCAACCCTCGATCCAGTCCA
* * *
4812082 ATCTTAGGCTGGGAATGATCTCCGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAAC
261 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * *
4812147 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCTGGGGATCGGT
326 CCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGACGGGATGCGCAAGCTGGGGATCGCT
* *
4812212 CGGGTCCCCTTCTGCGTGCTGCCAATCCTACTTCCGCAACCCTCGGTCTGGTCCGATCTTAGACT
391 CGGGTCCCCTTCTGCGTGCTGCCAATCCTACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACT
4812277 GGGTAGGGGGCCAATATAAGG
456 GGGTAGGGGGCCAATATAAGG
* * * *
4812298 GTAAAATCTCAAATGCTCTTGAATGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
1 GTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAGTTCCCCAGGTTTGATGAGGGATAGGGGGCAA
* * *
4812363 ATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCG-CCCCCCCAAT
66 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCACCGACCCCCCCAAT
** ** * *
4812427 CACCGGAACTGCAATGCCGTGGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCTCGACGAA
131 CACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
*** ** * *
4812492 GAAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTATTGCAACCCTCGATCCTGTCCG
196 GAAAAATACAGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGCAACCCTCGATCCAGTCCA
* *
4812557 ATCTTAGACTGGGAATGAACTCCGTATGCTTTGACTGGGAATGAACTCCGTATGCCTAGGTCAAC
261 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
*
4812622 CCACGAAACGAGCGTGCGGGCATTCAGCCGGCCAGAGGGACGGGATGCGCAAG-TCGGGGATCGA
326 CCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGACGGGATGCGCAAGCT-GGGGATCG-
* * * *
4812686 CT-GGGT-CCCTCTCTGCGTGCTGTCGATCCTGCTGCTACAACCCTC
389 CTCGGGTCCCCT-TCTGCGTGCTGCCAATCCTACTGCCACAACCCTC
4812731 AGTTCGATCC
Statistics
Matches: 383, Mismatches: 47, Indels: 7
0.88 0.11 0.02
Matches are distributed among these distances:
474 5 0.01
475 265 0.69
476 113 0.30
ACGTcount: A:0.23, C:0.29, G:0.28, T:0.20
Consensus pattern (476 bp):
GTAAAATCTCAAATGCTCTTGAAGGGGGTGTGAGTTCCCCAGGTTTGATGAGGGATAGGGGGCAA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGAACACCCCACCGACCCCCCCAAT
CACCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAA
GAAAAATACAGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGCAACCCTCGATCCAGTCCA
ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
CCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGACGGGATGCGCAAGCTGGGGATCGCT
CGGGTCCCCTTCTGCGTGCTGCCAATCCTACTGCCACAACCCTCGGTCTGGTCCGATCTTAGACT
GGGTAGGGGGCCAATATAAGG
Found at i:4813500 original size:26 final size:26
Alignment explanation
Indices: 4813464--4813516 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4813454 TCGGTCCGAT
4813464 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4813490 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4813516 C
1 C
4813517 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4815711 original size:862 final size:860
Alignment explanation
Indices: 4812299--4816995 Score: 5563
Period size: 862 Copynumber: 5.3 Consensus size: 860
4812289 AATATAAGGG
* *
4812299 TAAAATCTCAAATGCTCTTGAATGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
1 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
4812364 TATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCC-GCCCCCCCAATC
66 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
** * ** * *
4812428 ACCGGAACTGCAATGCCGTGGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCTCGACGAAG
131 -CCGGAACCCCAATCCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAG
* * **
4812493 AAAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTATTGCAACCCTCGATCCTGTCCGA
195 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAA-CC-C--T-C-G---G-
* *
4812558 TCTTAGACTGGGAATGAACTCCGTATGCTTTGACTGGGAATGAACTCCGTATGCCTAGGTCAACC
250 TC-----C--GG--T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* ** * * *
4812623 CACGAAACGAGCGTGCGGGCATTCAGCCGGCCAGAGGGACGGGATGCGCAAGTCGGGGATCGACT
299 CACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC
* * * * *
4812688 GGGTCCCTCTCTGCGTGCTGTCGATCCTGCTGCTACAACCCTCAGTTCGATCCCATCTTAGATTG
364 GGGTCCCCCTCTGCGTGCTGCCGAT-C--CTGCT---A--CTCAGTCCGATCCAATCTTAGACTG
** *
4812753 GGAATGAACTCCGTATGCCTAAGCCAACCGATTAAACGAGCGGACGGGCGGACCGGTGGGTGGGC
421 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-C--G-GG--C---GGGCGGGC
* * * * *
4812818 ACTACGCCGGCTAGAGAGACGGCATGCACATGCC-TGGATTGATAGGGTGCTAGGTGGGTTTAGG
474 ACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGG
* **
4812882 CACATCTTCATATTTCTGCATGCCAATGCCATTGTTATGGCTTGTAAATTCATACAATGGTCTTT
539 CACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
* * **
4812947 TAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTTCTTTTTTTCATGATTTTCAAAACT
604 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACT
* * *
4813012 TTTTACGGTTCGGGATTTTTTAAAAATTTTTT-GGAA-GATGTTTTGGCCCAAACTTGGTAGACG
669 TTTTATGGTTCGAGATTTTTT-AAAATTTTTTCGGAAGGA-GTTTTGCCCCAAACTTGGTAGACG
*
4813075 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATT
732 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
4813140 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAACCTA
797 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTA
* *
4813204 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGACAGGAGGCCAA
1 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *** * *
4813269 TATAAGGGCCAAGTACCAGCACCCATCGGACATCATGTGCATGCACCACCTCGGCCCCCTCGATC
66 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
** * * * *
4813334 GCTAGAACCCCAATGCCC-CGGGTCAGGTTCT-TGACGATGCTCCGGCGATGGTGCCTCGACGAA
131 -CCGGAACCCCAAT-CCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAA
* * *
4813397 GAAAAATGTGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTTCGGTTCGGTCCG
194 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACC--C---TC-G---G
*
4813462 ATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
250 -TC-----C--GG--T---CT---GAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * * *
4813527 CCACGAAACGAGCGTACGGGAGCTCAACCGGCCAGAGGGGCGGGATGCACAAGCCAGGTATCTAT
298 CCACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
* * * *
4813592 CGGGTCCCCTTCTGCGTGCTGTCGATCCTCCTGTCGTAACCTTCAGTCTGGTCCAATCTTAGACT
363 CGGGTCCCCCTCTGCGTGCTGCCGA---TCCTG-C-T-A-C-TCAGTCCGATCCAATCTTAGACT
* * *
4813657 GGGAATGAACTCTGTATGCCTAAGCCAATCGACGAAACGAGCGGCCGGGTGGGCGACAGGGCACT
420 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-CGGG-CGG-G-C-GGGCACT
* * * * *
4813722 ACGCCGGCCAGAAAGACGAGATGCGCAAGCTGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCAC
477 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCAC
*
4813787 ATCTTAATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
542 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
*
4813852 GCCTTCACGTGAAGTTTAATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
607 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * *
4813917 T-TCGGTTTGACATTATTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGA
672 TAT-GGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGA
* *
4813981 TCCTGGTATTTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
735 TCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
** *
4814046 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACTGTTTAATGGCTACTGGCAGCAAACCTG
799 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTA
* *
4814108 TAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCGAGGTTTGATGAGTGATAGGGGGCCAA
1 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
*
4814173 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCTCCAAT
66 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCT-CGAT
* * * *
4814236 CGCCGGAACCCAAATACCGTCGATCAGGTTCTCC-AGTGATGCTCCGGCGATGGTGCCCCGACGA
130 C-CCGGAACCCCAATCCCGCCGGTCAGGTTCTCCGA-TGATGCTCCGGCGATGGTGCCCCGACGA
* * * * * *
4814300 AGAAAAATGTGGCACCAGCACATGCCCGAACCCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCC
193 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCT
* * *
4814365 GATCTTAGACTGGGAATGAACTTCGCATGCCTAAATCAACCCACGAAACGAGCGTACGGGCGCTC
258 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTC
* * * * *
4814430 AGCCGGCCAGAGGGGCGTGATGCGCAAGCCGGGGATCGACTGGGTCCCCATCTGCATGCTGCAGA
323 AGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGA
* * * * * * * *
4814495 TGCTGCT-GTCAGTCTGATCCAACCTTAGACTAGGAATGAACTCCGTATACCTAAGCCAATCGAA
388 TCCTGCTACTCAGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * * ** *
4814559 GAAACGAGCGGGCGGGCGGGCAGGCACTATGTCGGCCAAAAATACGGGATGCATAAGCCGTGAAT
453 GAAACGAGCGGGCGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* *
4814624 TGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGG
514 TGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* *
4814689 CTTGTAAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTT
579 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * *
4814754 TCTATTTTTCATGATTTGTGAAACTTTTTGCAT--TTTGGGATTTTTTAAAGTTTTTTTGGAAGG
644 TCTATTTTTCATGATTTTTGAAACTTTTT--ATGGTTCGAGATTTTTTAAAATTTTTTCGGAAGG
* * * *
4814817 AGTTTTGGCCCCAAATTTGGTAGATGTGATCCTTGTTTTTTTGTTGGCATGCACAAAAAAGTTCA
707 AGTTTT-GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
*
4814882 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTTAAAAAAGTGTCCCCATTTCAGACACT
771 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
4814947 TTAATGGCTACTGGCAGCAAACTTG
836 TTAATGGCTACTGGCAGCAAACCTA
*
4814972 TAAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
1 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
4815037 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
66 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
* * * ** * * *
4815102 ATCGGAACCCTAATCCCGTCGGTCAGGTTCTCCGGGGATGCTCCGTCAATGGTGTCCCGACGAAG
131 -CCGGAACCCCAATCCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAG
* *
4815167 AAAAAGGCGGCACCGGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGA
195 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGA
* *
4815232 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAA
260 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
* * *
4815297 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGACCGGGTCCCCCTGTACGTGCTGCCTAT
325 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * *
4815362 CCTGCTACT-GGCCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCTATG
389 CCTGCTACTCAGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
*
4815426 AAACGAGCGGGCGGGCGGGCGCTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATA
454 AAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATA
* * *
4815491 GGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTCTACTTGCCAATGCCATTTTTATGGCTTGT
519 GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGT
*
4815556 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGCAAGACGACTCGTTTTCTAT
584 AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
* * *
4815621 TTTTCACGATTTTTGAAACTTTTTATGGCTCGAGATTTTTTAAAATTTTTTCGGTAGGAGTTTTC
649 TTTTCATGATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-
* *
4815686 GCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAATCAGCTAAAA
713 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA
* *
4815751 ACTCAAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
778 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
4815816 CTACTGGCAGCAAACCTA
843 CTACTGGCAGCAAACCTA
* * * *
4815834 TACAATCTCAAATGCACTTTAAGGGAGTGTGAATTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
1 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* *
4815899 TATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCACACACCCCCCCGGCCCCC-CGATC
66 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
* * * *
4815963 GCTGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCAACGAAG
131 -CCGGAACCCCAATCCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAG
* * * * *
4816028 AAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCTTCGATTCGGTCCGA
195 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGA
*
4816093 TCTTAGACTGGGAATGAACTCCGTTTGCTTAGACTCAAAATGAACTCTGTATGCCTAAATCAACC
260 TCTTAGACT-GG---GAA-------TG---A-A--C----T---C-C-GTATGCCTAAGTCAACC
* * * * * * * *
4816158 CACGGAACGAGCATGCGGGCACTCAGTCGGCCAGA-GGGTGGGATGCACAAGCCGAGGATCGACC
299 CACGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC
* * * * * **
4816222 GGGTCCCCCTCTGCCTGCTGCCAATCTTGCTGCCACAACCCTCAGT-CTAGCTTGATCTTAGACT
364 GGGTCCCCCTCTGCGTGCTGCCGATC---CTG---CTA--CTCAGTCCGATC-CAATCTTAGACT
* * * *
4816286 GGGAATTAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGGGGCAGACGGGTACTACGCC
420 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG--G-CGGGCACTACGCC
* * * * * * *
4816351 GACCAGAGAGACAGGATACGCAAGTCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCCT
482 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
*
4816416 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAGTTCATACAATGGTCCCTTAAGCCTT
547 CATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * *
4816481 CACGTGAAGTTTCATTGCAAGACGATTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTGTGG
612 CACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGG
*
4816545 TTCCGA-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGATCCCAAACTTGGTAGACGTGATCCTT
677 TT-CGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG-CCCCAAACTTGGTAGACGTGATCCTT
* * *
4816609 GTATTTTTGTTGGCATGCACAAAAAAATTTAACTAAAAACTCGAAGTGTACAAGATTTTGCGACC
740 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* *
4816674 ATTTGAAAAAAGTGTCCCTATTTGAGACACTTTAATGGCTACTGGCAGCAAACCTA
805 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTA
* *
4816730 TAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGTGGCCAA
1 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
* * *
4816795 TATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCG--CA-CCCCCTGGCCCCCCCGATC
66 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
* *
4816857 GCCGGAACCCCAATGCCGCCGGTCA-G------G-T--T-CTCCGGCGATGGTGCCCCGATGAAG
131 -CCGGAACCCCAATCCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAG
* * * * *
4816911 AAAAATGCGGCACCAGCACTTGCCCGAGCCCAGCATATGCTACCGTAAACCTCGGTCCGGTCTAA
195 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGA
4816976 TCTTAGACTGGGAATGAACT
260 TCTTAGACTGGGAATGAACT
4816996 TTGTTTGTTT
Statistics
Matches: 3352, Mismatches: 361, Indels: 201
0.86 0.09 0.05
Matches are distributed among these distances:
860 2 0.00
861 125 0.04
862 476 0.14
863 2 0.00
864 224 0.07
865 465 0.14
866 96 0.03
867 1 0.00
868 2 0.00
869 58 0.02
872 4 0.00
873 1 0.00
874 1 0.00
875 5 0.00
876 1 0.00
878 112 0.03
879 5 0.00
882 4 0.00
883 86 0.03
884 1 0.00
885 28 0.01
886 24 0.01
887 47 0.01
888 3 0.00
891 2 0.00
893 18 0.01
894 87 0.03
895 2 0.00
896 272 0.08
897 187 0.06
898 2 0.00
899 3 0.00
901 41 0.01
902 182 0.05
903 62 0.02
904 294 0.09
905 387 0.12
906 35 0.01
907 4 0.00
908 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (860 bp):
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCTCGATC
CCGGAACCCCAATCCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAGA
AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGCAACCCTCGGTCCGGTCTGAT
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTACTCAGTCCGATCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
ACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGG
GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
TTCATGATTTTTGAAACTTTTTATGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGCC
CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
CTGGCAGCAAACCTA
Found at i:4818072 original size:25 final size:26
Alignment explanation
Indices: 4818044--4818095 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4818034 TCGGTCCGAT
4818044 CTTAGACT-GGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4818069 CTTAGACTGGGAATGAAGTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4818095 C
1 C
4818096 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 8 0.32
26 17 0.68
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4818090 original size:26 final size:25
Alignment explanation
Indices: 4818037--4818095 Score: 86
Period size: 26 Copynumber: 2.4 Consensus size: 25
4818027 CCTCGTTTCG
4818037 GTCCG-AT-CTTAGACTGGAATGAA
1 GTCCGTATGCTTAGACTGGAATGAA
*
4818060 CTCCGTATGCTTAGACTGGGAATGAA
1 GTCCGTATGCTTAGACT-GGAATGAA
4818086 GTCCGTATGC
1 GTCCGTATGC
4818096 CTAAGTCAAC
Statistics
Matches: 31, Mismatches: 2, Indels: 3
0.86 0.06 0.08
Matches are distributed among these distances:
23 4 0.13
24 2 0.06
25 8 0.26
26 17 0.55
ACGTcount: A:0.25, C:0.20, G:0.27, T:0.27
Consensus pattern (25 bp):
GTCCGTATGCTTAGACTGGAATGAA
Found at i:4818914 original size:26 final size:26
Alignment explanation
Indices: 4818885--4818935 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
4818875 GGTCCAATCC
4818885 TAGACTGGGAATGAACTCTGTATGCT
1 TAGACTGGGAATGAACTCTGTATGCT
4818911 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCTGTATGC
4818936 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.16, G:0.27, T:0.29
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCTGTATGCT
Found at i:4819814 original size:26 final size:26
Alignment explanation
Indices: 4819785--4819837 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4819775 CTGGTCCGAT
*
4819785 CTTAGACTCGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4819811 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4819837 C
1 C
4819838 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4820735 original size:26 final size:26
Alignment explanation
Indices: 4820683--4820735 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4820673 CCAGTCCGAT
* *
4820683 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
4820709 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
4820735 C
1 C
4820736 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:4823283 original size:26 final size:26
Alignment explanation
Indices: 4823247--4823297 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
4823237 GATCTGATCC
4823247 TAGACTGGGAATGAACTCCGTATGCT
1 TAGACTGGGAATGAACTCCGTATGCT
*
4823273 TAGACTTGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
4823298 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCT
Found at i:4824158 original size:26 final size:26
Alignment explanation
Indices: 4824129--4824181 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4824119 CTGGTCCGAT
4824129 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4824155 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4824181 C
1 C
4824182 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4825012 original size:26 final size:26
Alignment explanation
Indices: 4824983--4825033 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
4824973 GGTCCGATCT
4824983 TAGACTGGGAATGAACTCCGTATGCA
1 TAGACTGGGAATGAACTCCGTATGCA
*
4825009 TAGACTGGGAATGAACTCTGTATGC
1 TAGACTGGGAATGAACTCCGTATGC
4825034 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.18, G:0.27, T:0.25
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATGCA
Found at i:4825912 original size:26 final size:26
Alignment explanation
Indices: 4825883--4825933 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
4825873 CTGATCCGAT
4825883 CTTAGACTCGGAATGAACTCTGTATG
1 CTTAGACTCGGAATGAACTCTGTATG
*
4825909 CTTAGACTGGGAATGAACTCTGTAT
1 CTTAGACTCGGAATGAACTCTGTAT
4825934 TCCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.27, C:0.18, G:0.24, T:0.31
Consensus pattern (26 bp):
CTTAGACTCGGAATGAACTCTGTATG
Found at i:4826811 original size:26 final size:26
Alignment explanation
Indices: 4826782--4826834 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4826772 TTGGTCCGAT
4826782 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4826808 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4826834 C
1 C
4826835 CTAAGTCAAA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4828420 original size:26 final size:26
Alignment explanation
Indices: 4828391--4828443 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4828381 CCAGTCCGAT
4828391 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4828417 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4828443 C
1 C
4828444 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4829325 original size:26 final size:26
Alignment explanation
Indices: 4829289--4829363 Score: 141
Period size: 26 Copynumber: 2.9 Consensus size: 26
4829279 TCCGATCTTA
4829289 GACTGGGAATGAACTTCGTATGCTTT
1 GACTGGGAATGAACTTCGTATGCTTT
4829315 GACTGGGAATGAACTTCGTATGCTTT
1 GACTGGGAATGAACTTCGTATGCTTT
*
4829341 GACTGGGAATGAACTCCGTATGC
1 GACTGGGAATGAACTTCGTATGC
4829364 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.24, C:0.17, G:0.28, T:0.31
Consensus pattern (26 bp):
GACTGGGAATGAACTTCGTATGCTTT
Found at i:4831141 original size:26 final size:26
Alignment explanation
Indices: 4831112--4831164 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4831102 CCGGTTCGAT
4831112 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
* *
4831138 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTAGGAATGAACTTCGTATG
4831164 C
1 C
4831165 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.15, G:0.25, T:0.32
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTTCGTATG
Found at i:4831581 original size:904 final size:900
Alignment explanation
Indices: 4827530--4832245 Score: 5565
Period size: 904 Copynumber: 5.2 Consensus size: 900
4827520 GATCTTAGGT
* * * * *
4827530 TGGGAATGAACTTCCTATGCCTAAGTCAACCCACGAAATGAGCGAGC-GG-GCACCAAGCCGGTC
1 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGC-CCAA-CCGGCC
** ** * *
4827593 AGAGGGGCGGGATGCGCAAGCTAGGGATTTA-TAGGGTCCACCTCTGCGTGCTGCCGATCCTGCT
64 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCTCTGCGTGCTGCCAATCCTGCT
* * * * * *
4827657 ACCACCACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTGAGCCAACCGA
128 ACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * * *
4827722 TGAAATGA-----GG--GGGCAGTCGGGCACTACGCCAGCCAGAGAGA-TGGGATGCGCAAGCCA
193 CGAAAAGAGGGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACT-GGATGCGCAAGCCG
* **
4827779 TGGATCGATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-A-G-CATTTT
257 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
*
4827841 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACT
322 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * * *
4827906 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACAGTTTGAAATTTTTTAAAATTTTTTCGGA
387 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAA-TTTTTCGGA
* * *
4827971 AGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAGAAT
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* * * *
4828036 TCAGCTAAAAAGTCGAAGTGAAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAAC
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
4828101 ACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT-AAGGGGTTGTGAGTTC
581 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGG-TGTGAGTTC
* **
4828165 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCCCACATCAT
645 TTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
* * * * * * *
4828230 GTGGGCACACGCCCCCCGACCCCCCCGATCGTCGAAACCCTAATGCCGTCGATCAAGTTCTCCGA
710 GTGCGCACAC-CCCCCCGGCCCCCTCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGG
* * * * *
4828295 CGATGCTCTGACGATGGTGCCCCGACGAAGAAAAATGTGACACCAGCACATGCCCGTGCCCAGCA
774 CGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCG-GACCAGCACATGCCCGAGCCCAGCA
* * *
4828360 TGTGCTACCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGAC
838 TGTGCT-CTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGAC
* * * * **
4828424 TGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCAG-GCGGGAGCTCTGCCGGCCA
1 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGC-GTGCAGGCGCCCAACCGGCCA
* * * * * * * **
4828488 AAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCTGTCTATCCTACTGT
65 GAGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTAC
* * * * * * *
4828553 CGTAACCCTCCG-TTCAGTCTGATCTAAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACTGAC
130 CGCAACCCT-CGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* *
4828617 G--AA-A-----TGA---GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
194 GAAAAGAGGGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACTGGATGCGCAAGCCGTG
*
4828671 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAGTGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTA
* * *
4828736 TGGCTTGTAAATTCATACAATGGTCCCTCAAGCCTTCACGTGAAGTTT-ACGGGCAAGACAACTC
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA-TGGCAAGACGACTC
** * *
4828800 GTTTTCTATTTTTCACT-ATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAAATTTTTCAGA
388 GTTTTCTATTTTTCA-TGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTT-AAAATTTTTCGGA
* * * * *
4828864 AGGACTTTTGGCCCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTCGGCTTGCACAAAAAAAA
451 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* ** *
4828929 TCAGCTAAAAACTCGAAGTGTACGAGATTTTACGACCATTTGAAAAAAATGTCCCCATTTCAGAC
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
4828994 ACTTTAATGGCTACTAGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTC
581 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-AGGGGTGTGAGTTC
* *
4829059 TTAAGGTTTGATGAGGGATAGGGGGGCAAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
645 TTAAGGTTTGATGAGGGATA-GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
* * * *
4829124 TGTGCGTACACCCCCCCGGCCCCCTCGATC-ACTGGAACCCCAATGCCGTCGGTTAGGTTCTCCG
709 TGTGCGCACACCCCCCCGGCCCCCTCGATCGTC-GAAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * *
4829188 GTGATGCTTCGACGATGGTGCCCTGGCGAAGAAAAATGCGTCACCAGCACATGCCCGAGCCTAGC
773 GCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCG-GACCAGCACATGCCCGAGCCCAGC
* *
4829253 ATGTGCTGTCGCAACCCTTCGTCCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTTGAC
837 ATGTGCTCT-GCAA-CC--C-T-CG----G-TC-----C--GG--T---C--CG-AT-CTTAGAC
*
4829318 TGGGAATGAACTTCGTATGCTTTGAC
875 TGGGAATGAACTTCGTATGCTTAGAC
* * * * *
4829344 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCAGGCCAG
1 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCCCAACCGGCCAG
* ** * **** * * * *
4829409 AGGGGTGGGATGTACAAGCCGGGGATCGGCCAAATCCCTCTCTGCGTGCCGCTAATCCTGCTACT
66 AGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTACC
** * * * *
4829474 ATAACCTTCGATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGA
131 GCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
4829539 AACGAGAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGA
196 AAAGAG-GGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACTGGATGCGCAAGCCGTGG
* * *
4829604 ATCGATAGAGTGGTAGGTGGGTTTAGGCACGTCTTCATATTTCTGTGTGCCGAA-GCCATTTTGA
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCC-AATGCCATTTTTA
* * ** *
4829668 TGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTGCATTTCAAGATGACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * *
4829733 TTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTGGAAA
389 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTCGGAAG
* *
4829797 GAGCTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTGTTGGCATGCATAAAAAAATT
453 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAAAAAATT
* * * *
4829862 CAGCTAAAAACTCGAAGTGTATAAGATTTTGCGACCTTTTGAAAAAAGTGTCCCCATTTCAAACA
517 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * *
4829927 CTTCAATGACTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTT
582 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTT
* * *
4829992 GAGGTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCT-CACATCACG
647 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT-TGCACATCA-T
* * * * *
4830056 GTGCGCATA-CCCCCCGGCCCCC-CGAATTCGCTCGAAAACCCAATGTCGCCGGTCAAGTTCTCA
710 GTGCGCACACCCCCCCGGCCCCCTCG-A-TCG-TCGAAACCCCAATGCCGTCGGTCAGGTTCTC-
* * * *
4830119 TGGCGATGCT---AC--T--AG---C-G-AAAGAAAAATGCGGCACCAGCACATGCCCCGACCCC
771 CGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGG-ACCAGCACATG-CCCGAGCCC
* * *
4830172 AGCATGTGCTGTCGCAACCTTTCCGGTCCCAGTCCCGATCTTAAGACTGGG-ATGAACTTCGTAT
834 AGCATGTGCTCT-GCAACC-CT-CGGT-CCGGT-CCGATCTT-AGACTGGGAATGAACTTCGTAT
* *
4830236 GCTTACAA
893 GCTTAGAC
* * * * * *
4830244 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTACAGGC-ACTAGCCTGCTAG
1 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCCCAACCGGCCAG
* * * * * * *
4830308 AGGGGCTGGATGTGCAAGCCGGGGGATCCG-CTGGGT--CCCTTTGTGTGCTACCGATCTTGCTA
66 AGGGGCGGGATGCGCAAGCC-GGGGAT-CGACTGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTA
* * *
4830370 CTGCAACCTTCGATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
129 CCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * *
4830435 GAAACA-AGCGGGCGGGCGGGTGGGCGGGCACTACGTC-GCCAGAGAAACAT-GATGCGCAAGCC
194 GAAA-AGAG-GGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-TGGATGCGCAAGCC
* * *
4830497 GTGGATCGATAGCGTGGTAGGTGGGTTTATGCGCATCTTCATATTTCTGTGTGCCAATGCCATTT
256 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTT
* *
4830562 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCGTTCACGTGAAGTTTCATGGCAAAACGAC
321 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* **
4830627 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTC-AGGATTTTTTAAAATATTTTCG
386 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAAT-TTTTCG
* * * * **
4830691 GAAGGGGTTTTGGCCCCAAACCTGGTAGACATGATCCTTCTATTTTTGTTGGTGTGCACAAAAAA
449 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
4830756 ATTCAGCTAAAAAGTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAG
514 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
4830821 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAATGGGTGTGATTT
579 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTT
* * * *
4830886 CTCAAGGTTTCATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCT
644 CTTAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCA
*
4830951 TGTGCGCACA-CCCCCCGGCCCCCTCTGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCG
709 TGTGCGCACACCCCCCCGGCCCCCTC-GATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * *
4831015 GTGATGCTCCGACGATGGTGCGCCGGCGAAGAAAAATGCAGGACCAGCACATGCTCAAGCCCAGC
773 GCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGC-GGACCAGCACATGCCCGAGCCCAGC
* * *
4831080 ATGTGCTACTGCAACCATCGGTCCGGTTCGATCTTAGACTAGGAATGAACTTCGTATGCTTAGAC
837 ATGTGCT-CTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGAC
* ** * *
4831145 TGGGAATGAACTTTGTATGCCTAAGTCAACAAATGAAATGAGCGTGCGGGCGCCCAACCGGCCAG
1 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCCCAACCGGCCAG
* *
4831210 AGGGGCGGGATGCGGAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCAATCATGCTACC
66 AGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTACC
* *
4831275 GCAACCCTC-AGTCCAGTCCGATCTTAGACTGGGAATGAACTACGTATGCCTAAGCCAACCGACG
131 GCAACCCTCGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * *
4831339 AAAAGAGCGGGCAGACGGGCGGGCGGGCGCTACGTCGGCCAGAGAGACTGGATGCGTAAGCCATG
195 AAAAGAG-GGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACTGGATGCGCAAGCCGTG
* **
4831404 GATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
259 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTA
*
4831469 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCGCGTGAAGTTTCATGGCAAGACGACTCG
324 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
4831534 TTTTCAATTTTTCATGATTTTTGAAGCTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTGAAAGA
389 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTCGGAAGG
* * *
4831599 AGTTCTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAATTCA
454 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
4831664 GCTAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGTAAAAAGTGTCCCCATTTCAGACACT
519 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* *
4831729 TTAAGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAA
584 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTAA
*
4831794 GGTGTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGC
649 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGC
* * * *
4831859 GCACACCCCCCCAGCCCCCTCGATTGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
714 GCACACCCCCCCGGCCCCCTCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATG
* ** * * *
4831924 CTTCCGGCGATGGTGCCCCGTTGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCTAGCATGTG
779 C-TCCGACGATGGTGCCCCGGCGAAGAAAAATGCGG-ACCAGCACATGCCCGAGCCCAGCATGTG
* * * * * * *
4831989 CTGCCGCAACCCTCGGTCTGGTTCAATTTTAGACTGGGAATGAACTCCGTAAGCTTAGAC
842 CT-CTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGAC
* * * * * * * * *
4832049 TGGGAATGATCTCCGCAGGCTTAAGTCAACCCATGAAACAAGCATGCAGGCGCTCAACCGGCCAA
1 TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCCCAACCGGCCAG
* * ** * * * * * * * *
4832114 AGGGGAGGGATGCGCAAGCTGGCAATCGGCTGGGTTCCTCTCTGTGTGATGCCAATCTTGCTGCT
66 AGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTACC
* * * *
4832179 GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAATCGAC-A
131 GCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
4832243 AAA
196 AAA
4832246 CGAACGGCAA
Statistics
Matches: 3276, Mismatches: 435, Indels: 213
0.83 0.11 0.05
Matches are distributed among these distances:
890 90 0.03
891 2 0.00
892 3 0.00
893 275 0.08
894 295 0.09
895 91 0.03
896 29 0.01
897 387 0.12
898 153 0.05
899 27 0.01
900 86 0.03
901 95 0.03
902 33 0.01
903 417 0.13
904 472 0.14
905 24 0.01
906 24 0.01
907 2 0.00
908 1 0.00
909 1 0.00
910 1 0.00
911 1 0.00
913 1 0.00
914 1 0.00
915 2 0.00
916 1 0.00
918 2 0.00
919 9 0.00
920 187 0.06
921 25 0.01
922 26 0.01
923 1 0.00
926 1 0.00
928 1 0.00
929 3 0.00
930 57 0.02
931 90 0.03
932 349 0.11
933 11 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (900 bp):
TGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCCCAACCGGCCAG
AGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTACC
GCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
AAAGAGGGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACTGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTCGGAAGGAG
TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTAAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGC
ACACCCCCCCGGCCCCCTCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCT
CCGACGATGGTGCCCCGGCGAAGAAAAATGCGGACCAGCACATGCCCGAGCCCAGCATGTGCTCT
GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGAC
Found at i:4832070 original size:26 final size:26
Alignment explanation
Indices: 4832017--4832071 Score: 83
Period size: 26 Copynumber: 2.1 Consensus size: 26
4832007 TGGTTCAATT
*
4832017 TTAGACTGGGAATGAACTCCGTAAGC
1 TTAGACTGGGAATGAACTCCGCAAGC
* *
4832043 TTAGACTGGGAATGATCTCCGCAGGC
1 TTAGACTGGGAATGAACTCCGCAAGC
4832069 TTA
1 TTA
4832072 AGTCAACCCA
Statistics
Matches: 26, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.20, G:0.27, T:0.25
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGCAAGC
Found at i:4833469 original size:26 final size:26
Alignment explanation
Indices: 4833440--4833492 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4833430 CCGGTCTGAT
*
4833440 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4833466 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4833492 C
1 C
4833493 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4835702 original size:878 final size:878
Alignment explanation
Indices: 4832719--4839289 Score: 8030
Period size: 878 Copynumber: 7.4 Consensus size: 878
4832709 ACTTTGTATG
* * *
4832719 CTTAGACTGGGAATGAACTCCGTAT-ACTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGA
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGA--A-GCGGGCGGGCGG-
** * *
4832783 CGATCGACGTAACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
62 CGGGC-AC-T-ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* *
4832848 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
124 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
4832913 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATCTTTCACAATTT
189 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* *
4832978 TCAAAACTTTTTGCGGTTCGGGATTTTTTGAAATTTTTTCGGAAGGAGTTTTGGCCCCAAGCTTG
254 TCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* * *
4833043 GTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCTAAAGTGT
319 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC-GAAGTGT
* * *
4833108 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTGCTACT-GCCAA
383 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCG-CAG
* * * *
4833172 CAAACCTGTAAAATCTCAAATGCTCTTGAAGGAGGTGTGAGATCTTGAGGTTTGATGAGGGATAG
447 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * *
4833237 GGGGCCAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCTCGGACC
512 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CC
* * * *
4833302 CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCC-G-GAATGCTCCGGCAATGGTGCC
576 CCCCGATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCAGCG-ATGCTCCGACGATGGTGCC
* * * * * * *
4833365 CCGGCGAAGAGAAATGCGGCACCAGCGCATGCTCGAGCCTAGCATGTGCTACCGTAACCCTCGGT
640 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--T
4833430 CCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
701 -C-G-C-GATC----A--GGG-AT---CT--GTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* *
4833495 AAGTCAACCCACGAAATGAGCGTGAGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCTGG
750 AAGTCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGG
** *
4833560 GGATC-ACAAGGTCCCCCTCTACGTGCTCTCAATCCTGCTATCGCAACCCTCATTCCGGTCCGAT
815 GGATCGAC-AGGTCCCCCTCTACGTGCTCTCAATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* ** *
4833624 CTTAGATTAGGAACAAACTCTGTATGCCTAAGCCAACCGACGAAACGAACGGACGGGTGGGCGGT
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAA--G-CGGGCGGGCGG-
*
4833689 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
4833754 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTGTGGGC-TGTAAATTCATACAATG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT-GGCTTGTAAATTCATACAATG
* *
4833818 GTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
191 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * * *
4833883 AAAACTATTTGCTGTTCGGGATTTTTTTAAATATTTTT-GAAAGGAGTTTTGGCCCCAAACTTGG
256 AAAACTTTTTGCGGTTCGGGATTTTTTAAAAT-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* *
4833947 TAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAGAAATTCAGCTAAAAACTCGAAGAGTAC
320 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * * *
4834011 AAGATTTTGTGACCAATTGAGAAAAGTGTCCCCATTTGAGACACTTTAGTGGCTACTGGCAGCAA
385 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAA
* * *
4834076 ACCTCTAAAATCTCAAATGCTCTTTGAA-GGGGTGTGAGTTCTCGAGGTTTGCTGGGGGATAGGG
450 ACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* **
4834140 GGCCAATATAAGGGCTAAGTACCAGCACCCATCATACATCATGTGCGCACA-CCCCCCGGCCCCC
514 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC
* ** * *
4834204 CAATCACCGGAACCCCAATGCCA-CCGGTCAGGTTCTCCAACGATGCTCCGGCGATGGTGCCCCG
579 CGATCGTCGGAACCCCAATG-CAGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCG
* * * *
4834268 ATGAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCTG
643 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TC--
* * *
4834333 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATAAACTCCGTTTGCCTAAG
702 G--CGATC----A--GGG-AT---CT--GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* ** * *
4834398 TCAACCCATGAAACGAGCGTGCCGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGAAAGTCT-GGG
753 TCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CTGGGG
* * * * * **
4834462 ATCGACCGCGTCCCCCTATGCGTGCTGC-CAATCCTGCTGCCGCAACCTTTCA-TCCAGTTTGAT
817 ATCGACAG-GTCCCCCTCTACGTGCT-CTCAATCCTGCTGCCGCAACC-CTCAGTCCGGTCCGAT
* * * * * *
4834525 CTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCAACCGACGAAAC-TAGCAGGCGGGCGGGCGA
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAAGCGGGCGGGC-GGCGG
* * * * * * *
4834589 GCACTATGCAGACTAGAGAGATGGGATGCGCAAGCCATGGATCGATAGTGTGGTAGGTGGGTTTA
65 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
4834654 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGGTCC
130 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * **
4834719 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCAATTTTTCATGATTTTTTAAA
195 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* * * * * * **
4834784 CTTTTTACGGTTCAGGATTTTTTTAAATTTTTTAGGAAGGATTTTTGGCCCCAAACTTGGTGGGT
260 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
*
4834849 GTGATCCTTGTATTTTT-TTCGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGA
325 GTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
4834913 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCATACACTTTAATGGCTACTCGCAGCAATCCT
389 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAACCT
*
4834978 GTAAAATCTCAAATGCTCTTTACGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
454 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
4835043 ATATAAGGGCCAAGTACTAG-AGCCAATCGCACATCATGTGGGCACACCCCCCCTGGCACCCCCG
519 ATATAAGGGCCAAGTACCAGCA-CCCATCGCACATCATGTGCGCACACCCCCCC-GGC-CCCCCG
*
4835107 ATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCAGTGATGCTCCGACGATGGTGCCCCGACG
581 ATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACG
* *
4835172 AAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCG-G-TCA-G
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCGATCAGG
*
4835234 G-TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGAG
711 GATCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGAG
*
4835296 GGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATC-ACAAGGTCCCCCTCTACGTG
776 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGAC-AGGTCCCCCTCTACGTG
* *
4835360 CTCTCAATCCTGCTGTCGCAACCCTCATTCCGGTCCGAT
840 CTCTCAATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* ** *
4835399 CTTAGATTAGGAACAAACTCTGTATGCCTAAGCCAACCGACGAAACGAACGGACGGGTGGGCGGT
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAA--G-CGGGCGGGCGG-
*
4835464 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCAGTGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
*
4835529 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
4835594 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTGACGATTTTCG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
** * **
4835659 AAACTTTTTGTTGTTAGAAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
257 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
4835724 GACGTGATCCTCATATATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
322 GACGTGATCCT--TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
*
4835789 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
385 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAA
* * *
4835854 ACCTGTAAAATCTTAAATGCTCTTGAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGG
450 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* *
4835919 GCCAATATAAGGGCCAAGTACCAGTACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCTC
515 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC-C
* ** * * * * *
4835984 CGAGCACCGAAACCTCAATGCTA-CCGGTCAGGTTATCCGGCGATGCTCCGACGATGGTGCACCG
579 CGATCGTCGGAACCCCAATGC-AGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCG
** ** * *
4836048 ACGAAGAAAAATGCGGCACCAGCACATATCCGAGCATAGCATGTGCTACTGCAACCCTCGATCCA
643 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-----
*
4836113 ATCCGATCTTAGACTGGGAATTAACTCTGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAG
703 ---CGATC----A--GGG-----A-TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* *
4836178 TCAACCCACGAAACGAGCGTGTGGGCGCTCAGCCGACCAGAGGGGCGGGATGCGCAAGCTGGGGA
753 TCAACCCACGAAACGAGCGTGAGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGA
* * * * * *
4836243 TCGACCGGGTCCCCCTTTACGTGCTGC-CAACCCTGCTGCCGTAACACTCAGTCTGGTCCGAT
818 TCGA-CAGGTCCCCCTCTACGTGCT-CTCAATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* * *
4836305 CTTAGACTGGGAATGAACTCCGTATGCCTAAGGCAACCGACGAAACG-AGCGGGCGGGCAGGCGG
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAAGCGGGCGGGC-GGCGG
* * * * * *
4836369 GCACTACGCCGGCCAAAAACACGGGACGCGCAAGCCGTGGATCGATAGGGTGGTAGGCGGGTTTG
65 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
4836434 GGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTG--------TA-AAT--T--
130 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
**
4836486 C---AG-------GTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTTAAA
195 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* * * ** ** * *
4836541 CTTTTTTACAGTTCGAGATTTTTTAAAATTTCTTT-GGAAGGACCTTTGTTCCCAAACTTAGTGG
260 C-TTTTTGCGGTTCGGGATTTTTTAAAATTT-TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * *
4836605 ACGTGATCCTTGTATTTTTGTTGGTATGCACAAAACAATTCAACTAAAAACTCGTAGTGTACAAG
323 ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* ** * *
4836670 ATTTTGTGACCATTAGAAAAAAGTACCCCCATTTCAGACACTTTAATGGCAACTCGCAGCAATCC
388 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAACC
*
4836735 TGTAAAATCTCAAATGCTCTTTACGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
453 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * *
4836800 AATATAAGGGCCAAGTACTAG-AGCCAATCGCACATCATGTGGGCACACCCCCCCTGGCACCCCC
518 AATATAAGGGCCAAGTACCAGCA-CCCATCGCACATCATGTGCGCACACCCCCCC-GGC-CCCCC
* *
4836864 GATCGTCGGAACCCCAATGCAGCCAGTCAGGTTCTCCAGTGATGCTCCGACGATGGTGCCCCGAC
580 GATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGAC
* *
4836929 GAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCAACCCTCG-G-TCA-
645 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCGATCAG
*
4836991 GG-TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGA
710 GGATCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGA
*
4837053 GGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATC-ACAAGGTCCCCCTCTACGT
775 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGAC-AGGTCCCCCTCTACGT
* *
4837117 GCTCTCAATCCTGCTGTCGCAACCCTCATTCCGGTCCGAT
839 GCTCTCAATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* * *
4837157 CTTAGATTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAACGGATGGGTGGGCGGA
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAA--G-CGGGCGGGCGG-
* * * * *
4837222 CAGGCGCCACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGGTAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
4837287 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4837352 TCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCA
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCA
* ** * *
4837417 AAACTTTTTGTGGTTCATGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAA-TTGGTA
257 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* *
4837481 GACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACCCGAAGTGTACAA
322 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
4837546 GATTTTGTGACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGTAGCAAAC
387 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAAC
* * *
4837611 CTGTAAAATGTAAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
452 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * * *
4837676 CAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACGCCCCCCAGCCCCCCCGA
517 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGA
* * * * * *
4837741 TCGTCGAAACCCTAATGCTGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCTCGACGA
582 TCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACGA
* * * * *
4837806 AGAAAAATGCAGCACCAGCAGATGCCC-ATGCCCAGGATATGCTG-GGACAAGCCTCGGTTCGGT
647 AGAAAAATGCGGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGCCG-CAA-CC-C---TC-G-
* *
4837869 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTG
703 -CGATC----A--GGG-AT---CT--GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * ** ***
4837934 AACACACGAAACGAGCGT-ACGGGTGCTCAGCCGGCTAGAGGGGCATGATGCGCAAGCCAAGGAT
755 AACCCACGAAACGAGCGTGA-GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGAT
* * * * * * * *
4837998 CGGTCGGGTCCCCCTCTGCATGCTAC-CAATCCTGCTGCCACAACCCTCGGTCTGGTCCAAT
819 C-GACAGGTCCCCCTCTACGTGCT-CTCAATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* *
4838059 CTTAGACTGGGAATGAACTTTGTATGCCTAAGCCAACCGACGAAAC-AA----GC--G-GGCGGG
1 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAAGCGGGCGGGCGGCGGG
* *
4838116 CACTACGCCAGG-CAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTA
66 CACTACGCC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * * * **
4838180 GGCACATCTTCATATTTGTGCGTGCCAATGCCATTTTTATGGCCTATAAACACATACAATGGTCC
130 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
4838245 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAA
195 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAA
* *
4838310 CTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGCA-TTTTGGCCCCAAACTTGGTAGA
260 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTGGCCCCAAACTTGGTAGA
* * *
4838374 CATGATCCTTGTATTTTTGTTGGCTTGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAGA
324 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * *
4838439 TTTTGTGACCATTTGAAATAAGTGTCCCCATTTCAGACAGTTTAATGGCTACTGGCAGCAAACCT
389 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAACCT
* * *
4838504 GTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAATTCTCGAGGTTTCG-TGAGGGATAGAGGGCC
454 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT-GATGAGGGATAGGGGGCC
* * *
4838568 AATATAAGGGCCAAGTACCAGCACCCATCGCACTTCATATGCGTACACCCCCCCGGCCCCTCCGA
518 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC-CCGA
* * * **
4838633 TCGTC-GAATCCCCAATGCCGTCGGTCAGGTTCTCCA-AGATGCTCCGACGATGGTGCCCCGGTG
582 TCGTCGGAA-CCCCAATGCAGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACG
* * *
4838696 AAGAAAAATGTGGCACCAGCACATGCTCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCCAGTC
646 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-G--C-G--
*
4838761 TCATCTTAGACAGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCAGTATGCCTAAGTCA
705 --A---T---CAGGG-AT---CT--GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
* * * * *
4838826 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGCGATGCTCATGCTGGGGATCG
756 ACCCACGAAACGAGCGTGAGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATC-
* * ** * * * * ** * *
4838891 GTCGGGT-CCCCTCTGTGTGCTGTCGATCCTGCTGCCACAATCCTTGGTCCGATCTGAT
820 GACAGGTCCCCCTCTACGTGCTCTCAATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
* *
4838949 CTTAGACTAGGAATGAACT-TCGTATGCCTAAGCCAACCGACAAAACG-AGCGGGCAGGCGGGCG
1 CTTAGACTAGGAATGAACTCT-GTATGCCTAAGCCAACCGACGAAACGAAGCGGGCGGGC-GGCG
* **
4839012 GGCA-TAACGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGAAT
64 GGCACT-ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * * * * *
4839076 TAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCCTATAAACTCATACATTGGT
128 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
*
4839141 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAA
193 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAA
*
4839206 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTGGCCCCAAACTTGGTAG
258 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* *
4839271 ACGTAATCCTGGTATTTTT
323 ACGTGATCCTTGTATTTTT
4839290 ATGGCTACTG
Statistics
Matches: 4952, Mismatches: 537, Indels: 361
0.85 0.09 0.06
Matches are distributed among these distances:
851 2 0.00
852 90 0.02
853 95 0.02
854 2 0.00
855 7 0.00
856 109 0.02
862 2 0.00
864 2 0.00
865 4 0.00
867 1 0.00
869 3 0.00
870 1 0.00
872 2 0.00
873 4 0.00
874 87 0.02
875 192 0.04
876 6 0.00
877 238 0.05
878 509 0.10
879 317 0.06
880 284 0.06
881 7 0.00
882 1 0.00
884 3 0.00
885 2 0.00
886 9 0.00
887 2 0.00
888 1 0.00
889 6 0.00
890 312 0.06
891 419 0.08
892 40 0.01
893 5 0.00
894 6 0.00
895 1 0.00
896 13 0.00
897 272 0.05
898 449 0.09
899 45 0.01
900 208 0.04
901 444 0.09
902 230 0.05
903 265 0.05
904 12 0.00
905 119 0.02
906 122 0.02
907 2 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (878 bp):
CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAAGCGGGCGGGCGGCGGG
CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAC
TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACG
TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCGCAGCAAACCTGT
AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGT
CGGAACCCCAATGCAGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGACGAAGAA
AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGCGATCAGGGATCT
GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGAGGGCGC
TCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGACAGGTCCCCCTCTACGTGCTCTCA
ATCCTGCTGCCGCAACCCTCAGTCCGGTCCGAT
Found at i:4836156 original size:26 final size:26
Alignment explanation
Indices: 4836120--4836172 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4836110 CCAATCCGAT
* *
4836120 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4836146 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4836172 C
1 C
4836173 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:4837903 original size:26 final size:26
Alignment explanation
Indices: 4837874--4837929 Score: 112
Period size: 26 Copynumber: 2.2 Consensus size: 26
4837864 TCGGTCCGAT
4837874 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4837900 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4837926 CTTA
1 CTTA
4837930 AGTGAACACA
Statistics
Matches: 30, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 30 1.00
ACGTcount: A:0.27, C:0.20, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4838802 original size:26 final size:26
Alignment explanation
Indices: 4838765--4838817 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4838755 CCAGTCTCAT
*
4838765 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
*
4838791 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
4838817 C
1 C
4838818 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCAGTATG
Found at i:4839610 original size:26 final size:26
Alignment explanation
Indices: 4839572--4839624 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4839562 CCAGTCTCAT
* *
4839572 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4839598 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4839624 C
1 C
4839625 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4840148 original size:26 final size:26
Alignment explanation
Indices: 4840110--4840162 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4840100 CCAGTCTCAT
*
4840110 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4840136 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4840162 C
1 C
4840163 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4840307 original size:538 final size:538
Alignment explanation
Indices: 4839290--4840749 Score: 2607
Period size: 538 Copynumber: 2.7 Consensus size: 538
4839280 TGGTATTTTT
4839290 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGT
1 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGT
4839355 TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCTTGTGCGCA
66 TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCTTGTGCGCA
4839420 CACCCCCCTGGCCCCCCGATCGCCGGAACCATAATGCCGCCGGTCAGGTTTTTCGACGATGCTCC
131 CACCCCCCTGGCCCCCCGATCGCCGGAACCATAATGCCGCCGGTCAGGTTTTTCGACGATGCTCC
4839485 GACGATGGTGCCTCGGCGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCCGCATGTGCTGCC
196 GACGATGGTGCCTCGGCGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCCGCATGTGCTGCC
*
4839550 GCAACCCTTAGTCCAGTCTCATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTAGGAATGAA
261 GCAACCCTTAGTCCAGTCTCATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAA
4839615 CTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGACGCTCAGCCGGCCAGAAGGAAGGGGA
326 CTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGACGCTCAGCCGGCCAGAAGGAAGGGGA
4839680 TCGATCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTTCCGTAACCCTCAGTCTGGTCTGATCTT
391 TCGATCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTTCCGTAACCCTCAGTCTGGTCTGATCTT
4839745 AGACTGTGAATAAACTCCATATGAAAAAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
456 AGACTGTGAATAAACTCCATATGAAAAAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
4839810 CCCATTTCAGACACTTTA
521 CCCATTTCAGACACTTTA
4839828 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGT
1 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGT
4839893 TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCTTGTGCGCA
66 TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCTTGTGCGCA
4839958 CACCCCCCTGGCCCCCCGATCGCCGGAACCATAATGCCGCCGGTCAGGTTTTTCGACGATGCTCC
131 CACCCCCCTGGCCCCCCGATCGCCGGAACCATAATGCCGCCGGTCAGGTTTTTCGACGATGCTCC
*
4840023 GACGATGGTGCCTCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCCGCATGTGCTGCC
196 GACGATGGTGCCTCGGCGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCCGCATGTGCTGCC
4840088 GCAACCCTTAGTCCAGTCTCATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAA
261 GCAACCCTTAGTCCAGTCTCATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAA
4840153 CTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGACGCTCAGCCGGCCAGAAGGAAGGGGA
326 CTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGACGCTCAGCCGGCCAGAAGGAAGGGGA
4840218 TCGATCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTTCCGTAACCCTCAGTCTGGTCTGATCTT
391 TCGATCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTTCCGTAACCCTCAGTCTGGTCTGATCTT
4840283 AGACTGTGAATAAACTCCATATGAAAAAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
456 AGACTGTGAATAAACTCCATATGAAAAAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
4840348 CCCATTTCAGACACTTTA
521 CCCATTTCAGACACTTTA
* *
4840366 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGT
1 ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGT
* * * * *
4840431 TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACTTCATATGCGTA
66 TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCTTGTGCGCA
* * * ** * * * *
4840496 CACCCCCCCGGCCCCTCCGATCGTCGGATCCCCAATGCCGTCGGTCAGG-TTCTCCAAGATGCTC
131 CACCCCCCTGGCCCC-CCGATCGCCGGAACCATAATGCCGCCGGTCAGGTTTTTCGACGATGCTC
* * *
4840560 CGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGC
195 CGACGATGGTGCCTCGGCGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCCGCATGTGCTGC
* * * *
4840625 CGCAACCCTCAGTCCAATCTCATCTTAGACAGGGAATGAACTCCGTATGCTTAGACTGGGAATGA
260 CGCAACCCTTAGTCCAGTCTCATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGA
** * * * * *
4840690 ACTTAGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGCACTCAGCCGGCTAGAAGG
325 ACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGC-GACGCTCAGCCGGCCAGAAGG
4840750 GTGGGATGCG
Statistics
Matches: 887, Mismatches: 33, Indels: 3
0.96 0.04 0.00
Matches are distributed among these distances:
538 841 0.95
539 46 0.05
ACGTcount: A:0.26, C:0.27, G:0.24, T:0.22
Consensus pattern (538 bp):
ATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGATTTCTCGAGGT
TTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTACCATCACCCATCGCACATCTTGTGCGCA
CACCCCCCTGGCCCCCCGATCGCCGGAACCATAATGCCGCCGGTCAGGTTTTTCGACGATGCTCC
GACGATGGTGCCTCGGCGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCCGCATGTGCTGCC
GCAACCCTTAGTCCAGTCTCATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAA
CTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGACGCTCAGCCGGCCAGAAGGAAGGGGA
TCGATCGGGTCCCCCTCTGCGTGCTACCGATCTTGCTTCCGTAACCCTCAGTCTGGTCTGATCTT
AGACTGTGAATAAACTCCATATGAAAAAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
CCCATTTCAGACACTTTA
Found at i:4840698 original size:26 final size:26
Alignment explanation
Indices: 4840648--4840700 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4840638 CCAATCTCAT
*
4840648 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
* *
4840674 CTTAGACTGGGAATGAACTTAGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
4840700 C
1 C
4840701 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.17, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCAGTATG
Found at i:4842048 original size:885 final size:891
Alignment explanation
Indices: 4840309--4842662 Score: 3151
Period size: 885 Copynumber: 2.6 Consensus size: 891
4840299 CCATATGAAA
*
4840309 AAAGGGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
4840374 TGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
* * *
4840439 GGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACTTCATATGCGTACACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCC
*
4840504 CGG-CCCCTCCGATCGTCGGATCCCCAATGCCGTCGGTCAGGTTCTCCAAGATGCTCCGACGATG
196 CGGCCCCCT-CGATCGTCGGATCCCCAATGCCGTCGGTCAGGTTCTCGAAGATGCTCCGACGATG
*
4840568 GTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCC
260 GTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * **
4840633 TCAGTCCAATCTCATCTTAGACAGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTAGTA
325 TCGGTCCAGTC-CATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * *
4840698 TGCCTAAGTCAACCCACGAAACGAGCATGCGGGCACTCAGCCGGCTAGAAGGG-TGGGATGCGCA
389 TGCCTAAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAAGGGCGGGGATGCGCA
* * * **
4840762 TGCTGGGGATCGGTCAGGTCCCCTCTGCGTGCTATCGATCCTACTACTGCAATCCTTGGTCCGGT
453 TGC--GGGAT--GTC--G-CCCCTCTGCATGCTATCGATCCTACTACCGCAACCCTCAGTCCGGT
*
4840827 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAGCGAGCGGGCGAGCGG
511 CTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAA--GA----GCGAGCGG
* ** *
4840892 GCGGGCGGGCGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGCCGTGGATCAATAGGGTGG
570 GCAGGCGGGCGGGCACTACCCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGG
4840957 TAGGTGGAATTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGCCCTATAAACTC
635 TAGGTGGAATTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGCCCTATAAACTC
* *
4841022 ATACAATGGTCACTTAAGCCTTCACGTGATGTTTCATGGCAAGACGATTCATTTTCTATTTTTCA
700 ATACAATGGTCACTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCA
*
4841087 TGATTTTTGAAACTTTTTGCGGTTCAGGATGTTTCAAAATTTTTTCAAAAAGTTTTTTGGCCCTA
765 TGATTTTTGAAACTTTTTGCGGTTCAGGATGTTTCAAAATTTTTCCAAAAAGTTTTTTGGCCCTA
4841152 AACTAGGTAGACGTGATCCTTGTATTTTTTTTGCCATGCACAAAAAAATTCAGCTAAAAACTC
830 AACTAGGTAGACGTGATCCTTGTA-TTTTTTTGCCATGCACAAAAAAATTCAGCTAAAAACTC
*
4841215 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTAC
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
4841280 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGATGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
* * *
4841345 GGATAGGGGGCCAATATAAGGGGCAAGTGCCAGCACCCATCGCACATCATGTTCGTACACCCCCC
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCC
* ** * ** **
4841410 CGGCCCCCTCAATCGTCGGATCCCCAATGCCACCGGTCACGTTCTCTGGTGATGCTCCGGTGATG
196 CGGCCCCCTCGATCGTCGGATCCCCAATGCCGTCGGTCAGGTTCTC-GAAGATGCTCCGACGATG
* * *
4841475 GTGCCTCGGTGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTTCCGCAACCC
260 GTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
** * * **
4841540 TCGGTCTGGTCCGATCTTATATTGGGAATGAACTCTATATGCTTAGACTGGGAATGAACTCCGTA
325 TCGGTCCAGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* *
4841605 TGCCTAAGTCAACCCACGAAATGAGCGTGCGGCGCTCAGTCGGCCAGAAGGGCGGGGAT-CG-AT
389 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAAGGGCGGGGATGCGCAT
* * * * *
4841668 -C-GG-T-TC-CCCCTCTGCATGCT-GCTGATCTTGCTGCCGCAACCCTCAGTCTGGTCTGATCT
454 GCGGGATGTCGCCCCTCTGCATGCTATC-GATCCTACTACCGCAACCCTCAGTCCGGTCTGATCT
* * * * *
4841727 TAGACTGTGAATGAACTCTATATGCCTAAGCCAATCGATGAA-A-CGAGCGGGCAGGTGGGCGGG
518 TAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAGAGCGAGCGGGCAGGCGGGCGGG
* * **
4841790 CACTACCCCGGCCAGAGAGACGGGTTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
583 CACTACCCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGAATTAG
*** * * * *
4841855 GCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAATGGTCCC
648 GCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGCCCTATAAACTCATACAATGGTCAC
* *
4841920 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTTGAAAC
713 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAAC
* * * * *
4841985 TTTTTGCGGTTC-GAGATTTTTTAAAATTTTTCCAGAAGGAG-TTTTTGTCCC-AAACTTGGTAG
778 TTTTTGCGGTTCAG-GATGTTTCAAAATTTTTCCA-AA-AAGTTTTTTGGCCCTAAACTAGGTAG
* *
4842047 ACGTGATCCTTGTATTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTC
840 ACGTGATCCTTGTATTTTTTTGCCATGCACAAAAAAATTCAGCTAAAAACTC
*
4842099 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
4842164 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTTATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
*
4842229 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCT
131 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCC-
* * * * * *
4842294 CCGGCCACAC-CGATCGTCGGAACCCCAATGCCGTCGATTAGGTTCTCCGACGATGCACCGACGA
195 CCGGCC-CCCTCGATCGTCGGATCCCCAATGCCGTCGGTCAGGTTCT-CGAAGATGCTCCGACGA
* * * *
4842358 TGGTGCCCCGGTGAAGAAAAATGTGGCACCAGAACAAGCCCGAGCCAAGCATGTGCTGCCGTAAC
258 TGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * ** **
4842423 CCTCGATCCCGTCCAATCTTAGACTAAGAATGAACTCCGCGTGCTTAGACTGGGAATGAACTCCG
323 CCTCGGTCCAGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * * *
4842488 TATGCCTAAGTCAACCCCCGAAACAAGCGTGTGGGTGCTCAGCCGGCCAGAGGGGC-GGGATGCG
387 TATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGCGCTCAGCCGGCCAGAAGGGCGGGGATGCG
* * * * * ** * * *
4842552 CAAGCCCTGGATCGGTCGGGTCCCTCTCTACCTACTGCCGATCTTACTGCCTCAACCCTC-GATC
451 CATG--CGGGAT--GTC--G-CCC-CTCTGCATGCTATCGATCCTACTACCGCAACCCTCAG-TC
* * *
4842616 TGGTCCGATCTTAGACTGGGAATGAACTCCCTATGCCTAAGCCAACC
507 CGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACC
4842663 AATGAAACGA
Statistics
Matches: 1275, Mismatches: 144, Indels: 64
0.86 0.10 0.04
Matches are distributed among these distances:
884 222 0.17
885 438 0.34
886 36 0.03
887 3 0.00
890 2 0.00
891 2 0.00
892 2 0.00
893 78 0.06
895 2 0.00
897 2 0.00
899 4 0.00
900 72 0.06
901 3 0.00
904 1 0.00
905 2 0.00
906 242 0.19
907 164 0.13
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (891 bp):
AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCC
CGGCCCCCTCGATCGTCGGATCCCCAATGCCGTCGGTCAGGTTCTCGAAGATGCTCCGACGATGG
TGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
CGGTCCAGTCCATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
CCTAAGTCAACCCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAAGGGCGGGGATGCGCATGC
GGGATGTCGCCCCTCTGCATGCTATCGATCCTACTACCGCAACCCTCAGTCCGGTCTGATCTTAG
ACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAGAGCGAGCGGGCAGGCGGGCGGGCAC
TACCCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGAATTAGGCA
CATCTTCATATTTCTACATGCCAATGCCATTTTTATGCCCTATAAACTCATACAATGGTCACTTA
AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTTT
TTGCGGTTCAGGATGTTTCAAAATTTTTCCAAAAAGTTTTTTGGCCCTAAACTAGGTAGACGTGA
TCCTTGTATTTTTTTGCCATGCACAAAAAAATTCAGCTAAAAACTC
Found at i:4843276 original size:26 final size:26
Alignment explanation
Indices: 4843247--4843296 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
4843237 GATCTTAGAT
4843247 TGGGAATGAACTCCGTATGCTTAAAC
1 TGGGAATGAACTCCGTATGCTTAAAC
*
4843273 TGGGAATGAACTCTGTATGCTTAA
1 TGGGAATGAACTCCGTATGCTTAA
4843297 GTCAACCCAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.16, G:0.24, T:0.30
Consensus pattern (26 bp):
TGGGAATGAACTCCGTATGCTTAAAC
Found at i:4844178 original size:26 final size:26
Alignment explanation
Indices: 4844149--4844198 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
4844139 GATCTTAGAT
4844149 TGGGAATGAACTCCGTATGCTTAAAC
1 TGGGAATGAACTCCGTATGCTTAAAC
*
4844175 TGGGAATGAACTCTGTATGCTTAA
1 TGGGAATGAACTCCGTATGCTTAA
4844199 GTCAACCCAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.16, G:0.24, T:0.30
Consensus pattern (26 bp):
TGGGAATGAACTCCGTATGCTTAAAC
Found at i:4844478 original size:902 final size:899
Alignment explanation
Indices: 4842736--4853231 Score: 12685
Period size: 875 Copynumber: 11.8 Consensus size: 899
4842726 GCCGTGGCAC
* * * * *
4842736 AAGTTTCATGGCAAGACGACTCATTTTCAATTTTTTACGATTTTTAAAACTTTTTACGGTTCAGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * *
4842801 ATTTTTTCAAATTCTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
4842866 TGTTGGAATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAA-CTTTTGTAACCATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * *
4842930 AAAAGTGTCCCCATTTCCGACACTTTAATGGCTACTGGCAACAAACTTCTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
4842995 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGTATAGGGGGCCAATATAAGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
*
4843060 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCTCCCCGATCGTCGGAACCCCAATAC
326 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC-CCCCGATCGTCGGAACCCCAATGC
** *
4843125 CGCCGGTCAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGAAACCAG
389 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAG
*
4843190 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGATTGGGAATG
454 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TTCGGTCTGATCTTAGACTGGGAATG
* * *
4843255 AACTCCGTATGCTTAAACTGGGAATGAACTCTGTATGCTTAAGTCAACCCACAAAACGAGCGTGC
518 AACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
** * *
4843320 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGATCGATCGACTCCCCTTTTGCGTAC
583 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGATCGATCGGGTCCCCTTCTGCGTGC
* * *
4843385 TGTCTATCTTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
648 TGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
4843450 CTAAGCCAACCGACGAAACGAGTGGGCAGGCGGGCAGGCGGGCACTACGTTGGCCAGAGAG-CTG
713 CTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGAC-G
* *
4843514 GGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGT
777 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGT
* * *
4843579 GCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGGTCTCTTAAGCCTTCATGTG
842 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* ** **
4843637 AAGTTTCATGGCAAAACGACTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTACGGTTCAAG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* *
4843702 ATTTGTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTAGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
4843767 TGTTGGCATGCATAAAACAATTCAGCCAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
4843832 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
4843897 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTTATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
*
4843962 CAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCTCCCCGATCGTCGGAACCCCAATAC
326 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC-CCCCGATCGTCGGAACCCCAATGC
** *
4844027 CGCCGGTCAGGTTCTCCGGCGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGCGAAACCAG
389 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAG
*
4844092 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGATTGGGAATG
454 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG-TTCGGTCTGATCTTAGACTGGGAATG
* * *
4844157 AACTCCGTATGCTTAAACTGGGAATGAACTCTGTATGCTTAAGTCAACCCACAAAACGAGCGTGC
518 AACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
** * *
4844222 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGATCGATCGACTCCCCTTTTGCGTAC
583 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGATCGATCGGGTCCCCTTCTGCGTGC
* * *
4844287 TGTCTATCTTGCTGCCGCAACCCTCGGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
648 TGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * *
4844352 CTAAGCCAACCGACGAAACGAGTGGGCAGGCGGGCAGGCGGGCACTACGTTGGCCAGAGAG-CTG
713 CTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGAC-G
* *
4844416 GGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGT
777 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGT
* * *
4844481 GCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGGTCTCTTAAGCCTTCATGTG
842 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* ** **
4844539 AAGTTTCATGGCAAAACGACTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTACGGTTCAAG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* *
4844604 ATTTGTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTAGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
4844669 TGTTGGCATGCATAAAACAATTCAGCCAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
4844734 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * **
4844799 CTTTAAGGGGGTGTGGGTTCTTC-AAGTTTGATGAGGGATAGGGGGTAAATATAAGGGCCAAGTA
261 CTTTAAGGGGGTGTGAGTTC-TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
4844863 CCAGCACCCATCGTACATCTTGTGCGCACACCCCCTAGCCCCCCCGATCGTCGGAACCTCAATGT
325 CCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGTCGGAACCCCAATGC
* ** * * * * * *
4844928 CGTCGGTCAGGTTCTCCGATGATGATCCAACGATGGTGGCCCGATGAAGAAAAATAC-ATTACCA
389 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGA-CACCA
** *
4844992 GCACATGCCCGAGCCCAGCATGTGCTGTGGTAA-CC-C--TC-G---G----T---C------TG
453 GCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTTCGGTCTGATCTTAGACTGGGAATG
* *
4845036 -A-TCCG-AT-CTTAGACTGGGAATGAACTAC-GTATGCCTAAGTCAACCCACAAAACGAGTGTG
518 AACTCCGTATGCTTAGACTGGGAATGAACT-CTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * *
4845096 CGGGCGCACAGCCGGCCAGAGGGGCGGGATACGCAAGTCGGGGATCCG-TCGAGTCCCCCTCTGC
582 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAG-C-CGGAT-CGATCGGGTCCCCTTCTGC
* * ** * *
4845160 GTGTTGCCGATCCTATTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAAATGAACTCTG
644 GTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG-AATGAACTCCG
* *
4845225 TATGCCTAAGCCAACCAACG-AACAAGC--G--GGCGGGCGGGCGGGCACTACGTCGGCCAGAGA
708 TATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGA
* * * *
4845285 GACGGGATGCACAAGTCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCC
773 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
4845350 GCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTATGACC-TCACATG
838 GCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTG
* ** * * * *
4845412 AAGTTTCATGGGAAGGTGACTCATTGTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * *
4845477 ATTTTTT-AAATTTTTTCGAAAGGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
4845541 TGTTGGCGTGCCCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGTTTTTGTGACCATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
4845606 AAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAATTGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * *
4845671 CTTTAAGGGGTTGTGTGTTCTCGAGGTTTGATGAGGGATA-GGGGCGAATATAAGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * * **
4845735 TAGCACCCATCACACATCATGTGTGCACACCCCCCGACCCCCCCGATCG-CTAAAACCCCAATGC
326 CAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCCCGATCGTC-GGAACCCCAATGC
* * * ** *
4845799 CGCCGGTCAGGTTCTCCGGTGATGCTCTGACGATGGTACCCCGGTGAAGAAAAATGTGACACCAG
389 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAG
* *
4845864 CACATTCCC-AGGCCCAGCATGTGCTGCCACAA--C-C---C--TC-GA---T---C------T-
454 CACATGCCCGA-GCCCAGCATGTGCTGCCGCAACCCTCGTTCGGTCTGATCTTAGACTGGGAATG
*
4845906 AA-TCCG-AT-CTTAGACTGGGAATGAACTCCT-TATGCCTAGGTCAACCCACGAAACGAGCGTG
518 AACTCCGTATGCTTAGACTGGGAATGAACT-CTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
** * * *
4845967 CGGGCGCTCAGCTAGCCAGA-GGGCTGGGATGCGCAAGCCGATGATCGGTTGGGTCCCGC-TCTG
582 CGGGCGCTCAGCCGGCCAGAGGGGC-GGGATGCACAAGCCG--GATCGATCGGGTCCC-CTTCTG
** * * ** * * * * **
4846030 CGTGCTACCGATCCTACTACCGCAATGCTTGGTCTGGTCTAATCTTACACAAGGAATGAACTCCG
643 CGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCG
* * * * ** *
4846095 TATGCTTGAGCCAACAGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCATTACACCGACCAGAGA
708 TATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGA
* * *
4846160 GACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGAACATCTTCATATTCCT
773 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* *
4846225 GTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACC-TCACATG
838 GCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTG
* * * * * *
4846287 AAGTTTCAT-GCGAAGATGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGA
1 AAGTTTCATGGC-AAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGG
* *
4846351 GATTTTTT-AAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
65 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
4846415 TTGTTGGCGTGCACAAAAAAATTCAGCTAAAAACTC-AGAGTGTATAAGTTTTTGTGACCATTTG
130 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA-AGTGTACAAGATTTTGTGACCATTTG
* * *
4846479 AAAAAAATGTCCCCATTTCAGACACTTTAATAGCTATTGGCAGCAAACCTGTAAAATCTCAAATG
194 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * * *
4846544 CTCTTTAAGGGTGAGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGACAATATAACGGCCAAGT
259 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * *
4846609 ACCAGCACCCATCACGCATCATGTGCACACACCCCTCGGCCCCTCCGATCGT-GGAAACCCCAAT
324 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCGATCGTCGG-AACCCCAAT
* * *
4846673 GCCGTCGGTCAGG---T-------T-CTCCGACGATGGTGCCCC-AGTGAAGAAAAATGTTG-CA
387 GCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATG-CGACA
* ** * * * *
4846725 CCAGCACATGGCCGAGCCCAATATGTGCGGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGG
450 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTTCGGTCTGATCTTAGACTGGG
* * * *
4846790 AATGAACTCCATATGCTTAGACTAGGAATGAACTCCT-TATTCCTAAGTCAACCCACGAAACAAG
514 AATGAACTCCGTATGCTTAGACTGGGAATGAACT-CTGTATGCCTAAGTCAACCCACGAAACGAG
* * ** * * **
4846854 CGTGAGAGCGCTCAGCCAACCAGAGGGGTGGGATG-AGCAAGCCAGAGATTGATCGGGTCCCCCA
578 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCA-CAAGCC-G-GATCGATCGGGTCCCCTT
* * * * * * *
4846918 CTGTGTGCTGCCGATCCTACTGCCGTAACCCTCGGTCCGGTCTGATCTTACACT-AGATTGAACT
640 CTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACT
* * * * *
4846982 TCGTATGCCTAAGCCAACTGATGAAATGAGCGGG-AGGGCGGACGGGCGGGCACTACGTCGGCCA
705 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCA-GGCGGGCGGGCGGGCACTACGTCGGCCA
* * *
4847046 GAGAGACGGGATGCGCAAGCCATAGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATAT
769 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
*
4847111 TTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
834 TTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
4847176 G
899 G
* * * *
4847177 AAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACAGTTTGGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * *
4847242 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
4847307 TTTTGGCATGCATAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
4847372 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
4847437 CTTTAA-GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATACGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * *
4847501 CAGCACCCATCGCACATCATGTGCGCATACCCCTCGGCCCCCCGATTGTCGGAACCCCAACGCCG
326 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCG
* * * *
4847566 CCGGTCAGGTTCTCCGGTGATGCTCCGACGACGGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
391 CCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCA
* * *
4847631 CATG-CCGAAGCCCAGCATATGCTACCACAA-CC-C--TC-G-C---TC-----C---G---G--
456 CATGCCCG-AGCCCAGCATGTGCTGCCGCAACCCTCGTTCGGTCTGATCTTAGACTGGGAATGAA
* * * *
4847673 -TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAGCGACGAAACTAGCGTGCGG
520 CTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * ** * * * * *
4847735 GCGCTCAGTCGGCTAGAGGGGTAGGATGCACAAACCGGGGATCGGTCGGGTCCCTTTTTACGTGC
585 GCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCC--GGATCGATCGGGTCCCCTTCTGCGTGC
* * * * * * *
4847800 TGTCGATCTTGCTACCACAACCCTCGGTCTGATCTGATCTTAGACTGGGAATCAACTCTGTATGC
648 TGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * * * *
4847865 CTAAGCCAATCGAAGAAACGAGCGGGCGGGCGGGCGGGCGGGCGCTACGTCAGCTAGAGAGACCG
713 CTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGG
* * *
4847930 GATGCGCAAGCCGTGGATCGATAGTGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTGTGTG
778 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
*
4847995 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTG
843 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * *
4848052 AAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACAGTTTGGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * * *
4848117 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGCCCCACACTTGGTAGACATGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
4848182 TTTTGGCATGCATAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
4848247 AAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
4848312 CTTTAA-GGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATACGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * *
4848376 CAGCACCCATTGCACATCATGTGCGCACACCCCCCGGTCCCTCGATCGTCGGAACCCCAACGCCG
326 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCG
* ** * *
4848441 CCGGTCAGGTTCTCCGGTGATGCTCCGACGACAGTGCCCCGACAAAGAAAAATGCGGCACCAGCA
391 CCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCA
* * * *
4848506 CATGCCCAAGCCCAGCATATGCTACCACAA--C-C---C--TC-G--CTT---C---G---G---
456 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTTCGGTCTGATCTTAGACTGGGAATGAAC
* * * *
4848548 TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAACCACGAAACTAGCGTACGGG
521 TCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
* * * * ** * *
4848611 CGCTCAGTCGGCTAGAGGGCCAGGATGCACAAGCCGGGGATC-AGTCGGGTCCTTTTTTACGTGC
586 CGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCC--GGATCGA-TCGGGTCCCCTTCTGCGTGC
* * * * *
4848675 TGTCGATCTTGCTACCGCAACACTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGC
648 TGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
4848740 CCAAGCCAACCGGCGAAACGAGC--G--GGCGGGCGGGTGGGCACTACGTCGGCTAGAGAGACCG
713 CTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGG
* * * *
4848801 GATGTGCAAGCCGTGGATCGATAAGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTGTGTG
778 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
*
4848866 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTG
843 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * ** * * *
4848923 AAGTTTGATGGAAAGACGACTCATTTTCTATTTTTCACAATTTTTGAAACTTTTTATGGTTTGGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * * * *
4848988 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAGCCTGGTAGACATGATCCTTATATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
4849053 TGTTGGCATGTACAAAAAAATTCAGCTAAAATCTCCAAGTGTACAAGATTTTGTGACCATTCGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * *
4849118 AAAAGTGTCCCAATTTCAGACACTTTAATTGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* *
4849183 CTTTAAGGGAGTGTGAGTTGTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * ** *
4849248 TAGCACCCATCGCACATCATGTGCGCACACCCCCCCGACCCCCCCGATCACCGGAACACCAATGC
326 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGC
* * * *
4849313 CACTGGTCAGGTTCT-C--CG--G-T-----GATGGTGCCCCGACGAAGAAAAATGTGGCACCAG
389 CGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAG
* * *
4849367 CACATGCCCGAGCCCAGCATGTGCTGCCGCAATCCTCGGTCCGGTCCGATCTTAGACTGGGAATG
454 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTTCGGTCTGATCTTAGACTGGGAATG
** *
4849432 AACTTTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
518 AACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * *
4849497 GGGTGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGACCGGGTCCCC--CT-C-T
583 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCC--GGATCGATCGGGTCCCCTTCTGCGT
* * *
4849558 AC-GT-G-T--TG--GCAC-C-ACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTCC-TA
646 GCTGTCGATCCTGCTGC-CGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
* *
4849613 TGCCTAAGCCAACCGACGAAACGAGC-GG-A--CGGACGGGCGGGCACTACGCCGGCCAGAGAGA
710 TGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGA
* * *
4849674 CGGGATACGCAAGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTAC
775 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
4849739 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCACGTT
840 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * **
4849799 AAGTTTCATGGCAAGACGACTCGTTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGATTTTG
1 AAGTTTCATGGCAAGACGACTCG-TTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGG
* * *
4849864 GATTTTTTAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAACTTGGTAGACTTGATCCTTGTATTT
65 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
4849929 TTGTTGGCATTCACAAAAAAATTCAGCTACAAACTCGAGGTTTACAAGATTTTGTGACCATTTGA
130 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * *
4849994 AAAACGTTTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATAC
195 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
*
4850059 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAGGGGCCAAGTA
260 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
4850124 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCCGGCCCTCCGATCATCGAAACCCCAATGCC
325 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCC
* * * * * * *
4850188 GCCGGTCAGGTTCTCCGGTGATGCTCCGACAACGGTGCCCCGGCAAAGAAAAATGTGGCACCAGC
390 GCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGC
* * * * * * *
4850253 GCATGCCCGAGCCCAACATATGCTACCACAACCCTCGGTCCGATCTGATCTTAGACTGGGAATGA
455 ACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GTTCGGTCTGATCTTAGACTGGGAATGA
* * **
4850318 ACTCCGTATGCTTAGACTGGGAATGAACT-TCGTATGCCTACGTCAACCCACGAAACTAGCGTAT
519 ACTCCGTATGCTTAGACTGGGAATGAACTCT-GTATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * *
4850382 GGGTGCTCAGCCGACTAGAGGGGTGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCTTTTGCGT
583 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCC--GGATCGATCGGGTCCCCTTCTGCGT
* * * * * * * *
4850447 GCTCTTGATCCTGCTACCGCAACCCTCAGTCTGATCCGATCTTAGTCTGGGAATGAACTCCGTAT
646 GCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
4850512 GCCTAAGCCAATCGATGAAACGAGC--G--GGCGGGCGAGCGGGCACTACGTCGGCCAGAGAGAC
711 GCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGAC
* * * *
4850573 CGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACT
776 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCG
* *
4850638 TGCCAATGCCATTTTTATGGTTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTG
841 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * ** * *
4850697 AAGTTTCATGGAAAGATGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * * *
4850762 ATTTTTTAAAATTTTTTCGGAAGGATTTTTAGCCCCAAGCCTGGTAGACGTGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
4850827 TGTTGGCATGCACAAAAAAATTCAGCT-AAAACTCGAAGTGTACAAGATTCTGTGACGATTTGAA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
4850891 AAAAGTCTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
196 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
4850956 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGGGGGATAGGGGGCCAATATAAGGGCCAAGTAC
261 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * *
4851021 TAGCACCCATCGCAGATCATGTGCGCACACCCCCCGGCCCCCTGATCATCGGAACCCCAATGCCG
326 CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCG
* * * * * *
4851086 CCGGCCAGGTTCTCCAGCGATGCTCTGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCA
391 CCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCA
* * * * * *
4851151 CATGCTCGAGCCTAACATGTGCTGCCACAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAA
456 CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTTC-GGTCTGATCTTAGACTGGGAATGAA
4851216 CTCCGTATGCTTAGACTGGGAATGAACATCCGATGTTAGACTTGGAATGAACTCCGTATGCCTAA
520 CTCCGTATGCTTAGACT-GG---G---A----ATG--A-AC------T---CT--GTATGCCTAA
* * * * * *
4851281 GTCAACCTACGAAACGAGCGTGCGGACGCTCAGCCTGCCAGAGGGGTGGGTTGCACAAGTCGGGG
560 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAG-C-CGG
* * * * * * * **
4851346 ATCAATTGGGTACCCC-TCTGTGTGCTGTCGATCCTACTGCCACAACCCTCGATTCGGTCCAATC
623 ATCGATCGGGT-CCCCTTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATC
* * * *
4851410 TTAGACTGGGAATGAACTTCGTATGCCGAA-CCAACCGATGAAACGAGCGGGTGGGAGGGCGGGC
687 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-GGCA-GGCGGGC
* * *
4851474 GGGCGAGCACTACGCCGGCCAGAGAAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
748 GGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
4851539 GGTTTAGCCACATCTTCATATTTGTGCGTGCCAATGCCATTTTTATGGGTTGTAAATTCATACAA
813 GGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
*
4851604 TGGTCCCTTAGGCCTTCACGTG
878 TGGTCCCTTAAGCCTTCACGTG
* * *
4851626 AAGTTTCATGGCAAGATGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* *
4851691 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGAAGACGTGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
*
4851756 T-TTCGGCATGCACAAAAAAATAT-AGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
131 TGTT-GGCATGCACAAAAAAAT-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * * *
4851819 AAAAAAATGTCCCCATTTTA-AGCACTTTAATGGCTACTGGTAGCACACCTGTAAAATCCCAAAT
194 AAAAAAGTGTCCCCATTTCAGA-CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
*
4851883 GCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
258 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * *
4851948 TACCAGCACCCATCGCACATCATGTGGGCACACCCCCCCGACCGCCTCAATCGTCGGAACCCCAA
323 TACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC-CCCCGATCGTCGGAACCCCAA
* * * * * * * *
4852013 TGTCGCCGGTCATGTTCTCCGACGATGCTCCAACGATTGTGCCACGATGAAGAAAAATAC-AGCA
386 TGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGA-CA
* * * * * * *
4852077 CCAGCAGATG-CCGAGCCAAGCATCTGCTGTCGTAACCCTCGGTCTGGTCTGATCTTAAACTGGG
450 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTTC-GGTCTGATCTTAGACTGGG
* * *
4852141 AATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAACGAGC
514 AATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * ** * *
4852206 ATGCGGGCGCTCAGCAGGCCAGAAGGGCGGGATGCGCAAGCTGGGGATCGGCCGGGTCCCC-CCC
579 GTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGC--CGGATCGATCGGGTCCCCTTCT
* ** * * * * * * * *
4852270 GCTTGCTACCAATCCTACTACTGCAACCTTCGGTCTGGTTTGATTTTAGACTGGGAATGAACTCC
642 GCGTGCTGTCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
* *
4852335 GTATGCCTAAGCCAACCGAC-AAA--A---TG-A-----GCGGGCGGGCACTACGCCGGCCAGAG
707 GTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAG
* * * *
4852388 AGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTTATATTTA
772 AGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * *
4852453 TGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTG
837 TGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* **
4852516 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGTGGTTCGGG
1 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
* * * *
4852581 ATTTTTAAAAATTTTTTCGGAAGGTGTTGTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
66 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
4852646 TGTTGGCATGCACAAAAAAATTCAGCT-AAAACTCGAAGTGTACAAGATTTTGTGACCATTTTGA
131 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA-TTTGA
* *
4852710 AAAAAGTGTCCCGATTTCAAGACACTTTAATGGCTACTGGTAGCAAACCTGT-AAATCTCAAATG
195 AAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
4852774 CTCTTTAAGGGGGTGTGAGTTCTCGAGG-TTGATGA-GGATA-GGGGCCAATATAAGGGTCGAGT
259 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * **
4852836 ACCAACACCCATCGCACATCATGTGCGCACACCCCCCTGACCCCCCCGATCACCGGAACCCCAAT
324 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-G-GCCCCCCGATCGTCGGAACCCCAAT
* * * *
4852901 GCCGTCGATCAGGTT-TCCAGCGATGCTTCGACGATGGTGCCCCGACGAAGAAAAAATGC-AGCA
387 GCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAG-AAAAATGCGA-CA
* * * * *
4852964 CCAGCACATGGCCGAGCCTAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGG
450 CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTTC-GGTCTGATCTTAGACTGGG
* * * * * **
4853029 AATGTAACTCCGTATGCTTTAGACTAGGAATTAACTCCGTATGCCTAAGACAACCCATGAAATTA
514 AATG-AACTCCGTATGC-TTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGA
* ** ** * *
4853094 GCGTGCGGGTGCTCAGCCGGCCAGAGGGGTAGGATGCGTAAGCTGGGGATCG-GCTGGGTCCCAC
577 GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGC--CGGATCGATC-GGGTCCC-C
* ** * * * * *
4853158 -TCTGTGTGCTACCGATCCTACTACCGTAACCCAT-GGTCCGGTCCGATCATAGACTGGGAATGA
638 TTCTGCGTGCTGTCGATCCTGCTGCCGCAACCC-TCGGTCCGGTCTGATCTTAGACTGGGAATGA
* *
4853221 AATCCATATGC
702 ACTCCGTATGC
4853232 TTAGATTGGG
Statistics
Matches: 8512, Mismatches: 859, Indels: 458
0.87 0.09 0.05
Matches are distributed among these distances:
863 58 0.01
865 59 0.01
866 5 0.00
867 1 0.00
868 2 0.00
869 3 0.00
870 40 0.00
871 692 0.08
872 292 0.03
873 217 0.03
874 206 0.02
875 1377 0.16
876 277 0.03
877 407 0.05
878 36 0.00
879 5 0.00
880 3 0.00
881 2 0.00
882 2 0.00
883 1 0.00
884 3 0.00
885 197 0.02
886 35 0.00
887 104 0.01
888 66 0.01
889 183 0.02
890 771 0.09
891 404 0.05
892 10 0.00
893 1 0.00
894 3 0.00
895 3 0.00
896 191 0.02
897 316 0.04
898 195 0.02
899 8 0.00
900 58 0.01
901 268 0.03
902 1063 0.12
903 3 0.00
904 1 0.00
905 66 0.01
906 78 0.01
908 4 0.00
910 1 0.00
911 3 0.00
917 3 0.00
918 1 0.00
920 3 0.00
921 18 0.00
922 131 0.02
923 5 0.00
924 1 0.00
926 1 0.00
927 1 0.00
928 2 0.00
929 290 0.03
930 183 0.02
931 76 0.01
932 77 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTTCGGG
ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
CAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCG
CCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCA
CATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGTTCGGTCTGATCTTAGACTGGGAATGAAC
TCCGTATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
CGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGATCGATCGGGTCCCCTTCTGCGTGCTGT
CGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTA
AGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGAT
GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCA
ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
Found at i:4849467 original size:26 final size:26
Alignment explanation
Indices: 4849417--4849469 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4849407 CCGGTCCGAT
**
4849417 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4849443 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4849469 C
1 C
4849470 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4850331 original size:26 final size:26
Alignment explanation
Indices: 4850302--4850354 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4850292 CCGATCTGAT
4850302 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4850328 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4850354 C
1 C
4850355 CTACGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4851262 original size:25 final size:26
Alignment explanation
Indices: 4851199--4851276 Score: 124
Period size: 26 Copynumber: 3.0 Consensus size: 26
4851189 CTGATCTGAT
4851199 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4851225 CTTAGACTGGGAATGAACATCCG-ATG
1 CTTAGACTGGGAATGAAC-TCCGTATG
*
4851251 -TTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4851276 C
1 C
4851277 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 1, Indels: 6
0.87 0.02 0.11
Matches are distributed among these distances:
24 4 0.08
25 19 0.40
26 21 0.44
27 4 0.08
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4853071 original size:27 final size:28
Alignment explanation
Indices: 4853019--4853072 Score: 92
Period size: 27 Copynumber: 2.0 Consensus size: 28
4853009 TGGTCCGATC
*
4853019 TTAGACTGGGAATGTAACTCCGTATGCT
1 TTAGACTAGGAATGTAACTCCGTATGCT
4853047 TTAGACTAGGAAT-TAACTCCGTATGC
1 TTAGACTAGGAATGTAACTCCGTATGC
4853073 CTAAGACAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
27 13 0.52
28 12 0.48
ACGTcount: A:0.28, C:0.19, G:0.22, T:0.31
Consensus pattern (28 bp):
TTAGACTAGGAATGTAACTCCGTATGCT
Found at i:4853079 original size:27 final size:28
Alignment explanation
Indices: 4853021--4853079 Score: 84
Period size: 27 Copynumber: 2.1 Consensus size: 28
4853011 GTCCGATCTT
* * *
4853021 AGACTGGGAATGTAACTCCGTATGCTTT
1 AGACTAGGAATGTAACTCCGTATGCCTA
4853049 AGACTAGGAAT-TAACTCCGTATGCCTA
1 AGACTAGGAATGTAACTCCGTATGCCTA
4853076 AGAC
1 AGAC
4853080 AACCCATGAA
Statistics
Matches: 28, Mismatches: 3, Indels: 1
0.88 0.09 0.03
Matches are distributed among these distances:
27 18 0.64
28 10 0.36
ACGTcount: A:0.31, C:0.20, G:0.22, T:0.27
Consensus pattern (28 bp):
AGACTAGGAATGTAACTCCGTATGCCTA
Found at i:4853243 original size:26 final size:26
Alignment explanation
Indices: 4853207--4853257 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
4853197 GGTCCGATCA
4853207 TAGACTGGGAATGAAATCCATATGCT
1 TAGACTGGGAATGAAATCCATATGCT
* * *
4853233 TAGATTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAAATCCATATGC
4853258 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.16, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAAATCCATATGCT
Found at i:4853336 original size:185 final size:186
Alignment explanation
Indices: 4852995--4853406 Score: 544
Period size: 185 Copynumber: 2.2 Consensus size: 186
4852985 CATGTGCTGT
* * *
4852995 CGCAACCC-TCGGTCTGGTCCGATCTTAGACTGGGAATGTAACTCCGTATGCTTTAGACTAGGAA
1 CGCAACCCAT-GGTCCGGTCCGATCTTAGACTGGGAATG-AAATCCATATGCTTTAGACTAGGAA
* ** * * *
4853059 TTAACTCCGTATGCCTAAGACAACCCATGAAATTAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGT
64 TGAACTCCGTATGCCTAAGACAACCCATGAAACGAGCATGCGGGTGCTCAGCCGGCCAGACGGGA
** * *
4853124 AGGATGCGTAAGCTGGGGATCGGCTGGGTCC-CACTCTGTGTGCTACCGATCCTACTAC
129 AGGATGCACAAGCCGAGGATCGGCTGGGTCCAC-CTCTGTGTGCTACCGATCCTACTAC
* * * *
4853182 CGTAACCCATGGTCCGGTCCGATCATAGACTGGGAATGAAATCCATATGC-TTAGATTGGGAATG
1 CGCAACCCATGGTCCGGTCCGATCTTAGACTGGGAATGAAATCCATATGCTTTAGACTAGGAATG
* *
4853246 AACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATGCGGGCT-CTCAGTCGGCCAGACGGGAA
66 AACTCCGTATGCCTAAGACAACCCATGAAACGAGCATGCGGG-TGCTCAGCCGGCCAGACGGGAA
* ** *
4853310 GGATGCACAAGCCGAGGATTGGCTGGGTCCACCTCTGTGTGCTGTCGATCCTACTGC
130 GGATGCACAAGCCGAGGATCGGCTGGGTCCACCTCTGTGTGCTACCGATCCTACTAC
*
4853367 CGCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAA
1 CGCAACCCATGGTCCGGTCCGATCTTAGACTGGGAATGAA
4853407 CTCTGTATGC
Statistics
Matches: 196, Mismatches: 26, Indels: 8
0.85 0.11 0.03
Matches are distributed among these distances:
185 150 0.77
186 12 0.06
187 33 0.17
188 1 0.01
ACGTcount: A:0.23, C:0.26, G:0.28, T:0.23
Consensus pattern (186 bp):
CGCAACCCATGGTCCGGTCCGATCTTAGACTGGGAATGAAATCCATATGCTTTAGACTAGGAATG
AACTCCGTATGCCTAAGACAACCCATGAAACGAGCATGCGGGTGCTCAGCCGGCCAGACGGGAAG
GATGCACAAGCCGAGGATCGGCTGGGTCCACCTCTGTGTGCTACCGATCCTACTAC
Found at i:4855398 original size:26 final size:26
Alignment explanation
Indices: 4855362--4855414 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4855352 CCAGTCCGAT
*
4855362 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4855388 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4855414 C
1 C
4855415 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4856670 original size:874 final size:875
Alignment explanation
Indices: 4854589--4857179 Score: 3346
Period size: 874 Copynumber: 2.9 Consensus size: 875
4854579 GCGTAAGTCA
* * **** * * * * * *
4854589 GGGATCGACCGGGTCCCCCTCTGCGGGCCATTGATCCTGCTACTGTAACCCTTGGTCTAGTTCAA
1 GGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGA
* *
4854654 TCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGACGGGCGG
66 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGG
* * * * *
4854719 GCGGGCACTACGCCTGCCAGAGAGACGGGATGCACAAGCCGTAGATCGATAGGGTGGTAGGTGAG
131 GCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*** * *
4854784 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCAATTTTTATGGCTTGTAACTTCATACAATG
196 TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * * *
4854849 GTGCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGACTCG-TTTCTATTTTTTATGATTTTT
261 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * *
4854913 GAAA-TGTTTTGTGGTTC-AGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTTG
326 GAAACT-TTTTGCGGTTCGA-GATTTTTTAAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
* ** * *
4854976 GTAGACGTGATCCTTGTATTTTTGTTGATAGGCATAAAAAAATTCAGCTAAAAACTCGAAGCGTA
389 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTA
*
4855041 CAAGATTTTGTGA-CATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCA
454 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
4855105 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTGGATGAGGGATAGGG
519 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * **
4855170 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATTATGGGTGCACACCCCCCACCCCACC
584 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GGCC-CC
* * *
4855235 CCCGATCGTCGGAACTCCAATGCCACCAGTCAGG---T-------T-CTCCGGCGATGGTGCCCC
647 CCCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCC
* ** * *
4855289 GGCAAAGAAAAATGCAGCACCAGCACATGTCCGAGCCCAGCATGTGCTGCCGTAACCCTTGGTCC
712 GGCGAAGAAAAATGTGGCACCAGCACATCT-CGAGCCCAGCATGTGCT-CTGTAACCC----T-C
*
4855354 AGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGATTGGGAATGAACTCCGTATGCCTAA
770 -G---G-TC-----C------TG---TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
4855419 GTCAACCCACGAAACGAGCATGAGGGCACTCAACCGGCCAGAGGGGTGGGATGCGCAAGCCG
814 GTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGAGTGGGATGCACAAGCCG
* * * * *
4855481 GGGATCGATCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTACCACAACCCTCGGTC-GGGTCTA
1 GGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGA
*
4855545 TTCTTAGACTGGGAATGAACTCTGTATGCCTAAGGCAACCGACGAAACGAGCGGGCGGACGGGCG
66 -TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCG
* * * *
4855610 GGCGGGCACTACTCCGGCCAGAGAGACGGTATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGG
130 GGCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* ** *
4855675 GTTTAGGCACATCTTCATATTTCTACGTGCCAACACCTTTTTTATGGCTTGTAAATTCATACAAT
195 GTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
4855740 GGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
260 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
4855805 TAAAACTTTTTGTGGTTCGAGATTTTTTAAAAAATTTTTGGAAAGAGTTTTGGCCCCAAACTTGG
325 TGAAACTTTTTGCGGTTCGAGATTTTTTAAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGG
* * * * * *
4855870 TAGACGTGATCCTTGTATTTTTTTTAGCATGCTCAAAACAATTCAACTAAAAACTCGAAGTGAAC
390 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTAC
*
4855935 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGCTACTGGCAGCAA
455 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
4856000 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
520 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * *
4856065 GCCAATATAAGGGCAAAGTACCAGCACCCATCACACATCATGTGCACACACCCCCCAGCCCCCTC
585 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* * * * *
4856130 GATCGTCGGAACCCCAATGTCGCCGGTCAGGTTCCCCGGCGATGCTCCGGCGATGGTGCCCCGAC
650 GATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGC
* * *
4856195 GAAGAAAAATGTGGCACCAGCACATCTCAAGCCCAGAATGTGCTACTGCAACCCTCGGTCCTGTC
715 GAAGAAAAATGTGGCACCAGCACATCTCGAGCCCAGCATGTGCT-CTGTAACCCTCGGTCCTGTC
* * * *
4856260 TGATCTTAGACTGGAAATGAACTCTGTACGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTT
779 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
*
4856325 CAGCCGGCC-GAGGAGTGGGATGCACAAGTCG
844 CAGCCGGCCAGAGGAGTGGGATGCACAAGCCG
* * * *
4856356 GGGATCGGTCGGGTCCTCCTCTGCGTGCTGCCGATCCTACTGCCGCAACCCTCGGTCTGGTTTGA
1 GGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGA
* * * * *
4856421 TCTTAGACTGGGAATGAACTCTGTATACCTAACCCAACCGACGAAATGAGCGGGCGG-TGGGTGG
66 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGG
* * * * *
4856485 GCAGGCACTACGCCAGCTAGAGAGACGGGATGTGCAAGCTGTGGATCGATAGGGTGGTAGCTGGG
131 GCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * *
4856550 TTTAGGCACATCTTCATATTTCTATGTACCATTGCCTTTTTTATGGCTTGTACATTCATACAATG
196 TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* *
4856615 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTTCACGATTTTT
261 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * * *
4856680 GAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGATTTTTGGCCCCAAACTTGGT
326 GAAACTTTTTGCGGTTCGAGATTTTTTAAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
* *
4856745 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACA
391 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACA
*
4856810 AGATTTTGTGACCATTTGAAAATAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
456 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
4856875 CCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGATGGATAAGGGG
521 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
4856940 CCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
586 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCC
* ** ** * *
4857005 GATCGCCGAAACCGTAATGCTGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGT
650 GATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGC
* * * * * *
4857070 GATGAAAAATGTGGCACCAGCACATGTCCGAGCCTAGCATGTGCTGCCGTAACCCTTGGTCCGGT
715 GAAGAAAAATGTGGCACCAGCACATCT-CGAGCCCAGCATGTGCT-CTGTAACCCTCGGTCCTGT
* * *
4857135 CCGATCTTAGACTGGGAGTGAACTCCGTATGCCTAACTCAACCCA
778 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
4857180 TGAGATGCGT
Statistics
Matches: 1508, Mismatches: 172, Indels: 54
0.87 0.10 0.03
Matches are distributed among these distances:
874 472 0.31
875 216 0.14
876 133 0.09
877 2 0.00
878 4 0.00
881 2 0.00
887 1 0.00
891 4 0.00
892 296 0.20
893 144 0.10
894 165 0.11
896 1 0.00
897 1 0.00
898 1 0.00
902 23 0.02
903 43 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (875 bp):
GGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCTGGTTCGA
TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGACGGGCGG
GCAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
GAAACTTTTTGCGGTTCGAGATTTTTTAAAAATTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGT
AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
ATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCG
AAGAAAAATGTGGCACCAGCACATCTCGAGCCCAGCATGTGCTCTGTAACCCTCGGTCCTGTCTG
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
GCCGGCCAGAGGAGTGGGATGCACAAGCCG
Found at i:4858016 original size:26 final size:26
Alignment explanation
Indices: 4857980--4858032 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4857970 CTGATCCGAT
*
4857980 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4858006 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4858032 C
1 C
4858033 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4858906 original size:26 final size:26
Alignment explanation
Indices: 4858877--4858929 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4858867 CCGGTCTGAT
*
4858877 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4858903 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4858929 C
1 C
4858930 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4859397 original size:899 final size:893
Alignment explanation
Indices: 4857194--4859660 Score: 3529
Period size: 896 Copynumber: 2.7 Consensus size: 893
4857184 ATGCGTAAGT
** * * * *
4857194 CAGGGATCGACCGGGTCCCCCTCTGCGTGCCACTGATCCTGCTACTGCAACCCTTGGTCTGGT-T
1 CAGGGATC-ACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCGCAACCCTTGGTCTGGTGT
* * * *
4857258 CAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAATGAAATGAGCGGGCGGACGGG
65 -GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG-CGGG
* *
4857323 CGGGCGGGTACTACGCCTGCCAGAGAGACGGGATGC-ACAAGCCGTAGATCGATAGGGTGGTAGG
128 CGAGC----ACTACGCC-GCCAGAGAGACGGGATGCGA-AAGCCGTGGATCGATAGGGTGGTAGG
* * *
4857387 TCGATTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAACTTCATAC
187 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* * *
4857452 AATGGTGCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGAT
252 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * *
4857517 TTTCGAAA-TGTTTTGTGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAAC
317 TTT-GAAACT-TTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * * * *
4857581 TTGGTAGACGTGATCCTTGTATTCTTTTTGACAGGCATAAAAAAATTCAGCTAAAAACTCAAAGC
380 TTAGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGC
4857646 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCTAGACACTTTAATGGCTACTGGC
445 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGC
* * *
4857710 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTGAGGTTGGATGAGGGAT
509 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
*
4857775 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCGGCC
574 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
* * * * * **
4857840 CCCCCGATCGCCGGAACCCCAATCCTACCAATCAGGTTTTTCGGTGATGCTCCATTGATGGTGCC
639 CCCCCGATCG-CGAAACCCCAATCCTACCAATCAGGTTCTCCAGCGATGCTCCAGCGATGGTGCC
* * * *
4857905 TCGGCAAAGAAAAATGTGGCACCAGCACATGCTCGAGCCTAGCATGTGCTGTCGTAACCCTCGGT
703 TCGACAAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGCAACCCTCGGT
*
4857970 CTGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
768 CCGATCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * *
4858035 AAGTCAACCAACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGCAGGGTGGGATACATAAC
833 AAGTCAACCAACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGCAGGGCGGGATACACAAC
* *** * * * *
4858096 CGGGGATCGGTGGGT-CCCCTCTACGTGCTGCCGATCTTGCTGCCGCAACCATTGGTCTTGTGCG
1 CAGGGATCACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCGCAACCCTTGGTCTGGTGTG
* *
4858160 GTCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGAGC-
66 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC-GGCGGGCG
* *
4858224 AGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTGGGTGGGTT
130 A-GCACTACGCC-GCCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * *
4858289 TAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGGTTTTAAATTCATACAATGGT
193 TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * *
4858354 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTGTTTTTCATGATTTTTGA
258 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTGA
*
4858419 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGTCCCAAACTTAGTAG
322 AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAG
* * * *
4858484 ACATGATCCTTGTATTTTTTTTGGCTTGCACAAAAAAAGTCAGCTAAAAACTCGAAGTGTACAAG
387 ACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAG
* *
4858549 ATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACT
452 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
4858614 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
517 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
4858679 AATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA
582 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCGA
* * ** * * *
4858744 TCGTCGAAACCCCAATGGC-ATCGGTCAGGTTCTCCAGCGATGCTCCGGCGATGGTGCTTCGACG
646 TCG-CGAAACCCCAAT-CCTACCAATCAGGTTCTCCAGCGATGCTCCAGCGATGGTGCCTCGACA
* * * *
4858808 AAGAAAAATGCGGCACCAGCTCATGC-CTGAGCCCAGCTTGTGCTGTCGCCACCCTCGGTCCGGT
709 AAGAAAAATGCGGCACCAGCACATGCTC-GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGAT
*
4858872 CTGATCTTAGACTGGGAATGAAC-TCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
773 CCGATCTTAGACTGGGAATGAACTTC-GTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
4858936 CAACCTACGAAATGAACGTGCGGGCGCTCAGCTGGCCAG-AGGGGCGGGATGCACAAGC
837 CAACCAACGAAACGAACGTGCGGGCGCTCAGCCGGCCAGCA-GGGCGGGATACACAA-C
* *
4858994 CAGGGATCAACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCACAACCCTCGGTCTGGTGT
1 CAGGGATC-ACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCGCAACCCTTGGTCTGGTGT
*
4859059 GATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGCGGGCG
65 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGCGGGCG
* * * * *
4859124 ATCACTATGTCGACCAGAGAGATGGGATGCGAAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTT
130 AGCACTACGCCG-CCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* **
4859189 AGACACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
194 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * *
4859254 CCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGAATCGTTTTCAATTTTTCACGATTCTTGAA
259 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT-TTGAA
* * * * * * *
4859319 ACTTTTTACGGTTCAGGACTTTTTAAAATTTTTTCAGAAGGTGTTTTCGCCCCAAACTTTGTAGA
323 ACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAGA
4859384 CGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGCGTACAAGA
388 CGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAGA
* * * *
4859448 TTTTGTGACCATTTGAAAAAAGTGTCCGCATTTTATACACTTTAATGCCTACTGGCAGCAAACCT
453 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
4859513 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CA
518 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
4859577 ACATAAGGGCCAAGTACCAGCACCCATCGCATATGATGTGCGCACACCCCCCGG-CCCCCCGATC
583 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATC
*
4859641 GCCAGAACCCCAATCCTACC
648 GCGA-AACCCCAATCCTACC
4859661 TGTAGACACC
Statistics
Matches: 1398, Mismatches: 147, Indels: 47
0.88 0.09 0.03
Matches are distributed among these distances:
894 3 0.00
895 22 0.02
896 461 0.33
897 275 0.20
898 165 0.12
899 266 0.19
900 193 0.14
901 6 0.00
902 7 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.27
Consensus pattern (893 bp):
CAGGGATCACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCGCAACCCTTGGTCTGGTGTG
ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGCGGGCGA
GCACTACGCCGCCAGAGAGACGGGATGCGAAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGAAACT
TTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAGACGT
GATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAGATTT
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCG
AAACCCCAATCCTACCAATCAGGTTCTCCAGCGATGCTCCAGCGATGGTGCCTCGACAAAGAAAA
ATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGATCCGATCTT
AGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACG
AAACGAACGTGCGGGCGCTCAGCCGGCCAGCAGGGCGGGATACACAAC
Found at i:4859816 original size:21 final size:20
Alignment explanation
Indices: 4859792--4859924 Score: 75
Period size: 21 Copynumber: 6.5 Consensus size: 20
4859782 TGTATTTTAT
4859792 TATTTATTATTATTATATGTA
1 TATTTATTATTATTATAT-TA
*
4859813 TATTT-TTACTTATT-TATTT
1 TATTTATTA-TTATTATATTA
* *
4859832 TTTTCTATTAATATTTATATGTA
1 TATT-TATTATTA-TTATAT-TA
4859855 T-TTTA-T-TTA-TATAGTTCTA
1 TATTTATTATTATTATA--T-TA
4859874 TATTTATTATATATTATAATT-
1 TATTTATTAT-TATTAT-ATTA
*
4859895 TATTTATTATTATTAT-TAA
1 TATTTATTATTATTATATTA
*
4859914 TTTTTATTATT
1 TATTTATTATT
4859925 TTTCTTGTAA
Statistics
Matches: 89, Mismatches: 8, Indels: 32
0.69 0.06 0.25
Matches are distributed among these distances:
17 4 0.04
18 1 0.01
19 20 0.22
20 20 0.22
21 28 0.31
22 7 0.08
23 5 0.06
24 3 0.03
25 1 0.01
ACGTcount: A:0.30, C:0.02, G:0.02, T:0.65
Consensus pattern (20 bp):
TATTTATTATTATTATATTA
Found at i:4859829 original size:38 final size:37
Alignment explanation
Indices: 4859777--4859924 Score: 99
Period size: 42 Copynumber: 3.7 Consensus size: 37
4859767 TTCTTTTGTA
4859777 TTTTATGTATTTTATTATTTATTATTATTATATGTATAT
1 TTTTAT-TA-TTTATTATTTATTATTATTATATGTATAT
* * *
4859816 TTTTACTTATTTATTTTTTTCTATTAATATTTATATGTATTT
1 TTTTA-TTATTTA--TTATT-TATTATTA-TTATATGTATAT
4859858 TATTTATATAGTTCTA-TATTTATTATATATTATAAT-T-TAT
1 T-TTTAT-TA-TT-TATTATTTATTAT-TATTAT-ATGTATAT
4859898 TTATTATTA-TTATTAATTT-TTATTATT
1 TT-TTATTATTTATT-ATTTATTATTATT
4859925 TTTCTTGTAA
Statistics
Matches: 89, Mismatches: 6, Indels: 31
0.71 0.05 0.25
Matches are distributed among these distances:
36 6 0.07
37 6 0.07
38 8 0.09
39 10 0.11
40 12 0.13
41 17 0.19
42 20 0.22
43 6 0.07
44 2 0.02
45 2 0.02
ACGTcount: A:0.29, C:0.02, G:0.03, T:0.66
Consensus pattern (37 bp):
TTTTATTATTTATTATTTATTATTATTATATGTATAT
Found at i:4859895 original size:17 final size:18
Alignment explanation
Indices: 4859788--4859911 Score: 58
Period size: 17 Copynumber: 7.5 Consensus size: 18
4859778 TTTATGTATT
4859788 TTAT-TATTTATTAT-TA
1 TTATATATTTATTATATA
* * *
4859804 TTATATGTATATT-TTTA
1 TTATATATTTATTATATA
* * *
4859821 CTTATTTATTT-TTTTCTA
1 -TTATATATTTATTATATA
*
4859839 TTA-ATATTTA-TATGTA
1 TTATATATTTATTATATA
*
4859855 TT-T-TATTTA-TATA-G
1 TTATATATTTATTATATA
*
4859869 TTCTATATTTATTATATA
1 TTATATATTTATTATATA
4859887 TTATA-ATTTATT-TATTA
1 TTATATATTTATTATA-TA
4859904 TTAT-TATT
1 TTATATATT
4859912 AATTTTTATT
Statistics
Matches: 83, Mismatches: 13, Indels: 23
0.70 0.11 0.19
Matches are distributed among these distances:
14 2 0.02
15 10 0.12
16 24 0.29
17 33 0.40
18 14 0.17
ACGTcount: A:0.30, C:0.02, G:0.02, T:0.65
Consensus pattern (18 bp):
TTATATATTTATTATATA
Found at i:4860543 original size:20 final size:20
Alignment explanation
Indices: 4860518--4860567 Score: 73
Period size: 20 Copynumber: 2.5 Consensus size: 20
4860508 TCCGACGAAC
*
4860518 TTCCGATGAAAAAACCCAGA
1 TTCCGATGAAAAAACCCAAA
*
4860538 TTCCGATGACAAAACCCAAA
1 TTCCGATGAAAAAACCCAAA
*
4860558 ATCCGATGAA
1 TTCCGATGAA
4860568 TCTCCAACCG
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
20 26 1.00
ACGTcount: A:0.44, C:0.26, G:0.14, T:0.16
Consensus pattern (20 bp):
TTCCGATGAAAAAACCCAAA
Found at i:4860997 original size:17 final size:16
Alignment explanation
Indices: 4860963--4861002 Score: 53
Period size: 17 Copynumber: 2.4 Consensus size: 16
4860953 TTAGATTAGG
*
4860963 TTTATTTAATATTCTT
1 TTTATTTAATATTATT
*
4860979 TTTATCTTAATTTTATT
1 TTTAT-TTAATATTATT
4860996 TTTATTT
1 TTTATTT
4861003 TTGTTTTACT
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
16 7 0.33
17 14 0.67
ACGTcount: A:0.23, C:0.05, G:0.00, T:0.72
Consensus pattern (16 bp):
TTTATTTAATATTATT
Found at i:4861038 original size:17 final size:18
Alignment explanation
Indices: 4860989--4861039 Score: 63
Period size: 17 Copynumber: 2.9 Consensus size: 18
4860979 TTTATCTTAA
4860989 TTTTATTTTTATT-TTTG
1 TTTTATTTTTATTATTTG
4861006 TTTTACTTTTCT-TTATTT-
1 TTTTA-TTTT-TATTATTTG
4861024 TTTTATTTTTATTATT
1 TTTTATTTTTATTATT
4861040 CTATTTTCTT
Statistics
Matches: 30, Mismatches: 0, Indels: 8
0.79 0.00 0.21
Matches are distributed among these distances:
16 1 0.03
17 14 0.47
18 11 0.37
19 4 0.13
ACGTcount: A:0.14, C:0.04, G:0.02, T:0.80
Consensus pattern (18 bp):
TTTTATTTTTATTATTTG
Found at i:4861134 original size:60 final size:57
Alignment explanation
Indices: 4861054--4861290 Score: 357
Period size: 58 Copynumber: 4.0 Consensus size: 57
4861044 TTTCTTTAAA
4861054 TAAAAATCAAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT--AAATTT-CAAAAAAAATATTTTT-GGGAAAAGTTGAAAGTATCAATTTTCCT
**
4861115 TGGAAATCAAAGTTTCAAAAAAAATATTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAAT-AAA-TTTCAAAAAAAATATTTTTG-GGAAAAGTTGAAAGTATCAATTTTCCT
*
4861175 TAAAAATAAATTTCCAAAAAAATATTTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATAAATTTCAAAAAAAATA-TTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
4861233 TAAAAATAAATTTTCAAAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCC
1 TAAAAATAAA-TTTCAAAAAAAATATTTTT-GGGAAAAGTTGAAAGTATCAATTTTCC
4861291 CTACACAAGA
Statistics
Matches: 164, Mismatches: 7, Indels: 12
0.90 0.04 0.07
Matches are distributed among these distances:
58 55 0.34
59 50 0.30
60 51 0.31
61 8 0.05
ACGTcount: A:0.46, C:0.08, G:0.12, T:0.34
Consensus pattern (57 bp):
TAAAAATAAATTTCAAAAAAAATATTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:4861253 original size:59 final size:60
Alignment explanation
Indices: 4861054--4861290 Score: 365
Period size: 59 Copynumber: 4.0 Consensus size: 60
4861044 TTTCTTTAAA
* *
4861054 TAAAAATCAAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATC-AAATTTTCAAAAAAAATATTTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
** *
4861115 TGGAAATCAAAGTTTCAAAAAAAATA-TTTTTGAGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATCAAATTTTCAAAAAAAATATTTTTTG-GGAAAAGTTGAAAGTATCAATTTTCCT
*
4861175 TAAAAAT-AAA-TTTCCAAAAAAATATTTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
1 TAAAAATCAAATTTTCAAAAAAAATATTTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
*
4861233 TAAAAAT-AAATTTTCAAAAAAAATATTTTTGGGGAAAAGTTGAAAGTATCAATTTTCC
1 TAAAAATCAAATTTTCAAAAAAAATATTTTTTGGGAAAAGTTGAAAGTATCAATTTTCC
4861291 CTACACAAGA
Statistics
Matches: 163, Mismatches: 10, Indels: 8
0.90 0.06 0.04
Matches are distributed among these distances:
58 50 0.31
59 59 0.36
60 48 0.29
61 6 0.04
ACGTcount: A:0.46, C:0.08, G:0.12, T:0.34
Consensus pattern (60 bp):
TAAAAATCAAATTTTCAAAAAAAATATTTTTTGGGAAAAGTTGAAAGTATCAATTTTCCT
Found at i:4865186 original size:11 final size:11
Alignment explanation
Indices: 4865157--4865213 Score: 53
Period size: 11 Copynumber: 5.1 Consensus size: 11
4865147 ATGAGAAAAG
4865157 AGAAAAAAGATGA
1 AGAAAAAAGA--A
* *
4865170 TGAAAAAAGGA
1 AGAAAAAAGAA
*
4865181 ATAAAAAAGAA
1 AGAAAAAAGAA
4865192 AGAAAAAAGAA
1 AGAAAAAAGAA
*
4865203 A-AAGAAAGAA
1 AGAAAAAAGAA
4865213 A
1 A
4865214 TGAGAAAATG
Statistics
Matches: 37, Mismatches: 7, Indels: 3
0.79 0.15 0.06
Matches are distributed among these distances:
10 9 0.24
11 20 0.54
13 8 0.22
ACGTcount: A:0.75, C:0.00, G:0.19, T:0.05
Consensus pattern (11 bp):
AGAAAAAAGAA
Found at i:4865196 original size:22 final size:21
Alignment explanation
Indices: 4865145--4865230 Score: 84
Period size: 22 Copynumber: 3.9 Consensus size: 21
4865135 AATGGATGAA
* *
4865145 AAATGAGAAAAGAGAAAAAAG
1 AAATGAAAAAAGAAAAAAAAG
*
4865166 ATGATGAAAAAAGGAATAAAAAAG
1 A-AATGAAAAAA-GAA-AAAAAAG
4865190 AAA-GAAAAAAGAAAAAGAAAG
1 AAATGAAAAAAGAAAAA-AAAG
*
4865211 AAATGAGAAAATGAAAAAAA
1 AAATGA-AAAAAGAAAAAAA
4865231 GGAGATTCAA
Statistics
Matches: 54, Mismatches: 5, Indels: 11
0.77 0.07 0.16
Matches are distributed among these distances:
20 3 0.06
21 11 0.20
22 19 0.35
23 13 0.24
24 8 0.15
ACGTcount: A:0.73, C:0.00, G:0.20, T:0.07
Consensus pattern (21 bp):
AAATGAAAAAAGAAAAAAAAG
Found at i:4865235 original size:17 final size:17
Alignment explanation
Indices: 4865184--4865235 Score: 52
Period size: 17 Copynumber: 3.1 Consensus size: 17
4865174 AAAAGGAATA
*
4865184 AAAAAGAAAGAAAA-AAG
1 AAAAAGAAA-AAAAGGAG
* *
4865201 AAAAAGAAAGAAATGAG
1 AAAAAGAAAAAAAGGAG
*
4865218 AAAATGAAAAAAAGGAG
1 AAAAAGAAAAAAAGGAG
4865235 A
1 A
4865236 TTCAAATTAA
Statistics
Matches: 29, Mismatches: 5, Indels: 2
0.81 0.14 0.06
Matches are distributed among these distances:
16 3 0.10
17 26 0.90
ACGTcount: A:0.75, C:0.00, G:0.21, T:0.04
Consensus pattern (17 bp):
AAAAAGAAAAAAAGGAG
Found at i:4866554 original size:41 final size:41
Alignment explanation
Indices: 4866478--4866899 Score: 673
Period size: 41 Copynumber: 10.1 Consensus size: 41
4866468 ATGATTGTCA
*
4866478 AGGAGCAATTTACTTTCCAAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCC-AAAGTCGTGGTGCCTCTGTTTAG
*
4866520 AGGAGTAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
* *
4866561 AGGAGCAATTTACTTTCTCAAAGTTGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTC-CAAAGTCGTGGTGCCTCTGTTTAG
*
4866603 AGGAGCAATTTATTTTTCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
*
4866644 AGGAGCAATTTACTTTCCAAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCC-AAAGTCGTGGTGCCTCTGTTTAG
*
4866686 AGGAGCAATTTATTTTTCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
*
4866727 AGGAGCAATTTACTTTCTCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTC-CAAAGTCGTGGTGCCTCTGTTTAG
* *
4866769 AAGAGCAATTTATTTTTCAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
*
4866810 AGGAGCAATTTATTTTCAAAAGTCGTGGTGCCTCTGTTTAG
1 AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
* *
4866851 AGGAGCAATTTATGTTTCTCAAAGTCGTTGAGCCTCTGTTTAG
1 AGGAGCAATTTAT-TTTC-CAAAGTCGTGGTGCCTCTGTTTAG
4866894 AGGAGC
1 AGGAGC
4866900 TTTGGTAAAA
Statistics
Matches: 352, Mismatches: 23, Indels: 9
0.92 0.06 0.02
Matches are distributed among these distances:
41 190 0.54
42 135 0.38
43 27 0.08
ACGTcount: A:0.23, C:0.16, G:0.24, T:0.36
Consensus pattern (41 bp):
AGGAGCAATTTATTTTCCAAAGTCGTGGTGCCTCTGTTTAG
Found at i:4866617 original size:83 final size:84
Alignment explanation
Indices: 4866478--4866899 Score: 730
Period size: 83 Copynumber: 5.1 Consensus size: 84
4866468 ATGATTGTCA
* *
4866478 AGGAGCAATTTACTTTC-CAAAAGTCGTGGTGCCTCTGTTTAGAGGAGTAATTTATTTTCCAAAG
1 AGGAGCAATTTACTTTCTCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
4866542 TCGTGGTGCCTCTGTTTAG
66 TCGTGGTGCCTCTGTTTAG
*
4866561 AGGAGCAATTTACTTTCTC-AAAGTTGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
1 AGGAGCAATTTACTTTCTCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
4866625 TCGTGGTGCCTCTGTTTAG
66 TCGTGGTGCCTCTGTTTAG
4866644 AGGAGCAATTTACTTTC-CAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
1 AGGAGCAATTTACTTTCTCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
4866708 TCGTGGTGCCTCTGTTTAG
66 TCGTGGTGCCTCTGTTTAG
*
4866727 AGGAGCAATTTACTTTCTC-AAAGTCGTGGTGCCTCTGTTTAGAAGAGCAATTTATTTTTCAAAG
1 AGGAGCAATTTACTTTCTCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
4866791 TCGTGGTGCCTCTGTTTAG
66 TCGTGGTGCCTCTGTTTAG
4866810 AGGAGCAATTTA-TTT-TCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATGTTTCTCAA
1 AGGAGCAATTTACTTTCTCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTAT-TTT-TCAA
* *
4866873 AGTCGTTGAGCCTCTGTTTAG
64 AGTCGTGGTGCCTCTGTTTAG
4866894 AGGAGC
1 AGGAGC
4866900 TTTGGTAAAA
Statistics
Matches: 325, Mismatches: 8, Indels: 11
0.94 0.02 0.03
Matches are distributed among these distances:
81 2 0.01
82 39 0.12
83 253 0.78
84 31 0.10
ACGTcount: A:0.23, C:0.16, G:0.24, T:0.36
Consensus pattern (84 bp):
AGGAGCAATTTACTTTCTCAAAAGTCGTGGTGCCTCTGTTTAGAGGAGCAATTTATTTTTCAAAG
TCGTGGTGCCTCTGTTTAG
Found at i:4866912 original size:1 final size:1
Alignment explanation
Indices: 4866906--4866954 Score: 53
Period size: 1 Copynumber: 49.0 Consensus size: 1
4866896 GAGCTTTGGT
* * * * *
4866906 AAAAAAAAAACAAAAAACAAAAAACAAAAAACAAAAAAAAAACAAAAAA
1 AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
4866955 TGACAATGTT
Statistics
Matches: 38, Mismatches: 10, Indels: 0
0.79 0.21 0.00
Matches are distributed among these distances:
1 38 1.00
ACGTcount: A:0.90, C:0.10, G:0.00, T:0.00
Consensus pattern (1 bp):
A
Done.