Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 19268551
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 68000 characters in sequence are not A, C, G, or T
File 43 of 120
Found at i:4866954 original size:7 final size:7
Alignment explanation
Indices: 4866906--4866947 Score: 70
Period size: 7 Copynumber: 6.3 Consensus size: 7
4866896 GAGCTTTGGT
4866906 AAAA-AA
1 AAAACAA
4866912 AAAACAA
1 AAAACAA
4866919 AAAACAA
1 AAAACAA
4866926 AAAACAA
1 AAAACAA
4866933 AAAACAA
1 AAAACAA
4866940 AAAA-AA
1 AAAACAA
4866946 AA
1 AA
4866948 CAAAAAATGA
Statistics
Matches: 35, Mismatches: 0, Indels: 2
0.95 0.00 0.05
Matches are distributed among these distances:
6 8 0.23
7 27 0.77
ACGTcount: A:0.90, C:0.10, G:0.00, T:0.00
Consensus pattern (7 bp):
AAAACAA
Found at i:4867193 original size:21 final size:19
Alignment explanation
Indices: 4867167--4867306 Score: 66
Period size: 18 Copynumber: 7.5 Consensus size: 19
4867157 TTTTATGTAT
4867167 TTTATTATTTATTATTATA
1 TTTATTATTTATTATTATA
* *
4867186 TGTA-TATTT-TTACT-TA
1 TTTATTATTTATTATTATA
*
4867202 TTTATTTATTT-TT-TT-TC
1 TTTA-TTATTTATTATTATA
*
4867219 TGTTAATATTTA-TATGTAT-
1 T-TTATTATTTATTAT-TATA
* *
4867238 TTTATTTATATAGTT-CTATA
1 TTTA-TTATTTA-TTATTATA
* *
4867258 TTTATTATATATTATAATTTA
1 TTTATTATTTATTAT--TATA
*
4867279 TTTATTA-TTATTATTATT
1 TTTATTATTTATTATTATA
4867297 TTTATTATTT
1 TTTATTATTT
4867307 TTCTTGTAAT
Statistics
Matches: 92, Mismatches: 14, Indels: 30
0.68 0.10 0.22
Matches are distributed among these distances:
16 5 0.05
17 13 0.14
18 30 0.33
19 22 0.24
20 11 0.12
21 11 0.12
ACGTcount: A:0.28, C:0.02, G:0.03, T:0.67
Consensus pattern (19 bp):
TTTATTATTTATTATTATA
Found at i:4867215 original size:20 final size:20
Alignment explanation
Indices: 4867169--4867305 Score: 54
Period size: 21 Copynumber: 6.7 Consensus size: 20
4867159 TTATGTATTT
4867169 TATTATTTATTATTATATGTA
1 TATT-TTTATTATTATATGTA
*
4867190 TATTTTTACTTATT-TATTTA
1 TATTTTTA-TTATTATATGTA
* * *
4867210 T-TTTTTTTCTGTTAATATTTA
1 TATTTTTAT-TATT-ATATGTA
* *
4867231 TATGTATT-TTATTTATATAGTTC
1 TAT-TTTTATTA-TTATAT-G-TA
*
4867254 TATATTTATTA-TATAT-TA
1 TATTTTTATTATTATATGTA
*
4867272 TA-ATTTATTTATTATTAT-TA
1 TATTTTTA-TTATTA-TATGTA
4867292 TTATTTTTATTATT
1 -TATTTTTATTATT
4867306 TTTCTTGTAA
Statistics
Matches: 90, Mismatches: 11, Indels: 30
0.69 0.08 0.23
Matches are distributed among these distances:
17 5 0.06
18 7 0.08
19 10 0.11
20 15 0.17
21 33 0.37
22 10 0.11
23 10 0.11
ACGTcount: A:0.28, C:0.02, G:0.03, T:0.66
Consensus pattern (20 bp):
TATTTTTATTATTATATGTA
Found at i:4867277 original size:17 final size:18
Alignment explanation
Indices: 4867238--4867293 Score: 55
Period size: 17 Copynumber: 3.1 Consensus size: 18
4867228 TTATATGTAT
*
4867238 TTTATTTATATAGTTCTATA
1 TTTA-TTATATA-TTATATA
4867258 TTTATTATATATTATA-A
1 TTTATTATATATTATATA
4867275 TTTATT-TATTATTAT-TA
1 TTTATTATA-TATTATATA
4867292 TT
1 TT
4867294 ATTTTTATTA
Statistics
Matches: 33, Mismatches: 1, Indels: 7
0.80 0.02 0.17
Matches are distributed among these distances:
16 2 0.06
17 16 0.48
18 4 0.12
19 7 0.21
20 4 0.12
ACGTcount: A:0.32, C:0.02, G:0.02, T:0.64
Consensus pattern (18 bp):
TTTATTATATATTATATA
Found at i:4867306 original size:9 final size:9
Alignment explanation
Indices: 4867279--4867308 Score: 51
Period size: 9 Copynumber: 3.3 Consensus size: 9
4867269 TTATAATTTA
4867279 TTTATTATT
1 TTTATTATT
*
4867288 ATTATTATT
1 TTTATTATT
4867297 TTTATTATT
1 TTTATTATT
4867306 TTT
1 TTT
4867309 CTTGTAATAT
Statistics
Matches: 19, Mismatches: 2, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
9 19 1.00
ACGTcount: A:0.23, C:0.00, G:0.00, T:0.77
Consensus pattern (9 bp):
TTTATTATT
Found at i:4867915 original size:11 final size:11
Alignment explanation
Indices: 4867878--4867918 Score: 64
Period size: 11 Copynumber: 3.7 Consensus size: 11
4867868 ATCCCAGAAA
*
4867878 CCGGTGACCTT
1 CCGGTGAACTT
*
4867889 CCGGCGAACTT
1 CCGGTGAACTT
4867900 CCGGTGAACTT
1 CCGGTGAACTT
4867911 CCGGTGAA
1 CCGGTGAA
4867919 AAAACCCAGA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
11 27 1.00
ACGTcount: A:0.17, C:0.32, G:0.29, T:0.22
Consensus pattern (11 bp):
CCGGTGAACTT
Found at i:4868318 original size:15 final size:16
Alignment explanation
Indices: 4868285--4868343 Score: 52
Period size: 16 Copynumber: 3.8 Consensus size: 16
4868275 GCTCCAGGTT
*
4868285 TTTTTTTTTTTTTGAA
1 TTTTTTTTATTTTGAA
* *
4868301 TTTTTTTTATTTTCAT
1 TTTTTTTTATTTTGAA
4868317 TTATTTATTTA-TTTG--
1 TT-TTT-TTTATTTTGAA
4868332 TTTTTTTTATTT
1 TTTTTTTTATTT
4868344 ATTAGATTAG
Statistics
Matches: 36, Mismatches: 4, Indels: 8
0.75 0.08 0.17
Matches are distributed among these distances:
13 4 0.11
14 5 0.14
15 2 0.06
16 15 0.42
17 6 0.17
18 4 0.11
ACGTcount: A:0.14, C:0.02, G:0.03, T:0.81
Consensus pattern (16 bp):
TTTTTTTTATTTTGAA
Found at i:4868424 original size:17 final size:17
Alignment explanation
Indices: 4868404--4868443 Score: 50
Period size: 14 Copynumber: 2.5 Consensus size: 17
4868394 TTTGTTTTAC
*
4868404 TTTTCTTTATTTTTCTA
1 TTTTCTTTATTATTCTA
4868421 --TT-TTTATTATTCTA
1 TTTTCTTTATTATTCTA
4868435 TTTTCTTTA
1 TTTTCTTTA
4868444 AATAAAAATC
Statistics
Matches: 19, Mismatches: 1, Indels: 6
0.73 0.04 0.23
Matches are distributed among these distances:
14 11 0.58
15 2 0.11
16 2 0.11
17 4 0.21
ACGTcount: A:0.15, C:0.10, G:0.00, T:0.75
Consensus pattern (17 bp):
TTTTCTTTATTATTCTA
Found at i:4868428 original size:14 final size:14
Alignment explanation
Indices: 4868409--4868438 Score: 51
Period size: 14 Copynumber: 2.1 Consensus size: 14
4868399 TTTACTTTTC
*
4868409 TTTATTTTTCTATT
1 TTTATTATTCTATT
4868423 TTTATTATTCTATT
1 TTTATTATTCTATT
4868437 TT
1 TT
4868439 CTTTAAATAA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
14 15 1.00
ACGTcount: A:0.17, C:0.07, G:0.00, T:0.77
Consensus pattern (14 bp):
TTTATTATTCTATT
Found at i:4868526 original size:59 final size:59
Alignment explanation
Indices: 4868446--4868621 Score: 241
Period size: 58 Copynumber: 2.9 Consensus size: 59
4868436 TTTCTTTAAA
*
4868446 TAAAAATCAAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCT-T
1 TAAAAAT--AAATTTCCAAAAAAAGTATTTTT-GGGAAAAGTTGAAAGTATCAATTTTCTCT
** **
4868507 TAAAAATAAATTT-TGAAAAAAGGGTTTTTGAGGAAAAGTTGAAAGTATCAATTTT-TCT
1 TAAAAATAAATTTCCAAAAAAAGTATTTTTG-GGAAAAGTTGAAAGTATCAATTTTCTCT
4868565 TAAAAATAAATTTCCAAAAAAAGTATTTTTGGGGAAAAGTTGAAAGTATCAATTTTC
1 TAAAAATAAATTTCCAAAAAAAGTATTTTT-GGGAAAAGTTGAAAGTATCAATTTTC
4868622 CCTACACAAG
Statistics
Matches: 101, Mismatches: 9, Indels: 11
0.83 0.07 0.09
Matches are distributed among these distances:
57 2 0.02
58 49 0.49
59 42 0.42
60 1 0.01
61 7 0.07
ACGTcount: A:0.45, C:0.06, G:0.14, T:0.35
Consensus pattern (59 bp):
TAAAAATAAATTTCCAAAAAAAGTATTTTTGGGAAAAGTTGAAAGTATCAATTTTCTCT
Found at i:4869244 original size:26 final size:26
Alignment explanation
Indices: 4869215--4869267 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4869205 CCAATCCGAT
*
4869215 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4869241 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4869267 C
1 C
4869268 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4872793 original size:26 final size:26
Alignment explanation
Indices: 4872756--4872807 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
4872746 TGGTCCGATT
*
4872756 TTAGACTAGGAATGAACTCCTTATGC
1 TTAGACTAGGAATGAACTCCATATGC
*
4872782 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTAGGAATGAACTCCATATGC
4872808 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.19, G:0.21, T:0.29
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCATATGC
Found at i:4873787 original size:14 final size:16
Alignment explanation
Indices: 4873757--4873788 Score: 50
Period size: 14 Copynumber: 2.1 Consensus size: 16
4873747 AGGTCCCACT
4873757 CTGCATGCTGTCAATC
1 CTGCATGCTGTCAATC
4873773 CTGC-TGCTG-CAATC
1 CTGCATGCTGTCAATC
4873787 CT
1 CT
4873789 CGATCTGGTT
Statistics
Matches: 16, Mismatches: 0, Indels: 2
0.89 0.00 0.11
Matches are distributed among these distances:
14 7 0.44
15 5 0.31
16 4 0.25
ACGTcount: A:0.16, C:0.34, G:0.19, T:0.31
Consensus pattern (16 bp):
CTGCATGCTGTCAATC
Found at i:4874538 original size:26 final size:26
Alignment explanation
Indices: 4874509--4874561 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4874499 TCGGTCCGAT
4874509 CTTAAACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
*
4874535 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCGTATG
4874561 C
1 C
4874562 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCGTATG
Found at i:4874890 original size:888 final size:884
Alignment explanation
Indices: 4869135--4877569 Score: 10550
Period size: 888 Copynumber: 9.5 Consensus size: 884
4869125 CTCGATGATG
* * * * *
4869135 GTGCCCCGACGAAGAAAAATACGGCACCAGGACATGCCCGATCCCAGCATGTGCTACCGTAACCC
1 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* ** *
4869200 TCGGTCCAATCCGATCTTAGACTGGGAATTAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
66 TCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * ** * * **
4869265 TGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCACTCAATCGACCAGAGGGGCAGGATGCATAA
131 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * *
4869330 GCTGGGGATCAGCCGAGTCCCCCACTGCGTGCTGCCGATCATGCTGCCGCAACCCTCGGTCTGGT
196 GCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCTGGT
* * * * * * ** * *
4869395 CTGATTTTAGACTAGGAATGAACTCTGTATGTCGAAGCCAATCGATAAAATGAGCGGGCGGGTGG
261 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGAC----GG
* * * * *
4869460 GCGGGCAGGCACTATGTCGACCAGAGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGG
321 GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
4869525 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATTGCTTGTAAATTCATAT
386 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
*
4869590 AATGGTCCCTTAAGCCTTCACGTG-AGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAAT
451 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
** *** * *
4869654 TTTCAAAACTTTTTACGGTTCAAGATTTTTTAGAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
516 TTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACT
* * *
4869719 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCAAAGTG
581 TGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG
*
4869784 TACGAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
646 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
4869849 CAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAA
711 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* *
4869914 GGGGCCAATATAAGGGCCAAATACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGGCCC
776 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CC
* * * * * *
4869979 CCCCAATCGTCGAAACCCCAATGTCGTCGGTCAGGTTCTCCGACGA
839 CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGA
** * * * ** *
4870025 TGGTGCCCCGGTGAAGAAAAATGCAGCACCAGTACATGCCCGGGCATAGCATGTGCTGCCGTAAC
1 --GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * * * *
4870090 CCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCATACGCTTAGACTGGGAAAGAACTCCG
64 CCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
4870155 TATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGGGATGCGC
129 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * * ** * * *
4870220 AAGCTGAGGATCGGCCGAGTCCCCCTCTATGTGTTGCCGATCCTGCTACCGTAACCCTCAATCTG
194 AAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCTG
* ** * * * * *
4870285 ATCAAATCTTAGACTGGAAATGAAATCCGTATGCCTAAGCCAACCAATGAAACGAGCGGGCGGGC
259 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGACGGGC
* * * *
4870350 GGGCGGGCACTACGTCGGCCTGGGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTG
323 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
4870415 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAA
388 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
*
4870480 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTT
453 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
*
4870545 TTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
518 TTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
* * * *
4870610 GTAGATGTGATCCTCGTATTTTTTTTGGTATGTACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
583 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
4870675 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCTACTGGTAGCA
648 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * * *
4870740 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTTAGTGCTTGAGGTTTGATGAGGGATAAGG
713 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
4870805 GGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACGCAGCCCCTCGGCCC
778 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA--CA-CCCCCCGGCCC
4870870 CCTCGATC-CCTGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGTGAAGCTCCGATGA
840 CC-CGATCGCC-GGAACCCCAATGCCGCCGGTCAGGTTCT-C--TG-A----C---GA
** * * * *
4870927 TGGTGCCCCGGTGAAGAAAAATACGGCACCAGCACATGCACGAGCCCAGCATGTGCTGTCACAA-
1 --GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* *
4870991 CC-C--TT--G---G-TC-----C---G---G---TCAG-AT-CTTAGACTGGTAATGAACTCCG
64 CCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * **
4871031 TATGCCTAAGTCAACCCATGAAACGAGCATGCGGGCGCTCTGCCAACCAGAGGGGCGGGATGCGC
129 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * * * * **
4871096 AAGCCGGGGATCGGTCGGTTCCCCTTTTGCGTGCTGCCGATCCTGCTGCTGTAACCCTCAGTCCC
194 AAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCTG
* * * *
4871161 GTCTGATCTCAGACTGGGAATGAACTCCGTATGCCTCAGCCAACCGACGAAATGA---AGGGGCG
259 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGGCG
*
4871223 GACGGGCACTACG-CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA-GGTGGTAGGTGG
324 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
4871286 GTTTAGGCACATCTTTATATTTTTGCATGCCAATGGCATTTTTATGGCTTGTAAATTCATACAAT
389 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
4871351 GGTCCCTTAAGCCTTCACATGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
454 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * * *
4871416 GGAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTTGGAAGGATTTTTAGCCCCAAACTTAG
519 TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGG
* * * *
4871481 TAGACATGATCCTTATATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAACTCAAAGTGTAC
584 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
4871546 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
649 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
4871611 ACCTATAAAATCTCAAATGCTCTTTAA-GGGGTTTGAGTTCTGGAGGTTTGATGAGGGATACGGG
714 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
4871675 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCG
779 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCG
* * * *
4871740 ATCGCCGGAACCCCAACGCCGCTGGTCAGGTTCTCCGGCGA
844 ATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGA
* * * * * * *
4871781 TGGTGCCCCGATGAAAGGAAAAGGCGGCACCAGCACATACCAGAGCCCAGCATGTGCTGTCACAA
1 --GTGCCCCGACG-AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * ** * *
4871846 CCCTCAGTCCAATCCAATCTTAGACTGGGAATGAACT-CGTTACGCTTAGACTGGGAATGAACTC
63 CCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCG-TATGCTTAGACTGGGAATGAACTC
* * * * * * *
4871910 CGTATGCCTAAGTCGACGCACGAAATGAACGTTCGGGTGCTCAGCCGGCCAGAAGGGCGGGATGC
127 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
* * * * * * * * * ** ** *
4871975 GCAAGCCAGGCATCGACTGGGTCCCCCTCTGCATGCTGTCAATCCTACTACTATAATGCTCAATC
192 GCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTC
* *
4872040 TGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTTAGCCAACCGACG--A--A---ACGGG
257 TGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGG
* * *
4872098 CGGGCGGGCACTACCCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGC
322 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
*
4872163 GGGTTTAGGCACATCTTCATATTTCTGCATGCAAATGCCATTTTTATGGCTTGTAAATTCATACA
387 GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* *
4872228 ATGGTCCCTTAAGCCTCCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATT
452 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* *
4872293 TTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTCTTTTGGAAGGATTTTTGGCCCCAAACTT
517 TTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* *
4872358 GGTAGACATGATACTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
582 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
*
4872423 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGC
647 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
4872488 AAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGG
712 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * * *
4872553 GGGCCAATATAAGGGCCATGTACCAACTCCCATCGCACATCATGTGCGCACACCCCCCGACCCCC
777 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCC
* *
4872618 CCGATCGCCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGCTCTGGCGA
841 CCGATCGCCGGAACCCCAATGCCGCCGGTCAGG---T-------T-CTCTGACGA
* * * * * * * * * *
4872673 TGGTGCCCTGGCAAAGAAAAATACGACACCAGAACATGCTCGAGCCGAGCATGTGCTGCTGTAAC
1 --GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * *
4872738 CCTCGG-TCTGGTCCGATTTTAGACTAGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTCC
64 CCTCGGTTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * * *
4872802 ATATGCCTAAGTCAACCCACGAAACGAGCATGCAGGCGTTCAGCCAGCCAGAGGGGCGGGATGCG
128 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG
* * * * ** * *
4872867 TAAGTCGGGGATCGACCGGTTCCCCCTCTGCGTGCTATCGATCCTGCTGCCATAACCCTAAGTCT
193 CAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCT
* * * * *
4872932 GGTCCGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCAACGAAAC-A--AATGGAC
258 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGGC
* ** *
4872993 GGTCGGGCACTACGTTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGATG
323 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* ** * *
4873058 GGTTAAGGCATTTCTTCATATTTTTGCCTGCCAATGCC-TTTCTTATGGCTTGTAAATTCATACA
388 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT-TTATGGCTTGTAAATTCATACA
* *
4873122 ATGGT-CCTT-AGCCTTCACGTGAAGTTTCATTGCAAGACGACCCGTTTTCTATTTTTCACGATT
452 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * * *
4873185 TTCGAAACTATTTACGGTTCGAGATTTTTTAAAA-TTTTTT-G-A--AGTTTTGGCCCCAAACTT
517 TTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* *
4873245 GGTAGACGTGATCCCTGTA-TTTTTCTGGCATGCACAAAAAAAATTCAGCT-AAAACTCGAAGTG
582 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC-AAAAAAATTCAGCTAAAAACTCGAAGTG
*
4873308 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAG
646 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
4873373 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
711 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
** * * * **
4873438 GAAGCCAACATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGCACCGCCCCCCCCG
776 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCCGGC-
* * * * * * *
4873503 CCCCCAATCGCTGGAACCACAATGCCGATCAGGTTCTCCGATGATGCTCTGGC-A
838 CCCCCGATCGCCGGAACCCCAATGCCG--CCGG---T-C-A-GGTTCTCTGACGA
* *** * * *
4873557 ATGGTTCGACGAAGAAAAATGTGGCACCAG--CATGCTCGAGCCCAGCATATGCTGCCGCAACCC
1 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
*
4873620 T---TT-GGT-C---C-----CTGGG-ATG-ACT-CGTATGCTTAGACTGGGAATGAACTTCGTA
66 TCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * *
4873669 TCCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATACG-AA
131 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * * *
4873733 GCCGGGGATCGGTCAGGTCCCACTCTGCATGCTGTCAATCCTGCTGCTGCAATCCTC-GATCTGG
196 GCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAG-TCTGG
* * * *
4873797 TTTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGCGGGCGGGCA
260 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGACGGGC-
* *
4873862 GGCGAGCGGGCACTACACCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATA-GGTGGTAG
323 -G-G-GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
** *
4873926 GTGGGTTTAGGCACATCTTTGTATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
385 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
4873991 CAATGGTCCCTTAAGCCTTCACATGAAGTTTCATTGCAAGACGACTCGTTTTCTATTTTTCACGA
450 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * *
4874056 TTTTGGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTTGGAAGGAATTTTGGCCCCAACC
515 TTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAC
* * *
4874121 TTGGTAGATGTGATCCTTTTATTTTTTTTAGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
580 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* * *
4874186 GTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAAACACTTTGATGGCTACTGGCA
645 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * *
4874251 GCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTTTGAGTTCTTGAGGTTTGATGAGGGATA
710 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
4874316 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATGATGTGCGCACACTGCCCCCCGG
775 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA---CCCCCCGG
**
4874381 CCTCCCCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCTGACGA
837 CC-CCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGA
* * *
4874430 -TGCTCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAACATGTGCTACCGCAACCC
1 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
*
4874494 TCGGTTCGGTCCGATCTTAAACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
66 TCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * *
4874559 TGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGTCGGCCAGAGGGGCGGGATGCGCAA
131 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * *
4874624 GCCGAGGATAGGCCGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCCGTAACCCTCAGTAC-GG
196 GCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGT-CTGG
4874688 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCG
260 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-GGACGGGCG
* * *
4874753 GGCGGGCACTAGGCGGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGG
324 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *
4874818 ATTTAGGCACATCTTCATATTTCTGCATGCCAATGGCATTTTTATGGCTTGTAAATTCATACAAT
389 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
4874883 AGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
454 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* *
4874948 TGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACCTG
519 TGAAACTTTTT-ACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
* * * *
4875012 ATAGACGTGATCCTTGTATTTTTGTTCGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
583 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
4875077 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGTA
648 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * * *
4875142 AACCTGTAAAATCTCAAATGCTCTTTTAGGGGGAGTGAGTTCTCGAGGTTTGATGAGTGATAGAG
713 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
*
4875207 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCC
778 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
*
4875272 GATCGCCGGAACCGCAATGCCGCCGGTCAGGTTCTCCGATGATGCTTCGGCGA
843 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--TGA--------CGA
* * *
4875325 TGGTGCCCCGACGAAGAAAAATGCGGCTCCAGCAGATGCCTGAGCCCAGCATGTGCTGCCGCAAC
1 --GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* *
4875390 CCTCGG-TCTGGTCCGATCTTAGACTGGGAATTAACTTCGTATGCTTAGACTGGGAATGAACTCC
64 CCTCGGTTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * * * * *
4875454 GTATGCGTAAGTCAACCCACGAAATGAACGTGCGGGCGCTTAGTC-ACCAAAGGGGCGGGATGCG
128 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG
** * * * *
4875518 CAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCCATCTTGCTGCCGCAACCCTCAGTCT
193 CAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCT
* * *
4875583 GGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC-AAA-AAGAG-CGGGC
258 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGGC
* * * *
4875645 GGGCGGGCACTATGCCAGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAAGTG
323 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
4875710 GGTTTAGGCACATCTTCATATTTATGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
388 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
4875775 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGCTTTCTATTTTTCATGATTT
453 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* *
4875840 TTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTG
518 TTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
* *
4875905 GTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGTA
583 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
4875970 CAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTAATGGCTATTGGCAGCA
648 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
4876035 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTAGAGGTTTGATGAGGGATAGGG
713 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * **
4876100 GGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCCTGTGCGCACA-CCCCCTACCCCCC
778 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* *
4876164 GATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGATGA
843 GATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCT---GA-----C---GA
* * * *
4876217 TGGTGCCCCGACGAAGAAAAATGTGGCACCACCACATGCCCGAGCCTAGCATGTGCTGCCACAA-
1 --GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
*
4876281 CC-C---TC-G---G-TC-----C---G---G---TCCG-AT-CTTACACTGGGAATGAACTCCG
64 CCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * *
4876321 TATGCCTAAGTCAACCCACGAAACGAGGGTGCGTGCGCTCAGCCAGCCAGAGGGGCGGGATGCGC
129 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
* * * * ** * **
4876386 AAGTCGGGGATCGACCGGGT-CCCTTCTGCGTGCTGCTGATCCTGCTGCCACAACACTCAAACTG
194 AAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCTG
* *
4876450 GTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACG-AA--A-TGA---GCG
259 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGGCG
* * *
4876508 GGCGGGCACTATGCCGGCCAGAGAAACGGGATGCGCAAGCCGTGGATCGATAGGCTGGTAGGTGG
324 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *** *
4876573 GTTTAGGCACCTCTTCATATTTTTATGTGCCAATACCATTTTTATGGCTTGTAAATTCATACAAT
389 GTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* *
4876638 GGTCCCTTAAGCCTTCATGTGAAGTTTCATGGGAAGACGACTCGTTTTCTATTTTTCACGATTTT
454 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* *
4876703 CT-AAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
519 -TGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
* * * *
4876767 GTAGATGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAAATTCAGCTAAAAACTCGATGTGT
583 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGT
*
4876832 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGC
647 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
*
4876897 AAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
712 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
*
4876962 GGGCCAATATAAGGGCCAAGTATCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
777 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
* *
4877027 CGATCGCTGGAACCCCAATGCCGTCGGTCAGGTTCCTCGGCGATGCTCCGACGA
842 CGATCGCCGGAACCCCAATGCCGCCGGTCAGG-T--T---C--T-CT--GACGA
** *
4877081 TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTATCGTAAC
1 --GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * * * * * *
4877146 CCTCCG-TCTGGTCTGATCTTAGACTTGCAATGAACTCCATATGGTT-GACTTGGAATGAACTCC
64 CCTCGGTTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
** * * *
4877209 GTATGCCTAAACCAACCCACGAAACAAGCGTGCGGGCGCTCAGCCCGCCAGAGGGGCGGGATACG
128 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCG
* * ** * *
4877274 CAAGCCGGGGATCGGCCTGGTCCCCTTCTGCGTGCTGTAGATCCTGCTGCTGTAACCCTCAGTCC
193 CAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCT
*
4877339 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACTAAACGAGCGGGCGAG
258 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---GG-GA-
* * * * *
4877404 CGGGTGGGCGGGCGGGTGGGCACTACGCCGGCTAGAGAAACGGGATGCACAAGCCATCGATCGAT
318 C----GGGCGGGC----GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGAT
* *
4877469 AGGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTG
375 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
4877534 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
440 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
4877570 TCCTTGTATT
Statistics
Matches: 6598, Mismatches: 733, Indels: 406
0.85 0.09 0.05
Matches are distributed among these distances:
854 14 0.00
855 45 0.01
856 2 0.00
857 2 0.00
859 1 0.00
862 274 0.04
863 262 0.04
864 215 0.03
865 41 0.01
866 161 0.02
867 46 0.01
868 8 0.00
869 78 0.01
870 343 0.05
871 105 0.02
872 108 0.02
873 89 0.01
874 40 0.01
875 3 0.00
876 178 0.03
877 22 0.00
878 92 0.01
879 545 0.08
880 147 0.02
881 202 0.03
882 23 0.00
883 1 0.00
884 39 0.01
885 18 0.00
886 200 0.03
887 105 0.02
888 598 0.09
889 428 0.06
890 211 0.03
891 365 0.06
892 482 0.07
893 488 0.07
894 124 0.02
895 7 0.00
896 6 0.00
897 120 0.02
898 158 0.02
899 1 0.00
900 1 0.00
901 2 0.00
902 56 0.01
906 6 0.00
910 136 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (884 bp):
GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
TCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
GCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCAGTCTGGT
CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGGGACGGGCGGG
CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
AAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTA
GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGAT
CGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGACGA
Found at i:4875443 original size:26 final size:26
Alignment explanation
Indices: 4875407--4875459 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4875397 CTGGTCCGAT
* *
4875407 CTTAGACTGGGAATTAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4875433 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4875459 C
1 C
4875460 GTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4879768 original size:26 final size:26
Alignment explanation
Indices: 4879717--4879769 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4879707 CCGGTCTGAT
*
4879717 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4879743 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4879769 C
1 C
4879770 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4880897 original size:26 final size:26
Alignment explanation
Indices: 4880868--4880919 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
4880858 TGGTCCGATA
4880868 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
4880894 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAATGAACTCCGTATGC
4880920 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTATGC
Found at i:4881770 original size:26 final size:26
Alignment explanation
Indices: 4881734--4881786 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4881724 CTGGTTCAAT
4881734 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4881760 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4881786 C
1 C
4881787 CTAAGCCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4881902 original size:710 final size:710
Alignment explanation
Indices: 4881051--4882333 Score: 2189
Period size: 711 Copynumber: 1.8 Consensus size: 710
4881041 CTGGTCCGAT
*
4881051 CTTAGACTGGGAATGAACTCCGCATGCCTAAGCCGACCGACGAAACGAGCGGCCGGGTAGGGGGC
1 CTTAGACTGGGAATGAACTCCGCATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGTAGGGGGC
4881116 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
66 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
*
4881181 TAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTCGTAAATTCATACAATGGT
131 TAGGAACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTCGTAAATTCATACAATGGT
*
4881246 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACT-ACTCATTTTCTATTTTTCATGATTTTTG
196 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA-TGACTCATTTTCTATTTTTCACGATTTTTG
* *
4881310 AAACTTTTTACGATTCGGGATTTTTTAAAATTTTTTCGGAAGG-CGTTTTGGCCCAAACTTGGTA
260 AAACTTTCTACGATTCGGGATTTTTTAAAATTTTTTCGGAAGGACGTTTTGCCCCAAACTTGGTA
** * * *
4881374 GATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT-AAAATCTCGAAGTTTACA
325 GACATCATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAAT-TCGAAGTGTACA
* *
4881438 AGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGATACTTTAAAAGCTACCGGCAGCAAA
389 AGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAAAAGCTACCGACAGCAAA
4881503 CCTGTAAAATCTAAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGAGG
454 CCTGTAAAATCTAAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGAGG
* *
4881568 CCAATATAAGGGCTAAATACCTGCACCCATCGCACATCATGTGCGCACACCCCCCCGATCGCCGG
519 CCAATATAAGGGCCAAATACCTGCACCCATCACACATCATGTGCGCACACCCCCCCGATCGCCGG
4881633 AACCCCAATGCCGCCGGTCAGGTTCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
584 AACCCCAATGCCGCCGGTCAGGTTCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
4881698 CAGCATGTGCTGCCGCAAGCCTCGGTCTGGTTCAATCTTAGACTGGGAATGAACTCCATATG
649 CAGCATGTGCTGCCGCAAGCCTCGGTCTGGTTCAATCTTAGACTGGGAATGAACTCCATATG
* *
4881760 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG-CGGG-CGGACG
1 CTTAGACTGGGAATGAACTCCGCATGCCTAAGCCAACCGACGAAACGAGC-GGCCGGGTAGG--G
*
4881823 GGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
63 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* *
4881888 GTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
128 GTTTAGGAACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTCGTAAATTCATACAAT
*
4881953 GGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTT
* * * * **
4882018 TGAAACTTTCTGCGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTTGCCCCAAACTTGG
258 TGAAACTTTCTACGATTCGGGATTTTTTAAAATTTTTTCGGAAGGACGTTTTGCCCCAAACTTGG
*
4882083 TAGACATCATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTAAGCTAAAAATTCGAAGTGTAC
323 TAGACATCATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAATTCGAAGTGTAC
**
4882148 AAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACCGACAGCAA
388 AAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAAAAGCTACCGACAGCAA
* *
4882213 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGGG
453 ACCTGTAAAATCTAAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGAG
* *
4882278 GCCAATATAAGGGCCAAGTACCTGCACCCATCACACATCATGTGTGCACACCCCCC
518 GCCAATATAAGGGCCAAATACCTGCACCCATCACACATCATGTGCGCACACCCCCC
4882334 AGGCCCCCCG
Statistics
Matches: 535, Mismatches: 33, Indels: 10
0.93 0.06 0.02
Matches are distributed among these distances:
708 2 0.00
709 53 0.10
710 230 0.43
711 245 0.46
712 5 0.01
ACGTcount: A:0.27, C:0.22, G:0.23, T:0.27
Consensus pattern (710 bp):
CTTAGACTGGGAATGAACTCCGCATGCCTAAGCCAACCGACGAAACGAGCGGCCGGGTAGGGGGC
GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGAACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTCGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTGA
AACTTTCTACGATTCGGGATTTTTTAAAATTTTTTCGGAAGGACGTTTTGCCCCAAACTTGGTAG
ACATCATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAATTCGAAGTGTACAAG
ATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAAAAGCTACCGACAGCAAACC
TGTAAAATCTAAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGAGGCC
AATATAAGGGCCAAATACCTGCACCCATCACACATCATGTGCGCACACCCCCCCGATCGCCGGAA
CCCCAATGCCGCCGGTCAGGTTCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
GCATGTGCTGCCGCAAGCCTCGGTCTGGTTCAATCTTAGACTGGGAATGAACTCCATATG
Found at i:4882507 original size:26 final size:26
Alignment explanation
Indices: 4882478--4882530 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4882468 CCCATCCGAT
*
4882478 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4882504 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4882530 C
1 C
4882531 CAATGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4883408 original size:26 final size:26
Alignment explanation
Indices: 4883372--4883424 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4883362 CTGGTTTGAT
*
4883372 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4883398 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
4883424 C
1 C
4883425 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4884326 original size:26 final size:25
Alignment explanation
Indices: 4884277--4884327 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 25
4884267 TGGTCTGATA
*
4884277 TTAGACTGGAATGAACTCCGTATGC
1 TTAGACTGGAATGAACTCCATATGC
*
4884302 TTAGACTGGGAATGAACTCTATATGC
1 TTAGACT-GGAATGAACTCCATATGC
4884328 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
25 7 0.30
26 16 0.70
ACGTcount: A:0.29, C:0.18, G:0.24, T:0.29
Consensus pattern (25 bp):
TTAGACTGGAATGAACTCCATATGC
Found at i:4884682 original size:903 final size:900
Alignment explanation
Indices: 4881760--4885189 Score: 4812
Period size: 903 Copynumber: 3.8 Consensus size: 900
4881750 ACTCCATATG
* * *
4881760 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGACGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGAGGGCGGG
* *
4881825 CGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGGT
*
4881890 TTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4881955 TCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTATTTTTCACGATTTTTG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
* ** * *
4882020 AAACTTTCTGCGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGATTTTTTGCCCCAAACTTGGTA
261 AAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTTG-CCCAAACTTGGTA
* * *
4882085 GACATCATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTAAGCTAAAAATTCGAAGTGTACAA
325 GACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAA
* * * *
4882150 GATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACCGACAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
4882215 CTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGGGGC
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * ** *
4882280 CAATATAAGGGCCAAGTACCTGCACCCATCACACATCATGTGTGCACACCCCCCAGGCCCCCCGA
520 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCCCCGA
* * * * *
4882345 TTGCCGGAACCCTAATGCCATCGGTCAGGTTCTCCAACGATGCTCCGGTGATGGTGCCCCGACGA
585 TCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCC-GTGATGGTGCCCCGATGA
* * *** *
4882410 AGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCGCAACCCTCGGACCCATCC
649 AGAAAAATGCGGCACCAGCACATG-CCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTGGTCT
* *
4882475 GATCTTAGGCTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC-AATGTCA
713 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAA-GTCA
* * *
4882539 ACCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCG
777 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* * * * *
4882604 GTCGGGTCCCCCTTTGTGTGCTGCCGATCCTGCTGCCGTAACCCTCAATCCGGTCTGAT
842 GTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGTAACCCTCAGTCCGGTCCGAT
* * * * *
4882663 CTTACACTGAGAATGAACTCCGTATGCCTAAGCCAACCGATC-AAACGAGCGAGCCGGCGGGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-CGAAACGAGCGGGCGGGAGGGCGG
* * * *
4882727 GCGGGGACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGG
* * *
4882792 TTTAGGCACATCTTTATATTTCTGCGTGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
4882857 GTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTT
* * * * *
4882922 AAAACTTTTTGCGGTTCAGGATTTTTCAAAATTTTTTTGGAAGGTGTTTTCAGCCCAAACTTGGT
260 GAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGGAAAGAGTTTT-TGCCCAAACTTGGT
* * * * *
4882987 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAACTCGATGTCTACA
324 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACA
*
4883052 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTCAATGGCTACTGGCAAG-AA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-AGCAA
* *
4883116 ACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAAGAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
4883181 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCTCCCCGGCCCCC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCC-CCCCGG-CCCC
*
4883246 CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT-C--C---G----GTGATGGTGCCCCGG
581 CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGTGATGGTGCCCCGA
* * *
4883301 TGAAGAAAAATGCGGCTCCAGCACATGCCTGAGCCTTGCATGTGCTGCCGCAACCCTCGATCTGG
646 TGAAGAAAAATGCGGCACCAGCACATGCC-GAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTGG
*
4883366 TTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGT
710 TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGT
* * * * * *
4883431 CAACCCACGAAATGAACGTGCAGGCACTCAGCCCGCCAGAGGGGTGGGATGCGCAAGCCGGGGAT
775 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGAT
** * * * * * * *
4883496 CGGTCGGGTCTACCTCTACGTGCTACCGATCCTACTACCGCAACCCTTAGTCCAGTCGGAT
840 CGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGTAACCCTCAGTCCGGTCCGAT
* * * * * *
4883557 CTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGAGCGAGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGAGGGCGGG
* * * * * *
4883622 CAGGTACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGCTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGGT
*
4883687 TTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
4883752 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCACGATTTTTG
196 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
* * * * * * *
4883817 AAAGTTTGTACGGTTCGGGATTTTTTTAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGTA
261 AAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTTG-CCCAAACTTGGTA
** *
4883882 GATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAAGTCGAAGTGTACAA
325 GACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAA
*
4883947 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
4884012 CTATAAAATCTCAATTGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATTAGGGATAGGGGGC
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
*
4884077 CAATATAAGGGCCAAGCACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCCTCCG
520 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCC-CCG
* * * *
4884142 ATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGATGATGGTGACCCGATG
584 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCG-TGATGGTGCCCCGATG
* * * * *
4884207 AAGAAAAATGCGACACCAGCAAATGTCCAAGCCCAGCATGTGCTGCGGCAACCCTCGGTCTGGTC
648 AAGAAAAATGCGGCACCAGCACATG-CCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTGGTC
* *
4884272 TGATATTAGACT-GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTATATGCCTAAGTCA
712 TGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCA
* * *
4884336 ACCCACGAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGCGTAAGCCAGGGATCG
777 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCG
* * ** * * *
4884401 GCCGGGTCCCCCTCTGCGTACTACCGATCCTGCTGCTATAACCCTCGGTCTGGTCCAAT
842 GTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGTAACCCTCAGTCCGGTCCGAT
* * * * *
4884460 CTTAGATTGGGAATGAACTCTGTATGCCTAAGCCGACCGACGAAATGAGTGGGCGGGTAGGGC-G
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG-AGGGCGG
* *
4884524 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGTAAATCGTGGATCGATAGGGTGGTAGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGG
*** *
4884589 TTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
** *
4884654 GTCCCTTAAGCCTTCACGTGAAGTTTCATGATAAGATGACTCATTTTCTATTTTTCACGATTTTT
195 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTT
* * *
4884719 GAAACTTTTTGCGGTTCAGGATTTTTTAAACTTTTTTCGGAAGGCA-TTTTTG-CCAAACTTGGT
260 GAAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGGAAAG-AGTTTTTGCCCAAACTTGGT
*
4884782 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
324 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACA
* * * * * *
4884847 ACATTTTGTGACAATTTGAAAAAGGTGTCCCTATTCCAGACACTTTAATGGCCACTGGCAGCAAA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
4884912 CCTGTAAATTCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
4884977 CCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA--CCCCCTGCCCCCCG
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCCCCG
* * * *
4885040 ATCGCCGGAACCCCAAAGCCGTCAGTCAGGTTCT-C--CGA-----C--GATGGCGCCCCGACGA
584 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGTGATGGTGCCCCGATGA
* * * * *
4885095 AGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCC
649 AGAAAAATGCGGCACCAGCACATGC-CGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTGGTCT
* *
4885160 GATCTTAGAGTGGGAATGAACTACGTATGC
713 GATCTTAGACTGGGAATGAACTCCGTATGC
4885190 CTAAGCCAAC
Statistics
Matches: 2251, Mismatches: 249, Indels: 69
0.88 0.10 0.03
Matches are distributed among these distances:
886 1 0.00
887 77 0.03
888 17 0.01
890 1 0.00
892 4 0.00
893 46 0.02
894 744 0.33
895 5 0.00
896 1 0.00
897 1 0.00
898 33 0.01
899 12 0.01
901 237 0.11
902 1 0.00
903 939 0.42
904 92 0.04
905 40 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGAGGGCGGG
CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
AAACTTTTTGCGGTTCAGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTTGCCCAAACTTGGTAG
ACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTAAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCCGGCCCCCCGAT
CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGTGATGGTGCCCCGATGAAG
AAAAATGCGGCACCAGCACATGCCGAGCCTAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGAT
CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCC
ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
GGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGTAACCCTCAGTCCGGTCCGAT
Found at i:4884767 original size:25 final size:25
Alignment explanation
Indices: 4884712--4884770 Score: 66
Period size: 26 Copynumber: 2.3 Consensus size: 25
4884702 TATTTTTCAC
*
4884712 GATTTTTGAAACTTTTTGCGGTTCAG
1 GATTTTTGAAACTTTTTGCGG-TAAG
* *
4884738 GATTTTTTAAACTTTTTTCGG-AAG
1 GATTTTTGAAACTTTTTGCGGTAAG
4884762 GCATTTTTG
1 G-ATTTTTG
4884771 CCAAACTTGG
Statistics
Matches: 28, Mismatches: 4, Indels: 3
0.80 0.11 0.09
Matches are distributed among these distances:
24 3 0.11
25 6 0.21
26 19 0.68
ACGTcount: A:0.20, C:0.10, G:0.20, T:0.49
Consensus pattern (25 bp):
GATTTTTGAAACTTTTTGCGGTAAG
Found at i:4885880 original size:26 final size:26
Alignment explanation
Indices: 4885851--4885903 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4885841 TCGATCCGAT
*
4885851 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4885877 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4885903 C
1 C
4885904 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4886787 original size:26 final size:26
Alignment explanation
Indices: 4886758--4886810 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4886748 CTGGTCCGAT
4886758 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
* *
4886784 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
4886810 C
1 C
4886811 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:4887668 original size:26 final size:26
Alignment explanation
Indices: 4887639--4887691 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4887629 CCGGTCTGAT
*
4887639 CTTACACTGGGAATGAATTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
*
4887665 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
4887691 C
1 C
4887692 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:4889273 original size:881 final size:883
Alignment explanation
Indices: 4885156--4889883 Score: 5732
Period size: 877 Copynumber: 5.3 Consensus size: 883
4885146 CCTCGGTCCG
* *
4885156 GTCCGATCTTAGAGTGGGAATGAACTACGTATGCCTAAGCCAACCGACGAAACGAGCAGGTGGGC
1 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC----GGGC
* * *
4885221 GGGCAGGCGGGCTCTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTA
62 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTA
* * * **
4885286 GGAGGGTTTAGGCACATCTTAATATTACTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
127 GGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * * *
4885351 ACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCATTTTTTATTTTTCATG
192 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* * * *
4885416 ATTTTCAAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTTGGGAGGTGTTTTGGCCCCAAA
257 ATTTTCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAA
* * * *
4885481 CTTGGTAGACGTGACCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAACTAAAAACTCGAAG
322 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
** * *
4885546 TGTACAAGATTTTGTGATAATTTGAAAAAGGTGTCCCCA-TTCTAGACACTTTAATGGCCACTGG
387 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGG
*
4885610 CAGCAAACCTGTAAATTCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
451 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
*
4885675 TAGGGGGCCAATATAAGGGCCAAGT------ACCCATTGCACATCATGTGCGCACA--------C
516 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * *
4885726 CCCCCGATCGCCGGAACTCCAAT---GCC-GTCA-G---TCA-GC--TTCTCCGACGA---TGCT
581 CCCCCGATCG-CGGAACCCCAATGCCGCCGGTCAGGTTCTCAGGCGATGCTCCGACGATGGTGCC
* ** * * *
4885777 CCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAATCCTAGTT
645 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGT
*
4885842 CGA-TCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
710 CCAGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
4885906 AAGTCAACCCACGAAATGAGCGTGTGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGG
775 AAGTCAACCCACGAAACGAGCGTG-CGGCGCTCAGCCGGCCAGAGGGGCGGG--G-G--A--T-C
* * *
4885971 GGATCGACCGGGTCCCCTTCTGCGTGCTGTCGATCCTACTGCCACAACCCTC-GATCT
831 GG-T----CGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCAGATGT
* *
4886028 GATCCCATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGGGCGGGCGGG
1 G-TCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA----CGAGCGGG
* * * *
4886093 CGGGCGGGCTGGTGGGCACTACGTCGGCTAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGG
61 CGGGCGGGC----GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGG
*
4886158 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGTTTGTAAA
122 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAA
* *
4886223 TTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGAAAGACGACTCGTTTTCTATTTT
187 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
** ** **
4886288 TCACGATTTTTGAAACTTTTTATGAATCGGGATTTTTTAAAATTTTTTTGGAAGGTTTTTTGGCC
252 TCACGATTTTCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC
*
4886353 CCAAACTTGGTAGACGTGATCTTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
317 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * * *
4886418 CAAAGTGTACAAGATTTTGTGACAATTTGAAAAAAGTATCCCCATTTCAGACAATTTAATGGCTA
382 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * *
4886483 CTGGCATCAAACCTGTAAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTT-TTGAGGTTTGATGA
447 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
*
4886547 GGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTGCGCACACACCC
512 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCC
* * * * * *
4886612 CGTCGG-CCCCCAATCGCTGGAACCCCAATGCCGTCGATCAGGTTTTCCGGCGATGCTCC-AGTG
576 C--CGGCCCCCCGATCGC-GGAACCCCAATGCCGCCGGTCAGGTTCTCAGGCGATGCTCCGA-CG
* *
4886675 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGGATGTGCTACCGTAA
637 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA
** * * *
4886740 CCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAAATCCGTATGCTTAGACTGGGAATGAACTCT
702 CCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCC
*
4886805 GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATG-T
767 GTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGGCGGG-GGAT
* * ** * ** *
4886869 GCAAGACGGGGAT-CGGC-C-G-GGGC--CCCCT-CTACGTG---CTA---TC-GA---
830 -C-GGTC-GGG-TCCCCCTCTGCGTGCTGCCGATCCTAC-TGCCACAACCCTCAGATGT
* * *
4886911 -TCC--TGC-T-G-CTGGGAATGAACTCCATATGCCTAAGCCAACCGACAAAACAAGCGGGCGGG
1 GTCCGAT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
* * * *
4886970 CGGGCGGGCTGGCACTACACTGGCCAGAAAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
65 CGGGC--G--GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGT
* *
4887035 AGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATCCA
126 AGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
*
4887100 TACAATGGTCCCTTAAGCCTTCATGTGAAG-TTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
191 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
* * * * * **
4887164 GATCTTCCAAACTTTTAATGGTTCGGGATTTTTTGAAATTTTTTTGAAAGGAGTTTTGGGGCCAA
256 GATTTTCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAA
* *
4887229 ACTTGGTACACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAA
321 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
*
4887294 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGG
386 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
*
4887359 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCGAGGTTTGATGAGGGA
451 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
* * * *
4887424 TTGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCTTGTGCGCACACCCCCCGGC
516 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
*
4887489 CCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGGCGATGCTTCAGCGATGCTCCG
581 CCCCCGATCG-CGGAACCCCAATGCCGCCGGTCAGG-T-TCT--C-A-G-----GCGATGCTCCG
**
4887554 ACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-TTG
634 ACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
4887618 TAACCCTCAGTCCGGTCTGATCTTACACTGGGAATGAA-TTCCGTATGCTTAGACTGGGAATGAA
699 TAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTT-CGTATGCTTAGACTGGGAATGAA
* * *
4887682 CTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGAAGCTCAGCCGGCTAGAGGGGCGGGA
763 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG-CGCTCAGCCGGCCAGAGGGGCGGG-
* * * **
4887747 TGTGCAAGTCGGGGATCAGTCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTACCGTAACCCTC-
826 -G-G--A-TC---G----GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCA
*
4887811 GATCT
879 GATGT
* * * *
4887816 GGTCTGATCTTAGACTGAGAATGAACTCTGTATGCCTAAGTCAACCGACGAAACGAGCGAGCGGG
1 -GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-CGAGCGGG
* * * *
4887881 CGGGCGGGAGGGCACTACGTCGGCAAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGT
61 CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGT
* *
4887946 AGGTCGGTTTAGGCACATCTTCATATTTCTGTGTTCCAATGCCATTTTTATGGCTTGTAAATTCA
126 AGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCA
* * *
4888011 TACAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGACAAGACGGCTCGTTTTCTATTTTTCAC
191 TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC
** * ** * *
4888076 GATTTTTGAAACTTTTTGTGGTTTAGGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAA
256 GATTTTCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAA
*** * * *
4888141 ACTTAACAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATGCAGCTAAAAACTCGAA
321 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
4888206 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
386 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
4888271 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTAGAGGTTTGCTGAGGGA
451 CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA
*
4888336 TAGGGGGCCAATATAAGGGCCAAGTACCAACACCCATCGCACATCATGTGCGCACACCCCCCGGC
516 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* *
4888401 CCCCCGATCGTCGGAACCCCAAAGCCGCCGGTCAGGTTCTCAGGCGATGCTCCGACGATGGTACC
581 CCCCCGATCG-CGGAACCCCAATGCCGCCGGTCAGGTTCTCAGGCGATGCTCCGACGATGGTGCC
* * *
4888466 CCGACAAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTTCCGCAACCCTCGGT
645 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGT
* *
4888531 CCAGTCCGATCTTAGACTGGGAATGAACTTTGTAGGCTTAGACTGGGAATGAACTCCGTATGCCT
710 CCAGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
4888596 AAGTCAACCCACGAAACGAGCATGCGGCACTCAACCGGCCAGAGGGGC-GGGGATCGGTCGGGTC
775 AAGTCAACCCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGGGATCGGTCGGGTC
* * *
4888660 CCCCTCTGCGTGTTGCCGATCCTACTGTCACATCCCTCAG-TGT
840 CCCCTCTGCGTGCTGCCGATCCTACTGCCACAACCCTCAGATGT
* * * * *
4888703 AGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAATCAACGAAACGAGCGGGCAGG
1 -GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
* * * * *
4888768 TGGGCGGGCACTACCCCGGCAATAGAGACGGGATGCGCAAGCCGTGGATTGATAAGGTGGTAGGT
65 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGT
* *
4888833 GGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCACACA
130 GGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* ** *
4888898 ATGGTCCCTTAAGGCTTCACGTGAAGTTT-AACGCAAGACGACTCGTTTTCTATTTTTCATGATT
195 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* *** * * * *
4888962 TTCAAAACTTTTTACGGTTC-GGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCACACAT
260 TTCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTT
* *
4889026 GGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAACATTCAGCTAAAAACTCGAAGTGT
325 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
4889091 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
390 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
*
4889156 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGA
455 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
4889221 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCC
520 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCC
* * * * **
4889285 C-ATCGCGAGGACCCTAATGCCGCCGGTCAGGTTCTCTA-GCAATGCTTCGGTGATGGTGCCCCG
585 CGATCGCG-GAACCCCAATGCCGCCGGTCAGGTTCTC-AGGCGATGCTCCGACGATGGTGCCCCG
4889348 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCAGTCTA
648 ACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CC-C--TC--
* * * *
4889413 GTTTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTAGGAATGAACTCCATATGCTTAGA
707 G---G-TC-----C-----A-G---TCCG-AT-CTTAGACTGGGAATGAACTTCGTATGCTTAGA
*
4889478 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCA
752 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCA
* * * ** * * **
4889543 GAGGGGCGGGATGCGCAAGCAGGGGATCGGCCGGGTCCCTCTCTACGTGCTATCGATCTTGCTAT
816 GA------GG--G-GC--G--GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTGC
**
4889608 CGTAACCCTCAGATCG-
868 CACAACCCTCAGAT-GT
* * * *
4889624 GTCCGATCCTAGACCT-GGAATGAACTTCGTATGCCTAAGCCAACCGACGAAGCGAGCGGGCGGA
1 GTCCGATCTTAGA-CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGG
*
4889688 CGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC-TGGATCGAT-AGTGTGGTAGG
65 CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAG-GTGGTAGG
**
4889751 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
129 TGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
* *
4889816 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAATTTTCATGAT
194 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
4889881 TTT
259 TTT
4889884 GTGACCATTT
Statistics
Matches: 3351, Mismatches: 345, Indels: 272
0.84 0.09 0.07
Matches are distributed among these distances:
870 3 0.00
871 34 0.01
872 258 0.08
873 286 0.09
875 1 0.00
876 41 0.01
877 424 0.13
878 6 0.00
879 102 0.03
880 14 0.00
881 397 0.12
882 137 0.04
883 161 0.05
884 1 0.00
885 1 0.00
886 7 0.00
887 84 0.03
888 2 0.00
889 4 0.00
890 1 0.00
891 11 0.00
892 26 0.01
893 1 0.00
894 9 0.00
895 4 0.00
896 8 0.00
897 9 0.00
898 2 0.00
899 2 0.00
900 7 0.00
901 90 0.03
902 97 0.03
903 12 0.00
904 2 0.00
905 74 0.02
906 78 0.02
907 110 0.03
908 2 0.00
909 2 0.00
910 4 0.00
911 171 0.05
912 366 0.11
913 1 0.00
914 2 0.00
915 17 0.01
918 2 0.00
919 106 0.03
920 168 0.05
921 3 0.00
922 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (883 bp):
GTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC
GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGTG
GGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
TCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTG
GTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
GATCGCGGAACCCCAATGCCGCCGGTCAGGTTCTCAGGCGATGCTCCGACGATGGTGCCCCGACG
AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCAGTC
CGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA
ACCCACGAAACGAGCGTGCGGCGCTCAGCCGGCCAGAGGGGCGGGGGATCGGTCGGGTCCCCCTC
TGCGTGCTGCCGATCCTACTGCCACAACCCTCAGATGT
Found at i:4889458 original size:26 final size:26
Alignment explanation
Indices: 4889420--4889498 Score: 131
Period size: 26 Copynumber: 3.0 Consensus size: 26
4889410 CTAGTTTGAT
*
4889420 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
4889446 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCGTATG
4889472 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4889498 C
1 C
4889499 CTAAGTCAAC
Statistics
Matches: 48, Mismatches: 5, Indels: 0
0.91 0.09 0.00
Matches are distributed among these distances:
26 48 1.00
ACGTcount: A:0.29, C:0.19, G:0.24, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4891259 original size:26 final size:26
Alignment explanation
Indices: 4891223--4891275 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4891213 CCGGTCCGAT
4891223 CTTAGAATGGGAATGAACTCCATATG
1 CTTAGAATGGGAATGAACTCCATATG
* *
4891249 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCATATG
4891275 C
1 C
4891276 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCATATG
Found at i:4891326 original size:185 final size:185
Alignment explanation
Indices: 4891030--4891433 Score: 558
Period size: 185 Copynumber: 2.2 Consensus size: 185
4891020 CCCTCGGTCT
* * * *
4891030 GGTCCGATCTTAGACTGGGAATGAACTCCATACGCTTAGACTATGAATGAACTTCGTATGCCTAA
1 GGTCCGATCTTAGAATGGGAATGAACTCCATATGCTTAGACTAGGAATGAACTCCGTATGCCTAA
* * *
4891095 GTCAACCCATGAAACGAGCGTGCGGGCACTCAACCGGGCAGAGGGGTGGGATACGCAAGCCGGGG
66 GTCAACCCATGAAACGAGCATGCGGGCACTCAACCGGCCAGAGGGGTGGGATACACAAGCCGGGG
* * * * *
4891160 ATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGTTACCGCAACCTTCAGCCC
131 ATCGACCGGGTCCCCATCTGCATGCTGCCGATCCTGCTACCGCAACCCTCAACCC
*
4891215 GGTCCGATCTTAGAATGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
1 GGTCCGATCTTAGAATGGGAATGAACTCCATATGCTTAGACTAGGAATGAACTCCGTATGCCTAA
* * * * *
4891280 GTCAACGCATGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGTCGGGG
66 GTCAACCCATGAAACGAGCATGCGGGCACTCAACCGGCCAGAGGGGTGGGATACACAAGCCGGGG
* * * * * *
4891345 ATCGACTGGGTCCCCATCTGTATGCTGTCGATCCTGCTGCTGCAACCCTCAATCC
131 ATCGACCGGGTCCCCATCTGCATGCTGCCGATCCTGCTACCGCAACCCTCAACCC
* *
4891400 GGTCTGATCTTAG-ATAGGGAATGAACTCCGTATG
1 GGTCCGATCTTAGAAT-GGGAATGAACTCCATATG
4891434 GCTAAGCCAA
Statistics
Matches: 192, Mismatches: 26, Indels: 2
0.87 0.12 0.01
Matches are distributed among these distances:
184 2 0.01
185 190 0.99
ACGTcount: A:0.23, C:0.27, G:0.29, T:0.21
Consensus pattern (185 bp):
GGTCCGATCTTAGAATGGGAATGAACTCCATATGCTTAGACTAGGAATGAACTCCGTATGCCTAA
GTCAACCCATGAAACGAGCATGCGGGCACTCAACCGGCCAGAGGGGTGGGATACACAAGCCGGGG
ATCGACCGGGTCCCCATCTGCATGCTGCCGATCCTGCTACCGCAACCCTCAACCC
Found at i:4892147 original size:26 final size:26
Alignment explanation
Indices: 4892117--4892169 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4892107 TCCGTCCGAT
4892117 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4892143 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4892169 C
1 C
4892170 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4893048 original size:26 final size:26
Alignment explanation
Indices: 4893004--4893064 Score: 90
Period size: 26 Copynumber: 2.4 Consensus size: 26
4892994 CCCTCGGTCC
4893004 AATCCG-AT-CTTAGACTGGGAATGA
1 AATCCGTATGCTTAGACTGGGAATGA
* *
4893028 ACTCTGTATGCTTAGACTGGGAATGA
1 AATCCGTATGCTTAGACTGGGAATGA
4893054 AATCCGTATGC
1 AATCCGTATGC
4893065 CTAAGTCAAC
Statistics
Matches: 31, Mismatches: 4, Indels: 2
0.84 0.11 0.05
Matches are distributed among these distances:
24 4 0.13
25 2 0.06
26 25 0.81
ACGTcount: A:0.30, C:0.18, G:0.25, T:0.28
Consensus pattern (26 bp):
AATCCGTATGCTTAGACTGGGAATGA
Found at i:4893471 original size:26 final size:26
Alignment explanation
Indices: 4893441--4893497 Score: 69
Period size: 26 Copynumber: 2.2 Consensus size: 26
4893431 GACGACTCAT
** *
4893441 TTTTTATTTTTCACGATTTTTGAAAC
1 TTTTTATGGTTCACGATTTTTGAAAA
* *
4893467 TTTTTGTGGTTCACGATTTTTTAAAA
1 TTTTTATGGTTCACGATTTTTGAAAA
4893493 TTTTT
1 TTTTT
4893498 TCGAAAGGAG
Statistics
Matches: 26, Mismatches: 5, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.21, C:0.09, G:0.11, T:0.60
Consensus pattern (26 bp):
TTTTTATGGTTCACGATTTTTGAAAA
Found at i:4893536 original size:900 final size:888
Alignment explanation
Indices: 4891217--4893640 Score: 3358
Period size: 903 Copynumber: 2.7 Consensus size: 888
4891207 TTCAGCCCGG
* *
4891217 TCCGATCTTAGAATGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
1 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * *
4891282 CAACGCATGAAACGAGCATGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGTCGGGGAT
66 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGAT
*
4891347 CGACTGGGTCCCCATCTGTATGCTGTCGATCCTGCTGCTGCAACCCTCAATCCGGTCTGATCTTA
131 CGACCGGGTCCCC-TCTGTATGCTGTCGATCCTGCTGC-GCAACCCTCAATCCGGTCTGATCTTA
* * *
4891412 GA-TAGGGAATGAACTCCGTATGGCTAAGCCAAC-C-AACGAA--ACGA--GCGGGCGGGCAGGC
194 GACT-GGGAATGAACTCCGTATGCCTAAGCCAACGCAAACGAACGGCGAGGGCGGGCGGGCGGGC
* * *
4891470 ACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
258 ACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGG
* ***
4891535 CATATCTTCATATTTCTATG--TGCCAATAACATTTTTATGGCTTGTAAATTCATACAATGGTCC
323 CACATCTTCATATTT-T-TGCATGCCAATGTGATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * **
4891598 TTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGACTAATTTTCTATTTTTCACGATTTTAAAAA
386 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAA
* * * *
4891663 CTTTTTCCGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGTCCCCAAACTTGGTAGAC
451 CTTTTTACGGTTCA-GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGAC
*
4891728 ATGATCCTTGTATTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTTACAAGAT
515 GTGATCCTTGTATTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTG-TACAAGAT
* * * *
4891793 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAGTGGCTACTGGCAGCAAACCTG
579 TTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTA
*
4891858 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGAGCCAA
644 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAA
*
4891923 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCG
709 TATAAGGGCCAAGTACCAGAACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCG
*
4891988 CCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCGCTAGCGATGGTGCCCCGATGAAGA
774 CCAGAACCCCAATGCCGCCGGTCAGGTTCT-C--C---GCG--AGCGATGGTGCCCCGATGAAGA
* * * *
4892053 AAAATGCAGCACCAGCACATGCCTGAGCCCAGCAAGTGCTGCCACAACCCTCGGTCCG
831 AAAATACAGCACCAGCACATCCCCGAGCCCAGCAAGTGCTGCCACAACCCTCGGTCCA
4892111 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
1 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * *
4892176 CAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCTGGGGAT
66 CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGAT
*** * * * **
4892241 CGACCAACTCCCCCTCTGTGTGCTG-CTGATCCTGCTACCGTAACGGTCAATCCGGTCTGATCTT
131 CGACCGGGT-CCCCTCTGTATGCTGTC-GATCCTGCT-GCGCAACCCTCAATCCGGTCTGATCTT
* * *
4892305 AGACTGAGAATGAAGTCCATATGCCTAAGCCAAACCGACGAAACGAACAGGC--GGGCGGGCGGG
193 AGACTGGGAATGAACTCCGTATGCCTAAGCC-AA-CG-C-AAACGAAC-GGCGAGGGCGGGCGGG
* * * *
4892368 CGGGCACTATGCCGACCAGAGAAACGGGATGTGCAAGCCATGGATCGATATGGTGGTAGGTGGGT
253 CGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
* * * *
4892433 TTAGGCACATCTTTATAGTTCTGCATCCCAATGTGATTTTTATGGCTTGTAAATTCATACAATGG
318 TTAGGCACATCTTCATATTTTTGCATGCCAATGTGATTTTTATGGCTTGTAAATTCATACAATGG
* *
4892498 TCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
383 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTG
* *
4892563 AAACTTTTTACGGTTCGAGA-TTTTTAAAATTTTTTCGAAAAAGAGTTTTGGCCCCAAACATGGT
448 AAACTTTTTACGGTTC-AGATTTTTTAAAATTTTTTCG-AAAGGAGTTTTGGCCCCAAACTTGGT
*
4892627 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACA
511 AGACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
** *
4892692 AGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTGGGACACTTTAATGGCTACTGGTAGCAAA
575 AGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
4892757 CCTATAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCGCGGTTTGATGAGGGATAGGGGG
640 CCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAG
4892822 CCAATATAAGGGCCAAGTACCAGAACCCATCGCTA-ATCATGTGCGCACATCCCCCCCGGCCCCC
705 CCAATATAAGGGCCAAGTACCAGAACCCATCGC-ACATCATGTGCGCACA-CCCCCCCGG-CCCC
** ** *
4892886 CCGATCGCCAGAACCTTAATTTCGTCGGTCAGGTTCT-C-CG-GCGATGGTGCCCCGATGAAGAA
767 CCGATCGCCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGAGCGATGGTGCCCCGATGAAGAA
** * *
4892948 AAATATGGCACCAGCACATCCCCGAGCCCAGCATGTGCT-CTCGCAACCCTCGGTCCAA
832 AAATACAGCACCAGCACATCCCCGAGCCCAGCAAGTGCTGC-CACAACCCTCGGTCC-A
* *
4893006 TCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAAATCCGTATGCCTAAGT
1 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * *
4893071 CAACCCACGAAACGAGCGTACGGGGCGCTCAGCCGGCCAGAAGGGCGAGATGCATC-AGCCAGGG
66 CAACCCACGAAACGAGCGTGC-GGGCGCTCAGCCGGCCAGAGGGGTGGGATGCA-CAAGCCGGGG
* * ** *
4893135 ATCGACCGGGTCCTCCTCTGCATGCCGTCGATCCTGCTGTCGCAACCCTCGGTTCGGTCTGATCT
129 ATCGACCGGGTCC-CCTCTGTATGCTGTCGATCCTGCTG-CGCAACCCTCAATCCGGTCTGATCT
4893200 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGGCAAAAC-AAGCGGGCGAGTGTGCGGGC
192 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-C-GC-AAACGAA-C-GGCGAG-G-GCGGGC
* *
4893264 GGGCGGGCAGCTATGCCGGCCAGAGAGACGGGATGCGCAAGCCTTGGATCGATAGGGTGGTCGGT
250 GGGCGGGCA-CTATGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
*
4893329 GGGTTTATGCACATCTTCATATTTTTGCATGCCAATGTGATTTTTATGGCTTGTAAATTCATACA
314 GGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGTGATTTTTATGGCTTGTAAATTCATACA
* *
4893394 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACGACTCATTTTTTATTTTTCACGATT
379 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATT
**
4893459 TTTGAAACTTTTTGTGGTTCACGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTT
444 TTTGAAACTTTTTACGGTTCA-GATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTT
** * *
4893524 AATAGACGTGATCCTTGTATTTTTTTTGCCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGT
508 GGTAGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGT
* *
4893589 ACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTCCAGACACTTTAAT
572 ACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAAT
4893641 NNNNNNNNNN
Statistics
Matches: 1353, Mismatches: 137, Indels: 74
0.87 0.09 0.05
Matches are distributed among these distances:
893 2 0.00
894 263 0.19
895 104 0.08
896 111 0.08
897 5 0.00
898 2 0.00
899 16 0.01
900 319 0.24
901 25 0.02
902 17 0.01
903 405 0.30
904 49 0.04
905 35 0.03
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
CAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGAT
CGACCGGGTCCCCTCTGTATGCTGTCGATCCTGCTGCGCAACCCTCAATCCGGTCTGATCTTAGA
CTGGGAATGAACTCCGTATGCCTAAGCCAACGCAAACGAACGGCGAGGGCGGGCGGGCGGGCACT
ATGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
ATCTTCATATTTTTGCATGCCAATGTGATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTT
TACGGTTCAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
CTTGTATTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGA
CCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATC
TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGG
GCCAAGTACCAGAACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCAGAAC
CCCAATGCCGCCGGTCAGGTTCTCCGCGAGCGATGGTGCCCCGATGAAGAAAAATACAGCACCAG
CACATCCCCGAGCCCAGCAAGTGCTGCCACAACCCTCGGTCCA
Found at i:4898036 original size:25 final size:24
Alignment explanation
Indices: 4898008--4898056 Score: 89
Period size: 25 Copynumber: 2.0 Consensus size: 24
4897998 GTCCGATCTT
4898008 AGACTGGGAATGAACTTCCGTATGC
1 AGACTGGGAATGAACTT-CGTATGC
4898033 AGACTGGGAATGAACTTCGTATGC
1 AGACTGGGAATGAACTTCGTATGC
4898057 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
24 7 0.29
25 17 0.71
ACGTcount: A:0.29, C:0.18, G:0.29, T:0.24
Consensus pattern (24 bp):
AGACTGGGAATGAACTTCGTATGC
Found at i:4898922 original size:25 final size:26
Alignment explanation
Indices: 4898881--4898930 Score: 75
Period size: 25 Copynumber: 2.0 Consensus size: 26
4898871 TGTCCGATCT
4898881 TAGACTGGGAATAAACTCCGTATGCA
1 TAGACTGGGAATAAACTCCGTATGCA
* *
4898907 TAGACT-GGAATGAACTCTGTATGC
1 TAGACTGGGAATAAACTCCGTATGC
4898931 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 1
0.88 0.08 0.04
Matches are distributed among these distances:
25 16 0.73
26 6 0.27
ACGTcount: A:0.32, C:0.18, G:0.24, T:0.26
Consensus pattern (26 bp):
TAGACTGGGAATAAACTCCGTATGCA
Found at i:4899820 original size:26 final size:26
Alignment explanation
Indices: 4899781--4899831 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
4899771 TTGATCCGAT
*
4899781 CTTAGACTCAGAATGAACTCTGTATG
1 CTTAGACTCAGAATAAACTCTGTATG
**
4899807 CTTAGACTGGGAATAAACTCTGTAT
1 CTTAGACTCAGAATAAACTCTGTAT
4899832 TCCTAAGTCA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.18, G:0.20, T:0.31
Consensus pattern (26 bp):
CTTAGACTCAGAATAAACTCTGTATG
Found at i:4899984 original size:902 final size:901
Alignment explanation
Indices: 4896222--4907159 Score: 12615
Period size: 902 Copynumber: 12.2 Consensus size: 901
4896212 TTGACTGGAA
* * * *
4896222 AATGAAACTCCGTATGCCTTAAGTTAACCCACGAAACGAGCGT--GAGCGC-CCAGCGGCCAATG
1 AATG-AACTCCGTATGCC-TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCC-A-G
* * * **
4896284 AGGGGAGTGATGCGCAAGCCGGGGATC-GCCAGCGTCCCCCTCTGCGTGCTATCGAATCCTGCTA
62 AGGGGCGGGATGCGCAAGCCGGGGATCAG-C-GGGT-CCCCTCTGCGTGCTGCCG-ATCCTGCTA
* * * * * *
4896348 CTGCAACCATCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAAGTCAA
123 CTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CCGA
* * * ** * * *
4896413 TG-AACTAGCGGGCGGGAGACGGGCAGTGCACTCACG-CGG-CAGAGAAGACGGAATGCACAAGC
187 CGAAACGAGCGGGCGGGCGGTGGGC-GGGCACT-ACGCCGGCCAGAG-AGACGGGATGCGCAAGC
* *
4896475 TGTGGATCGATAGGGTGGTAGGTTGAGTTTAGGCAC-TCTTCATATTTCTGC-TGCCAATTGCCA
249 CGTGGATCGATAGGGTGGTAGG-TGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA-TGCCA
** * *
4896538 TTTTTATATCTTGTGAATTCATACAATGGTCCCTTAAACCCTTCACGTGAAGTTTCATGGCAAGA
312 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * *** * * *
4896603 TGAACTCATTTT-TATTTTTCAACGGTTTTTCAAAAACTTTCACGATTCAGGATTTTTTAAAA-T
376 CG-ACTCGTTTTCTATTTTTC-ATGATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATT
** * * * *
4896666 TTCCCAAGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATTCCTGTGTATTTTGTTTGGCATG
438 TTTTC-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA-TCCT-TGTATTTTTTTTGGCATG
*
4896731 CACAAAAAAATTCAGCTAAAAAATGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATA-TGT
500 CACAAAAAAATTCAGCTAAAAACT-CGAAGTGTACAAGATTTTGTGACCATTTGAAAAA-AGTGT
*
4896795 CCCCATTTTCAGACACTTTAAT-GCTACTGGCAGCCAACC-GTAAAATCTCAAATGCTCTTTAA-
563 CCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
*
4896857 GGTGT-TGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA-CAGCACC
627 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * ** * * * * **
4896919 CATCGCACATCATGTGCGCACA--CCCTCGACCCACCCGATTTTCAGAACCGCGATTCCACCGGT
692 CATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGT
* * *
4896982 CAGGTTC-CCTGACGATGCTCCGACGATGGTGCTCC-GTGAAG-AAAATACGGCACCAGCACATG
757 CAGGTTCTCC-GACGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATG
* * * * * * * * *
4897044 CTCGAGCCCAGCATGTACTGCAGTAACCATTGGTCTTGATCTGATCCTAGACTGGGAATGAACTC
821 CCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTC-CGATCCGATCTTAGACTGGGAATGAACTC
* *
4897109 CGTAAGCTTAGACTTGG
885 CGTATGCTTAGACTGGG
* *
4897126 AAT-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCTGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGA-GG
* * * * * ***
4897189 GGCGCGATGCGTAAGCTGGGGATC-GACTGGGTCCCCCTATGCGTGCTGCCGATCCTGGTACCAA
65 GGCGGGATGCGCAAGCCGGGGATCAG-C-GGGT-CCCCTCTGCGTGCTGCCGATCCTGCTACTGC
* * * * *
4897253 AACCCTCAGTCCGGTCTGATCTTAGACTAGG-ATGAACTTCGTATGCCTAAGCCAACCGATGAAA
127 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* *
4897317 CGAGCAGGCGGGCGGGCGG-GCCGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCGG
192 C--G-A-GCGGGCGGGCGGTG--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* ** *
4897381 TGG-TCGATAGGGTGGTAGGGTTGGTTTAGGCACATCTTCATTATTTCTATGTTGCCGATGCCAT
251 TGGATCGATAGGGTGGTA-GGTGGGTTTAGGCACATCTTCA-TATTTCTGCG-TGCCAATGCCA-
* * *
4897445 TTTTTATGG--TGTAAATTCGTACCATGGTCCCTTAAGCGCCTCACGTGAAGTATTTCATGGTCA
312 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC-CTTCACGTGAAG--TTTCATGG-CA
* * * ***
4897508 AG-CGACTCATTGTCTATTTTTCACGAGTTTCAAAAACTTTTT-ACGGTTCGGGATTTTTTAAAA
373 AGACGACTCGTTTTCTATTTTTCATGA-TTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAA
*
4897571 TTTTTTTC-GATAGGGGTTTTTGGCCCCAAGACTTGGGTAGACGTTGGATCCCTTGTATTTTTTT
436 -TTTTTTCGGA-AGGAG-TTTTGGCCCCAA-ACTT-GGTAGACG-T-GAT-CCTTGTATTTTTTT
* *** * *
4897635 TGGCATGTATTTAAAGATTTAGCTAAAAAACTCGAAGTGTTACAAGATTTTGTGACCATTTGAAA
493 TGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTG-TACAAGATTTTGTGACCATTTGAAA
* * *
4897700 AAAGTTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCCAAACTTTTAAAATCTCCAAATT
556 AAAG-TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-CAAACCTGTAAAATCT-CAAA-T
* * * *
4897765 GCGCTTTAA-GGGGTGTGAGTTCTTGAGGGTTTGATGAGGGGTTACGGGGGCCTAATATAAGGTC
617 GCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGA-GGGATA-GGGGGCC-AATATAAGGGC
* * *
4897829 CAAGTTACCAGCACCCCAT-TCACAACTCATGGTTGCCGCTACCATGCCCGCCGGCACCCCCCGA
678 CAAG-TACCAGCA-CCCATCGCAC-A-TCAT-G-TG-CGC-A-CA-CCCCCCCGGC-CCCCCCGA
* *
4897893 TCGTAGGAGCCCCAATGCCGTC--T--GG-T-T-C-A--A-G-T-------T--TGCCCCGGCGA
732 TCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGCGA
* * * * *
4897937 AGAAAAATACGGCACCAGCACATGCCCGACGACCGGCATGTGCTG-TCGCAACCCTC-GTCTGGT
797 AGAAAAATGCGGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGAT
4898000 CCGATCTTAGACTGGGAATGAACTTCCGTATGC--AGACTGGG
860 CCGATCTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTGGG
*
4898041 AATGAACTTCGTATGCCTAAGTCAACCCACGAAA-GAGCGTGCGGGCGCTCAACCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * ***
4898105 GCGGGATGCGCAAGCCAGGGATCGGCCGGTCCCCCTCTGTGTG-TTTAGATCCTGCTA-TCGCAA
66 GCGGGATGCGCAAGCCGGGGATCAGCGGGT-CCCCTCTGCGTGCTGCCGATCCTGCTACT-GCAA
* * * *
4898168 CCCTCGGTCTAGTTTGATCTTAGACTAGGAATGGAACTCCGTATGCCTAAGCCAACCGAC-AAAA
129 CCCTCGGTCTGGTCTGATCTTAGACTGGGAAT-GAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * *
4898232 TAGCAGGCGGGC-----GCGGACACTACGCCAGCTCAGAGAGACGGGATGCGCAAGCCGTGGATC
193 GAGCGGGCGGGCGGTGGGCGGGCACTACGCCGGC-CAGAGAGACGGGATGCGCAAGCCGTGGATC
* * *
4898292 GATAGGGTGGTAGGTGGGTTTAGGCACAT-TTAATATTTTTGCGTGACAATGGCCATTTTTAATG
257 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAT-GCCATTTTT-ATG
* *
4898356 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTCATAGCAAGACAACTCGTT
320 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
4898420 TTCTATTTTT-ATGATTTTTGAAACTTTTTGCGG-TCGAGATTTTTTAAAATTTTTT-GGATGGG
385 TTCTATTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* *
4898482 GTTGTGGCCCCAAACTTGGTAGAC-TGATCCTTGTATTTTTCTTGGCA-GCACAAAAAACA-TCA
450 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA-ATTCA
* * *
4898544 GGTAAAAAATCGAAGTGTACAAGATTTTGTGACCA-TTGAAAAAAGTGTCCCCATTTCAGACAAT
514 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
4898608 TTAATGGCTACTGGCAGCAAACCCGTAAAATCTAAAATGCTCTTTAA-GGGGTGTGAGTTTTCGA
579 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * * *
4898672 GGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCCGTACCCATCGCACATCTTGTGC
644 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* *
4898737 GTACA-CCCCCCGGCCCCCCCGATCGTCGG-A-CCCAATGCCGTCGATCAGG---T-------T-
709 GCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* * * *
4898788 CTCCGACGATGGTG-CCCGGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCGTATG
774 CTCCGACGATGGTGCCCCGG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * *
4898852 CTGCCGCAACCCTTGGTCCTG-TCCGATCTTAGACTGGGAATAAACTCCGTATGCATAGACT-GG
838 CTGCTGCAACCCTCGGTCC-GATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * *
4898915 AATGAACTCTGTATGCCTAAGTCAACCCAAGAAACTAGCGTGCGGGCGCTCAGCTGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * * ***
4898980 GTGGGATGCGTAAGCCGGGGATCGGTCGGGTCCCTTTTGCGTGCTGCCGATCCTGCTACCATAAC
66 GCGGGATGCGCAAGCCGGGGATCAG-CGGGTCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAAC
* *
4899045 CCTCAGTCTGAT-TGGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
130 CCTCGGTCTGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * * ** ** **
4899109 AGCGAGTGGGCAGGTGGGCGGGCACTACGTCGGCCAGAGAGACATGATGCGTTAGTGGTGGATCG
194 AGCGGGCGGGC-GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * * ** *
4899174 ATAGGGTGGTAGGTGGGTTTAGGTACATCTTGATAATTCTATGTGGCAATGCCATTTTTATGGCT
258 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCT
* *
4899239 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTTT
323 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* *
4899304 TATTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTCTCGGAAGGCGTT
388 TATTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * *
4899369 TTGGCCCCAAACTTGGTAGTCATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAACTA
453 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
* **
4899434 AAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAACCTGTCCCCATTTCAGACACTTTAA
518 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
4899499 TGGCTACTAGCAGCAAACCCGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTTCTCGAGGTT
583 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG-T
*
4899564 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCA
647 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * * * **
4899629 CACCCCTCCGGCCCCCCCGATCGCCGGAACCCTAATGCTGTTAGTCAGGTTCTCCGACGATGCTC
712 CACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTC
** * *
4899694 CGGTGATGGTGCCCCGGTGAAG-AAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
777 CGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * ** ** *
4899758 TGTAACCATCGGTTTGATCCGATCTTAGACTCAGAATGAACTCTGTATGCTTAGACTGGG
842 TGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * *
4899818 AATAAACTCTGTATTCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * ** * *
4899883 GTGGGATGCACAAGCCGGGGATCAGCGGGTCCCCTCTGCGTGC-GATTGATCCTACTACTGCAAG
66 GCGGGATGCGCAAGCCGGGGATCAGCGGGTCCCCTCTGCGTGCTG-CCGATCCTGCTACTGCAAC
* * *
4899947 CCTCAGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
130 CCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA
* *
4900012 GCGGGCGGGC--T-GGCGGACACCACGCCGGCCAGAGAGACGGGATGCGCAAG-CGATGGATCGA
195 GCGGGCGGGCGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG-TGGATCGA
* * * * *
4900073 TAGGCTGGTAGGTGGGTTTAGGTACATCTTCATAATTCTGCATGGCAATGCCATTTTTATGGCTT
259 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTT
* *
4900138 GTAAATTCATACAATGGTCCCTGAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTTCT
324 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
4900203 ATTTTTCATGATTTTTGAAACTTTTT-ACGATTTGGTATTTTTTTAAATTTTTTCGGAAGGAGTT
389 ATTTTTCATGATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * *
4900267 TTGGCCCCAAACTTTGTAGACGTGATCCTTTTATTTTTTTTGGGATGCACAAAAAAATTCAGCCA
453 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
*
4900332 AAAACTCGAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
518 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* *
4900397 TGGCTACTGGCAGCAAACCTGAAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
583 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * **
4900462 TGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACTAGCACCCA-CAAAACATCATGTGCGCA
648 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACATCATGTGCGCA
* * * * * * **
4900526 CACCCCCTCTGGCCCCCCCGATCGCCAGAAGCCCAATGTCGTCGGTCAAGTTCTCCGGTGATGCT
712 CACCCCC-CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCT
* * *
4900591 CCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
776 CCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * * *
4900656 CCGCAA-----------A-CC--TC--AGTCT-GG--T---CT--G-AT-CTTAGATTAGC
841 CTGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* *
4900691 AATGAACTTCC-TATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGC-CAAGCCGGTCAGAG
1 AATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA-CCGGCCAGAG
** * ** * *
4900754 GGGCGGGATGCGCAAGCTAGGGATTTATAGGGTCCACCTCTGCATGCTGCCGATCCTGCTACCGC
64 GGGCGGGATGCGCAAGCCGGGGA-TCAGCGGGTCC-CCTCTGCGTGCTGCCGATCCTGCTACTGC
* ** * * *
4900819 CACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTATGTATGCTTGAGCCAACCGATGAAA
127 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
4900884 CGA---GG-GGGCGGT---CGGGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGCCATGGATC
192 CGAGCGGGCGGGCGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* *
4900942 GATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-A-G-CATTTTTATGGC
257 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* *
4901004 TTGTAAATTCATACAATGGTCCTTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTTT
322 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * ** *
4901069 CTATTTTTCACGATTTTTGAAACTTTTTACAGCTT-GAAATTTTTTAAAATTTTTTCGGAAGAAG
387 CTATTTTTCATGATTTTTGAAACTTTTT-GAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* *
4901133 TTTTGGCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAGAATTCAGC
451 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * * *
4901198 TAAAAAGTCGAAGTGAAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
516 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * *
4901263 AATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTTGAGG
581 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
4901328 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGC
646 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
4901393 ACACGCCCCCCGGCCCCCCCGATCGTCGAAACCCTAATGCCGTCGGTCAAGTTCTCCGACGATGC
711 ACAC-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC
* * *
4901458 TCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGTGCCCAGCATGTGCT
775 TCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
4901523 ACCGCAACCCTCGGTCC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
840 GCTGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * ** * *
4901585 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCAG-GCGGGAGCTCTGCCGGCAAAAGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCTCAACCGGCCAGAGG
* * * * * ** *
4901649 GGCGAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCTGTCGATCCTGCTGTTGTA
65 GGCGGGATGCGCAAGCCGGGGATC-AGCGGGT-CCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* *
4901714 ACCCTCGATCTGGTCTGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
128 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
4901779 GAGCGGGCGGGC--T-GGCGGACACCACGCCGGCCAGAGAGACGGGATGCGCAAG-CGATGGATC
193 GAGCGGGCGGGCGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG-TGGATC
* * * * *
4901840 GATAGGCTGGTAGGTGGGTTTAGGTACATCTTCATAATTCTGCATGGCAATGCCATTTTTATGGC
257 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* *
4901905 TTGTAAATTCATACAATGGTCCCTGAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTT
322 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * *
4901970 CTATTTTTCATGATTTTTGAAACTTTTT-ACGATTTGGTATTTTTTTAAATTTTTTCGGAAGGAG
387 CTATTTTTCATGATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * *
4902034 TTTTGGCCCCAAACTTTGTAGACGTGATCCTTTTATTTTTTTTGGGATGCACAAAAAAATTCAGC
451 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* *
4902099 CAAAAACTCGAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
516 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
4902164 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
581 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * *
4902229 TTTGATGAGGGATAAGGGACCAATATAAGGGCCAAGTACCAGCACCCAAT-GCACATCATGTGTG
646 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC-ATCGCACATCATGTGCG
* * * * * *
4902293 CACAGCCCCTCGGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAAGTTCTCCGGCGATGC
710 CACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC
* * * * *
4902358 TCCGACGATGGAGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCAAACATGTGCT
775 TCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * * *
4902423 GCCGCAA-----------A-CC--TC--AGTCT--G---G---TCCG-AT-CTCAGATTGGG
840 GCTGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* *
4902459 AATGAACTTCC-TATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGC-CAAGCCGGTCAGAG
1 AATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA-CCGGCCAGAG
** * ** * *
4902522 GGGCGGGATGCGCAAGCTAGGGATTTATAGGGTCCACCTCTGCATGCTGCCGATCCTGCTACCGC
64 GGGCGGGATGCGCAAGCCGGGGA-TCAGCGGGTCC-CCTCTGCGTGCTGCCGATCCTGCTACTGC
* ** * * *
4902587 CACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTATGTATGCTTGAGCCAACCGATGAAA
127 AACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * *
4902652 CGA---GG-GGGCGGT---CGGGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGCCATGGATC
192 CGAGCGGGCGGGCGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* *
4902710 GATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-A-G-CATTTTTATGGC
257 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* * *
4902772 TTGTAAATTCATACAATGGTCCTTTAAGCCTTCACCTGAAGTTTCACGGCAAGACGACTCGTTTT
322 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * ** *
4902837 CTATTTTTCACGATTTTTGAAACTTTTTACAGCTT-GAAATTTTTTAAAATTTTTTCGGAAGAAG
387 CTATTTTTCATGATTTTTGAAACTTTTT-GAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* *
4902901 TTTTGGCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAGAATTCAGC
451 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * * *
4902966 TAAAAAGTCGAAGTGAAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTT
516 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * *
4903031 AATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTTGAGG
581 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
*
4903096 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGGGC
646 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
4903161 ACACGCCCCCCGGCCCCCCCGATCGTCGAAACCCTAATGCCGTCGGTCAAGTTCTCCGACGATGC
711 ACAC-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGC
* * *
4903226 TCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGTGCCCAGCATGTGCT
775 TCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* *
4903291 ACCGCAACCCTCGGTCC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
840 GCTGCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * ** * *
4903353 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCAG-GCGGGAGCTCTGCCGGCAAAAGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCTCAACCGGCCAGAGG
* * * * * ** *
4903417 GGCGGGATGCGCAAGCCGGGGATCGACCGGGTAACCCTCTACATGCTGTCGATCCTGCTGTTGTA
65 GGCGGGATGCGCAAGCCGGGGATC-AGCGGGT-CCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* *
4903482 ACCCTCGATCTGGTCTGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
128 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* *
4903547 GAGCGGGCGGGCAGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
193 GAGCGGGCGGGC-GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* *
4903612 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAGTGCCATTTTTATGGC
257 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* * *
4903677 TTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACAACTCGTTTT
322 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
** * * *
4903742 CTATTTTTCACT-ATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGAC
387 CTATTTTTCA-TGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * *
4903806 TTTTGGCCCCAAACGTGGTAGACGTGATCCTTGTATTTTTGTCGGCATGCACAAAAAAAAATT-A
451 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC--AAAAAAATTCA
* * ** * *
4903870 GCTAAAAACTTGAAGTGTACGAGATTTTACGACCATTTGAAAAAAATGTCCCCATTTCAGACAAT
514 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
4903935 TTAATGGCTACTAGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTCA
579 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGGTGTGAGTTCTCG
* * *
4904000 AGGTTTGATGAGGGATAAGGGGCAAATATAAGGGCCAAGTTCCAGCACCCATCGCACATCATGTG
643 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * **
4904065 CGTACACCCCCCCGGTCCCCTCGATCG-CTGGAACCCCATTGCCGTCGGTCAGGTTCTCCGGTGA
708 CGCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGA
* * ** *
4904129 TGCTCCGACGATGGTGCCCTGGCAAAGAAAAATGCATCACCAGCACATGCCCGAGCCTAGCATGT
772 TGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * *
4904194 GCTG-TCGCAACCCTTC-GTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCTTTGACTG
837 GCTGCT-GCAACCC-TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
4904257 GG
900 GG
* * * *
4904259 AATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGTGTGCAGGCGCTCAGCCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * * ** *
4904324 GTGGGATGTGCAAGCCGGGGATCGGCCAGATCCCTCTCTGCGTGCTGCTAATCCTGCTACTGTAA
66 GCGGGATGCGCAAGCCGGGGATCAG-CGGGTCCC-CTCTGCGTGCTGCCGATCCTGCTACTGCAA
* * *
4904389 CCTTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAACA
129 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-
* * * *
4904454 AGAGGGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGA
193 -GA--GCGGGCGGGC-GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
** * * * *
4904519 ATCGATAAAGTGGTAAGTGGGTTTAGGCACGTCTTCATATTTCTGTGTGCCGAA-GCCATTTTGA
254 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCC-AATGCCATTTTTA
* * **
4904583 TGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTGCATTTCAAGACGACTCG
318 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* *
4904648 TTTTCTATTTTTCATAATTTTTGAAACTTTTT-ACGGTTCAGGATTTTTTAAAATTTTTT-GGAA
383 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTTTCGGAA
* * * *
4904711 AGAGCTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTGTTGGCATGCATAAAAAAAT
447 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTTTTGGCATGCACAAAAAAAT
* * * *
4904776 TCAGCTAAAAACTCGAAGTGTATAAGATTTTGCGACCTTTTGAAAAAAGTGTCCCCATTTCAAAC
511 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * *
4904841 ACTTCAATGGCTATTGGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
576 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * *
4904906 TGAGGTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCACG
641 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
4904971 TGCGCACACCCCCCCGGCCCCCCCAATCGTCGAAACCCCAATGTCGTCGATCAAG-T-T----C-
706 TGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACG
* * ** * *
4905029 -T-CT--G--G-TGATGCTCTAGCGAAGAAAAATGCGGCACCAGCAGATGCCCGACCCCAGCATG
771 ATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * *
4905087 TGCTG-TCGCAACCCCCGGTCC-AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTACAAT
836 TGCTGCT-GCAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
4905150 GGG
899 GGG
* * * * * *
4905153 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCACTCAGCCTGCTAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * * *
4905218 GCTGGATGCGCAAGCCGGGGATCCGCTGGGTCCCCCTTTGTGTGCTACCGATCTTGCTACTGCAA
66 GCGGGATGCGCAAGCCGGGGATCAGC-GGGT-CCCCTCTGCGTGCTGCCGATCCTGCTACTGCAA
* * ** ** * *
4905283 CCTTCGATCCAGTCCAATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACA
129 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
* * **
4905348 AGCGGGCGGGCGGGTGGGCGGGCACTACGTC-GCCAGAGAAACATGATGCGCAAGCCGTGGATCG
194 AGCGGGCGGGC-GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
* * *
4905412 ATAGGGTGGTAGGTGGGTTTATGCGCATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCT
258 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCT
* *
4905477 TGTAAATTCATACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAAACGACTCGTTTTC
323 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* ** * * *
4905542 TATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATCTTTTCGGAAGGGGTT
388 TATTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * **
4905607 TTGGCCCCAAACCTGGTAGACATGATCCTTGTATTTTTGTTGGTGTGCACAAAAAAATTCAGCTA
453 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
* * *
4905672 AAAAGTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAGACACTTTAA
518 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
** *
4905737 TGGCTACTGGCA-CAAACCTGTAAAATCTCAAATGCTCTTTAAATGGGTGTGATTTCTCGAGGTT
583 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
* * * *
4905801 TCATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCTTGTGCGCAC
648 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
4905866 A-CCCCCCGGCCCCCTCTGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC
713 ACCCCCCCGGCCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTC
* * * *
4905930 CGACGATGGTGCGCCGGCGAAGAAAAATGCAGG-ACCAGCACATGCTCAAGCCCAGCATGTGCTA
777 CGACGATGGTGCCCCGGCGAAGAAAAATGC-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * * *
4905994 CTGCAACCATCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGG
841 CTGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* ** ** * *
4906055 AATGAACTCTGTATGCCTAAGTCAACAAATAAAATGAGCGTGCGGGCGCCCAACCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * *
4906120 GCGGGATGCGGAAGCCGGGGATC-GACTGGGTCCCCCTCTGCATGCTGCCGATCCTGCTACCGCA
66 GCGGGATGCGCAAGCCGGGGATCAG-C-GGGT-CCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* ** * ** *
4906184 ACCCTCGGCCCAGTCCGATCTTAGACTGGGAATGAACTATGTATGCCTAAGCCAACCGACGAAAA
128 ACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
* * * * * *
4906249 GAGCGGGCGGACGGGCGGGCGGGCGCTACGTCGGCCAGAGAGATGGGATGCGTAAGCCGTGGATC
193 GAGCGGGCGGGC-GGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* *
4906314 GATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
257 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* *
4906379 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGTAAGACGACTCGTTTT
322 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * *
4906444 CAATTTTTCATGATTTTTGAAGCTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT-GAAAGGAGT
387 CTATTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * * *
4906508 TCTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAATTCAGCT
452 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT
* *
4906573 AAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTA
517 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * *
4906638 AGGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGT
582 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
* * *
4906703 GTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATTGCACATCATGTGCGCA
647 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * *** *
4906768 CACCCCCCCGACCCCCTCGATTACCGGAACCCCAATGCCGTTGGTCAGGTTCTCCGACGATGCTC
712 CACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTC
* ** * * *
4906833 CGGCGATGGTGCCCCGTTGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCTAGCATGTGCTG-
777 CGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * * * *
4906897 TCGCAACCCTCGGTCTGGTTCAATTTTAGACTGGGAATGAACTCCGTAAGCTTAGACTGGG
842 T-GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * ** * *
4906958 AATGATCTCCGTAGGCTTAAGTCAACCCATGAAACGAGTATGCAGGCGCTCAACCGGCCAAAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * ** * * * * * * *
4907023 GAGGGATGCGCAAGCTGGCAATCGGCTGGGTTCCTCTCTGTGTGATGCCAATCTTGCTGCTGCAA
66 GCGGGATGCGCAAGCCGGGGATCAGC-GGG-TCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAA
* * *
4907088 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACAAAACG
129 CCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACG
*
4907153 AACGGGC
194 AGCGGGC
4907160 AAGCGGGCGT
Statistics
Matches: 8633, Mismatches: 1082, Indels: 639
0.83 0.10 0.06
Matches are distributed among these distances:
864 12 0.00
865 1 0.00
866 17 0.00
867 376 0.04
868 604 0.07
869 13 0.00
870 89 0.01
871 91 0.01
872 10 0.00
873 115 0.01
874 270 0.03
875 185 0.02
876 68 0.01
877 16 0.00
878 9 0.00
879 6 0.00
880 59 0.01
881 113 0.01
882 60 0.01
883 37 0.00
884 73 0.01
885 37 0.00
886 65 0.01
887 99 0.01
888 163 0.02
889 367 0.04
890 97 0.01
891 2 0.00
892 20 0.00
893 22 0.00
894 596 0.07
895 23 0.00
896 7 0.00
897 85 0.01
898 567 0.07
899 69 0.01
900 156 0.02
901 455 0.05
902 771 0.09
903 766 0.09
904 103 0.01
905 287 0.03
906 470 0.05
907 134 0.02
908 147 0.02
909 145 0.02
910 251 0.03
911 40 0.00
912 53 0.01
913 56 0.01
914 23 0.00
915 79 0.01
916 79 0.01
917 50 0.01
918 28 0.00
919 10 0.00
920 5 0.00
922 6 0.00
923 14 0.00
924 3 0.00
925 9 0.00
926 7 0.00
927 4 0.00
928 2 0.00
929 2 0.00
930 4 0.00
931 2 0.00
932 4 0.00
934 1 0.00
935 5 0.00
936 19 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (901 bp):
AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
GCGGGATGCGCAAGCCGGGGATCAGCGGGTCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAACC
CTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
CGGGCGGGCGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATA
GGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGT
AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTAT
TTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTG
GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAA
ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGAC
GATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTGCA
ACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
Found at i:4901577 original size:26 final size:26
Alignment explanation
Indices: 4901548--4901600 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4901538 CCAGTCCGAT
4901548 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4901574 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4901600 C
1 C
4901601 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4903345 original size:26 final size:26
Alignment explanation
Indices: 4903316--4903368 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4903306 CCAGTCCGAT
4903316 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4903342 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4903368 C
1 C
4903369 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4906047 original size:26 final size:26
Alignment explanation
Indices: 4906018--4906070 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4906008 CCGGTTCGAT
4906018 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
4906044 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4906070 C
1 C
4906071 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4906407 original size:903 final size:903
Alignment explanation
Indices: 4896222--4907174 Score: 12664
Period size: 903 Copynumber: 12.2 Consensus size: 903
4896212 TTGACTGGAA
* * * *
4896222 AATGAAACTCCGTATGCCTTAAGTTAACCCACGAAACGAGCGT--GAGCGC-CCAGCGGCCAATG
1 AATG-AACTCCGTATGCC-TAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCC-A-G
* * * * * **
4896284 AGGGGAGTGATGCGCAAGCCGGGGATCGCCAGCGTCCCCCTCTGCGTGCTATCGAATCCTGCTAC
62 AGGGGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCG-ATCCTGCTAC
* * * * * *
4896349 TGCAACCATCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATACCTAAGCCAAGTCAAT
126 TGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CCGAC
** * * * *
4896414 G-AACTAGCGGGCGG-GAGACGGGCAGTGCACTCACG-CGG-CAGAGAAGACGGAATGCACAAGC
190 GAAAAGAGCGGGCGGCG-GGCGGGC-GGGCACT-ACGCCGGCCAGAG-AGACGGGATGCGCAAGC
* *
4896475 TGTGGATCGATAGGGTGGTAGGTTGAGTTTAGGCAC-TCTTCATATTTCTGC-TGCCAATTGCCA
251 CGTGGATCGATAGGGTGGTAGG-TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA-TGCCA
** * *
4896538 TTTTTATATCTTGTGAATTCATACAATGGTCCCTTAAACCCTTCACGTGAAGTTTCATGGCAAGA
314 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * * *
4896603 TGAACTCATTTT-TATTTTTCAACGGTTTTTCAAAAAC-TTTCACGATTCAGGATTTTTTAAAA-
378 CG-ACTCGTTTTCTATTTTTC-ACGATTTTT--GAAACTTTTTACGGTTCGGGATTTTTTAAAAT
** * * * *
4896665 TTTCCCAAGAAAGAGTTTTGGCCCCAAACTTGGTAGACATGATTCCTGTGTATTTTGTTTGGCAT
439 TTTTTC-GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA-TCCT-TGTATTTTTTTTGGCAT
*
4896730 GCACAAAAAAATTCAGCTAAAAAATGCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATA-TG
501 GCACAAAAAAATTCAGCTAAAAACT-CGAAGTGTACAAGATTTTGTGACCATTTGAAAAA-AGTG
*
4896794 TCCCCATTTTCAGACACTTTAAT-GCTACTGGCAGCCAACC-GTAAAATCTCAAATGCTCTTT-A
564 TCCCCA-TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
4896856 AGGTGT-TGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTA-CAGCAC
628 AGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * ** * * * * **
4896918 CCATCGCACATCATGTGCGCACA--CCCTCGACCCACCCGATTTTCAGAACCGCGATTCCACCGG
693 CCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGG
* * * *
4896981 TCAGGTTC-CCTGACGATGCTCCGACGATGGTGCTCC-GTGAAG-AAAATACGGCACCAGCACAT
758 TCAGGTTCTCC-GGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACAT
* * * * * * * * * *
4897043 GCTCGAGCCCAGCATGTACTGCAGTAACCATTGGTCTTGATCTGATCCTAGACTGGGAATGAACT
822 GCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTC-CGGTCCGATCTTAGACTGGGAATGAACT
* *
4897108 CCGTAAGCTTAGACTTGG
886 CCGTATGCTTAGACTGGG
* *
4897126 AAT-AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCTGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGA-GG
* * * * * ***
4897189 GGCGCGATGCGTAAGCTGGGGATCGACTGGGTCCCCCTATGCGTGCTGCCGATCCTGGTACCAAA
65 GGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* * * *
4897254 ACCCTCAGTCCGGTCTGATCTTAGACTAGG-ATGAACTTCGTATGCCTAAGCCAACCGATGAAAC
130 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-
* * *
4897318 GAGCAGGCGGGCGGGCGGGCCGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCGGTG
194 -AG-A-GCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * *
4897383 G-TCGATAGGGTGGTAGGGTTGGTTTAGGCACATCTTCATTATTTCTATG-TTGCCGATGCCATT
255 GATCGATAGGGTGGTA-GGTGGGTTTAGGCACATCTTCA-TATTTC--TGCATGCCAATGCCA-T
* * *
4897446 TTTTATGG--TGTAAATTCGTACCATGGTCCCTTAAGCGCCTCACGTGAAGTATTTCATGGTCAA
315 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC-CTTCACGTGAAG--TTTCATGG-CAA
* * ***
4897509 G-CGACTCATTGTCTATTTTTCACGAGTTTCAAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
376 GACGACTCGTTTTCTATTTTTCACGA-TTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-T
*
4897573 TTTTTC-GATAGGGGTTTTTGGCCCCAAGACTTGGGTAGACGTTGGATCCCTTGTATTTTTTTTG
439 TTTTTCGGA-AGGAG-TTTTGGCCCCAA-ACTT-GGTAGACG-T-GAT-CCTTGTATTTTTTTTG
* *** * *
4897637 GCATGTATTTAAAGATTTAGCTAAAAAACTCGAAGTGTTACAAGATTTTGTGACCATTTGAAAAA
497 GCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTG-TACAAGATTTTGTGACCATTTGAAAAA
* * *
4897702 AGTTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCCAAACTTTTAAAATCTCCAAATTGC
560 AG-TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-CAAACCTGTAAAATCT-CAAA-TGC
* * * *
4897767 GCTTT-AAGGGGTGTGAGTTCTTGAGGGTTTGATGAGGGGTTACGGGGGCCTAATATAAGGTCCA
621 TCTTTAAAGGGGTGTGAGTTCTCGA-GGTTTGATGA-GGGATA-GGGGGCC-AATATAAGGGCCA
* * *
4897831 AGTTACCAGCACCCCAT-TCACAACTCATGGTTGCCGCTACCATGCCCGCCGGCACCCCCCGATC
682 AG-TACCAGCA-CCCATCGCAC-A-TCAT-G-TG-CGC-A-CA-CCCCCCCGGC-CCCCCCGATC
* * *
4897895 GTAGGAGCCCCAATGCCGTC--T--GG-T-T----C-A-------A-G-T-TTGCCCCGGCGAAG
736 GTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAG
* * * *
4897939 AAAAATACGGCACCAGCACATGCCCGACGACCGGCATGTGCTG-TCGCAACCCTC-GTCTGGTCC
801 AAAAATGCGGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGCT-GCAACCCTCGGTCCGGTCC
4898002 GATCTTAGACTGGGAATGAACTTCCGTATGC--AGACTGGG
864 GATCTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTGGG
*
4898041 AATGAACTTCGTATGCCTAAGTCAACCCACGAAA-GAGCGTGCGGGCGCTCAACCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * ***
4898105 GCGGGATGCGCAAGCCAGGGATCGGC-CGGTCCCCCTCTGTGTG-TTTAGATCCTGCTA-TCGCA
66 GCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACT-GCA
** * *
4898167 ACCCTCGGTCTAGTTTGATCTTAGACTAGGAATGGAACTCCGTATGCCTAAGCCAACCGAC-AAA
130 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAAT-GAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
4898231 ATAGC---AGGCGGGC--GCGGACACTACGCCAGCTCAGAGAGACGGGATGCGCAAGCCGTGGAT
194 AGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGC-CAGAGAGACGGGATGCGCAAGCCGTGGAT
* * * *
4898291 CGATAGGGTGGTAGGTGGGTTTAGGCACAT-TTAATATTTTTGCGTGACAATGGCCATTTTTAAT
258 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT-GCCATTTTT-AT
* *
4898355 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTCATAGCAAGACAACTCGT
321 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
4898419 TTTCTATTTTT-ATGATTTTTGAAACTTTTTGCGG-TCGAGATTTTTTAAAATTTTTT-GGATGG
386 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * *
4898481 GGTTGTGGCCCCAAACTTGGTAGAC-TGATCCTTGTATTTTTCTTGGCA-GCACAAAAAACA-TC
451 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA-ATTC
* * *
4898543 AGGTAAAAAATCGAAGTGTACAAGATTTTGTGACCA-TTGAAAAAAGTGTCCCCATTTCAGACAA
515 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
4898607 TTTAATGGCTACTGGCAGCAAACCCGTAAAATCTAAAATGCTCTTT-AAGGGGTGTGAGTTTTCG
580 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCG
* * * *
4898671 AGGCTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCCGTACCCATCGCACATCTTGTG
645 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* *
4898736 CGTACA-CCCCCCGGCCCCCCCGATCGTCGG-A-CCCAATGCCGTCGATCAGG---T-------T
710 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* * * *
4898788 -CTCCGACGATGGTG-CCCGGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCGTAT
775 GCTCCGACGATGGTGCCCCGG-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * * *
4898851 GCTGCCGCAACCCTTGGTCCTGTCCGATCTTAGACTGGGAATAAACTCCGTATGCATAGACT-GG
839 GCTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * *
4898915 AATGAACTCTGTATGCCTAAGTCAACCCAAGAAACTAGCGTGCGGGCGCTCAGCTGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * * ***
4898980 GTGGGATGCGTAAGCCGGGGATCG-GTCGGGT-CCCTTTTGCGTGCTGCCGATCCTGCTACCATA
66 GCGGGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* * *
4899043 ACCCTCAGTCTGAT-TGGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
130 ACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * * ** ** **
4899107 CGAGCGAGTG-GGCAGGTGGGCGGGCACTACGTCGGCCAGAGAGACATGATGCGTTAGTGGTGGA
194 AGAGCG-G-GCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* * * *** *
4899171 TCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTGATAATTCTATGTGGCAATGCCATTTTTATG
257 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
*
4899236 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTT
322 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * *
4899301 TTTTATTTTTCATGATTTTTGAAACTTTTTGA-GGTTCGGGATTTTTTAAAATTTTCTCGGAAGG
387 TTCTATTTTTCACGATTTTTGAAACTTTTT-ACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * *
4899365 CGTTTTGGCCCCAAACTTGGTAGTCATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCA
451 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCA
* * **
4899430 ACTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAACCTGTCCCCATTTCAGACACT
516 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * *
4899495 TTAATGGCTACTAGCAGCAAACCCGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTTCTCGA
581 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGA
*
4899560 GGTTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTG
646 GG-TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* * * * ** *
4899625 CGCACACCCCTCCGGCCCCCCCGATCGCCGGAACCCTAATGCTGTTAGTCAGGTTCTCCGACGAT
710 CGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
** * *
4899690 GCTCCGGTGATGGTGCCCCGGTGAAG-AAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG
775 GCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * ** * ** *
4899754 CTGCTGTAACCATCGGTTTGATCCGATCTTAGACTCAGAATGAACTCTGTATGCTTAGACTGGG
840 CTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * *
4899818 AATAAACTCTGTATTCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAACCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * ** *
4899883 GTGGGATGCACAAGCCGGGGATC-AGC-GGGT-CCCCTCTGCGTGC-GATTGATCCTACTACTGC
66 GCGGGATGCGCAAGCCGGGGATCGA-CTGGGTCCCCCTCTGCGTGCTG-CCGATCCTGCTACTGC
* * *
4899944 AAGCCTCAGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
129 AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA
* * * *
4900009 CGAGC--G-GGCGGGCTGGCGGACACCACGCCGGCCAGAGAGACGGGATGCGCAAG-CGATGGAT
194 AGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG-TGGAT
* * * *
4900070 CGATAGGCTGGTAGGTGGGTTTAGGTACATCTTCATAATTCTGCATGGCAATGCCATTTTTATGG
258 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* *
4900135 CTTGTAAATTCATACAATGGTCCCTGAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTT
323 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* * * * *
4900200 TCTATTTTTCATGATTTTTGAAACTTTTTACGATTTGGTATTTTTTTAAATTTTTTCGGAAGGAG
388 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * *
4900265 TTTTGGCCCCAAACTTTGTAGACGTGATCCTTTTATTTTTTTTGGGATGCACAAAAAAATTCAGC
453 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* *
4900330 CAAAAACTCGAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
518 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * *
4900395 AATGGCTACTGGCAGCAAACCTGAAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGG
583 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGG
* * **
4900460 TTTGATGAGGGATAGGGGGCAAATATAAGGGCCAAGTACTAGCACCCA-CAAAACATCATGTGCG
648 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACATCATGTGCG
* * * * * * *
4900524 CACACCCCCTCTGGCCCCCCCGATCGCCAGAAGCCCAATGTCGTCGGTCAAGTTCTCCGGTGATG
712 CACACCCCC-CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATG
* * *
4900589 CTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGC
776 CTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
4900654 TGCCGCAAACCTCAGT-C--T--G------GTCT--G-AT---CT---TA-GATTAG-C----
841 TGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* *
4900691 AATGAACTTCC-TATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGC-CAAGCCGGTCAGAG
1 AATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA-CCGGCCAGAG
** ** * * *
4900754 GGGCGGGATGCGCAAGCTAGGGATTTA-TAGGGTCCACCTCTGCATGCTGCCGATCCTGCTACCG
64 GGGCGGGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTG
* * ** * * *
4900818 CCACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTATGTATGCTTGAGCCAACCGATG--
128 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * *
4900881 AA-A-C--GAGG-GGGCGGTCGGGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGCCATGGAT
193 AAGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
*
4900941 CGATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-A-G-CATTTTTATGG
258 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* *
4901003 CTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTT
323 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** *
4901068 TCTATTTTTCACGATTTTTGAAACTTTTTACAGCTT-GAAATTTTTTAAAATTTTTTCGGAAGAA
388 TCTATTTTTCACGATTTTTGAAACTTTTTAC-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* *
4901132 GTTTTGGCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAGAATTCAG
452 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
* * * *
4901197 CTAAAAAGTCGAAGTGAAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTT
517 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * *
4901262 TAATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTT-AAGGGGTTGTGAGTTCTTGA
582 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGG-TGTGAGTTCTCGA
*
4901326 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGG
646 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
4901391 GCACACGCCCCCCGGCCCCCCCGATCGTCGAAACCCTAATGCCGTCGGTCAAGTTCTCCGACGAT
711 GCACAC-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* * *
4901456 GCTCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGTGCCCAGCATGTG
775 GCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
4901521 CTACCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
840 CTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * ** * *
4901585 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCAG-GCGGGAGCTCTGCCGGCAAAAGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCTCAACCGGCCAGAGG
* * * * * ** *
4901649 GGCGAGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACATGCTGTCGATCCTGCTGTTGTA
65 GGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* * * *
4901714 ACCCTCGATCTGGTCTGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
130 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAA
* * *
4901779 GAGC--G-GGCGGGCTGGCGGACACCACGCCGGCCAGAGAGACGGGATGCGCAAG-CGATGGATC
195 GAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG-TGGATC
* * * *
4901840 GATAGGCTGGTAGGTGGGTTTAGGTACATCTTCATAATTCTGCATGGCAATGCCATTTTTATGGC
259 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* *
4901905 TTGTAAATTCATACAATGGTCCCTGAAGCCTTCACGTGATGTTTCATGGCAAGACGACTCGTTTT
324 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * *
4901970 CTATTTTTCATGATTTTTGAAACTTTTTACGATTTGGTATTTTTTTAAATTTTTTCGGAAGGAGT
389 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * * *
4902035 TTTGGCCCCAAACTTTGTAGACGTGATCCTTTTATTTTTTTTGGGATGCACAAAAAAATTCAGCC
454 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT
*
4902100 AAAAACTCGAAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
519 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* *
4902165 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGT
584 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGT
* * *
4902230 TTGATGAGGGATAAGGGACCAATATAAGGGCCAAGTACCAGCACCCAAT-GCACATCATGTGTGC
649 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCC-ATCGCACATCATGTGCGC
* * * * *
4902294 ACAGCCCCTCGGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAAGTTCTCCGGCGATGCT
713 ACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCT
* * * * *
4902359 CCGACGATGGAGCCCTGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCAAACATGTGCTG
778 CCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
* * * *
4902424 CCGCAAACCTCAGTCTGGTCCGATC-T---C---------A----G-A----T----TGGG
843 CTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* *
4902459 AATGAACTTCC-TATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGC-CAAGCCGGTCAGAG
1 AATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAA-CCGGCCAGAG
** ** * * *
4902522 GGGCGGGATGCGCAAGCTAGGGATTTA-TAGGGTCCACCTCTGCATGCTGCCGATCCTGCTACCG
64 GGGCGGGATGCGCAAGCCGGGGATCGACT-GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTG
* * ** * * *
4902586 CCACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTATGTATGCTTGAGCCAACCGATG--
128 CAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* * * * *
4902649 AA-A-C--GAGG-GGGCGGTCGGGCACTACGCCAGCCAGAGAGATGGGATGCGCAAGCCATGGAT
193 AAGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
*
4902709 CGATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-A-G-CATTTTTATGG
258 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* * *
4902771 CTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACCTGAAGTTTCACGGCAAGACGACTCGTTT
323 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* ** *
4902836 TCTATTTTTCACGATTTTTGAAACTTTTTACAGCTT-GAAATTTTTTAAAATTTTTTCGGAAGAA
388 TCTATTTTTCACGATTTTTGAAACTTTTTAC-GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
* *
4902900 GTTTTGGCCCCAAAGTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAGAATTCAG
452 GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAG
* * * *
4902965 CTAAAAAGTCGAAGTGAAAAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTT
517 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * *
4903030 TAATGGCTACTGGCAACAAACCTATAAAATCTCAAATGCTCTTT-AAGGGGTTGTGAGTTCTTGA
582 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGG-TGTGAGTTCTCGA
*
4903094 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGG
646 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
4903159 GCACACGCCCCCCGGCCCCCCCGATCGTCGAAACCCTAATGCCGTCGGTCAAGTTCTCCGACGAT
711 GCACAC-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* * *
4903224 GCTCTGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGTGCCCAGCATGTG
775 GCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
4903289 CTACCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
840 CTGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * ** * *
4903353 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCAG-GCGGGAGCTCTGCCGGCAAAAGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCTCAACCGGCCAGAGG
* ** * * * ** *
4903417 GGCGGGATGCGCAAGCCGGGGATCGACCGGGTAACCCTCTACATGCTGTCGATCCTGCTGTTGTA
65 GGCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* * * *
4903482 ACCCTCGATCTGGTCTGATCTTAGGCTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
130 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAA
* *
4903547 GAGCGGGCGGGCAGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
195 GAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
** *
4903612 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAGTGCCATTTTTATGGC
259 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
* * *
4903677 TTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACAACTCGTTTT
324 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* ** * * *
4903742 CTATTTTTCACTATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGACT
389 CTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * *
4903807 TTTGGCCCCAAACGTGGTAGACGTGATCCTTGTATTTTTGTCGGCATGCACAAAAAAAAATT-AG
454 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAC--AAAAAAATTCAG
* * ** * *
4903871 CTAAAAACTTGAAGTGTACGAGATTTTACGACCATTTGAAAAAAATGTCCCCATTTCAGACAATT
517 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
* * * *
4903936 TAATGGCTACTAGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGTGTGAGTTCTCAA
582 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-AGGGGTGTGAGTTCTCGA
* * *
4904001 GGTTTGATGAGGGATAAGGGGCAAATATAAGGGCCAAGTTCCAGCACCCATCGCACATCATGTGC
646 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * *
4904066 GTACACCCCCCCGGTCCCCTCGATCG-CTGGAACCCCATTGCCGTCGGTCAGGTTCTCCGGTGAT
711 GCACACCCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGAT
* * ** *
4904130 GCTCCGACGATGGTGCCCTGGCAAAGAAAAATGCATCACCAGCACATGCCCGAGCCTAGCATGTG
775 GCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * *
4904195 CTG-TCGCAACCCTTC-GTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCTTTGACTGG
840 CTGCT-GCAACCC-TCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
4904258 G
903 G
* * * *
4904259 AATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGTGTGCAGGCGCTCAGCCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * ** * * ** *
4904324 GTGGGATGTGCAAGCCGGGGATCGGCCAGATCCCTCTCTGCGTGCTGCTAATCCTGCTACTGTAA
66 GCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAA
* * * *
4904389 CCTTCGGTCTGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCAACGAAACA
131 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA-A
* * *
4904454 AGAGGGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCATGA
194 AGA--GCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
** * * ** *
4904519 ATCGATAAAGTGGTAAGTGGGTTTAGGCACGTCTTCATATTTCTGTGTGCCGAA-GCCATTTTGA
256 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-AATGCCATTTTTA
* * **
4904583 TGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTGCATTTCAAGACGACTCG
320 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
** * *
4904648 TTTTCTATTTTTCATAATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTT-GGAAA
385 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * *
4904712 GAGCTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATATTTTGTTGGCATGCATAAAAAAATT
450 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTTTTGGCATGCACAAAAAAATT
* * * *
4904777 CAGCTAAAAACTCGAAGTGTATAAGATTTTGCGACCTTTTGAAAAAAGTGTCCCCATTTCAAACA
514 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * * * *
4904842 CTTCAATGGCTATTGGCAGCAAAGCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTT
579 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTC
* * *
4904907 GAGGTTTGATGACGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCTCACATCACGT
644 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
* * * * * * *
4904972 GCGCACACCCCCCCGGCCCCCCCAATCGTCGAAACCCCAATGTCGTCGATCAAGTTCTCTGGTGA
709 GCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGA
* * *
4905037 TGCT----C-----T-----AGCGAAGAAAAATGCGGCACCAGCAGATGCCCGACCCCAGCATGT
774 TGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * *
4905088 GCTG-TCGCAACCCCCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTACAATGG
839 GCTGCT-GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
4905152 G
903 G
* * * * * *
4905153 AATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCACTCAGCCTGCTAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * * * *
4905218 GCTGGATGCGCAAGCCGGGGATCCG-CTGGGTCCCCCTTTGTGTGCTACCGATCTTGCTACTGCA
66 GCGGGATGCGCAAGCCGGGGAT-CGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCA
* * * ** *
4905282 ACCTTCGATCCAGTCCAATCTTATACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC
130 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-
* * * **
4905347 A-AGCGGGCGGGCGGGTGGGCGGGCACTACGTC-GCCAGAGAAACATGATGCGCAAGCCGTGGAT
194 AGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * **
4905410 CGATAGGGTGGTAGGTGGGTTTATGCGCATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGG
258 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
* *
4905475 CTTGTAAATTCATACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAAACGACTCGTTT
323 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
** * * *
4905540 TCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATCTTTTCGGAAGGGG
388 TCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * * **
4905605 TTTTGGCCCCAAACCTGGTAGACATGATCCTTGTATTTTTGTTGGTGTGCACAAAAAAATTCAGC
453 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGC
* * *
4905670 TAAAAAGTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCATTTCAGACACTTT
518 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* *
4905735 AATGGCTACTGGCA-CAAACCTGTAAAATCTCAAATGCTCTTTAAATGGGTGTGATTTCTCGAGG
583 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGG
* * * *
4905799 TTTCATGAGGTATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCTTGTGCGC
648 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGC
* * *
4905864 ACA-CCCCCCGGCCCCCTCTGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGC
713 ACACCCCCCCGGCCCCC-CCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGC
* * *
4905928 TCCGACGATGGTGCGCCGGCGAAGAAAAATGCAGG-ACCAGCACATGCTCAAGCCCAGCATGTGC
777 TCCGACGATGGTGCCCCGGCGAAGAAAAATGC-GGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * * *
4905992 TACTGCAACCATCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGG
841 TGCTGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* ** ** * *
4906055 AATGAACTCTGTATGCCTAAGTCAACAAATAAAATGAGCGTGCGGGCGCCCAACCGGCCAGAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * *
4906120 GCGGGATGCGGAAGCCGGGGATCGACTGGGTCCCCCTCTGCATGCTGCCGATCCTGCTACCGCAA
66 GCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAA
* * * **
4906185 CCCTCGGCCCAGTCCGATCTTAGACTGGGAATGAACTATGTATGCCTAAGCCAACCGACGAAAAG
131 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAG
* * * *
4906250 AGCGGGCGGACGGGCGGGCGGGCGCTACGTCGGCCAGAGAGATGGGATGCGTAAGCCGTGGATCG
196 AGCGGGCGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCG
*
4906315 ATAGGGTGATAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
260 ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCT
* *
4906380 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGTAAGACGACTCGTTTTC
325 TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
* * * * * *
4906445 AATTTTTCATGATTTTTGAAGCTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT-GAAAGGAGTT
390 TATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * * *
4906509 CTGGCCCTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAAATTCAGCTA
455 TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTA
* *
4906574 AAAACTCGAAGTGTACAAGATTTTGTCACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTAA
520 AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * *
4906639 GGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCAAGGTG
585 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTT
* *
4906704 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCATCACCCATTGCACATCATGTGCGCAC
650 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * *** * *
4906769 ACCCCCCCGACCCCCTCGATTACCGGAACCCCAATGCCGTTGGTCAGGTTCTCCGACGATGCTCC
715 ACCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCC
* ** * * *
4906834 GGCGATGGTGCCCCGTTGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCTAGCATGTGCTG-T
780 GACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCT
* * * * *
4906898 CGCAACCCTCGGTCTGGTTCAATTTTAGACTGGGAATGAACTCCGTAAGCTTAGACTGGG
845 -GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
* * * * ** * *
4906958 AATGATCTCCGTAGGCTTAAGTCAACCCATGAAACGAGTATGCAGGCGCTCAACCGGCCAAAGGG
1 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
* * ** * * * * * * * *
4907023 GAGGGATGCGCAAGCTGGCAATCGGCTGGGTTCCTCTCTGTGTGATGCCAATCTTGCTGCTGCAA
66 GCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAA
*
4907088 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGAC-AAAAC
131 CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAA-
* * *
4907152 GAACGGGCAAGCGGGCGTGCGGG
195 GAGCGGGC-GGCGGGCGGGCGGG
4907175 ATTTTTTAAA
Statistics
Matches: 8633, Mismatches: 1105, Indels: 623
0.83 0.11 0.06
Matches are distributed among these distances:
864 12 0.00
866 22 0.00
867 377 0.04
868 621 0.07
869 14 0.00
870 91 0.01
871 97 0.01
872 12 0.00
873 108 0.01
874 258 0.03
875 174 0.02
876 58 0.01
877 15 0.00
878 13 0.00
879 10 0.00
880 59 0.01
881 115 0.01
882 58 0.01
883 34 0.00
884 61 0.01
885 38 0.00
886 64 0.01
887 95 0.01
888 179 0.02
889 371 0.04
890 95 0.01
891 2 0.00
892 17 0.00
893 17 0.00
894 566 0.07
895 18 0.00
896 9 0.00
897 83 0.01
898 573 0.07
899 70 0.01
900 170 0.02
901 457 0.05
902 770 0.09
903 772 0.09
904 99 0.01
905 295 0.03
906 477 0.06
907 127 0.01
908 166 0.02
909 144 0.02
910 245 0.03
911 40 0.00
912 54 0.01
913 56 0.01
914 23 0.00
915 80 0.01
916 79 0.01
917 50 0.01
918 29 0.00
919 10 0.00
920 5 0.00
922 6 0.00
923 14 0.00
924 2 0.00
925 9 0.00
926 7 0.00
927 4 0.00
928 1 0.00
929 2 0.00
930 3 0.00
931 2 0.00
932 4 0.00
934 1 0.00
935 5 0.00
936 19 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGG
GCGGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAA
CCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAG
AGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
ATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTT
TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAA
AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTT
GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
CCCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCG
ACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCTG
CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
Found at i:4906958 original size:26 final size:26
Alignment explanation
Indices: 4906922--4906976 Score: 92
Period size: 26 Copynumber: 2.1 Consensus size: 26
4906912 TGGTTCAATT
4906922 TTAGACTGGGAATGAACTCCGTAAGC
1 TTAGACTGGGAATGAACTCCGTAAGC
* *
4906948 TTAGACTGGGAATGATCTCCGTAGGC
1 TTAGACTGGGAATGAACTCCGTAAGC
4906974 TTA
1 TTA
4906977 AGTCAACCCA
Statistics
Matches: 27, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.27, C:0.18, G:0.27, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCCGTAAGC
Found at i:4909670 original size:898 final size:900
Alignment explanation
Indices: 4907626--4910186 Score: 3290
Period size: 898 Copynumber: 2.8 Consensus size: 900
4907616 ACTTCGTATG
* * *
4907626 CTTAGACTGGGAATGAACTCCGTATA--CTAAGCCAACAGAAGAAACGAGCAGG-CGGGCGGGCG
1 CTTAGACTAGGAATGAACTCCGTA-AGCCTAAGCCAACCGACGAAACGAGC-GGACGGGC-GGCG
* * * * *
4907688 GAC-GGTCGACGCAACGTC-GGCCAGAGAGACAGGATGCGCAAGTCGTGGATCGATAGGGTGGTA
63 GTCAGG-C-A--CTACG-CAGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
4907751 GGTGGGTTTAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTATATTCAT
123 GGTGGGTTTAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTATATTCAT
**
4907816 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACA
188 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
* * *
4907881 ATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTGAAATTTTTTCGGAAGGAGTTTTGGCCCCAAG
253 ATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTAGGAAGGAGTTTTGGCCCCAAA
* *
4907946 CTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAAACTCTAA
318 CTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAA
* * *
4908011 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATTGCTACTGC
382 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* * * *
4908076 CAACAAACCTGGT-AAATCTCCAAATGCTC-TTG-AGGAGGTGTGACGATCTTGAGGTTTGTGAG
447 CAGCAAACCT-ATAAAATCT-CAAATGCTCTTTGAAGG-GGTGTGA-GTTCTCGAGGTTTGTGAG
* * *
4908138 GGATAGGGGGCCAATTATAAAGGCCCAAGTACCAGCACCCATCGCCACATCATGTGTGCACCACC
508 GGATAGGGGGCCAA-TAT-AAGGGCCAAGTACCAGCACCCATC-ACACATCATGTGCGCA-CACC
* * ** *
4908203 CCCCTCGGGACCCCCCGATTCATCGGAACCCCAATGCCGTCGGTCA-GTTCTCC-GGAATGCTCC
569 CCCC-C-GG-CCCCCC-AATCACCGGAACCCCAATGCCACCGGTCAGGTTCTCCACG-ATGCTCC
* * * * * * *
4908266 GGC-AAGGTGCCACCGGCAAAG-AGAATGCGCACTAGCGCATTGCCCGAGCCTAAGCATGTGCTA
629 GGCGATGGTGCC-CCGACGAAGAAAAATGCGCACCAGCACA-TGCCCGAGCC-AAGCATGTGCTG
* * *
4908329 CCGTAACCCTCGGGTCTGGTCTGATCTTAGATTGGGGAATTGAACTTCCGTATGCTTATGACTGG
691 CCGCAACCCTC-GGTCTGGTCTGATCTTAGACT-GGGAA-TGAAC-TCCGTATGCTTATGACTAG
* * * * *
4908394 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGGCTGTGAGGGCGCTCCGCCGGCCAGA
752 AAATAAACTCCGTATGCCTAAGTAAACCCACGAAACGAGGCTGTGACGGCGCTCAGCCGGCCAGA
* * * **
4908459 GGGGGGATGGCGCAAGCTGGGGATCACAAGGTCCCCCTCTACGTGCTCTCAATCCTGCTGTCGGA
817 GGGGGGATGGCGAAAGCTGGGGATCACAAGGTCCCCCTATACGTGCTCTCAATCCTGCTGCCACA
*
4908524 ACCCTCATTCCGGTCCGAT
882 ACCCTCATTCCAGTCCGAT
* *
4908543 CTTAGATTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGT
1 CTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAACCGACGAAACGAGCGGACGGGC-GGCGGT
* * * *
4908608 CAGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGCAGGTGGGT
65 CAGGCACTACGCAGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4908673 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTGTGGGC-TGTAAATTCATACAATG
130 TTAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTTAT-GGCTTGTATATTCATACAATG
*
4908737 GTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
* ** *
4908802 AAAACTATTTGTTGTTCGGGATTTTTTAAAATATTTTT-GAAAGGAGTTTTGGCCCCAAACTTGG
259 AAAACTTTTTGCGGTTCGGGATTTTTTAAAAT-TTTTTAGGAAGGAGTTTTGGCCCCAAACTTGG
* * *
4908866 TAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAAGAAATTCAGCTAAAAACTGGAAGTGTAC
323 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * *
4908930 AAGATTTTGTGACCAATTGAGAAAAGTGTCCCCATTTGAGACACTTTAGTGGCTACTGGCAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
4908995 ACCTCTAAAATCTCAGATGCTCTTTGAAAGGGTGTGAGTTCTCGAGGTTTGCTGGGGGATAGGGG
453 ACCTATAAAATCTCAAATGCTCTTTGAAGGGGTGTGAGTTCTCGAGGTTTG-TGAGGGATAGGGG
* *
4909060 GCCAATATAAGGGCTAAGTACCAGCACCCATCATACATCATGTGCGCACACCCCCCCGGCCCCCC
517 GCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCC
* *
4909125 AATCACCGGAACCCCAATGCCACCGGTCAGGTTCTCCAACGATGCTCCGGCGATGGTGCCTCGAT
582 AATCACCGGAACCCCAATGCCACCGGTCAGGTTCTCC-ACGATGCTCCGGCGATGGTGCCCCGAC
* * *
4909190 GAAGAAAAATACGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCTGGT
646 GAAGAAAAATGCG-CACCAGCACATGCCCGAGCCAAGCATGTGCTGCCGCAACCCTCGGTCTGGT
* *
4909255 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTA-GACTAGAAATAAACTCCGTTTGCCTAAGT
710 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTATGACTAGAAATAAACTCCGTATGCCTAAGT
* *
4909319 AAACCCATGAAACGA-GC-GTGCCGGCGCTCAGCCGGCCAGAGGGGCAGGAT-GCGAAAGTCT-G
775 AAACCCACGAAACGAGGCTGTGACGGCGCTCAGCCGGCCAGAGGGG--GGATGGCGAAAG-CTGG
* * * * **
4909380 GGATCGAC-CGCGTCCCCCTATGCGTGCTGC-CAATCTTGCTGCCACAACCTTTCA-TCCAGTTT
837 GGATC-ACAAG-GTCCCCCTATACGTGCT-CTCAATCCTGCTGCCACAACC-CTCATTCCAGTCC
4909442 GAT
898 GAT
* * *
4909445 CTTAGACTGGGAATGAACTCCGTAAGCCTAAGCCAACCGATGAAACTAGCAGG-CGGGC-G-GGT
1 CTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAACCGACGAAACGAGC-GGACGGGCGGCGGT
* * * *
4909507 GA-GCACTATGCAGACTAGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
65 CAGGCACTACGCAGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
4909571 TTAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGG
130 TTAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGG
* **
4909636 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCAATTTTTCATGATTTTTT
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCA
* * *
4909701 AAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTAGGAAGGATTTTTGGCCCCAAACTTGGTG
260 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTAGGAAGGAGTTTTGGCCCCAAACTTGGTA
** * *
4909766 GGTGTGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTCAACTAAAAACTCGAAGTGTACAA
325 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
4909831 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCATACACTTTAATGGCTACTCGCAGCAATC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* *
4909896 CTATAAAATCTCAAATGCTCTTT-ACGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATATGGGG
455 CTATAAAATCTCAAATGCTCTTTGA-AGGGGTGTGAGTTCTCGAGGTTTG-TGAGGGATAGGGGG
* * * * * *
4909960 CCAATATAAGGGCCAAGTACTAGAACCAATCGCACATCATGTGGGCACACCCCCCTGGCACCCCC
518 CCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGC-CCCCC
* * * * *
4910025 GATCGCCGGAACCCCAATG-CAGCCGGTTAGGTTCTCCAGTGATGCTCCGACGATGGTGCCCCGA
582 AATCACCGGAACCCCAATGCCA-CCGGTCAGGTTCTCCA-CGATGCTCCGGCGATGGTGCCCCGA
* * * * *
4910089 CGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCTAGCATGTGCTGCCGCAACCCTCAGTCAGG
645 CGAAGAAAAATG-CGCACCAGCACATGCCCGAGCCAAGCATGTGCTGCCGCAACCCTCGGTCTGG
*
4910154 TCTGATCTTAGACTGGGAATGAACTTCGTATGC
709 TCTGATCTTAGACTGGGAATGAACTCCGTATGC
4910187 CTAAGTCAAC
Statistics
Matches: 1453, Mismatches: 158, Indels: 83
0.86 0.09 0.05
Matches are distributed among these distances:
897 8 0.01
898 255 0.18
899 201 0.14
900 169 0.12
901 16 0.01
902 134 0.09
903 18 0.01
904 5 0.00
905 30 0.02
906 32 0.02
907 36 0.02
908 25 0.02
909 16 0.01
910 13 0.01
911 22 0.02
912 24 0.02
913 110 0.08
914 16 0.01
915 254 0.17
916 8 0.01
917 25 0.02
918 34 0.02
919 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (900 bp):
CTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGCGGTC
AGGCACTACGCAGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTGCAAGCCAATGCCATTTTTATGGCTTGTATATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAA
AACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTAGGAAGGAGTTTTGGCCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TATAAAATCTCAAATGCTCTTTGAAGGGGTGTGAGTTCTCGAGGTTTGTGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCCCCCCAATC
ACCGGAACCCCAATGCCACCGGTCAGGTTCTCCACGATGCTCCGGCGATGGTGCCCCGACGAAGA
AAAATGCGCACCAGCACATGCCCGAGCCAAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATC
TTAGACTGGGAATGAACTCCGTATGCTTATGACTAGAAATAAACTCCGTATGCCTAAGTAAACCC
ACGAAACGAGGCTGTGACGGCGCTCAGCCGGCCAGAGGGGGGATGGCGAAAGCTGGGGATCACAA
GGTCCCCCTATACGTGCTCTCAATCCTGCTGCCACAACCCTCATTCCAGTCCGAT
Found at i:4911231 original size:26 final size:26
Alignment explanation
Indices: 4911195--4911247 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4911185 CCAATCCGAT
* *
4911195 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4911221 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4911247 C
1 C
4911248 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:4912701 original size:26 final size:26
Alignment explanation
Indices: 4912672--4912724 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4912662 TCGGTCCGAT
4912672 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4912698 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4912724 C
1 C
4912725 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4913478 original size:11 final size:11
Alignment explanation
Indices: 4913462--4913494 Score: 66
Period size: 11 Copynumber: 3.0 Consensus size: 11
4913452 CGGTCAGGTT
4913462 CTCCGACGATG
1 CTCCGACGATG
4913473 CTCCGACGATG
1 CTCCGACGATG
4913484 CTCCGACGATG
1 CTCCGACGATG
4913495 GTGCCCCGGT
Statistics
Matches: 22, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 22 1.00
ACGTcount: A:0.18, C:0.36, G:0.27, T:0.18
Consensus pattern (11 bp):
CTCCGACGATG
Found at i:4913612 original size:26 final size:26
Alignment explanation
Indices: 4913575--4913627 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4913565 CCAGTCTCAT
*
4913575 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
*
4913601 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
4913627 C
1 C
4913628 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCAGTATG
Found at i:4914082 original size:910 final size:892
Alignment explanation
Indices: 4912008--4914099 Score: 2946
Period size: 891 Copynumber: 2.3 Consensus size: 892
4911998 GAGGGTGGGA
* ** * *
4912008 GGGCGGGCGGGCGGGCGCCACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGGTAGGGT
1 GGGCAGGCGGGCGGGC-ATACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* * *
4912073 GGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
65 GGTAGGTGGGTTTAGGCACATCTTCATATTTTTG--TGCCAATGCCATTTTTATGGCCTATAAAC
*
4912138 TCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGACGACTCATTTTCTATTTTT
128 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTT
* ** * * *
4912203 CACGATTTTCAAAACTTTTTGTGGTTCATGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCC
193 CACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTGGCCC
* *
4912268 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAACATTTCAGCTAAAAACTC
258 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTC
4912333 GAAGTGTACAAGATTTTGTGACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
323 GAAGTGTACAAGATTTTGTGACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * * *
4912398 TCACAGCAAACCTGTAAAATGTAAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
388 TCACAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGAGGGTGTGAATTCTCGAGGTTTCATGAG
* *
4912463 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACGCCCCCC
453 GGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACGCCCCCC
* * *
4912528 AGCCCCCCCGATCGCCGGAACCCTAATGCTGCCGGTCAGGTTCTCCAGCGATGCTCCGATGATGG
518 AGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGG
* * ** * * *
4912593 TGCCTCGACGAAGAAAAATGCAGCACCAGCAGATGCCCGTGCCCAGGATGTGCTGGGACAAGCCT
583 TGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCGACAACCCT
* * * *
4912658 CGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
648 CGGTCCAGTCCGATCTTAGACAGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCAGTAT
* * *
4912723 GCCTAAGTCAACACACGAAACGAGCGTGCGGGTGCTCAGCCGGCTAGAGGGGCATGATGCGCAAG
713 GCCTAAGTCAACACACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAG
*
4912788 CCAGGGATCAGTCGGGTCCCCCTCTACATGCTACCAATCCTGCTGCCACAACCCTCGGTCTGGTC
778 CCAGGGATCAGTCGGGTCCCCCTCTACATGCTACCAATCCTGCTGCCACAACCCTCGGTCCGGTC
* * * *
4912853 CAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACTGACGAAAC
843 CAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAAC
* *
4912903 --G-A-GCGGGCGGGCACTACGCCAGG-CAGAGAGACGGGATGCGCATGCCGTGGATCGATAGGT
1 GGGCAGGCGGGCGGGCA-TACGCC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
*
4912963 TGGTAGGTGGGTTTAGGCACATCTTCATATTTGTGCGTGCCAATGCCATTTTTATGGCCTATAAA
64 TGGTAGGTGGGTTTAGGCACATCTTCATATTT-T-TGTGCCAATGCCATTTTTATGGCCTATAAA
*
4913028 CACATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTT
127 CTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTT
*
4913093 TCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG-CATTTTGGC
192 TCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAC-TTTTGGC
*
4913157 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCTTGCACAAAACAATTCAGCTAAAAAC
256 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAAC
*
4913222 TCGAAGTGTACAAGATTTTGTGACTATTTG-AAATAAGTGTCCCCATTTCAGACACTTTAATGGC
321 TCGAAGTGTACAAGATTTTGTGACCATTTGTAAA-AAGTGTCCCCATTTCAGACACTTTAATGGC
** *
4913286 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAATTCTCGAGGTTTCAT
385 TACTCACAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGAGGGTGTGAATTCTCGAGGTTTCAT
** *
4913351 GAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAGTTCATGTGTGTACAC-C
450 GAGGGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACGC
* * *
4913415 CCCCCGGCCCCCCCGATCGCCGGATCCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGAC
513 CCCCCAGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--C-A------G-C
** ** *
4913480 GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCTCAAGCCCAGCAT
567 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGCAT
4913545 GTGCTGCCG-CAACCCTCGGTCCAGTCTC-ATCTTAGACAGGGAATGAACTCCGTATGCTTAGAC
632 GTGCTG-CGACAACCCTCGGTCCAGTC-CGATCTTAGACAGGGAATGAACTCCGTATGCTTAGAC
* *
4913608 TGGGAATGAACTCAGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAG
695 TGGGAATGAACTCAGTATGCCTAAGTCAACACACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
** ** ** * * * * * * ** *
4913673 AGGGGTGGGATGCGCATTCTGGGGATCGGTCGGGT-CTCTTTTGCGTGCTGTCGATCCTGCTGCC
760 AGGGGCAGGATGCGCAAGCCAGGGATCAGTCGGGTCCCCCTCTACATGCTACCAATCCTGCTGCC
* * **
4913737 ACAATCCTTGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACAA
825 ACAACCCTCGGTCCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGAC--
4913802 AACAAGC
888 AA-AA-C
* * *
4913809 GGGCAGGCGGGCGGGCATAACGCCGGCCAGAGAGATGGGATGTGCAAGCCATGGATCGATAGGGT
1 GGGCAGGCGGGCGGGCAT-ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
** *
4913874 GGTAGGTGGAATTAGGCACATCCTCATATTTCTATGTGCCAATGCCATTTTTATGGCCTATAAAC
65 GGTAGGTGGGTTTAGGCACATCTTCATATTT-T-TGTGCCAATGCCATTTTTATGGCCTATAAAC
* *
4913939 TCATACATTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
128 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTT
4914004 CACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTGGCCC
193 CACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTGGCCC
* * *
4914069 TAAACTTGGTAGACGTAATCCTGGTATTTTT
258 CAAACTTGGTAGACGTGATCCTTGTATTTTT
4914100 ATGGCTACAG
Statistics
Matches: 1060, Mismatches: 105, Indels: 49
0.87 0.09 0.04
Matches are distributed among these distances:
890 3 0.00
891 456 0.43
892 48 0.05
893 6 0.01
895 1 0.00
896 1 0.00
902 77 0.07
903 196 0.18
904 3 0.00
905 2 0.00
906 1 0.00
908 1 0.00
909 4 0.00
910 260 0.25
911 1 0.00
ACGTcount: A:0.24, C:0.24, G:0.25, T:0.27
Consensus pattern (892 bp):
GGGCAGGCGGGCGGGCATACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
GTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGCCAATGCCATTTTTATGGCCTATAAACTCA
TACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCAC
GATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTGGCCCCAA
ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAA
GTGTACAAGATTTTGTGACCATTTGTAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTCA
CAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGAGGGTGTGAATTCTCGAGGTTTCATGAGGGA
TAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACGCCCCCCAGC
CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGC
CCCGACGAAGAAAAATGCAGCACCAGCACATGCCCAAGCCCAGCATGTGCTGCGACAACCCTCGG
TCCAGTCCGATCTTAGACAGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCAGTATGCC
TAAGTCAACACACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCA
GGGATCAGTCGGGTCCCCCTCTACATGCTACCAATCCTGCTGCCACAACCCTCGGTCCGGTCCAA
TCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAAC
Found at i:4914420 original size:26 final size:26
Alignment explanation
Indices: 4914382--4914434 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4914372 CCAGTCTCAT
*
4914382 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4914408 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4914434 C
1 C
4914435 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4914957 original size:26 final size:26
Alignment explanation
Indices: 4914920--4914972 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4914910 CCAGTCTCAT
*
4914920 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
*
4914946 CTTAGACTGGGAATGAACTCAGTATG
1 CTTAGACAGGGAATGAACTCAGTATG
4914972 C
1 C
4914973 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCAGTATG
Found at i:4916736 original size:26 final size:26
Alignment explanation
Indices: 4916700--4916755 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
4916690 TCGGTCTGAT
*
4916700 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4916726 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4916752 CTTA
1 CTTA
4916756 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4917415 original size:894 final size:890
Alignment explanation
Indices: 4914581--4917425 Score: 4020
Period size: 883 Copynumber: 3.2 Consensus size: 890
4914571 CCATATGAAA
*
4914581 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
*
4914646 TGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
* * *
4914711 GGATAGAGGGCCAATAAAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACA-CCCCA
131 GGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * * **
4914775 TGGCCCCCCCGATCATCGGATCCCCAATGCCGTCGGTTAGGTTCTCCGGCGATGCTCCGACGATG
196 CGGCCCCCCCGATCGTCGGATCCCCAATGCCGCCGGTCAGCTTCTCCGGCGATGCTCCGGTGATG
** *
4914840 GTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATG-CTCGAGCCCAGCATGTGCTACCGCAACC
261 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCT-GAGCCCAGCATGTGCTACCGCAACC
* * * ** *
4914904 CTCGGTCCAGTCTCATCTTAGACAGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCAGT
325 CTC-GTTCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * *
4914969 ATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCA
389 ATGCCTAAGTCAACCCACAAAATGAGCGTGC-GGTGCTCAGCCGGCCAAAGGGGCGGGATGC-CA
* * * * * * * * * *
4915034 TTCTGGGGATCGGTCGGGTCTCTTTTGCGTGCTGTCGATCCTGCTGCCACAATCCTTGGTCCGGT
452 -AC--CGGATC-GTCGGCTCCCCTTTGCGTGCTGTCGATCTTGCTGCCGCAACCCTCGGTCCAGT
* ** * * *
4915099 TTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACAAGCGGGCAGGC--
513 CTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGG
* * * *
4915162 G-GGCGGGCA-TAACGCCGGCCAGAGAGATGGGATGTGCAAGCCATGGATCGATAGGGTGGTAGG
578 GCGGCGGGCACT-ACGCAGGCCAGAGAGCTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
** * * * *
4915225 TGGAATTAGGCACATCCTCATATTTCTATGTGCCAATGCCATTTTTATGGCCTATAAACTCATAC
642 TGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTATAAATTCATAC
*
4915290 ATTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGAT
707 AATGG---C-TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGAT
4915355 TTTTGAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCAAACT
768 TTTTGAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCAAACT
4915420 TGGTAGACGTGATCCTTGTATTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTC
833 TGGTAGACGTGATCCTTGTATTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTC
4915478 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
* *
4915543 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGATGGTGTGAATTCTCGAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
* * * *
4915608 GGATAGAGGGCCAATATAAGGGACAAGTGCCAGCACCCATCGCAC-TCATGTTCGTACACCCCCC
131 GGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * *
4915672 CGGCCCCCTCAATCGCCGGATCCCCAATGCCACCGGTCA-CATTCT-CTGCTGATGCTCCGGTGA
196 CGGCCCCCCCGATCGTCGGATCCCCAATGCCGCCGGTCAGC-TTCTCCGGC-GATGCTCCGGTGA
* * **
4915735 TGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCTGAGCCCAGCATCTGCTTTCGCAAC
259 TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGCAAC
* * ** * *
4915800 CCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCTATATGCTTAGACCGGGAATGAACTCCA
324 CCTCGTTC-GGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
*
4915865 TATGCCTAAGTCAACCCACAAAATGAGCGTGCGGTGCTCAGTCGGCCAGAA-GGGCGGG--G---
388 TATGCCTAAGTCAACCCACAAAATGAGCGTGCGGTGCTCAGCCGGCCA-AAGGGGCGGGATGCCA
* ** * * * *
4915924 ATC-GATCG-CTTC-CCCCTCTGCGTGCTGCCGATCTTGCTGCCGCAACCCTCAGTCTAGTCTGA
452 ACCGGATCGTCGGCTCCCCTTTGCGTGCTGTCGATCTTGCTGCCGCAACCCTCGGTCCAGTCTGA
* * * * *
4915986 TCTTAGACTATGAATGAACTCCATATGCCTAAGCCAATCGATGAAACGAGTGGGC-AG-GTG-GG
517 TCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGGGCGG
*
4916048 CGGGCACTACCCAGGCCAGAGAGAC-GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
582 CGGGCACTACGCAGGCCAGAGAG-CTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
4916112 TTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATG
646 TTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAATG
4916177 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTT
711 G---C-TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTT
4916242 GAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCAAACTTGGT
772 GAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCAAACTTGGT
4916307 AGACGTGATCCTTGTATTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTC
837 AGACGTGATCCTTGTATTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTC
4916361 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
* * *
4916426 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTGGAGGTTTTATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
* *
4916491 GGATAGGGGGCCAATATACGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
131 GGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * *
4916556 CGGCCCCCCCGATCGTC-GAACCCCAATGCTGCCGGTCAGCTTCTCCGGCGATCCTCCGGTGATG
196 CGGCCCCCCCGATCGTCGGATCCCCAATGCCGCCGGTCAGCTTCTCCGGCGATGCTCCGGTGATG
* *
4916620 GTGCCCCGACGAAGAAAAATGCGGAACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACCC
261 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGCAACCC
4916685 TCGATTCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
326 TCG-TTCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * *
4916750 TGCTTAAGTCAACCCATAAAACGAGCGTGCAGGTGCTCAGCCGGCCAAAGGGGCGGGATGCACAA
390 TGCCTAAGTCAACCCACAAAATGAGCGTGC-GGTGCTCAGCCGGCCAAAGGGGCGGGATGC-CAA
* **
4916815 GCCGGATCGATCGGCTCCCCTTTCGCGTGCTGTCTATCTTGCCACCGCAACCCTCGGTCCAGTCT
453 -CCGGATCG-TCGGCTCCCCTTT-GCGTGCTGTCGATCTTGCTGCCGCAACCCTCGGTCCAGTCT
*
4916880 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGGGC
515 GATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGGGC
* *
4916945 AGGCGGGCACTACGCTGGCCAGAGAGCTGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTG
580 -GGCGGGCACTACGCAGGCCAGAGAGCTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
4917010 GGTTTAGGCA-ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCACACAA
644 GGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAA
* * * * * *
4917074 T-G-TAAGCCTTCATGTGAAGTTTCATGTCAAAACGACTCGTTTTCTATTTTTCACGATTTTTAA
709 TGGCTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTTGA
** * * * * * *
4917137 AACTTTTTACGGTTCAAGATTTTTCAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
774 AACTTTTTGTGGTTCGAGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCAAACTTGGTAG
* *
4917202 ACGTGATCCTAGTATTTTTGTTGGCATGCA-TAAAACAATTCAGCTAAAAACTC
839 ACGTGATCCTTGTATTTTT-TTGGCATGCACAAAAAC-ATTCAGCTAAAAACTC
* *
4917255 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAAACACTTTAATGGCTAT
1 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
* * *
4917320 TGGCAGCAAACCTGTAAAATCTCAAATGCCCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
66 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
4917385 GGATAG-GGGTCCAATATAAGGGCCAAGTACCAGCA-CCATCG
131 GGATAGAGGG-CCAATATAAGGGCCAAGTACCAGCACCCATCG
4917426 AAACCCCAAT
Statistics
Matches: 1747, Mismatches: 165, Indels: 76
0.88 0.08 0.04
Matches are distributed among these distances:
882 1 0.00
883 733 0.42
884 61 0.03
885 1 0.00
886 5 0.00
890 1 0.00
891 1 0.00
892 5 0.00
893 144 0.08
894 183 0.10
895 6 0.00
896 124 0.07
897 355 0.20
898 5 0.00
899 53 0.03
900 69 0.04
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.26
Consensus pattern (890 bp):
AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTAC
TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAG
GGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
CGGCCCCCCCGATCGTCGGATCCCCAATGCCGCCGGTCAGCTTCTCCGGCGATGCTCCGGTGATG
GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTACCGCAACCC
TCGTTCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
GCCTAAGTCAACCCACAAAATGAGCGTGCGGTGCTCAGCCGGCCAAAGGGGCGGGATGCCAACCG
GATCGTCGGCTCCCCTTTGCGTGCTGTCGATCTTGCTGCCGCAACCCTCGGTCCAGTCTGATCTT
AGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGTGGGCGGGCGGGCGGCGGG
CACTACGCAGGCCAGAGAGCTGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTATAAATTCATACAATGGCTAA
GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTTGAAACTTTT
TGTGGTTCGAGATTTTTTAAAATTTTTCCAGAAGGAGTTTTTGTCCCAAACTTGGTAGACGTGAT
CCTTGTATTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACTC
Found at i:4917582 original size:26 final size:26
Alignment explanation
Indices: 4917553--4917605 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4917543 CCGGTCCGAT
4917553 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4917579 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4917605 C
1 C
4917606 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4922134 original size:871 final size:871
Alignment explanation
Indices: 4917697--4926019 Score: 9284
Period size: 870 Copynumber: 9.4 Consensus size: 871
4917687 GCCCTCTGCG
* *
4917697 TGTGA-CATTTGAAAAAATTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* **
4917761 AAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTTC-AGGTTTGATGAGGGATAGGGGGTAAAT
66 AAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTC-TCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * * * *
4917825 ATAAGGGCCAAGTACCAGCATCCATCGTAAATCTTGTGCGCACACCCCCTAGCCCCCCCGATCGT
129 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCCGATCGT
* * * * * * *
4917890 CGGAACCTCAATGTCGTCGGTCAGGTTCTCCGATGATGATCCAACGATGGTGGCCCGATGAAGAA
193 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAA
* ** **** * * *
4917955 AAATACGTTACCAGCACATGCCCGAGCCCAGCATGTGCTGTGGTAACCCTCGGTCCGATCTGATC
258 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGATC
* * * * * *
4918020 TTAGACTGGGAATGAACTACGTACGCCTAAGTCAACCCACAAAACGAGTGTGCGGGCGCACAGCC
323 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGCC
* * * * * *
4918085 GGCCAGAGGGG-TGAGATACGCAAGCCGGGGATCCGTCGAGTCCTCC-TCTACGTGTTGCCGATC
388 GGCCAGAGGGGCAG-GATGCGCAAGCCGGGGATCAGTCGGGTCC-CCTTCTACGTGCTGTCGATC
* * * * **
4918148 CTATTGTCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCCA
451 CTACTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
4918213 ACCAACGAAACAAGCGGGCGGGCGGGCGGACACTACGTCAGCCAGAGAGACGGGATGCACAAGTC
516 ACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
4918278 GTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCGCATGCCAATGCCATTT
581 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* * *
4918343 TTATGGCTTGTAAATTCATACAATGGTCCCTTATGACC-TCACGTGAAGTTTCATGGGAAGGTGA
646 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTGAAGTTTCATGGCAAGATGA
* * *
4918407 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAATTTTTTCG
710 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCG
* * *
4918471 AAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAAAA
775 GAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
4918536 ATTCAGCTAAAAACTCGAAGTGTACAGGTTTT
840 ATTCAGCTAAAAACTCGAAGTGTACAAGATTT
*
4918568 TGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* * *
4918633 AAATCTGAAATGCTCTTTAAGGGGTTGTGTGTTCTCGAGGTTTGATGAGGGATA-GGGGCGAATA
66 AAATCTCAAATGCTCTTTAAGGGG-TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * * * *
4918697 TAAGGGCCAAGTACTAGCACCCATCACACATCATGTGTGCACGCCCCCCGACCCCCCCGATTG-C
130 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCCCGATCGTC
* * * * *
4918761 TAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGATGCTCTGACGATGGTACCCC-AGTGAAGA
194 -GGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGA-CGAAGA
* * * * * ***
4918825 AAAATGTGACACCAGCACATTCCC-AGGCCCAGCATGTGCTGCTACAACCCTCGATCTAATCCGA
257 AAAATGCGGCACCAGCACATGCCCGA-GCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGA
* *
4918889 TCTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAA-TGAGCGTGCGGGCGCTCC
321 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACT-AGCGTGCGGGCGCTCA
* * ** * * * * **
4918953 GCCAGCCAGA-GGGCTGGGATGCGCAAGCCGATGATCAGTTGGGTCCCCCTCTGCATGCTACCGA
385 GCCGGCCAGAGGGGC-AGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCTTCTACGTGCTGTCGA
* * * * ** * *
4919017 TCCTACTACCGCAACCCTTGGTTTGGTCTAATCTTAGACAAGGAATGAACTCCGTATGCTTGAGC
449 TCCTACTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * **
4919082 CAACAGACGAAATGAGCTGGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCG
514 CAACCGACGAAACGAGC--G--GGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
* * * *
4919147 CAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGAACATCTTCATATTCCTGTGTGCCAATG
575 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
4919212 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACC-TCACGTGAAGTTTCATGGGA
640 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTGAAGTTTCATGGCA
* * * ** * *
4919276 AGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTT-AAATT
704 AGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAATT
* * * *
4919340 TTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTGTTGGCGTGCAC
769 TTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* *
4919404 AAAAAAATTCAGCTAAAAACTC-AGAGTGTATAAGTTTT
834 AAAAAAATTCAGCTAAAAACTCGA-AGTGTACAAGATTT
* * *
4919442 TGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATAGCTATTGGCAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
4919507 AAATCTCAAATGCTCTTTAAGGGTGAGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGACAATA
66 AAATCTCAAATGCTCTTTAAGGG-GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * * *
4919572 TAACGGCCAAGTACCAGCACCCATCGCGCATCATGTGCACACACCCCTCGGCCCCTCCGATAGT-
130 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC-CCGATCGTC
* **
4919636 GGAAACCCCAATGCCGTCGGTCAGGTTCTCC------G----G-CGATGGTGCCCCGGTGAAGAA
194 GG-AACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAA
** * ** * * * *
4919690 AAATGTTGCACCAGCACATGGCCGAGCCCAATATGTGCGGCCGCAACCCTCGGTCCAGTCCGATC
258 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGATC
4919755 TTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCTTATTCCTAAGTCAACCCA
323 TTAGACTGGGAATGAACT-C-----C---G--T----ATG-----------CCTAAGTCAACCCA
** * * * * ** ** * ** *
4919820 TTAAACAAGCGTGAGAGCGTTCAGCCAACCAGAGGGGTGGGATGAGCAAGCCGAAGAT-TGATCG
362 CGAAACTAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAG-TCG
* ** * * * * * *
4919884 GGTCCCCTACTGTGTGCTGCCGATCCTACTGCCGCAACCCTTGGTCCGGTCTGATATTACACT-A
426 GGTCCCCTTCTACGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGG
* * * * * *
4919948 GATTGAACTTCGTATGCCTAAGCCAACTGATGAAATGAGCGGGAGGGCGGACGGGCGGGCACTAC
491 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC----GGGCGGGCGGGCGGGCACTAC
* *
4920013 GTCGGCCAGAGAGACGGGATGCGCAAGCCATAGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
552 GTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
4920078 CTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGC
617 CTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
*
4920143 CTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAAGTTTTTA
682 CTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
** * * *
4920208 CAGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTAGTCCCAAACTTGGTAGACATGATCC
747 TGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCC
* * * *
4920273 TTGTATTTTTTTTGGCATGCATAAAAAAATTTAGCCAAAAACTCGAAGTGTACAAGATTT
812 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
*
4920333 TGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
4920398 AAATGTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
66 AAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * *
4920463 ACGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCTCGGCCCCCCGATTGTCGG
131 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
* * *
4920528 AACCCCAACGCCGCCGGTCAGGTTCTCC-AGTGATGCTCCAACGATGGTGCCCCGACAAAGAAAA
196 AACCCCAATGCCGCCGGTCAGGTTCTCCGA-TGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* * *
4920592 ATGCGGCACCAGCACATGCCCAAGCCCAGCATATGCTACCACAACCCTCGCTCCGGTCCGATCTT
260 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGATCTT
* * * *
4920657 AGACTGGGAATGAACTCCGTATGCCTAAGTCAAGCGACGAAACTAGCGTGCGAGCGCTCAGTCGG
325 AGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGCCGG
* * * ** * * *
4920722 CTAGAGGGGCAGGATGCACAAGCCGGGGATCGGTCGGGTCCTTTTTTACGTGCTGTCGATCTTGC
390 CCAGAGGGGCAGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCTTCTACGTGCTGTCGATCCTAC
* * * *
4920787 TACCGCAACCCTCGG-CTGATCTGATCTTAGACTGGGAATCAACTCTGTATGCCTAAGCCAACCG
455 TGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
4920851 AAGAAACGAGCGGGTGGGCGGGCGGGCACTACGTCGGCTAGAGACACCGGATGCGCAAGCCGTGG
520 ACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* **
4920916 ATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTAT
585 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
4920981 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGT
650 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGT
* *
4921046 TTTCTATTTTTCATGATTTTTGAAACTTTTTATAGTTTGGGATTTTTTAAAATTTTTTTGGAAGG
715 TTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAGG
* * * *
4921111 AGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCATAAAAAAATTTA
780 AGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
4921176 GCTAAAAACTCGAAGTGTACAAGATTT
845 GCTAAAAACTCGAAGTGTACAAGATTT
* * *
4921203 TGTGACCATTTGAAAAACGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTATA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
4921268 AAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAT
66 AAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* *
4921333 ACGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
131 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
* * * * *
4921398 AACCCCAACGCCGTCGGTCAGGTTCTCCGATGATGCTCTGACGACGGTGCCCCGACAAAGAAAAA
196 AACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAA
* * *
4921463 TGCGGCACCAGCACATGCCCAAGCCCAGCATATGCTACCACAACCCTCGCTCCGGTCCGATCTTA
261 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGATCTTA
* * * *
4921528 GACTGGGAATGAACTCCGTATGCCTAAGTCAAACAATGAAACTAGCGTGCGGGCGCTCAGTCGGC
326 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGCCGGC
* * ** * * *
4921593 TAGAGGGGCAGGATGCACAAGCCGGGGATCAGTCGGGTCCTTTTTTACGTGCTGTCGATCTTGCT
391 CAGAGGGGCAGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCTTCTACGTGCTGTCGATCCTACT
* * * * * *
4921658 ACCGCAACACTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACCGG
456 GCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * * *
4921723 GGAAACGAGCGGGCAGGCGGGTGGGCACTACGTCGGCTAGAGAGACTGGATGTGCAAGCCGTGGA
521 CGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
4921788 TCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATG
586 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
* * * *
4921853 GCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTGATGGAAAGACGACTCGTT
651 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTT
*
4921918 TTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAAATTTTTT-GGAAGG
716 TTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTT-AAAATTTTTTCGGAAGG
* * * * * *
4921982 AGTTTTGGCCCCAAGCCTGGTAGACATGATCCTTATATTTTTGTTGGCATGTACAAAAAAATTCA
780 AGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
4922047 GCTAAAATCTCCAAGTGTACAAGATTT
845 GCTAAAAACTCGAAGTGTACAAGATTT
* * *
4922074 TGTGACCATTCGAAAAAAGTGTCCCAATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
4922139 AAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
66 AAATCTCAAATGCTCTTTAAGGG-GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * **
4922204 TAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCCGATCACC
130 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCCCGATCGTC
*
4922269 GGAACCCCAATGCCGTCGGTCAGGTTCTCC---G--G-T-----GATGGTGCCCCGACGAAGAAA
194 GGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAA
* *
4922323 AATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAATCCTCAGTCCGGTCCGATCT
259 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-C-G--C--TC-
4922388 TAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
313 ----C--GG--T---C-C-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * * * *
4922453 GAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGCGCAGGATGCGCAAGCCGGGGAT-TGACCGG
363 GAAACTAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAG-TCGG
* * * *
4922517 GTCCCCCTCTACATGC--T-G--CC-A----C-C-ACCCTCGGTCCGGTCTGATCTTAGACTAGG
427 GTCCCCTTCTACGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGG
* * * **
4922570 AATGAACTCC-TATGCCTAAGCCAACCAACGAAACGAGCAGACGGATGGGCGGGCACTACGTCGG
492 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGG
*
4922634 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCA
557 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA
* *
4922699 TATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCA
622 TATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCA
* * * * * ** ** *
4922764 TGTTAAGTTTCATGGCAAGACGACTCATTTTTCTATTTTTTATGATTTTCAAAACTTTTTGCGAT
687 CGTGAAGTTTCATGGCAAGATGACTC-GTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGT
* * * * * * *
4922829 TTTGGATTTTTTAAAATTTTTTCAGAAGAAGTTTTGGCCCCAAAGTTGGTAGCCTTGATCCTTGT
751 TTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGT
* * * *
4922894 ATTTTTGTTGGCATTCACAAAAAAATTCAGCTACAAACTCGAGGTCTACAAGATTT
816 ATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
** * *
4922950 TGTGACCATTTGAAAAGCGTTTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGCA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
4923015 AAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCTAATA
66 AAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * *
4923080 TAGGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCATCG
130 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCG
* * * * * *
4923145 AAACCCTAACGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGCAAAGAAAA
195 GAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* * * * *
4923210 ATGTGGCACCAGCGCATGCCCGAGCCCAACATATGCTACCACAACCCTCGGTCCGATCTGATCTA
260 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T-CG--C---TC--
* *
4923275 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTACGTCAACCCACG
313 ---C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * ** * * *
4923340 AAACTAGCGTACGGGTGCTCAGCCGACTAGAGGGGTGGGATGCGTAAGTCGAGGATC-GATCGGG
364 AAACTAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAG-TCGGG
* * ** * * * * * *
4923404 TCCCCTTTTGCGTGCCCTTGATCCTGCTGCCACAACCCTCAGTCTGATCTGATCTTAGTCTGGGA
428 TCCCCTTCTACGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGA
* *
4923469 ATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCAGGCGGGCGGGCGGGCACTACGTCGGC
493 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGC
** *
4923534 CAGAGAGACCAGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
558 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT
* * *
4923599 ATTTCTACGTGCCAATGCCATTTTTATGGTTTGTAAATTCATACAATGGTACCTTAAGCCTTCAC
623 ATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC
* *
4923664 GTGAAGTTTCATGGAAAGATGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTT
688 GTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTT
* * *
4923729 GGGATTTTTTAAAATTTTTTCAGAAGGA-TATTTAGCCCCAAGCCTGGTAGACGTGATCCTTGTA
753 GGGATTTTTTAAAATTTTTTCGGAAGGAGT-TTTAGCCCCAAACTTGGTAGACGTGATCCTTGTA
4923793 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
817 TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
4923848 TGTGACGATTTGAAAAAAGTCTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
4923913 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG-GAGGATAAGGGGCCAAT
66 AAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAG-GGATAGGGGGCCAAT
* * * * *
4923977 ATAAGGGCCAAGTACTAGCACCCATTGCAGATCATGTGCGCAAACCCCCCGGCCCCCTGATCGTC
129 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTC
* * *
4924042 GGAACCCCAATGCCGCCGGCCAGGTTCTCCAGA-GATGCTCCGGCGATGGTGCCCCAACGAAGAA
194 GGAACCCCAATGCCGCCGGTCAGGTTCTCC-GATGATGCTCCGACGATGGTGCCCCGACGAAGAA
* * * * * * *
4924106 AAATGTGGCACCAGCACATGCTCGAGCCTAACATGTGCTGCCACAACCCTCGGTCTGATCCGATC
258 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGATC
* * * *** * *
4924171 TTAGACTGGGAATGAACTCCGTATG-CTTAGACTAGGAATGAACATCTGATG-TTAGACTGGGAA
323 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA-A-CT-A-GCGT-G-C-GGG--
* * ** * *
4924234 TGAACTCCGTATGCCTAAGTCAACCTACGAAACAAGCGTGGGGGCGCTCAGCCTGCCAGAGGGGC
379 CG--CT-C--A-GCC---G---GCC-A-G-----AG-G-GGCAG-GAT--G-C-G-CA-A--GCC
** *** **
4924299 GGGTTGCGCAAGTCGGGGATCGATCGGGTACCCCTCTGTGTGCTGTCGATCCTACTGCCGCAACC
414 GGG--GATC-AGTCGGGTCCCCTTC---TA-----C---GTGCTGTCGATCCTACTGCCGCAACC
* * ** * * * *
4924364 CTCGGTCCGGCCCAATCTTAGACTGGGAATGAACTTCGTATGCCGAAGCTAACCGATGAAACGAG
465 CTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG
* *
4924429 CGGGTGGGAGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAAACGGGATGCGCAAGCCGTGGAT
530 C--------GGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
* * *
4924494 CGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTGTGCGTGCCAATGCCATTTTTCTGG
587 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
* *
4924559 GTTGTAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTT
652 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTT
*
4924624 TCTATTTTTCATGATTTTTGAAACTTTTTACT-GTTCGGGATTTTTTAAAATTTTTTCGGAAGGA
717 TCTATTTTTCATGATTTTTGAAACTTTTTA-TGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGA
* * *
4924688 GTTTTAGCCCCAAACTTGGAAGACGTGATCTTTGTATTTTT-TTCAGCATGCACAAAAAAATAT-
781 GTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAAT-TC
*
4924751 AGCTAAAAACTCAAAGTGTACAAGATTT
844 AGCTAAAAACTCGAAGTGTACAAGATTT
* * *
4924779 TGTGACCATTTGAAAAAAGTGTCCCCATTTTA-AGCACTTTAATGGCTACTGGTAGCACACCTGT
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA-CACTTTAATGGCTACTGGCAGCAAACCTGT
*
4924843 AAAATCCCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
65 AAAATCTCAAATGCTCTTTAAG-GGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * * *
4924908 ATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGGGCACACCCCCCCGACCGCCTCGATCG
129 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC-CCCCGATCG
* * * * ** * *
4924973 TCGAAACCCCAATGTCGCCGTTCATGTTCTCCGGCGATGCTCCGACGATGGTGCCACGATGAAGA
192 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * * * * **
4925038 AAAATACAGCACCAGCAGATG-CCGAGCCCAGCATCTACTGTCGTAACCCTCGGTCTGGTCTGAT
257 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--TC--G-C---T
* *
4925102 CTTAAACTGGGAATGAACTCCGTATGCTTAGAATGGGAATGAACTCCGAATGCCTAAGTCAACCC
312 C-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * * * * *
4925167 ACGAAA-TGAGCATGCGGGCGCTCAGCAGGCCAGAAGGGCGGGATGCGCAAGTCGGGGATCGGCC
361 ACGAAACT-AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCAGTC
* * * ** * * * * * *
4925231 GGGTCCCCCTCCACTTGCTACCGATCCTACTGCTGCAACCTTCGATCTGGTTTAATTTTAGACTG
425 GGGTCCCCTTCTACGTGCTGTCGATCCTACTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTG
* * * *
4925296 GGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAA--A-----TGAGCGGGTGGGTACTACGTC
490 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTC
* *
4925353 GGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCACATCTT
555 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTT
* * * *
4925418 TATATTTATGCATGCCAATGCCATTTTAATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
620 CATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* * * **
4925483 CATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTATGG
685 CACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGG
* * *
4925548 TTCGGGATTTTTTAAAATTTTTTCGGAAGGTGTTGT-GCCTCCAAACTTGGTAGACGTGATCCTT
750 TTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCC-CCAAACTTGGTAGACGTGATCCTT
* * *
4925612 GTATTTTTCTTGGTATGCACAAAAAAATTCAGTTAAAAACTCGAAGTGTACAAGATTT
814 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* *
4925670 TGTGACCATTTGAAAAAAGTGTCCCGATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTA
1 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
4925735 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATA
66 AAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * * * **
4925799 TAAGGGTCGAGTACCAACACCCATCGCACATCATGTGCGCACACCCCCCTGACCCCCCCGATCAC
130 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-G-GCCCCCCGATCGT
* * * * ** *
4925864 CGGAACCCCAATGCCGTCGATCAGGTTTTCC-AGCGATGCTTTGGCGATGGTGCCCCGACGAAGA
193 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA-TGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * * * * * *
4925928 AAAATGCAGCACCAGCACATGGCCGAGCCTAGCATGTGCTGTCGCAACCCTTGGTCTGGTCCGAT
257 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGAT
4925993 CTTAGACTGGGAATGAACTCCGTATGC
322 CTTAGACTGGGAATGAACTCCGTATGC
4926020 TTAGACTAGG
Statistics
Matches: 6447, Mismatches: 754, Indels: 508
0.84 0.10 0.07
Matches are distributed among these distances:
862 59 0.01
863 2 0.00
864 88 0.01
865 28 0.00
866 3 0.00
867 6 0.00
868 2 0.00
869 1 0.00
870 789 0.12
871 786 0.12
872 227 0.04
873 62 0.01
874 297 0.05
875 584 0.09
876 324 0.05
877 8 0.00
878 2 0.00
879 7 0.00
880 2 0.00
881 6 0.00
882 1 0.00
883 1 0.00
884 2 0.00
885 11 0.00
886 186 0.03
887 7 0.00
888 110 0.02
889 285 0.04
890 383 0.06
891 571 0.09
892 6 0.00
893 3 0.00
894 2 0.00
895 1 0.00
896 2 0.00
897 5 0.00
898 448 0.07
899 197 0.03
900 93 0.01
901 2 0.00
903 1 0.00
904 2 0.00
905 1 0.00
906 4 0.00
907 69 0.01
909 4 0.00
910 1 0.00
911 2 0.00
912 7 0.00
913 1 0.00
915 2 0.00
918 8 0.00
919 2 0.00
920 1 0.00
921 5 0.00
923 78 0.01
924 2 0.00
925 1 0.00
926 1 0.00
927 1 0.00
929 2 0.00
930 8 0.00
931 464 0.07
932 32 0.00
933 79 0.01
934 1 0.00
936 2 0.00
937 1 0.00
938 2 0.00
939 2 0.00
942 3 0.00
945 2 0.00
946 1 0.00
948 1 0.00
949 2 0.00
950 1 0.00
951 1 0.00
953 3 0.00
954 1 0.00
955 2 0.00
956 8 0.00
957 2 0.00
958 25 0.00
959 10 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (871 bp):
TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
AAATCTCAAATGCTCTTTAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGG
AACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAGAAAAA
TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGCTCCGGTCCGATCTTA
GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGCCGGC
CAGAGGGGCAGGATGCGCAAGCCGGGGATCAGTCGGGTCCCCTTCTACGTGCTGTCGATCCTACT
GCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
CGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTT
TTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTT
Found at i:4922422 original size:26 final size:26
Alignment explanation
Indices: 4922386--4922438 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4922376 CCGGTCCGAT
*
4922386 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4922412 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4922438 C
1 C
4922439 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4923304 original size:26 final size:26
Alignment explanation
Indices: 4923275--4923324 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
4923265 ATCTGATCTA
4923275 AGACTGGGAATGAACTCCGTATGCTT
1 AGACTGGGAATGAACTCCGTATGCTT
*
4923301 AGACTGGGAATGAACTTCGTATGC
1 AGACTGGGAATGAACTCCGTATGC
4923325 CTACGTCAAC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.18, G:0.28, T:0.26
Consensus pattern (26 bp):
AGACTGGGAATGAACTCCGTATGCTT
Found at i:4924233 original size:25 final size:26
Alignment explanation
Indices: 4924170--4924247 Score: 115
Period size: 26 Copynumber: 3.0 Consensus size: 26
4924160 CTGATCCGAT
4924170 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
4924196 CTTAGACTAGGAATGAACATCTG-ATG
1 CTTAGACTGGGAATGAAC-TCCGTATG
4924222 -TTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4924247 C
1 C
4924248 CTAAGTCAAC
Statistics
Matches: 45, Mismatches: 4, Indels: 6
0.82 0.07 0.11
Matches are distributed among these distances:
24 3 0.07
25 19 0.42
26 20 0.44
27 3 0.07
ACGTcount: A:0.29, C:0.18, G:0.26, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4926022 original size:26 final size:26
Alignment explanation
Indices: 4925993--4926045 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4925983 CTGGTCCGAT
*
4925993 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
4926019 CTTAGACTAGGAATTAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4926045 C
1 C
4926046 CTAAGACAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4926186 original size:891 final size:891
Alignment explanation
Indices: 4918019--4926204 Score: 9326
Period size: 891 Copynumber: 9.2 Consensus size: 891
4918009 CCGATCTGAT
* * * * * *
4918019 CTTAGACTGGGAATGAACTACGTACGCCTAAGTCAACCCACAAAACGAGTGTGCGGGCGCACAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
* * * * * * *
4918084 CGGCCAGAGGGG-TGAGATACGCAAGCCGGGGATCCG-TCGAGTCCTCCTCTACGTGTTGCCGAT
66 CGGCCAGAGGGGCAG-GATGCGCAAGCCGGGGATCGGCTCGGGTCC-CCTCTGCGTGCTACCGAT
** ** * * **
4918147 CCTATTGTCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCTATATGCCTAAGCC
129 CCTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
4918212 AACCAACGAAACAAGCG-GGCGGGCGGGCGGACACTACGTCAGCCAGAGAGACGGGATGCACAAG
194 AACCGA-GAAAC-A-CGAGGC-GG-GTG-GG-CACTACGTCGGCCAGAGAGACAGGATGCGCAAG
* * * *
4918276 TCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCCGCATGCCAATGCCAT
252 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCAT
* * **
4918341 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTATGACC-TCACGTGAAGTTTCATGGGAAGGT
317 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
4918405 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTT-AAATTTTTT
381 GACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTT
* * *
4918469 CGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCACAAAA
446 CGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
4918534 AAATTCAGCTAAAAACTCGAAGTGTACAGGTTTTTGTGACCATTTGAAAAAAATGTCCCCATTTC
511 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
4918599 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGTTGTGTG
576 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
4918664 TTCTCGAGGTTTGATGAGGGATA-GGGGCGAATATAAGGGCCAAGTACTAGCACCCATCACACAT
641 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
4918728 CATGTGTGCACGCCCCCCGACCCCCCCGAT--TGCTAGAACCCCAATGCCGCCGGTCAGGTTCTC
706 CATGTGCGCACACCCCCCG-CCCCCCCGATCAT-C-GGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * * *
4918791 CGGTGATGCTCTGACGATGGTACCCC-AGTGAAGAAAAATGTGACACCAGCACATTCCC-AGGCC
768 C-GCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGA-GCC
*
4918854 CAGCATGTGCTGCTACAA----C---CC--T-CGA---T---C------T-AA-TCCG-AT-
830 CAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
4918890 CTTAGACTGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAA-TGAGCGTGCGGGCGCTCCG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACT-AGCGTGCGGGCGCTCAG
* * ** * * *
4918954 CCAGCCAGA-GGGCTGGGATGCGCAAGCCGATGATCAG-TTGGGTCCCCCTCTGCATGCTACCGA
65 CCGGCCAGAGGGGC-AGGATGCGCAAGCCGGGGATCGGCTCGGGT-CCCCTCTGCGTGCTACCGA
* * * * ** * *
4919017 TCCTACTACCGCAACCCTTGGTTTGGTCTAATCTTAGACAAGGAATGAACTCCGTATGCTTGAGC
128 TCCTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * ** *
4919082 CAACAGACGAAATGAGCTGGCAGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCG
193 CAACCGA-GAAA-CA-C--G-A----GGCGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCG
* * * *
4919147 CAAGCCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGAACATCTTCATATTCCTGTGTGCCAATG
248 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
*
4919212 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACC-TCACGTGAAGTTTCATGGGA
313 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CCTTCACGTGAAGTTTCATGGCA
* * * * *
4919276 AGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTT-AAATT
377 AGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATT
* * * *
4919340 TTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTGTTGGCGTGCAC
442 TTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * *
4919404 AAAAAAATTCAGCTAAAAACTC-AGAGTGTATAAGTTTTTGTGACCATTTGAAAAAAATGTCCCC
507 AAAAAAATTCAGCTAAAAACTCGA-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * * *
4919468 ATTTCAGACACTTTAATAGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGTGA
571 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
4919533 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGACAATATAACGGCCAAGTACCAGCACCCATCG
636 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * * *
4919598 CGCATCATGTGCACACACCCCTCGGCCCCTCCGAT-AGT-GGAAACCCCAATGCCGTCGGTCAGG
701 CACATCATGTGCGCACACCCC-CCGCCCCCCCGATCA-TCGG-AACCCCAATGCCGCCGGTCAGG
** ** *
4919661 TTCT-C-C---G----G-CGATGGTGCCCCGGTGAAGAAAAATGTTGCACCAGCACATGGCCGAG
763 TTCTCCGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
** * * * *
4919716 CCCAATATGTGCGGCCGCAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCATATG
828 CCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** * * * *
4919780 CTTAGACTGGGAATGAACTCCTTATTCCTAAGTCAACCCATTAAACAAGCGTGAGAGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
** ** * ** * * * *
4919845 CAACCAGAGGGGTGGGATGAGCAAGCCGAAGAT-TGATCGGGTCCCCTACTGTGTGCTGCCGATC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCT-CTGCGTGCTACCGATC
* * * * * * * * *
4919909 CTACTGCCGCAACCCTTGGTCCGGTCTGATATTACACT-AGATTGAACTTCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
4919973 ACTGATGAAATGAGCGGGAGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
195 ACCGA-GAAA-CA-C--GA----GG-CGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCA
* * *
4920038 AGCCATAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCC
250 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
*
4920103 ATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
315 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * **
4920168 TGACTCGTTTTCTATTTTTCATGATTTTTGAAAGTTTTTACAGTTTGGGATTTTTTAAAATTTTT
380 CGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTT
* * * * *
4920233 TTGGAAGGAGTTTTAGTCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCATAAA
445 TCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
4920298 AAAATTTAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
510 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
4920363 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATGTCAAATGCTCTTTAA-GGGGTGTGA
575 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
4920427 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATACGGGCCAAGTACCAGCACCCATCGCACA
640 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * ** *
4920492 TCATGTGCGCACACCCCTCGGCCCCCCGATTGTCGGAACCCCAACGCCGCCGGTCAGGTTCTCCA
705 TCATGTGCGCACACCCCCCGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-
* * * *
4920557 GTGATGCTCCAACGATGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGC
769 GCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
4920622 ATATGCTACCACAA-CC-C--T-C-G--C--TC-----C---G---G---TCCG-AT-
834 ATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
4920654 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAGCGACGAAACTAGCGTGCGAGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
* * ** * * **
4920719 CGGCTAGAGGGGCAGGATGCACAAGCCGGGGATCGG-TCGGGTCCTTTTTTACGTGCTGTCGATC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCC-CCTCTGCGTGCTACCGATC
* * * *
4920783 TTGCTACCGCAACCCTCGG-CTGATCTGATCTTAGACTGGGAATCAACTCTGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
4920847 ACCGAAGAAACGAGCGGGTGGGCGGGCGGGCACTACGTCGGCTAGAGACACCGGATGCGCAAGCC
195 ACCG-AGAAAC-A-C--G-AGGCGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCC
* **
4920912 GTGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTT
254 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
4920977 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGAC
319 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
4921042 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATAGTTTGGGATTTTTTAAAATTTTTTTGG
384 TCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGG
* * *
4921107 AAGGAGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCATAAAAAAA
449 AAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * *
4921172 TTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAACGTGTCCCCATTTTAGA
514 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
4921237 CACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTTC
579 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
4921301 TTGAGGTTTGATGAGGGATAGGGGGCCAATATACGAGCCAAGTACCAGCACCCATCGCACATCAT
644 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
4921366 GTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAACGCCGTCGGTCAGGTTCTCCGATGA
709 GTGCGCACACCCCCCGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGA
* * * * *
4921431 TGCTCTGACGACGGTGCCCCGACAAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATAT
773 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* *
4921496 GCTACCACAACCCTCGCTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
838 GCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
4921550 C-----CT---AA-G---T-C--A-----AA--C-A---ATGAAACTAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
* * * ** * * **
4921589 CGGCTAGAGGGGCAGGATGCACAAGCCGGGGATCAG-TCGGGTCCTTTTTTACGTGCTGTCGATC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCC-CCTCTGCGTGCTACCGATC
* * * * *
4921653 TTGCTACCGCAACACTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCCAAGCCA
130 CTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
4921718 ACCGGGGAAACGAGCGGGCAGGCGGGTGGGCACTACGTCGGCTAGAGAGACTGGATGTGCAAGCC
195 ACC-GAGAAAC-A-C--G-AGGCGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCC
* *
4921783 GTGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTT
254 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
* * *
4921848 TTATGGCTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTGATGGAAAGACGAC
319 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
4921913 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTTGGGATTTTTTAAAAATTTTTT-G
384 TCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTT-AAAATTTTTTCG
* * * * * *
4921977 GAAGGAGTTTTGGCCCCAAGCCTGGTAGACATGATCCTTATATTTTTGTTGGCATGTACAAAAAA
448 GAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * *
4922042 ATTCAGCTAAAATCTCCAAGTGTACAAGATTTTGTGACCATTCGAAAAAAGTGTCCCAATTTCAG
513 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
4922107 ACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTT
578 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
4922172 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCA
643 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
4922237 TGTGCGCACACCCCCCGACCCCCCCGATCACCGGAACCCCAATGCCGTCGGTCAGGTTCT-C-CG
708 TGTGCGCACACCCCCCG-CCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCG
*
4922300 --G-T-----GATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
772 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * *
4922357 TGCTGCCGCAATCCTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATG
837 TGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
4922412 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
* * * *
4922477 CGGCCAGAGGCGCAGGATGCGCAAGCCGGGGATTGAC-CGGGT-CCC-C--C-T-CTA-C-ATGC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCTCTGCGTGCTACCGATCC
* * *
4922533 TGCCA-C-C-ACCCTCGGTCCGGTCTGATCTTAGACTAGGAATGAACTCC-TATGCCTAAGCCAA
131 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
4922594 CCAACGAAACGAGCAGACGGATGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
196 CCGA-GAAAC-A-C-GA-GG-CGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCG
* *
4922659 TGGATCGATAGGGTGGTAGGTGGATTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
255 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
* * *
4922724 TATGGCTTGTAAATTCATACAATGGTCCATTAAGCCTTCATGTTAAGTTTCATGGCAAGACGACT
320 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * ** * * *
4922789 CATTTTTCTATTTTTTATGATTTTCAAAACTTTTTGCGATTTTGGATTTTTTAAAATTTTTTCAG
385 C-GTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGG
* * * * * *
4922854 AAGAAGTTTTGGCCCCAAAGTTGGTAGCCTTGATCCTTGTATTTTTGTTGGCATTCACAAAAAAA
449 AAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* * * ** *
4922919 TTCAGCTACAAACTCGAGGTCTACAAGATTTTGTGACCATTTGAAAAGCGTTTCCCCATTTCAGA
514 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
4922984 CACTTTAATGGCTACTGGCAGCAAACCTGCAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTC
579 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
4923049 TCGAGGTTTGATGAGGGATAGGGGGCTAATATAGGGGCCAAGTACCAGCACCCATTGCACATCAT
644 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
4923114 GTGCGCACACCCCCCGGCCCCCCGATCATCGAAACCCTAACGCCGCCGGTCAGGTTCTCCGGTGA
709 GTGCGCACACCCCCCGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGA
* * * * * *
4923179 TGCTCCGACGATGGTGCCCCGGCAAAGAAAAATGTGGCACCAGCGCATGCCCGAGCCCAACATAT
773 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* * * *
4923244 GCTACCACAACCCTCGGTCCGATCTGATCTAAGACTGGGAATGAACTCCGTATG
838 GCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
4923298 CTTAGACTGGGAATGAACTTCGTATGCCTACGTCAACCCACGAAACTAGCGTACGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
* * ** * * * * *
4923363 CGACTAGAGGGGTGGGATGCGTAAGTCGAGGATC-GATCGGGTCCCCTTTTGCGTGC--CCTTGA
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCC-TCTGCGTGCTACC--GA
* * * * *
4923425 TCCTGCTGCCACAACCCTCAGTCTGATCTGATCTTAGTCTGGGAATGAACTCCGTATGCCTAAGC
128 TCCTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * *
4923490 CAACCGATGAAACGAGCAGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACCA-GATGTGCAA
193 CAACCGA-GAAAC-A-C--G-AGGCGGGTGGGCACTACGTCGGCCAGAGAGA-CAGGATGCGCAA
*
4923554 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCA
251 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA
* * * *
4923619 TTTTTATGGTTTGTAAATTCATACAATGGTACCTTAAGCCTTCACGTGAAGTTTCATGGAAAGAT
316 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
4923684 GACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTT
381 GACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTT
* * *
4923749 CAGAAGGA-TATTTAGCCCCAAGCCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
446 CGGAAGGAGT-TTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
4923813 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTCTCCCCATTT
510 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
4923878 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
575 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
4923943 GTTCTCGAGGTTTGATG-GAGGATAAGGGGCCAATATAAGGGCCAAGTACTAGCACCCATTGCAG
640 GTTCTCGAGGTTTGATGAG-GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
4924007 ATCATGTGCGCAAACCCCCCGGCCCCCTGATCGTCGGAACCCCAATGCCGCCGGCCAGGTTCTCC
704 ATCATGTGCGCACACCCCCCGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * * * *
4924072 AGAGATGCTCCGGCGATGGTGCCCCAACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCTAA
769 -GCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* *
4924137 CATGTGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
833 CATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACT-C-----C---G-
4924202 CTAGGAATG
888 -T----ATG
* * *
4924211 AACATCTGATGTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCTACGAAACAAGCGTGGG
1 -----C-----TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCG
* * * * * *
4924276 GGCGCTCAGCCTGCCAGAGGGGCGGGTTGCGCAAGTCGGGGATC-GATCGGGTACCCCTCTGTGT
56 GGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGT-CCCCTCTGCGT
** * * * * ** *
4924340 GCTGTCGATCCTACTGCCGCAACCCTCGGTCCGGCCCAATCTTAGACTGGGAATGAACTTCGTAT
120 GCTACCGATCCTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
4924405 GCCGAAGCTAACCGATGAAACGAGCGGGTGGGAGGGCGGGCGGGCGGGCACTACGCCGGCCAGAG
185 GCCTAAGCCAACCGA-GAAAC-A-C------GA-----GGCGGGTGGGCACTACGTCGGCCAGAG
* * * *
4924470 AAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGCCACATCTTCATATTTG
236 AGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTC
* * *
4924535 TGCGTGCCAATGCCATTTTTCTGGGTTGTAAATTCATACAATGGTCCCTTAGGCCTTCACGTGAA
301 TGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAA
* * *
4924600 GTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACT-GTTCGGGA
366 GTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTA-TGGTTTGGGA
* *
4924664 TTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGAAGACGTGATCTTTGTATTTTT
430 TTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* *
4924729 -TTCAGCATGCACAAAAAAATAT-AGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGA
495 GTT-GGCATGCACAAAAAAAT-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
4924792 AAAAAGTGTCCCCATTTTA-AGCACTTTAATGGCTACTGGTAGCACACCTGTAAAATCCCAAATG
558 AAAAAGTGTCCCCATTTCAGA-CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
4924856 CTCTTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
622 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * * *
4924921 ACCAGCACCCATCACACATCATGTGGGCACACCCCCCCGACCGCCTCGATCGTCGAAACCCCAAT
687 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG-CCCCCCCGATCATCGGAACCCCAAT
* * * * * * *
4924986 GTCGCCGTTCATGTTCTCCGGCGATGCTCCGACGATGGTGCCACGATGAAGAAAAATACAGCACC
750 GCCGCCGGTCAGGTTCTCC-GCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACC
* * * * ** * * *
4925051 AGCAGATG-CCGAGCCCAGCATCTACTGTCGTAACCCTCGGTCTGGTCTGATCTTAAACTGGGAA
814 AGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAA
4925115 TGAACTCCGTATG
879 TGAACTCCGTATG
* * *
4925128 CTTAGAATGGGAATGAACTCCGAATGCCTAAGTCAACCCACGAAA-TGAGCATGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACT-AGCGTGCGGGCGCTCAG
* * * * ** *
4925192 CAGGCCAGAAGGGCGGGATGCGCAAGTCGGGGATCGGC-CGGGTCCCCCTCCACTTGCTACCGAT
65 CCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGT-CCCCTCTGCGTGCTACCGAT
* * * * * * * *
4925256 CCTACTGCTGCAACCTTCGATCTGGTTTAATTTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
129 CCTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
4925321 AACCGACAAA-ATGA-GCGGGTGGGTACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGA
194 AACCGAGAAACACGAGGCGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGA
* * * * *
4925384 TCGATAGGGTGGTTGGTGGGTTTAGGCACATCTTTATATTTATGCATGCCAATGCCATTTTAATG
259 TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
*
4925449 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTT
324 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * *
4925514 TTCTATTTTTCACGATTTTCAAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGT
389 TTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGA
* * *
4925579 GTTGT-GCCTCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTTGGTATGCACAAAAAAATTCA
454 GTTTTAGCC-CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
4925643 GTTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCGATTTCAGACACT
518 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
*
4925708 TTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
583 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
4925773 GGTTTGATGAGGGATA-GGGGCCAATATAAGGGTCGAGTACCAACACCCATCGCACATCATGTGC
648 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * *
4925837 GCACACCCCCCTGACCCCCCCGATCACCGGAACCCCAATGCCGTCGATCAGGTTTTCCAGCGATG
713 GCACACCCCCC-G-CCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGATG
** * * * *
4925902 CTTTGGCGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGGCCGAGCCTAGCATGTGC
775 CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * *
4925967 TGTCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
840 TGCCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
4926019 CTTAGACTAGGAATTAACTCCGTATGCCTAAGACAACCCATGAAATTAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
* *
4926084 CGGCCAGAGGGGCAGGATGCGTAAGCCGGGGATCGGCT-GGGTCCCACTCTGTGTGCTACCGATC
66 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCCC-CTCTGCGTGCTACCGATC
* * * * * * *
4926148 CTACTACCGTAACCCAT-GGTCCGGTCCGATCATAGACTGGGAATGAAATCCATATGC
130 CTGCTACCGCAACCC-TCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
4926205 TTAGATTGGG
Statistics
Matches: 6360, Mismatches: 725, Indels: 440
0.85 0.10 0.06
Matches are distributed among these distances:
862 100 0.02
864 53 0.01
865 2 0.00
867 3 0.00
868 2 0.00
869 2 0.00
870 722 0.11
871 608 0.10
872 105 0.02
873 57 0.01
874 321 0.05
875 568 0.09
876 337 0.05
877 6 0.00
878 5 0.00
879 10 0.00
880 5 0.00
881 4 0.00
882 4 0.00
883 2 0.00
884 2 0.00
885 3 0.00
886 189 0.03
887 7 0.00
888 70 0.01
889 287 0.05
890 404 0.06
891 750 0.12
892 9 0.00
893 1 0.00
894 5 0.00
895 10 0.00
896 3 0.00
897 5 0.00
898 482 0.08
899 191 0.03
900 58 0.01
904 2 0.00
906 3 0.00
907 167 0.03
908 1 0.00
909 1 0.00
912 1 0.00
913 3 0.00
917 3 0.00
918 1 0.00
921 1 0.00
923 172 0.03
924 4 0.00
925 1 0.00
926 1 0.00
927 2 0.00
930 4 0.00
931 460 0.07
932 62 0.01
933 79 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACTAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCTCGGGTCCCCTCTGCGTGCTACCGATCC
TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGAGAAACACGAGGCGGGTGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
CTATTTTTCATGATTTTCGAAACTTTTTATGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGT
TTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
CACCCCCCGCCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGA
CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCAC
AACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:4926216 original size:26 final size:26
Alignment explanation
Indices: 4926180--4926230 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
4926170 GGTCCGATCA
4926180 TAGACTGGGAATGAAATCCATATGCT
1 TAGACTGGGAATGAAATCCATATGCT
* * *
4926206 TAGATTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAAATCCATATGC
4926231 CTAAGGTCAA
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.16, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAAATCCATATGCT
Found at i:4926335 original size:186 final size:184
Alignment explanation
Indices: 4925970--4926390 Score: 540
Period size: 186 Copynumber: 2.3 Consensus size: 184
4925960 CATGTGCTGT
* *
4925970 CGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATTA
1 CGCAACCC-TGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGA
** * * * *
4926035 ACTCCGTATGCCTAAGACAACCCATGAAATTAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCAGG
65 ACTCCGTATGCCTAAGACAACCCATGAAACAAGCATACGGGCGCTCAGCCGGCCAGACGGGCAGG
* ** *
4926100 ATGCGTAAGCCGGGGATCGGCTGGGTCCCACTCTGTGTGCTACCGATCCTACTAC
130 ATGCGCAAGCCAAGGATCGGCTGGGTCCCACTCTGCGTGCTACCGATCCTACTAC
* * * * * *
4926155 CGTAACCCATGGTCCGGTCCGATCATAGACTGGGAATGAAATCCATATGCTTAGATTGGGAATGA
1 CGCAACCC-TGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGA
*
4926220 ACTCCGTATGCCTAAGGTCAACCCATGAAACAAGCATACGGGCGCTCAGCCGGCCAGACGGG-AG
65 ACTCCGTATGCCTAA-GACAACCCATGAAACAAGCATACGGGCGCTCAGCCGGCCAGACGGGCA-
* ** * **
4926284 GGATGCGCAAGCCAAGGATTGGCTGGGT-CCACCTCTGCGTGCTGTCGATCCTGCTGT
128 GGATGCGCAAGCCAAGGATCGGCTGGGTCCCA-CTCTGCGTGCTACCGATCCTACTAC
*
4926341 CGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGC
1 CGCAACCCT-GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
4926391 CTAAGCCAAT
Statistics
Matches: 201, Mismatches: 31, Indels: 7
0.84 0.13 0.03
Matches are distributed among these distances:
185 76 0.38
186 125 0.62
ACGTcount: A:0.23, C:0.27, G:0.28, T:0.21
Consensus pattern (184 bp):
CGCAACCCTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAA
CTCCGTATGCCTAAGACAACCCATGAAACAAGCATACGGGCGCTCAGCCGGCCAGACGGGCAGGA
TGCGCAAGCCAAGGATCGGCTGGGTCCCACTCTGCGTGCTACCGATCCTACTAC
Found at i:4930082 original size:865 final size:864
Alignment explanation
Indices: 4926782--4936081 Score: 10554
Period size: 865 Copynumber: 10.7 Consensus size: 864
4926772 TAAAATCTAT
* * *
4926782 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGACAACCGACGAAACGA-------GCGGGCGGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGCGGGCGGG
*
4926840 CGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* *
4926905 TAAGGCACATCTTCATATTTCTACT-TGCCAATGCCTTTTTTATGGCTTGCAAATTCATACAATG
131 TTAGGCACATCTTCATATTTCTA-TGT-CCAATGCCTTTTTTATGGCTTGTAAATTCATACAATG
*
4926969 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTT
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * *
4927034 GAAACTTTTTACGGTTCGGGATTTTTAAAAATTTTTTTTGAAGGAGTTTTGGCCCCAAACTTGGT
259 GAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGT
* *
4927099 AGACGTGATCCTTGTATTCTTTTTGGTATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACA
324 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACA
4927164 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
389 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * *
4927229 CCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTGATGATGGATAAGGGG
454 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
4927294 CCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * * * ** **
4927359 ATCGCCGAAACCGCAATACCGTCAGTCAGGTTCTCCGGCGATTCTCCGATGATGGTGCCCCGGTG
584 ATCGTCGGAACCCCAAT---GTCAGTC-GG---T-CAG-G-TTCTCCGGCGATGGTGCCCCGACG
* ** * * * * * * * *
4927424 ACGAAAAATATGGCACCAGCACATGCTCGAGCCTAGCTTGTGCTGCCATAACCCTTGGTCCGGTC
639 AAGAAAAATGCGGCACCAGCACAT-CTCGAGCCCAGCATGTGCTACTACAACCCTCGATCCTGTC
* * *
4927489 CGATCTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACG----G-G-AT----GCG-T
703 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTT
* ** *
4927543 -----------A--A----G-T---C-A----GGGATCGACCGGGTCCCCCTCTGCGTGCCACTG
768 CAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCG
* * * **
4927582 ATCCTGCTACTGCAACCCTTGGTCTGCTTCAA
833 ATCCTGCTACCGCAACCCTCGGTCTGGTTTGA
*
4927614 TCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGACGGGCGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGG-CGGGCGG
* * * * *
4927679 GCAGGCACTACGCCTGCCAGAGAGACGGGATGCACAAGCCGTAGATCGATAGGGTGGTAGGTGAG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
** * *
4927744 TTTAGGCACATCTTCATATTTCTGCATG-CCAATGCAATTTTTATAGCTTGTAACTTCATACAAT
130 TTTAGGCACATCTTCATATTTCT--ATGTCCAATGCCTTTTTTATGGCTTGTAAATTCATACAAT
* * * *
4927808 GGTGCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTATGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* * * * *
4927873 TGAAA-TGTTTTGTGGTTCAAGATTTTTT-AAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTTG
258 TGAAACT-TTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTG
* ** * * * *
4927936 GTAGACGTGATCCTTGTATTTTTGTTGATAGGCATAAAAAAATTCAGCTAAAAACTCGAAGCGTA
322 GTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTA
*
4928001 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCA
387 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
4928066 AACCTGTAAAACCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTGGATGAGGGATAGGG
452 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
4928131 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATTATGGGTGCACACCCCCCACCCCGCC
517 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT--GTGCGCA-CACCC-CCCGGCC
* * * * * *
4928196 CCCCCGATCATCGGAACTCCAATGCCA-TCAGTCAGGTTCTCCGGCGATGGTGCCCCGGCAAAGA
578 CCCCCGATCGTCGGAACCCCAATGTCAGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGA
* * ** *
4928260 AAAATACGGCACCAGCACATGTCCGAGCCCAGCATGTGCCGCCGTA-ACCCTTGGTCCAGTCCGA
643 AAAATGCGGCACCAGCACATCT-CGAGCCCAGCATGTG-CTAC-TACA-AC-----CC--T-CGA
* *
4928324 TCTTAGACTGGGAATGAACTCTATAAGCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACC
696 TC-----CT--G--T---CT-GAT---CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * ** * * * *
4928389 CACGAAACGAGCATGAGGGCATTCAATCAGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGGTC
745 CACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGATCGATC
* * * * *
4928454 GGGTCCCCCTCTGTGTGCTGCCGATCTTGCTACCACAACCCTCGATC-GAGTCT-A
810 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTG-GTTTGA
* * * * *
4928508 TTCTTAGATTGGGAATGAACTCCGTATGCCTAAGGCAACCGACGAAACGAGCGGGCGGGCGGACG
1 -TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGC-GGCGGGCG
* *
4928573 GGCGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGG
64 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* **
4928638 GTTTAGGCACATCTTCATATTTCTACGATCCAACACCTTTTTTATGGCTTGTAAATTCATACAAT
129 GTTTAGGCACATCTTCATATTTCTATG-TCCAATGCCTTTTTTATGGCTTGTAAATTCATACAAT
*
4928703 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* * * *
4928768 TAAAACTTTTTGTGGTTCGAGATTTTTTAAAAATTTTTTGGAAAGAGTTTTGGCCCCAAACTTGG
258 TGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGG
* ** * *
4928833 TAGACGTGATCCTTGTGTTTTTTTTGGCATGGTCAAAACAATTCAGCTAAAAACTCGAACTGAAC
323 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAC
*
4928898 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGCTACTGGCAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* *
4928963 ACCTGTAAAATCTCAAATGTTCTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * **
4929028 GCCAATATAAGGGCAAAGTACCAGCACCCATCGTACATCATGTGCACACACCCCCCAGCCCCTTC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCC
* *
4929093 GATCGTCGGAACCCCAATGTC-GCCGGTCAGGTTCCCCGGCGATGGTGCCCCGACGAAGAAAAAT
583 GATCGTCGGAACCCCAATGTCAGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAAT
* * *
4929157 GTGGCACCAGCACATCTCGAGCCCAGAATGTGCTACTGCAACCCTCGATCCTGTCTGATCTTAGA
648 GCGGCACCAGCACATCTCGAGCCCAGCATGTGCTACTACAACCCTCGATCCTGTCTGATCTTAGA
* * *
4929222 CTGGAAATGAACTCTGTACGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCA
713 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCA
* * * * * * *
4929287 GAGGAGTGGGATCCATAAGTCGGGGATCGGTCGGGTCCTCCTCTGCGTGCTGCCGATCCTACTGC
778 GAGGAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTAC
4929352 CGCAACCCTCGGTCTGGTTTGA
843 CGCAACCCTCGGTCTGGTTTGA
* * * * *
4929374 TCTTAGACTGGGAATGAACTCTGTATGCCTAACCCAACTGATGAAATGAGCGGGTGGTGGGCGGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGCGGGCGGG
* * * * * * *
4929439 CAGGCACTACGCCAGCTAGAGAGGCGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGCTGGGC
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * * *
4929504 TAAGGTACATCTTCATATTTCTATGTACCATTGCCTTTTTTATGGCTTGTACATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTATGT-CCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGG
*
4929569 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTG
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
*
4929634 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGTA
260 AAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGTA
4929699 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
325 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
4929764 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
*
4929829 CTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGG
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGG
* * * * *
4929894 CCAATATAAGGGCAAAGTACCAGCACCCATCGTACATCATGTGCACACACCCCCCAGCCCCCTCG
519 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* *
4929959 ATCGTCGGAACCCCAATGTC-GTCGGTCAGGTTCCCCGGTGATGGTGCCCCGACGAAGAAAAATG
584 ATCGTCGGAACCCCAATGTCAGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
* *
4930023 TGGCACCAGCACATCTCGAGCCCAGAATGTGCTACTACAACCCTCGATCCTGTCTGATCTTAGAC
649 CGGCACCAGCACATCTCGAGCCCAGCATGTGCTACTACAACCCTCGATCCTGTCTGATCTTAGAC
* * *
4930088 TGGAAATGAACTCTGTACGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAG
714 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAG
* * * *
4930153 AGGAGTGGGATGCACAAGTCGGGGATCGATCGGGTCCTCCTCTGCGTGCTGCCGATCCTACTGCC
779 AGGAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACC
4930218 GCAACCCTCGGTCTGGTTTGA
844 GCAACCCTCGGTCTGGTTTGA
* * * * * *
4930239 TCTTAGACTGGGAATGAACTATGTATGCCTAACCCAACTGATGAAATGAGCGGGTGGTGGGCGGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGCGGGCGGG
* * * * *
4930304 CAGGCACTACGCCAGCTAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGCTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4930369 TTAGGTACATCTTCATATTTCTATGTACCATTGCCTTTTTTATGGCTTGTACATTCATACAATGG
131 TTAGGCACATCTTCATATTTCTATGT-CCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGG
*
4930434 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGATTTTTG
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTG
*
4930499 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGTA
260 AAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGTA
*
4930564 GATGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
325 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAA
4930629 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
390 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * *
4930694 CTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTCGAGGTTTGATGATGGATAAGGGGC
455 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
4930759 CAATATAAGGGCAAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCGCCCCG
520 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCG
* ** * * **
4930824 ATCGTCGAAACCGTAATACCGTCAGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGTG
584 ATCGTCGGAACCCCAAT---GTCAGTC-GG---TCAGGT--T-CTCCGGCGATGGTGCCCCGACG
** * * * * * * * * * * *
4930889 ACA-AAAAATATGGCACCAGCACCTGCCCGAGCCTAGCTTGTGCTGCCATAATCCTTGGTCCGGT
639 A-AGAAAAATGCGGCACCAGCACAT-CTCGAGCCCAGCATGTGCTACTACAACCCTCGATCCTGT
* * *
4930953 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACG----G-G-AT----GCG-
702 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGT
* ** *
4931007 T-----------A--AGT----T-----A----GGGATCGATCGGGGCCCCCTCTGCGTGCCACT
767 TCAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCC
* * * **
4931046 GATCCTACTACTGCAACCCTTGGTCTGGTTCAA
832 GATCCTGCTACCGCAACCCTCGGTCTGGTTTGA
* * *
4931079 TCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAATCGATGAAACGAGCGAGCGGACGGGCGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGG-CGGGCGG
* * * *
4931144 GCGGGCACTACGCCTGCCAGAGAGACGGGATGCACAAGCCGTAGATCGATAGGGTGGTAGGTGAG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
** * * *
4931209 TTTAGGCACATCTTCATATTTCTGCATG-CCAATGCAATTTTTATGGCTTGTAACTTTATAAAAT
130 TTTAGGCACATCTTCATATTTCT--ATGTCCAATGCCTTTTTTATGGCTTGTAAATTCATACAAT
* * * *
4931273 GGTGCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTATGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* * * *
4931338 TGAAA-TGTTTTGTGGTTCGGGATTTTTTAAAA-TTTTTTTGCAAGGAGTTTTGGCCCTAAACTT
258 TGAAACT-TTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTG-AAAGAGTTTTGGCCCCAAACTT
* ** * * *
4931401 GGTAGACGTGATCCTTGTATTTTTGTTGATAGGCA-TAAACAAATTCAGCTAAAAACTCGAAGCG
321 GGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAC-AATTCAGCTAAAAACTCGAAGTG
*
4931465 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAG
385 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* * *
4931530 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGAGTGTGAGTTCTTGAGGTTGGATGAGGGATAG
450 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* * * *
4931595 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATTATGGGTGCACACCCCCCACCCCG
515 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT--GTGCGCA-CACCC-CCCGG
* * * * * *
4931660 CCCCCCCGATCGTCGGAACTCCAATGCCA-CCAGTCAGGTTCTCCGGCGATGGTGCCCTGACAAA
576 CCCCCCCGATCGTCGGAACCCCAATGTCAGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAA
* *
4931724 GAAAAATGCGGCACCAGCACATGTCCGAGCCCAGCATGTGCTACCGTA-ACCCTTGGTCCAGTCC
641 GAAAAATGCGGCACCAGCACATCT-CGAGCCCAGCATGTGCTA-C-TACA-AC-----CC--T-C
* *
4931788 GATCTTAGACTAGGAATGAACTCTGTATGCTTAGATTGGGAATGAAGTCCGTATGCCTAAGTCAA
694 GATC-----C------TG---TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * ** * * * *
4931853 CCCACGAAACGAGCATGAGGGCACTCAACCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGG
743 CCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGATCGA
* * * *
4931918 TCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTACCACAACCCTCGGTCGGGTCT-A
808 TCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGGTTTGA
* * *
4931974 TTCTTAGACTGGGAATGAACTCCGTATGCCTAAGGCAACCGACGAAACGAGCGGGCGGGCGGGCG
1 -TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGC-GGCGGGCG
* * *
4932039 GGCAGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGG
64 GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
**
4932104 GTTTAGGCACATCTTCATATTTCTATGTGCCAACACCTTTTTTATGGCTTGTAAATTCATACAAT
129 GTTTAGGCACATCTTCATATTTCTATGT-CCAATGCCTTTTTTATGGCTTGTAAATTCATACAAT
* *
4932169 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCCAGACGACTCGTTTTCTATTTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTT
* * * *
4932234 TAAAACTTTTTGTGG-TCGAGATTTTTTAAAA-ATTTTTTGGAAGAGTTTTGGCCCCAAACTTGG
258 TGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGG
* *
4932297 TAGACGTGATCCTTGTATTTTTTTTGGCATGCTCAAAACAATTCAGCTAAAAACTCGAAGTGAAC
323 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAC
* *
4932362 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGGCACTTTAATGGCTACTGTGCAGCA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG-GCAGCA
4932427 AACCTGTAAAATCTCAAATGCTCTTTAA-GGGGT-TGAGTTCTCGA-GTTTGATGAGGGATAGGG
452 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * * *
4932489 GG-CAATATAAGGGCAAAGTACCAGCA-CCATCGCACATCATGTGCACACACCCCCCAGCCCCCT
517 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC
* * *
4932552 TGATCGTCGGAACCCCAATGTCGCCAGTCAGGTTCCCCGGCGATGCTCCGGCGATGGTGCCCCGA
582 CGATCGTCGGAACCCCAATGT---CAGTC-GG-T---CAG-G-TTCTCCGGCGATGGTGCCCCGA
* * * * *
4932617 CGAAGAAAAATGTGGCACCAGCACATCTTGAGCCCAGAATGTGCTACTGCAACCCTCGGTCCTGT
637 CGAAGAAAAATGCGGCACCAGCACATCTCGAGCCCAGCATGTGCTACTACAACCCTCGATCCTGT
* * * * *
4932682 CTGATCTTAGACTGGAAATGAACTCTGTACGCCTAAGTCAACCCACAAAACGAGCGTGCGGACGT
702 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGT
* * * *
4932747 TCAGCCGGCCAGAGGAGTAGGATGCACAAGTCGGGGATCGGTCGGGTCCTCCTCTGCGTGCTGCC
767 TCAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCC
* *
4932812 GATCCTACTTCCGCAACCCTCGGTCTGGTTTGA
832 GATCCTGCTACCGCAACCCTCGGTCTGGTTTGA
* *
4932845 TCTTAGACTGGGAATGAACT-TCGTATGCCTAAGACAACCGACGAAACGAGCGGACGAACGGGCG
1 TCTTAGACTGGGAATGAACTCT-GTATGCCTAAGCCAACCGATGAAACGAGCGG--G--C-GGCG
* *
4932909 GGCGGGCGGGCACTACTCCGGCCAGAGAGACGGGATGCGCAAGCCGTTGATCGATAGGGTGGTAG
60 GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* * * *
4932974 CTGGGTTAAGGCACATCTTCATATTTCTACGTGCCAATGCCTTTTTTATGGCTTGTATATTCATA
125 GTGGGTTTAGGCACATCTTCATATTTCTATGT-CCAATGCCTTTTTTATGGCTTGTAAATTCATA
* *
4933039 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGA
189 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
*
4933104 TTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAAC
254 TTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAAC
*
4933169 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTTAGCTAAAAACTCGAAGT
319 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGT
4933234 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
384 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
4933299 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGATGGATA
449 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
4933364 AGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
514 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC
* * * * *
4933429 CCCCCGATCATCGAAACCGCAAT-ACTGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTAC
578 CCCCCGATCGTCGGAACCCCAATGTCAGTCGGTCAGGTTCTCCGGCGA---T--G--G-T-G--C
** * * * *** * *
4933493 CCCGGTGACGAAAAATGCGGCACCAGCACATGTCCGAGCCTAGCATGTGCTACCGTAACCCTTGG
632 CCCGACGAAGAAAAATGCGGCACCAGCACATCT-CGAGCCCAGCATGTGCTACTACAACCCTCGA
* * *
4933558 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAACTCAACCCACG--A-GA---T--
696 TCCTGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGC
*
4933615 --GCG-T-----------A--A----G-T---C-A----GGGATCGACCGGGTCCCCCTCTGCGT
761 GGGCGTTCAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
** * * **
4933651 GCCACTGATCCTGCTACTGCAACCCAT-GGTCTGGTTCAA
826 GCTGCCGATCCTGCTACCGCAACCC-TCGGTCTGGTTTGA
** * * *
4933690 TCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACAGATGAAATGA-----------ACGGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGCGGGCGGG
* * * * *
4933744 CGGGTACTACGCCTGCCAGAGAGACGGGATGCACAAGCCGTAGATCGATAGGGTGGTAGGTCGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4933809 TTAGGCACATCTTCATATTTCTGCATG-CCAATGCCATTTTTATGGCTAGTAACTTCATACAATG
131 TTAGGCACATCTTCATATTTCT--ATGTCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATG
* * * * *
4933873 GTGCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTTACGATTTTC
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * * * *
4933938 GAAA-TGTTTTGTGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTTGG
259 GAAACT-TTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGG
* * * * *
4934002 TAGACGTGATCCTTGTATTTTTTTTGACAGGCATAAAAAAATTCAGCTAAAAACTCGAAGCGTAC
323 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAC
*
4934067 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * *
4934132 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTTGAGGTTGGATGAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
**
4934197 GCCAATATAAGGGCCAAGTACCAGCACCCATCATACATCATGTGCGCACACCCCCCCGGCCCCCC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
* * * * *** *
4934262 CGATCGCCCGAACCCCAATCCTACCAATCAGGTTTTTC-GGTGATGCTCCATTGATGGTGCCTCG
582 CGATCGTCGGAACCCCAAT-GT--CAGTC-GG----TCAGGT--T-CTCCGGCGATGGTGCCCCG
* * * * * * *
4934326 GCAAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGCATGTGCTGTCGTA-ACCCTCGGTCT
636 ACGAAGAAAAATGCGGCACCAGCACAT-CTCGAGCCCAGCATGTGCT-AC-TACA-AC-C---C-
4934390 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
692 --T-CGATC-----CT--G--T---CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * * * *
4934455 GTCAACCCACGAAACGAGCGTGCGAGTGTTCAGCCGACCAGCAGG-GCGGGATACATAA-CCGGG
738 GTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAG-AGGAGTGGGATGCACAAGCCGGG
* * * * * * * * ** *
4934518 GATCGGT-GGGTCCCCCTCTACGTGCTGCCGATCTTGCTGCCACAACCATTGGTCTTGTGCGG
802 GATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGGTTTGA
* * *
4934580 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-GGCGGGCGAG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGCGGGCGGG
4934642 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
66 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
4934707 TTAGGCACATCTTCATATTTCTGCATG-CCAATGCCATTTTTATGGGTTGTAAATTCATACAACG
131 TTAGGCACATCTTCATATTTCT--ATGTCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATG
* *
4934771 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTGTTTTTCATGATTTTT
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * *
4934836 GAAACTTTTTGCGGTTCGGGATTTTTTAAAA-ATTTTTTGAAAGGAGTTTTGGTCCCAAACTTGG
259 GAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAA-GAGTTTTGGCCCCAAACTTGG
* * * *
4934900 TAGACATGATCCTTGTATTTTTTTTGGCTTGCACAAAAAAAGTCAGCTAAAAACTCGAAGTGTAC
323 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAC
*
4934965 AAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
4935030 ACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
4935095 GCCAATATAAAGGCCAAGTACCAGCACCCATCGTACATCATGTGCGCACACCCCCCCGGCTCCCC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
* * **
4935160 CGATCGTCGGAACCCCAATGGCATCGGTTAGGTTCTCCAGCGTTGCTCCGGCGATGGTGCTTCGA
582 CGATCGTCGGAACCCCAAT-G--TCAG-TCGG---T-CAG-GTT-CTCCGGCGATGGTGCCCCGA
* * * * * * **
4935225 CGAAGAAAAATGCGGCACCAGCTCATGCCCGAGCTCAGCTTGTGCTGTCGCCACCCTCGGTCCGG
637 CGAAGAAAAATGCGGCACCAGCACAT-CTCGAGCCCAGCATGTGC--T-ACTA-CAAC---CC--
4935290 TCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
692 T-CGATC-----C------TG---TCTG-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * * * * *
4935355 CAACCTACGAAATGAACGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGCACAAGCCAGGGAT
740 CAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGAGGAGTGGGATGCACAAGCCGGGGAT
* * * * * *
4935420 CAACCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCACAACCCTCGGTCTGGTGTGA
805 CGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGGTTTGA
*
4935480 TCTGAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGCGG
1 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGC-GGCGGGCGG
* * * * * *
4935545 GCGGTCACTATGCCGACCAGAGAGATGGGATGCGAAAGCCGTGGATCGATAGGGTGGTTGGTGGG
65 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * **
4935610 TTTAGACACATCTTCATATTTCTGTGTGCCAATGCGATTTTTATGGCTTGTAAATTCATACAATG
130 TTTAGGCACATCTTCATATTTCTATGT-CCAATGCCTTTTTTATGGCTTGTAAATTCATACAATG
* * * * * *
4935675 GTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGAATCGTTTTCAATCTTTCACGATTCTT
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTT
* * ** * * * *
4935740 GAAACTTTTTACGGTTC-AGGAGTTTTTAAAATTTTTTCAGAAGGTGTTTTCGCCCCAAACTTTG
259 GAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGG
* * *
4935804 TAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTAC
323 TAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTAC
* * * * *
4935869 AAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTTATACACTTTAATGCCTACTGGCAGTAA
388 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
4935934 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
453 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
4935999 G-CAACATAAGGGCCAAGTACCAGCACCCATCGCATATGATGTGCGCACACCCCCCCGGCCCCCC
518 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCC
* *
4936063 CGATCGCCAGAACCCCAAT
582 CGATCGTCGGAACCCCAAT
4936082 CCTACCTGTA
Statistics
Matches: 7342, Mismatches: 774, Indels: 633
0.84 0.09 0.07
Matches are distributed among these distances:
828 1 0.00
829 534 0.07
830 2 0.00
831 5 0.00
832 103 0.01
833 59 0.01
834 9 0.00
835 4 0.00
836 5 0.00
837 4 0.00
838 4 0.00
839 265 0.04
840 329 0.04
841 449 0.06
842 9 0.00
843 39 0.01
844 27 0.00
845 94 0.01
846 2 0.00
847 1 0.00
848 2 0.00
849 3 0.00
850 1 0.00
851 2 0.00
853 5 0.00
854 5 0.00
855 44 0.01
857 4 0.00
858 45 0.01
859 39 0.01
860 1 0.00
861 1 0.00
862 1 0.00
863 3 0.00
864 480 0.07
865 1060 0.14
866 4 0.00
867 3 0.00
868 7 0.00
869 8 0.00
870 196 0.03
871 6 0.00
872 11 0.00
873 7 0.00
874 209 0.03
875 55 0.01
876 194 0.03
877 87 0.01
878 20 0.00
879 25 0.00
880 24 0.00
881 63 0.01
882 72 0.01
883 3 0.00
884 3 0.00
886 32 0.00
887 7 0.00
888 8 0.00
889 7 0.00
890 103 0.01
891 46 0.01
892 99 0.01
893 16 0.00
894 146 0.02
895 365 0.05
896 554 0.08
897 62 0.01
898 643 0.09
899 13 0.00
900 105 0.01
902 6 0.00
903 76 0.01
904 409 0.06
905 7 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (864 bp):
TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGCGGGCGGG
CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
TTAGGCACATCTTCATATTTCTATGTCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGA
AACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTTTTGGCATGCACAAAACAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
CGTCGGAACCCCAATGTCAGTCGGTCAGGTTCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
GCACCAGCACATCTCGAGCCCAGCATGTGCTACTACAACCCTCGATCCTGTCTGATCTTAGACTG
GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGCCGGCCAGAG
GAGTGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGC
AACCCTCGGTCTGGTTTGA
Found at i:4931829 original size:26 final size:26
Alignment explanation
Indices: 4931791--4931843 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
4931781 CCAGTCCGAT
*
4931791 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* * *
4931817 CTTAGATTGGGAATGAAGTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4931843 C
1 C
4931844 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.15, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4934427 original size:26 final size:26
Alignment explanation
Indices: 4934398--4934450 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4934388 CTGATCCGAT
4934398 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4934424 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4934450 C
1 C
4934451 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4935332 original size:26 final size:26
Alignment explanation
Indices: 4935296--4935348 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4935286 CCGGTCCGAT
*
4935296 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4935322 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4935348 C
1 C
4935349 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4936230 original size:10 final size:10
Alignment explanation
Indices: 4936215--4936354 Score: 64
Period size: 10 Copynumber: 13.9 Consensus size: 10
4936205 TTTATGTATT
4936215 TTATTATTTA
1 TTATTATTTA
4936225 TTATTATTATA
1 TTATTATT-TA
4936236 TGTA-TATTT-
1 T-TATTATTTA
4936245 TTACTTATTTA
1 TTA-TTATTTA
4936256 -T-TTATTT-
1 TTATTATTTA
* *
4936263 TTTTTCTGTTA
1 TTATTAT-TTA
*
4936274 ATATTTATATGTA
1 TTA-TTAT-T-TA
4936287 TT-TTATTTA
1 TTATTATTTA
* *
4936296 TATAGTTCTATA
1 T-TA-TTATTTA
*
4936308 TTTATTATATA
1 -TTATTATTTA
*
4936319 TTATAATTTA
1 TTATTATTTA
4936329 -T-TTA-TTA
1 TTATTATTTA
4936336 TTATTATTTA
1 TTATTATTTA
4936346 TTATTATTT
1 TTATTATTT
4936355 TTCTTGTAAT
Statistics
Matches: 100, Mismatches: 12, Indels: 36
0.68 0.08 0.24
Matches are distributed among these distances:
7 3 0.03
8 12 0.12
9 11 0.11
10 39 0.39
11 18 0.18
12 13 0.13
13 4 0.04
ACGTcount: A:0.29, C:0.02, G:0.03, T:0.66
Consensus pattern (10 bp):
TTATTATTTA
Found at i:4936237 original size:27 final size:27
Alignment explanation
Indices: 4936202--4936253 Score: 70
Period size: 27 Copynumber: 1.9 Consensus size: 27
4936192 TTTTCTTTTG
* *
4936202 TATTTTATGTAT-TTTATTATTTATTAT
1 TATTATATGTATATTT-TTACTTATTAT
4936229 TATTATATGTATATTTTTACTTATT
1 TATTATATGTATATTTTTACTTATT
4936254 TATTTATTTT
Statistics
Matches: 22, Mismatches: 2, Indels: 2
0.85 0.08 0.08
Matches are distributed among these distances:
27 19 0.86
28 3 0.14
ACGTcount: A:0.27, C:0.02, G:0.04, T:0.67
Consensus pattern (27 bp):
TATTATATGTATATTTTTACTTATTAT
Found at i:4936243 original size:21 final size:20
Alignment explanation
Indices: 4936219--4936346 Score: 61
Period size: 21 Copynumber: 6.0 Consensus size: 20
4936209 TGTATTTTAT
4936219 TATTTATTATTATTATATGTA
1 TATTTATTATTATTATAT-TA
4936240 TATTT-TTACTTATT-TATT-
1 TATTTATTA-TTATTATATTA
* * *
4936258 TATTTTTTTTCTGTTAATATTTA
1 TATTTATTAT-TATT-ATA-TTA
*
4936281 TATGTATT-TTATTTATATAGTTCTA
1 TATTTATTATTA--T-TATA--T-TA
4936306 TATTTATTATATATTATAATT-
1 TATTTATTAT-TATTAT-ATTA
4936327 TATTTATTATTATTAT-TTA
1 TATTTATTATTATTATATTA
4936346 T
1 T
4936347 TATTATTTTT
Statistics
Matches: 85, Mismatches: 6, Indels: 34
0.68 0.05 0.27
Matches are distributed among these distances:
18 8 0.09
19 7 0.08
20 12 0.14
21 23 0.27
22 4 0.05
23 11 0.13
24 6 0.07
25 11 0.13
26 1 0.01
27 2 0.02
ACGTcount: A:0.29, C:0.02, G:0.03, T:0.66
Consensus pattern (20 bp):
TATTTATTATTATTATATTA
Found at i:4936958 original size:11 final size:11
Alignment explanation
Indices: 4936928--4936966 Score: 51
Period size: 11 Copynumber: 3.5 Consensus size: 11
4936918 CCCAGAAACG
*
4936928 GGTGACCTTCC
1 GGTGAACTTCC
* *
4936939 GGCGAACTTTC
1 GGTGAACTTCC
4936950 GGTGAACTTCC
1 GGTGAACTTCC
4936961 GGTGAA
1 GGTGAA
4936967 AAAACCCAGA
Statistics
Matches: 23, Mismatches: 5, Indels: 0
0.82 0.18 0.00
Matches are distributed among these distances:
11 23 1.00
ACGTcount: A:0.18, C:0.26, G:0.31, T:0.26
Consensus pattern (11 bp):
GGTGAACTTCC
Found at i:4937470 original size:17 final size:17
Alignment explanation
Indices: 4937450--4937489 Score: 50
Period size: 14 Copynumber: 2.5 Consensus size: 17
4937440 TTTGTTTTAC
*
4937450 TTTTCTTTATTTTTCTA
1 TTTTCTTTATTATTCTA
4937467 --TT-TTTATTATTCTA
1 TTTTCTTTATTATTCTA
4937481 TTTTCTTTA
1 TTTTCTTTA
4937490 AATAAAAATC
Statistics
Matches: 19, Mismatches: 1, Indels: 6
0.73 0.04 0.23
Matches are distributed among these distances:
14 11 0.58
15 2 0.11
16 2 0.11
17 4 0.21
ACGTcount: A:0.15, C:0.10, G:0.00, T:0.75
Consensus pattern (17 bp):
TTTTCTTTATTATTCTA
Found at i:4937474 original size:14 final size:14
Alignment explanation
Indices: 4937455--4937484 Score: 51
Period size: 14 Copynumber: 2.1 Consensus size: 14
4937445 TTTACTTTTC
*
4937455 TTTATTTTTCTATT
1 TTTATTATTCTATT
4937469 TTTATTATTCTATT
1 TTTATTATTCTATT
4937483 TT
1 TT
4937485 CTTTAAATAA
Statistics
Matches: 15, Mismatches: 1, Indels: 0
0.94 0.06 0.00
Matches are distributed among these distances:
14 15 1.00
ACGTcount: A:0.17, C:0.07, G:0.00, T:0.77
Consensus pattern (14 bp):
TTTATTATTCTATT
Found at i:4937640 original size:58 final size:59
Alignment explanation
Indices: 4937492--4937641 Score: 198
Period size: 58 Copynumber: 2.5 Consensus size: 59
4937482 TTTCTTTAAA
* *
4937492 TAAAAATCAAAATTTCCAAAAAAAATATTTTTAGGGAAAAGTTGAAAGTATCAATTTTCTT
1 TAAAAAT--AAATTTCCAAAAAAAGTATTTTGAGGGAAAAGTTGAAAGTATCAATTTTCTT
** *
4937553 TAAAAATAAATTTTGAAAAAAGGGT-TTTTGA-GGAAAAGTTGAAAGTATCAATTTT-TCT
1 TAAAAATAAATTTCCAAAAAA-AGTATTTTGAGGGAAAAGTTGAAAGTATCAATTTTCT-T
4937611 TAAAAATAAATTTCCAAAAAAAGTATTTTGA
1 TAAAAATAAATTTCCAAAAAAAGTATTTTGA
4937642 TTCTTTCCTT
Statistics
Matches: 78, Mismatches: 8, Indels: 9
0.82 0.08 0.09
Matches are distributed among these distances:
57 3 0.04
58 50 0.64
59 17 0.22
60 1 0.01
61 7 0.09
ACGTcount: A:0.47, C:0.06, G:0.12, T:0.35
Consensus pattern (59 bp):
TAAAAATAAATTTCCAAAAAAAGTATTTTGAGGGAAAAGTTGAAAGTATCAATTTTCTT
Found at i:4938247 original size:26 final size:26
Alignment explanation
Indices: 4938218--4938270 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4938208 CCAATCCGAT
*
4938218 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4938244 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4938270 C
1 C
4938271 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4940016 original size:26 final size:26
Alignment explanation
Indices: 4939987--4940039 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4939977 CCGGTCTGAT
*
4939987 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4940013 CTTAGACTGGGAATAAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
4940039 C
1 C
4940040 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:4940917 original size:26 final size:26
Alignment explanation
Indices: 4940881--4940933 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4940871 CCGATCTGAT
*
4940881 CTTAGACTGGGAATGAACTCGGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4940907 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4940933 C
1 C
4940934 CTAAGTCGAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4941275 original size:894 final size:891
Alignment explanation
Indices: 4938105--4949643 Score: 13509
Period size: 894 Copynumber: 13.0 Consensus size: 891
4938095 TACGACACTA
* * ** * ** *
4938105 CCGGACAGGTTCTTCGGCGATGCTCCGATGATGGTGCCCCGATGAAGAAAAATACGGCACCAGCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* * ** * *
4938170 CATGCCCGATCCCAGCATGTGCTACCGTAACCCTCGGTCCAATCCGATCTTAGACTGGGAATTAA
66 CATG-CCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAA
*
4938235 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGG
130 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
* * * * ** ** * *
4938300 GCACTCAGTCGACCAGAGGGGCAGGATGCATAAGCTAGGGATC-ACCGAGTCCCCCTCTGCGTGC
195 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
* * * * *
4938364 TGCCGATCATGCTGCCGCAACCCTCGGTCTGGTCTGAT-TTCAGACTAGGAATGAACTCTGTATG
260 TGCCGATCCTGCT-ACGCAACCCTCAGTCTGGTCTGATCTT-AGACTGGGAATGAACTCCGTATG
* ** * * *
4938428 -CTGAAGCCAATCGATAAAACGAGCGGGCGGGTGGGCGGGCAGGCACTATGTCGGCCAGAGAGAC
323 CCT-AAGCCAACCGA-CGAA--A-CGGGC----GGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
*
4938492 GGGATGCGCAAGCCGTGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
379 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
* *
4938557 TGCCAATGCCATTTTTATTGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTG-AGTTT
444 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * * **
4938621 CATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTACGGTTCAGGATTTTT
509 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTT
* * *
4938686 TAGAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
573 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* * *
4938751 CATGCACAAAACAATTCAGCTAAAAACTCAAAGTGTACGAGATTTTGTGACCATTTGAAAAAAGT
638 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
*
4938816 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAA
703 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
*
4938881 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCAC
768 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * * *
4938946 CCATTGCACATCATGTGTGCACACCCCCCGGCCCCCCCGATCGTCAGAACCCTAATGCCG
833 CCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCG
* * * * * *
4939006 TCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCAGCACCAGTA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
** ** *
4939071 CATGCCCGAGCATAGCATGTGCTGCCGTAACCCTCAGTCC-AGTCCGATCTTAGACTGGGAATGA
66 CATG-CCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGA
* *
4939135 ACTCCATACGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCG
129 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCG
* * * * * * ** * **
4939200 GGCACTCAGTCGGCCAAAGGGGTGGGATGCGCAAGCTGAGGATCGGCCGAGTCCCCCTCTATGTG
194 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
** * * * * *
4939265 CTATCAATCCTGCTACCGTAACCCTCATTC-GAT-TAATCTTAGACT-GGAATGAACTCCGTATG
259 CTGCCGATCCTGCTA-CGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
** ** * * *
4939327 CCTAAG-CAACCGACTGATGCGGG-GCGGCAAGC--GCA-TACGTCGGCC-G-G-GGCGGGA-GT
323 CCTAAGCCAACCGAC-GAAACGGGCG-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGC
* *
4939383 GCAAG-CATGGATCGATTGCGGT-G-A-GTGGGTTTAGGCACAT-TTCATA-TTCTGCATG-CAA
386 GCAAGCCGTGGATCGATAG-GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
*
4939441 TGCC-TTTTTATGGCTTGTAAATTCATGC--TGGTCCCTTAAG-CTTCACGTGAAGTTTCATAGG
450 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT-GG
* * * *
4939502 CAAGTCGAC-CG--TTCTATTTTTCATGATTTTTGAAACTTTTTAC-G--T-GGATTTTTAAAAT
514 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGATTTTTAAAAT
** * * * * *
4939560 TTTTTCAGAACGGAG-TTTGGCCCCAAACTT-GTAGA--TGATCC-TCTACTTATTTTGGTATGT
579 TTTTTTGGAA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
* *
4939620 ACAAAAAAATTAAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
643 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* *
4939685 CATTTCAGACACTTTAAAGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
708 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * * ** *
4939750 AGTTAGTGCTTAAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
773 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * *
4939815 GCACATCATGTACGCACACAGCCCCCCGACCCCCTCGATCGCTGGAACCCCAATGCCG
838 GCACATCATGT--GCGCACA-CCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCCG
** * * * *
4939873 CCGGTCAGGTTCTCCGGGCGAAGCTCCGACGATGGTGCCTCGGTGAAGAAAAATACGGCACCAGC
1 CCGGTCAGGTTCTCC-GATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGC
* * * * *
4939938 ACATGCACGAGTCCAGCATGTACTGTCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGA
65 ACATGC-CGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGA
* * *
4940003 ACTCCGTATGCTTAGACTGGGAATAAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCATGCG
129 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCG
* ** * * * *
4940068 GGCGCTCTGCCAACTAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTCGGTTCCCCCTCTGCGTG
194 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
* * * * * ** * **
4940133 TTGCCAATCCTACTGCTGTAACCCTCAGTCCCGTCTGATCTCAGTTTGGGAATGAACTCCGTATG
259 CTGCCGATCCTGCTAC-GCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
4940198 CCTCAGCCAGCCGACGAAATGAGG-GGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
323 CCTAAGCCAACCGACGAAACG-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* *
4940262 CAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCACATCTTTATATTTTTGCATGCCAATG
387 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* *
4940326 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATTGCAA
452 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
4940391 GACGACTCGTTTTCTATTTTTCACGATTTTGGAAACTTTTTGCGGTTTGAGATTTTTTTAAATTT
517 GACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTTTAAAATTT
* * * * *
4940456 TTTTGGAAGGATTTTTAGCCCCAAACTTAGTAGACATGATCCTTATATTTTTTTTGGCATGCACA
581 TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACA
* * *
4940521 AAAAACTTCAACTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
646 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
4940586 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
711 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
** * * *
4940651 GAGTTCTAAAGGTTTGCTGAGGGATACGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
776 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
4940716 CATCATGTGCGCACACCCCCCGCCCCCCCGATCGTCGGAATCCCAATGCCG
841 CATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCG
* * ** * *
4940767 CTGGTCAAGTTCTCCGATGATGCTCCGGTGATGGTGCCCCGACGAAAGAAAAAGGCGGCACCAGC
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCG-AAGAAAAATGCGGCACCAGC
* * *
4940832 ACATGCCAGAGCCCAGCATGTGCTGTCACAACCCTCAGTCCGATCTGATCTTAGACTGGGAATGA
65 ACATGCC-GAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGA
* * *
4940897 ACTCGGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCGACCCACGAAATGAGCGTTCG
129 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCG
* * * * * * * ** *
4940962 AGCACCCAGCCGGCCAGAAGGGCGGGATGCACAAGCCAGGCATCGGCCGGGTCCCCTTCTGCGTG
194 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
* * * ** ** *
4941027 CTGTCAATCCTACTACAAAATGCTCAATCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
259 CTGCCGATCCTGCTACGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * *
4941092 CTTAGCCAACCGACGAAACGGGCGGGCAGGCGGGCACTACCCCAGCCAGAGAGACGGGATGCGCA
324 CTAAGCCAACCGACGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
4941157 AGCCGTGGATCGATAGGGTGGTAGGCGGGTTTAGGCACATCTTCATATTTCTGCATGCAAATGCC
389 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
4941222 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTCCACATGAAGTTTCATGGCAAGA
454 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
4941287 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTCTT
519 CGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTTTAAAATTTTT
* * * * *
4941352 TTGGAAGGACTTTTGGTCCCAAACTTGGTAGACATGATACTTGTATTTTTTTTGGCATGCAAAAA
583 TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
4941417 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
648 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
4941482 TAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
713 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
4941547 GTTCTTGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCATGTACCAGCTCCCATCGCACA
778 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
*
4941612 TCATGTGCGCACACCCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCA
843 TCATGTGCGCACA-CCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCCG
* * * * * * * *
4941663 CCGGTCAGGTTCTCCGACGGTGCTCTGGCGATGGTGCCCTGGCAAAGAAAAATACGACACCAGCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* **
4941728 CATGCTCGAGCCGAGCATGTGCTGCTGCAACCCTCGGTCTGGTCCGATTTTAGACTAGGAATGAA
66 CATGC-CGAGCCCAGCATGTGCTGCCACAA-CC-C--TC-GGT-C---------C-------G-A
* * * *
4941793 CTCCTTATGCTTAGACTAGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTCCATATGCCTA
107 -TCC-GAT-CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * * *
4941858 AGTCAACCCACGAAACGAGCATGCAGGCGTTCAGCCAGCCAGAGGGGCGGGATGCGCAAGTCGGG
169 AGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * * * * *
4941923 GATCGACCGGTTCCCCCTCTGCGTGCTGTCGATCTTACTGCCGTAACCCTCAGTCCGGT-TCGAT
234 GATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCT-ACGCAACCCTCAGTCTGGTCT-GAT
* * *** * *
4941987 CTTAGAC-CGGAATGAACTCCGTATGCCTAGGCCAACCGACGAAACGAATGGACGGCCGGGCACT
297 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGGGCGGGCGGGCGGGCACT
** * * *
4942051 ACGTTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGATGGGTTAAGGCAT
362 ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * *
4942116 TTCTTCATATTTTTGCATGCCAATGCCTTTTTTATGGCTTGTAAATTCATTTTACAATGGTCCCT
427 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCA---TACAATGGTCCCT
* *
4942181 TAAGCCCTTCACGTGAAGTTTCAT-GCAAGACGACCCGTTTTCTATTTTCCACGATTTTCGAAAC
489 TAAG-CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAAC
* * *
4942245 TATTTGCGGTTCGAGA-TTTTAAAATTTTTTTGGGAAGGAGTTTTGGCCCCCAAACTGTGGCTAG
553 TTTTTGCGGTTTGGGATTTTTAAAATTTTTTT-GGAAGGAGTTTTGG-CCCCAAACT-TGG-TAG
* * * *
4942309 ACGTGCATCCCTGTATTTTTTCTGGCATGCA-TAAAAAATTCAGCTAAAACCTCGAAGTGTACAA
614 ACGTG-ATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
4942373 GA-TTTGTGACCCATTTGAAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCCA
678 GATTTTGTGA-CCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-CA
* * *
4942437 AACCTGTAAAATCTCCAAATGCACTTTAAAGGGGTGGTGACTTCTCGAGGTTTGATGA-GGATAG
740 AACCTGTAAAATCT-CAAATGCTCTTTAAGGGGGT-GTGAGTTCTCGAGGTTTGATGAGGGATAG
** * * * *
4942501 GAAGCCAACATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGCACCGCCCCCCCCG
803 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCCGCC-
* * *
4942566 CCCCCAATCGCTGGAACCACAATGCCG
865 CCCCCGATCGCCGGAACCCCAATGCCG
* * * * * * *
4942593 CCGATCAGGTTCTCCGATGATGCTCTGGCAATGGTTCCCCGACGAAGAAAAATGTGGCACCAGCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* * * * *
4942658 CATGCTCGAGCCCAGCATATGCTGCCGCAACCCTTGGTCTGGTCCGATCTTAGACTGGGAATGAA
66 CATGC-CGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAA
* * * *
4942723 CTCCGTATGCTTAGACTGGGAATGAACTTCGTAT-CCTTAAGTCAACCCATGAAACGAGCGTACG
130 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC-TAAGTCAACCCACGAAATGAGCGTGCG
* * * ** * *
4942787 GGCGCTCAACCGGCCAGAGGGGCGGGATACG-AAGCCGGGGATCGGTCAAGTCCCACTCTACGTG
194 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
* * * *
4942851 CTGTCGATCCTGCTGCTGCAACCCTC-GATCTGGTTTGATCTTAGATTGGGAATGAACTCCGTAT
259 CTGCCGATCCTGCTAC-GCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * *
4942915 GCCTAAGCCAACAGACGAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACACCGGCCAAAGAGAC
322 GCCTAAGCCAACCGACG-AA--A-CGGGC--G--GGCGGGCGGGCACTACGCCGGCCAGAGAGAC
*
4942980 GGGATGCGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCACATCTTTATAATTT-TGC
379 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAT-ATTTCTGC
** * *
4943043 AT-TTACATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACATGAAGT
443 ATGCCA-ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * *
4943107 TTCATTGCAAGACGACTCGTTTTCTATTTTTCACGATTTTGGAAACTTTTTGCGGTTTGAGATTT
507 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TT
* * *
4943172 TTTAAAATTTTTTTGGAAAGATTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTTTT
571 TTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTT
*
4943237 GGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
636 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
4943302 GTGTCCCCATTTCAAACACTTTGATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTT
701 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
4943367 AAGGGGGTTTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
766 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
4943432 ACCCATCTCACATGATGTGCGCACACTGCCCCCCGACCTCCCCGATCGCCGGAACCCCAATGCCG
831 ACCCATCGCACATCATGTGCGCACA---CCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCCG
* * *
4943497 TCGGTCAAGTTCTCCGACGATGCT-C--CGA-----------CGAAGAAAAATGCGGCACCAGCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* * * * *
4943548 CATGCCCGAGCCCAACATGTGCTACCGCAACCCTCGGTCCGGT-CGATCTTAAACTGGGAATGAA
66 CATG-CCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAA
* *
4943612 CTCCGTATGCTTAGACTGGGAATGAACTCCATATACCTAAGTCAACCCACGAAATGAGCGTGCGG
130 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
* * * * *
4943677 GCACTCAGCCGGCCAGAAGGGCGGGATGCGCAAGCCGGGGATC-AGTCGGGTGCCCCTCTACATG
195 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTG
* * * * * * *
4943741 CTACCGATCCTGCTGCCGCAACCCTGAGTATGATCTGATCTTAGACTGGGATTGAACTCTGTATG
259 CTGCCGATCCTGCT-ACGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
4943806 CCTAAGCCAACCGACGAAATGAGTGGGCGGGCGGGCGGGCACTACGCGGGCCAGAGAGACGGGAT
323 CCTAAGCCAACCGACG-AA--A-CGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAT
* *
4943871 GCGCAAGCCGTGGATCGATAGGGTGGTAGCTGGATTTAGGCACATCTTCATATTTCTGCATGCCA
384 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
*
4943936 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGG
449 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * * * *
4944001 CAAGACAACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGAGGTTCGGGATTTTTTAAAA
514 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTTTAAAA
* * * ** *
4944066 TTTTTTTGGAAGGAGTTTTGGCCCCAAACCTGATAGACATGATCCTTGTATTTTTTTTCACTTGC
578 TTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGC
4944131 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
643 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * * *
4944196 CATTTTAGACACTTTAATGGCTACTGGCAGTAAACCTGCAAAATCTCAAATGCTCTTTTAGGGGG
708 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
4944261 AGTGAGTTCTCGAGGTTTGATGAGTGATAGAGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
773 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* *
4944326 GCACATCATGTGCGCACACCCCCCGACCTCCCCGATCGCCGGAACCGCAATGCCG
838 GCACATCATGTGCGCACACCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCCG
** *
4944381 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCTTGGCGAAGAAAAATGCGGCTCCAGCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* ** * *
4944446 GATGCTCGAGCCCAGCATGTGCTGCCGGAACCCTCGGTCCGGTCCGATCTTAGACTTGGAATGAA
66 CATGC-CGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAA
* * *
4944511 CTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCATAAGTCAACCCACGAAATGAACGTGCGG
130 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
* * * * *
4944576 GCGCTTAGTC-ACCAAAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGC
195 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
* * * * *
4944640 TGCCCATCTTGCTGCCGCAACCCTCAGTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGC
260 TGCCGATCCTGCT-ACGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* ** * *
4944705 CTAAGCCAACCGACGAAA----TGAACGGGCGGGCACTATGCCAGCCAGAGAGACGGGATGCGCA
324 CTAAGCCAACCGACGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * * *
4944766 AGCCGTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACCTCTTCATATTTTTACGTGCCAATGCC
389 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
4944831 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
454 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * *
4944896 CGACTTGCTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTT
519 CGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTTTAAAATTTTT
* * * *
4944961 TCGAAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAA
583 TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* *
4945026 AACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTT
648 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
4945091 AAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
713 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
4945156 GTTTTGGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
778 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
4945221 TCCTGTGTGCACACCCCCCG-CCCCCCGATCGTCGGAACCCCAATGCCG
843 TCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCG
* ** * * * *
4945269 CCGGTCAGGTTCTCTGGCGATGCTCCGATGATGGTGCCCCGACGAAGAAAAATGTGGCACCACCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* *
4945334 CATGCTCGAGCCTAGCATGTGCTGCCACAA-AC-C--T-CG----G-TC-----C--GG--T---
66 CATGC-CGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAA
* * **
4945377 CT--G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGGGTGCAT
130 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
* * * *
4945438 GTGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGGTCCCCCTCTGCGTGC
195 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
* * * * **
4945503 TGCTGATCCTGCTGCCACAACACTCAAACTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
260 TGCCGATCCTGCT-ACGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * ** *
4945568 CTAAGCCAACCGAGGAAAAGAACGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCA
324 CTAAGCCAACCGACGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
*
4945633 AGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
389 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
4945698 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
454 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * **
4945763 CGACTCGTTTTCTATTTTTCATGATTTTCTAAACTTTTTTCGGTTTGGGATTTTTTTTAATTTTT
519 CGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTTTAAAATTTTT
* * *
4945828 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
583 TTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
*
4945893 AAAATTCAGCTAAAAACTCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
648 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
4945958 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGA
713 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
4946023 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTATCAGCACCGATCGCACA
778 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
4946088 TCATGTGCACACACCCCCCCGGCCCCCCCGATCGCTGGAACCCCAATGCCG
843 TCATGTGCGCACA-CCCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCG
* ** * *
4946139 TCGGTCAGGTTC-CTCGGCGATGCTCCGACGATGGTGCCCCGACGAATAAAAATGCGGCACCAGC
1 CCGGTCAGGTTCTC-CGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGC
* * * * * * * *
4946203 ACATGCCCGAGCCCAGCATGTGCTGTCATAACCCTCCGTCTGGTCTGATCTTAGACTTGCAATGA
65 ACATG-CCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGA
* ** **
4946268 AATCCGTATGCTT-GACTGGGAATGAACTCCGTATGCCTAAACCAACCCACGAAACAAGCGTGCG
129 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCG
* * * * * ** * * *
4946332 GGCGCTCAGCCCGCCAGAGGGGCGGGATACACAAGTCGGGGATCGACCTAGTCCCCTTTTGCATG
194 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTG
* * * *
4946397 CTGCAGATCCTGCTGCTGTAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
259 CTGCCGATCCTGCTAC-GCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
4946462 CCTAAGCCAACCGACCAAAAGAGCGGGCGGGCGGGTGGGCGGGAAGGTGGGCACTACGCTGGCTA
323 CCTAAGCCAACCGA-C-GAA-A-CGGGCGGGC----GGGC--------GGGCACTACGCCGGCCA
* * * * * *
4946527 GAGAAACGGGATGCACAAGCCATCGATCGATAGGGCGGTAGGTGGGTCTAGGCACATCTTCATAT
372 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
4946592 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
437 TTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGT
* * * * *
4946657 AAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAGGATTTTCCAAACTTTTTGTGGTTCCG
502 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTT-TG
* **
4946722 GGATTTTTTAAATTTTTTTGGAAGGAGTTTTGGGGCCAAACTTGGTAGACGTGATCCTTGTATTT
566 GGATTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
4946787 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTTCAAGATTTTGTGACCATTTGA
631 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
4946852 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
696 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * *
4946917 TCTTTTAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGCATAGGGGGCCAATATAAGGGCCAAATA
761 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
4946982 CCAGCACCCATCACACATTATGTGCGTACACCCCCC-CAGCCCCCCGATCGCCGGAACCCCAATG
826 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGC--CCCCCCGATCGCCGGAACCCCAATG
4947046 CCG
889 CCG
** * * * * **
4947049 TTGGTCAGGTTCTCCGGTGATGCTCTGGCGATTGTGCCATGGCGAAGAAAAATGCGGCACCAGCA
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
** * *
4947114 CATGCCCGAGCCCAGCATGTGCTGGTACAACCCTCGGTCTGATCCAATCTTAGACTGGGAATGAA
66 CATG-CCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAA
* * *
4947179 CTGCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
130 CTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGG
* * * * * *
4947244 GCGCTCAGTCGGCCAGAGGGTCGGGATGCGTAAGCCGAGGATTGATCGGGTCCCCCTTTGCGTGC
195 GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGC
* * * ** ** * *
4947309 TACCCATCTTGCTACCGCAACCCTTTGT-TCGGTCCAATCTTAGACTGGCAATGAACTCCATATG
260 TGCCGATCCTGCTA-CGCAACCCTCAGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
4947373 CCAAAGCCAACCGACGAAACAAGCGGGAGGGGGGGCGGGCGGACACTACGCCGGCCAGAGAGACG
323 CCTAAGCCAACCGACG--A-AA-C----GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACG
* *
4947438 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTGCGT
380 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* * *
4947503 GCCAATGCCATTTTTATGGCTTGGAAATTCTTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTT
445 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * * * *
4947568 ATGGCAAGATGACTCCTTTTCTACTTTTCACGATTTTCAAAACGTTTTGCGGTTCGGGATTTTTT
510 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTTT
* * * *
4947633 AAACTTTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGCCGTGATCCTTGTATTTTTGTTGGC
574 AAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGC
*
4947698 ATGCGCAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
639 ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* *
4947763 TCCCCATTTCAGACACTTTAATGGCTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTTAG
704 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
*
4947828 GGGGTGTGAGTTCTCGAGGTTTGATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
769 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * *
4947893 TATCACACATCATGTGTGCACACCCCCCAGCCCCCCCGATCACCGGAACCTCAATGCCG
834 CATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCG
* * * *
4947952 CCGGTCAGGTTCTACGATGATGCTCCGGCGATGGTGCACCGGCAAAGAAAAAT---------G--
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
* *
4948006 --TGGC-A--CCAGCATGTGCTGGCACAACCCTCGGT-C--T--GATC-----C---------A-
66 CATGCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
* * **
4948046 -----AT-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAATGAGCGTATGGG
131 TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGG
* * * * * * *
4948105 CACTCAGTCGGCCAGAGGGCCGGGATGCGTAACCCGAGGATCGATCGGGTCCCCCTTTGCGTGCT
196 CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
* * * * ** * * * *
4948170 ACCCATCTTGCTACCACAACCCTTGGTC-CGTCTAATCCTTAGA-TGGGAACGAACTCTGTATGC
261 GCCGATCCTGCTA-CGCAACCCTCAGTCTGGTCTGAT-CTTAGACTGGGAATGAACTCCGTATGC
* *
4948233 CTAAGCCAACCGACGAAACAAGCGGCGGGGCGGGGGGGACACTACG-CGGCCAGAGAGACAGGAT
324 CTAAGCCAACCGACGAAAC--G-GGC-GGGCGGGCGGG-CACTACGCCGGCCAGAGAGACGGGAT
* * * *
4948297 ACGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCCCATCCTTCATATTT-TACCGTGC
384 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT-CTTCATATTTCT-GCATGC
* * *
4948360 CAATGCCATTTTTATGGCTGGGAAATTCATACAATGGTCCCTGAAGCC-TCACGTG-AG-TTCAT
447 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
4948422 GGCAAGACAACTCG-TTTCTACTTTTTCAC-AATTT-GAAACTTTTTGCTGGTTCGGGACTTTTT
512 GGCAAGACGACTCGTTTTCTA-TTTTTCACGATTTTCGAAACTTTTTGC-GGTTTGGGA-TTTTT
* * *
4948484 AAAAGTTTTTTGGAAAGGAGTTTTGGACCCAAACTTGGTAGCCGTGATCCTTGTA-TTTTTTTGG
574 AAAATTTTTTTGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
*
4948548 CATGCAC-AAAAAATTCAGCCTAAAAACTCGAAGTGTACAAGATTTTCGGTGACCTTTTTGAAAA
638 CATGCACAAAAAAATTCAG-CTAAAAACTCGAAGTGTACAAGATTTT--GTGACC-ATTTGAAAA
* *
4948612 AAGTGTCCCCCATTTCAGACACTTTAATGGCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTC
699 AAGTGT-CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * *
4948677 TTTTAGGGGCTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGAGCCAAGTACC
763 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* *
4948742 AGCACCCATCGCACATCATGTGCGCACACCACCCAGCCCCCCCGATCGTCGGAACCCCAATGCCG
828 AGCACCCATCGCACATCATGTGCGCACACC-CCCCGCCCCCCCGATCGCCGGAACCCCAATGCCG
*** * * * * *
4948807 TTAGTCAGGTTCTTCGGTGATGCTCCGACGATGGTGCCTCGGC-ATAAAAAAATGTGGCACCAGC
1 CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGA-AGAAAAATGCGGCACCAGC
** * *
4948871 ACATG-CTTG---A-C-TG-G--G-AATGAA--CTC--T---AT---ATGCTTAGACT-GG---G
65 ACATGCCGAGCCCAGCATGTGCTGCCA-CAACCCTCGGTCCGATCCGAT-CTTAGACTGGGAATG
* *
4948912 -A------ATG---A-AC------T---CT--GTATGCCTAAGTCAACCCATGAAACGAGCGTGC
128 AACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGC
* * * * * *
4948955 GGGAGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTC-GAT-CCCCTCTACGT
193 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGT
* * * *
4949018 GCTGCCGATCCTGCTACCGTAATCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTAT
258 GCTGCCGATCCTGCTA-CGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * * *
4949083 GTCTAAGCCAACTGACAAAACGAGTGGGCGGGTGGGCGGGCGGGCACTACCCCGGCCAGAGAGAC
322 GCCTAAGCCAACCGACGAAAC----GGGC----GGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * *
4949148 GAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGATTAGGCAAATCTTCATATTTTTGCA
379 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCA
*
4949213 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTT
444 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* * ** * * * *
4949278 CATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTAAAAGTTTTTACCG-TTCGGATTTTT
509 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGA-TTTT
** ** * * *
4949342 TAAAA-TCCTTCAGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGT
573 TAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
* *
4949406 CATGCATAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
638 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
*
4949471 GTCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
703 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
4949536 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCAC
768 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
*
4949600 CCATCGCACATCATGTGCGGACACCCCCCAG-CCCCCCGATCGCC
833 CCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCC
4949644 NNNNNNNNNN
Statistics
Matches: 9275, Mismatches: 1073, Indels: 629
0.84 0.10 0.06
Matches are distributed among these distances:
850 21 0.00
851 114 0.01
852 118 0.01
853 137 0.01
854 141 0.02
855 339 0.04
856 121 0.01
857 70 0.01
858 50 0.01
859 83 0.01
860 158 0.02
861 12 0.00
862 60 0.01
863 125 0.01
864 208 0.02
865 9 0.00
866 9 0.00
867 531 0.06
868 267 0.03
869 11 0.00
870 116 0.01
871 34 0.00
872 12 0.00
873 32 0.00
874 20 0.00
875 24 0.00
876 12 0.00
877 30 0.00
878 16 0.00
879 22 0.00
880 24 0.00
881 24 0.00
882 9 0.00
883 21 0.00
884 90 0.01
885 8 0.00
886 106 0.01
887 431 0.05
888 118 0.01
889 137 0.01
890 641 0.07
891 8 0.00
892 4 0.00
893 136 0.01
894 692 0.07
895 238 0.03
896 73 0.01
897 12 0.00
898 389 0.04
899 114 0.01
900 13 0.00
901 216 0.02
902 64 0.01
903 667 0.07
904 193 0.02
905 71 0.01
906 49 0.01
907 29 0.00
908 81 0.01
909 12 0.00
910 171 0.02
911 686 0.07
912 60 0.01
915 7 0.00
917 1 0.00
918 1 0.00
919 2 0.00
920 2 0.00
921 287 0.03
922 36 0.00
923 13 0.00
924 74 0.01
925 30 0.00
926 48 0.01
927 63 0.01
928 16 0.00
929 77 0.01
930 129 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (891 bp):
CCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCA
CATGCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAAC
TCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGCGTGCGGG
CGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCT
GCCGATCCTGCTACGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCT
AAGCCAACCGACGAAACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTGCGGTTTGGGATTTTTAAAATTTTTTTG
GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCG
Found at i:4941813 original size:26 final size:26
Alignment explanation
Indices: 4941777--4941854 Score: 138
Period size: 26 Copynumber: 3.0 Consensus size: 26
4941767 TGGTCCGATT
4941777 TTAGACTAGGAATGAACTCCTTATGC
1 TTAGACTAGGAATGAACTCCTTATGC
4941803 TTAGACTAGGAATGAACTCCTTATGC
1 TTAGACTAGGAATGAACTCCTTATGC
* *
4941829 TTAGACTGGGAATGAACTCCATATGC
1 TTAGACTAGGAATGAACTCCTTATGC
4941855 CTAAGTCAAC
Statistics
Matches: 50, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 50 1.00
ACGTcount: A:0.31, C:0.19, G:0.21, T:0.29
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCTTATGC
Found at i:4942735 original size:26 final size:26
Alignment explanation
Indices: 4942706--4942761 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
4942696 CTGGTCCGAT
*
4942706 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATC
*
4942732 CTTAGACTGGGAATGAACTTCGTATC
1 CTTAGACTGGGAATGAACTCCGTATC
4942758 CTTA
1 CTTA
4942762 AGTCAACCCA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.27, C:0.20, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATC
Found at i:4944532 original size:26 final size:26
Alignment explanation
Indices: 4944494--4944546 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4944484 CCGGTCCGAT
* *
4944494 CTTAGACTTGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4944520 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4944546 C
1 C
4944547 ATAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4947213 original size:26 final size:26
Alignment explanation
Indices: 4947162--4947214 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4947152 CTGATCCAAT
*
4947162 CTTAGACTGGGAATGAACTGCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
4947188 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4947214 C
1 C
4947215 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4948843 original size:855 final size:847
Alignment explanation
Indices: 4941806--4949643 Score: 6962
Period size: 911 Copynumber: 8.9 Consensus size: 847
4941796 CTTATGCTTA
* * * * *
4941806 GACTAGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGA
1 GACTCGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGA
* * ** * * * * * * * *
4941871 AACGAGCATGCAGGCGTTCAGCCAGCCAGAGGGGCGGGATGCGCAAGTCGGGGATCGACCGGTTC
66 AACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAAGCCGAGGATCGATCGGGTC
* ** * * * * ** * * *
4941936 CCCCTCTGCGTGCTGTCGATCTTACTGCCGTAACCCTCAGTCCGGTTCGATCTTAGAC-CGGAAT
131 CCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGT-CGGTCCAATCTTAGACTGGGAAT
* * * *
4942000 GAACTCCGTATGCCTAGGCCAACCGACGAAACGAATG-GAC----GGC---CGGGCACTACGTTG
195 GAACTCCGTATGCCTAAGCCAACCGACGAAAC-AA-GCGGCGGGGGGCGGGCGGACACTACG-CG
* * **
4942057 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGATGGGTTAAGGCATTTCTTC
257 GCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* * *
4942122 ATATTTTTGCATGCCAATGCCTTTTTTATGGCTTGTAAATTCATTTTACAATGGTCCCTTAAGCC
321 ATA-TTTTGCGTGCCAATGCCATTTTTATGGCTTGGAAATTCA---TACAATGGTCCCTTAAG-C
* * * * *
4942187 CTTCACGTGAAGTTTCAT-GCAAGACGACCCGTTTTCTA-TTTTCCACGATTTTCGAAACTATTT
381 CTTCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTTTCAC-ATTTT-AAAACTTTTT
* * *
4942250 GCGGTTCGAGA--TTTTAAAATTTTTTTGGGAAGGAGTTTTGGCCCCCAAACTGTGGCTAGACGT
443 GCGGTTCGGGATTTTTTAAAA-TTTTTT-AGAAGGAGTTTTGG-CCCCAAACT-TGG-TAGCCGT
* * *
4942313 GCATCCCTGTATTTTT-TCTGGCATGCATAAAAAATTCAGCTAAAACCTCGAAGTGTACAAGA-T
503 G-ATCCTTGTATTTTTGT-TGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATT
*
4942376 TTGTGACCCATTTGAAAAAAAGTGTCCCCATTTCAGACACTTTAAGGGCTACTGGCAGCCAAACC
566 TTGTGA-CCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-CAAACC
* * * * *
4942441 TGTAAAATCTCCAAATGCACTTTAAAGGGGTGGTGACTTCTCGAGGTTTGATGA-GGATAGGAAG
628 TGTAAAATCT-CAAATGCTCTTTTAGGGGGT-GTGAGTTCTCGAGGTTTGATGAGGGATAGG-GG
* * * **
4942505 CCAACATAGGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCGCACCGCCCCCCCCGCCCC
690 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCAGCC-CCCC
* * * * * * * * *
4942570 CAATCGCTGGAACCACAATGCCGCC-GATCAGGTTCTCCGATGATGCTCTGGCAATGGTTCCCCG
753 CGATCGCCGGAACCCCAATGCCGCCAG-TCAGGTTCTACGATGATGCTCCGACGATGGTGCCTCG
* *
4942634 ACGA-AGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCATATGCTGCCGCAACCCTTGGTCT
817 GC-ATAAAAAAATGT-------G-----G--C-A--CCAGC--A--------C-A----T-G-CT
4942698 GG
847 -G
*
4942700 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTAT-CCTTAAG
1 ---GA-C-T---C--GGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCC-TAAG
* * ** * * *
4942764 TCAACCCATGAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGGATACG-AAGCCGGGGA
55 TCAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAAGCCGAGGA
* ** * * * ** * * * * * * ***
4942828 TCGGTCAAGTCCCACTCTACGTGCTGTCGATCCTGCTGCTGCAACCCTCGATCTGGTTTGATCTT
120 TCGATCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGTC-GGTCCAATCTT
* * * *
4942893 AGATTGGGAATGAACTCCGTATGCCTAAGCCAACAGACGAAACGAGCGGGCGGGCAGGCGGGCGG
184 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGC-GGCGGG-GGGCGGGCGG
* * *
4942958 GCACTACACCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTA
247 ACACTAC-GCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * ** * *
4943022 GGCACATCTTTATAATTTTGCAT-TTACATGCCATTTTTATGGCTTGTAAATTCGTACAATGGTC
310 GGCACATCTTCAT-ATTTTGCGTGCCA-ATGCCATTTTTATGGCTTGGAAATTCATACAATGGTC
* * * *
4943086 CCTTAAGCCTTCACATGAAGTTTCATTGCAAGACGACTCGTTTTCTA-TTTTTCACGATTTTGGA
373 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTTTCAC-ATTTT-AA
* * * * *
4943150 AACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTTGGAAAGATTTTTGGCCCCAAACTTGGTAG
435 AACTTTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAG
** * *
4943215 ATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAG
499 CCGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
4943280 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTGATGGCTACTGGCAGCAAACC
563 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * *
4943345 TGTAAAATCTTAAATGCTCTTTAAGGGGGTTTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCC
628 TGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCC
* * * *
4943410 AATATAAGGGCCAAGTACCAGCACCCATCTCACATGATGTGCGCACACTGCCCCCCGACCTCCCC
692 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC--CCCCCAG-CCCCCCC
* * * * * * *
4943475 GATCGCCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGACGATGCTCCGACGAAGAAAAATGCGG
754 GATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTACGATGATGCTCCGACGATG----GTGC--
* * ** * * *
4943540 CACCAGCACATGCCCGAGCCCAACATGT-GCTACC-GCAACCCTCGGTCCGGTC
813 C-TC-G-GCAT-----A--AAAAAATGTGGC-ACCAGC-A-CAT--G--C--TG
* * * *
4943592 GATCTTAAACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATACCTAAGTCAA
1 GA-C-T---C--GGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAA
* * * * *
4943657 CCCACGAAATGAGCGTGCGGGCACTCAGCCGGCCAGAAGGG-CGGGATGCGCAAGCCGGGGATC-
59 CCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAG-AGGGCCGGGATGCGTAAGCCGAGGATCG
* * * * * * * * * **
4943720 AGTCGGGTGCCCCTCTACATGCTACCGATCCTGCTGCCGCAACCC-TGAGTATGATCTGATCTTA
123 A-TCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTG-GT-CGGTCCAATCTTA
* * ** * * *
4943784 GACTGGGATTGAACTCTGTATGCCTAAGCCAACCGACGAAATGAG-TG-GGCGGGCGGGCGGGCA
185 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGCGGGGGGCGGGCGGACA
* *
4943847 CTACGCGGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGGATTTAGGC
250 CTACGC-GGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
* * *
4943912 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGCCCCTT
313 ACATCTTCATATTT-TGCGTGCCAATGCCATTTTTATGGCTTGGAAATTCATACAATGGTCCCTT
** * *
4943977 AAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTA-TTTTTCATGATTTTTGAAACT
377 AAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTTTCA-CA-TTTTAAAACT
* * * * * *
4944041 TTTTGAGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACCTGATAGACAT
439 TTTTGCGGTTCGGGATTTTTTAAAA-TTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGCCGT
* ** *
4944106 GATCCTTGTATTTTTTTTCACTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
503 GATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
* * *
4944171 TGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGTAAACCTGCA
567 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
4944236 AAATCTCAAATGCTCTTTTAGGGGGAGTGAGTTCTCGAGGTTTGATGAGTGATAGAGGGCCAATA
632 AAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG-GGGCCAATA
*
4944301 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-GACCTCCCCGATCGC
696 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAG-CCCCCCCGATCGC
* * * * *
4944365 CGGAACCGCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCTTGGCGA-AGA
760 CGGAACCCCAATGCCGCCAGTCAGGTTCTACGATGATGCTCCGACGATGGTGCCTCGGC-ATAAA
*
4944429 AAAATGCGGCTCCAGCAGATGCTCGAGCCCAGCATGTGCTGCCG
824 AAAAT---G-T--GGC--A--C-C-AG--CA-CA--TGCT---G
* *
4944473 GAACCCTCGGTCCGGTCCGATCTTAGACTTGGAA-TGAACTTCGTATGCTTAGACTGGGAATGAA
1 G-A----C--T-C-G---G-----A-A--T-GAACT--CCA---TATGCTTAGACTGGGAATGAA
* * * * * * * * * *
4944537 CTCCGTATGCATAAGTCAACCCACGAAATGAACGTGCGGGCGCTTAGTC-ACCAAAGGGGCGGGA
40 CTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGA
* * * * **
4944601 TGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCCATCTTGCTGCCGCAACCCTCA
105 TGCGTAAGCCGAGGATCGATCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTG
* * *
4944666 GTCTGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAATGAA----
170 GTC-GGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA-CAAGCGG
* * *
4944727 C---GGGC--G-GG-CACTATGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGCT
233 CGGGGGGCGGGCGGACACTACG-CGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGT
* * *
4944785 GGTAGGTGGGTTTAGGCACCTCTTCATATTTTTACGTGCCAATGCCATTTTTATGGCTTGTAAAT
296 GGTAGGTGGGTTTAGGCACATCTTCATA-TTTTGCGTGCCAATGCCATTTTTATGGCTTGGAAAT
* *
4944850 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGCTTTCTA-TTTT
360 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTT
* * * * * * *
4944914 TCATGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTAAAATTTTTTCGAAAGGATTTTTGGCC
424 TCA-CA-TTTTAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTAG-AAGGAGTTTTGGCC
* * *
4944979 CCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAACATTCAGCTAAAAACT
486 CCAAACTTGGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-ATTCAGCTAAAAACT
* *
4945044 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTAAGACACTTTAATGGCTA
550 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * * *
4945109 TTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTGGAGGTTTGATGA
615 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* *
4945174 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCCTGTGTGCACACCCCC
680 GGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * ** *
4945239 C-G-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT-CTGGCGATGCTCCGATGAT
744 CAGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTAC-GATGATGCTCCGACGAT
* * * *
4945301 GGTGCCCCGACGA-AGAAAAATGTGGCACCACCACATGCTCG
808 GGTGCCTCGGC-ATAAAAAAATGTGGCACCAGCACATGCT-G
* * * * *
4945342 AGCCTAGCATGTG-CTGCCACAAACCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
1 -GACT--C--G-GAATG-----AA---C--TCC-ATATG--CTTAGACTGGGAATGAACTTCGTA
* * ** ** * * * *
4945406 TGCCTAAGTCAACCCACGAAACGAGGGTGCATGTGCTCAGCCAGCCAGAGGGGCGGGATGCGCAA
47 TGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAA
* * * * * ** * * * * ****
4945471 GTCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACACTCAAACTGGT
112 GCCGAGGATCGATCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGTC-GGT
** * **
4945536 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-GGAA-AAG-AAC---GGGC
176 CCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGCGGGGGGC
* * *
4945595 GGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTG
241 GGGCGGACACTACG-CGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* *
4945660 GGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
304 GGTTTAGGCACATCTTCATATTT-TGCGTGCCAATGCCATTTTTATGGCTTGGAAATTCATACAA
* *
4945725 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTTCATGATT
368 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTTTCA-CATT
* * * ** *
4945789 TTCTAAACTTTTTTCGGTTTGGGATTTTTTTTAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
431 TT-AAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT-AGAAGGAGTTTTGGCCCCAAACTT
* * *
4945854 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGATGTGT
494 GGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCA-CAAAAAATTCAGCTAAAAACTCGAAGTGT
*
4945919 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGC
558 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
4945984 AAACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
623 AAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-G
* * * *
4946049 GGGCCAATATAAGGGCCAAGTATCAGCACCGATCGCACATCATGTGCACACACCCCCCCGGCCCC
687 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCAGCCCC
* * * ** *
4946114 CCCGATCGCTGGAACCCCAATGCCGTCGGTCAGGTTCCT-CGGCGATGCTCCGACGATGGTGCCC
751 CCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTT-CTACGATGATGCTCCGACGATGGTGCCT
* *
4946178 CGACGAATAAAAATGCGGCACCA-GCACATGCCCGAGCCCAGCATGTGCTGTCATAACCCTCCGT
815 CG--GCATAAAAA------A--ATG----TG-GC-A--CCAGCA--------C---A---T--G-
4946242 CTGG
845 CT-G
* * * * **
4946246 TCTGATCTTAGACTTGCAATGAAATCCGTATGCTT-GACTGGGAATGAACTCCGTATGCCTAAAC
1 ---GA-C-T---C--GGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGT
* * * * * * * ** * *
4946310 CAACCCACGAAACAAGCGTGCGGGCGCTCAGCCCGCCAGAGGGGCGGGATACACAAGTCGGGGAT
56 CAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAAGCCGAGGAT
* ** * * * ** * * * * ** **
4946375 CGACCTAGTCCCCTTTTGCATGCTGCAGATCCTGCTGCTGTAACCCTCAGTCCGGTCTGATCTTA
121 CGATCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGT-CGGTCCAATCTTA
* *
4946440 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACCAAA-AGAGCGGGCGGGCGGGTGGGCGG
185 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACA-AGC-GGCGGG-GGGCGGGC-G
* * * * * *
4946504 GAAGGTGGGCACTACGCTGGCTAGAGAAACGGGATGCACAAGCCATCGATCGATAGGGCGGTAGG
246 G-A------CACTACGC-GGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
4946569 TGGGTCTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
302 TGGGTTTAGGCACATCTTCATATTT-TGCGTGCCAATGCCATTTTTATGGCTTGGAAATTCATAC
* * *
4946634 AATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTTCAGGA
366 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTTTCA-CA
* * * * **
4946698 TTTTCCAAACTTTTTGTGGTTCCGGGATTTTTTAAATTTTTTTGGAAGGAGTTTTGGGGCCAAAC
429 TTTT-AAAACTTTTTGCGGTT-CGGGATTTTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAAC
*
4946763 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
492 TTGGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGT
*
4946828 GTTCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
556 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * *
4946893 GCAAACCTATAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGCATA
621 GCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * *
4946958 GGGGGCCAATATAAGGGCCAAATACCAGCACCCATCACACATTATGTGCGTACACCCCCCCAG-C
686 -GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCAGCC
*** * * * * *
4947022 CCCCCGATCGCCGGAACCCCAATGCCGTTGGTCAGGTTCTCCGGTGATGCTCTGGCGATTGTGCC
749 CCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTACGATGATGCTCCGACGATGGTGCC
* *
4947087 AT-GGCGA-AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG
814 -TCGGC-ATAAAAAAATG-TG-----G--CA---CC-AG--CA-CA--TGCTG
*
4947138 GTACAACCCTCGGTCTGATCCAATCTTAGACTGGGAATGAACTGCATATGCTTAGACTGGGAATG
1 G----A--CTC-G---G----------A-A-------TGAACTCCATATGCTTAGACTGGGAATG
* * * *
4947203 AACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGTCGG
38 AACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGG
*
4947268 GATGCGTAAGCCGAGGATTGATCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCT
103 GATGCGTAAGCCGAGGATCGATCGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCC-
* * * *
4947333 TTGTTCGGTCCAATCTTAGACTGGCAATGAACTCCATATGCCAAAGCCAACCGACGAAACAAGCG
167 TTGGTCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGC-
*
4947398 GGAGGGGGGGCGGGCGGACACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
231 GG-CGGGGGGCGGGCGGACACTACG-CGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAG
*
4947463 GGTGGTAGGTGGGTTTAGGCACATCTTGATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGGA
293 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGCGTGCCAATGCCATTTTTATGGCTTGGA
* * *
4947528 AATTCTTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTATGGCAAGATGACTCCTTTTCTAC-
357 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT-CGTTTCTACT
* * *
4947592 TTTTCACGATTTTCAAAACGTTTTGCGGTTCGGGATTTTTTAAACTTTTTTTCGAAGGAGTTTTG
421 TTTTCAC-ATTTT-AAAACTTTTTGCGGTTCGGGATTTTTTAAA-ATTTTTTAGAAGGAGTTTTG
*
4947657 GCCCCAAACTTGGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCGCAAAAAAATTCAGCTAAAA
483 GCCCCAAACTTGGTAGCCGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAA
4947722 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
547 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
*
4947787 CTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGA
612 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGA
* * * *
4947852 TGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCACACATCATGTGTGCACACC
677 TGAGGGATA-GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * *
4947917 CCCCAGCCCCCCCGATCACCGGAACCTCAATGCCGCCGGTCAGGTTCTACGATGATGCTCCGGCG
741 CCCCAGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTACGATGATGCTCCGACG
**
4947982 ATGGTGCAC-CGGCA-AAGAAAAATGTGGCACCAGCATGTGCTG
806 ATGGTGC-CTCGGCATAA-AAAAATGTGGCACCAGCACATGCTG
**
4948024 GCACAACCCTCGGTCTG-A-TCCA-AT-CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAAC
1 G----A--CTCGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAAC
* ** *
4948085 CCATGAAATGAGCGTATGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAACCCGAGGATCGAT
60 CCATGAAACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAAGCCGAGGATCGAT
* * *
4948150 CGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCACAACCCTTGGTCCGTCTAATCCTTAGA-T
125 CGGGTCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGTCGGTCCAAT-CTTAGACT
* *
4948214 GGGAACGAACTCTGTATGCCTAAGCCAACCGACGAAACAAGCGGCGGGGCGG-GGG-GGACACTA
189 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGCGGGG-GGCGGGCGGACACTA
* *
4948277 CGCGGCCAGAGAGACAGGATACGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCCCAT
253 CGCGGCCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
4948341 CCTTCATATTTTACCGTGCCAATGCCATTTTTATGGCTGGGAAATTCATACAATGGTCCCTGAAG
317 -CTTCATATTTT-GCGTGCCAATGCCATTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAG
** * *
4948406 CC-TCACGTG-AG-TTCATGGCAAGACAACTCGTTTCTACTTTTTCACAATTTGAAACTTTTTGC
380 CCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTCTACTTTTTCACATTTTAAAACTTTTTGC
* * *
4948468 TGGTTCGGGACTTTTTAAAAGTTTTTTGGAAAGGAGTTTTGGACCCAAACTTGGTAGCCGTGATC
445 -GGTTCGGGATTTTTTAAAA-TTTTTTAG-AAGGAGTTTTGGCCCCAAACTTGGTAGCCGTGATC
4948533 CTTGTATTTTT-TTGGCATGCACAAAAAATTCAGCCTAAAAACTCGAAGTGTACAAGATTTTCGG
507 CTTGTATTTTTGTTGGCATGCACAAAAAATTCAG-CTAAAAACTCGAAGTGTACAAGATTTT--G
* * *
4948597 TGACCTTTTTGAAAAAAGTGTCCCCCATTTCAGACACTTTAATGGCTACTAGCAGTAAACCTGTA
569 TGACC-ATTTGAAAAAAGTGT-CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
4948662 AAATCTCAAATGCTCTTTTAGGGGCTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATA
632 AAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG-GGGCCAATA
* * *
4948727 TAAGAGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCAGCCCCCCCGATCGTC
696 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCC
** * *
4948792 GGAACCCCAATGCCGTTAGTCAGGTTCTTCGGTGATGCTCCGACGATGGTGCCTCGGCATAAAAA
761 GGAACCCCAATGCCGCCAGTCAGGTTCTACGATGATGCTCCGACGATGGTGCCTCGGCATAAAAA
*
4948857 AATGTGGCACCAGCACATGCTT
826 AATGTGGCACCAGCACATGCTG
* *
4948879 GACTGGGAATGAACTCTATATGCTTAGACTGGGAATGAAC-TCTGTATGCCTAAGTCAACCCATG
1 GACTCGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTC-GTATGCCTAAGTCAACCCATG
* * * * * *
4948943 AAACGAGCGTGCGGG-AGCTCAGTCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGTC-GA
65 AAACGAGCGTGCGGGCA-CTCAGTCGGCCAGAGGGCCGGGATGCGTAAGCCGAGGATCGATCGGG
* * * * * * * * *
4949006 T-CCCCTCTACGTGCTGCCGATCCTGCTACCGTAATCCTCGGTCTGGTCCGATCTTAGACTGGGA
129 TCCCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGTC-GGTCCAATCTTAGACTGGGA
* * * * * * *
4949070 ATGAACTCCGTATGTCTAAGCCAACTGACAAAACGAGTGGGCGGGTGGGCGGGCGGGCACTACCC
193 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAG-CGGCGGG-GGGCGGGCGGACACTA-CG
* *
4949135 CGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGATTAGGCAAATCT
255 CGGCCAGAGAGACG-GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * *
4949200 TCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCT
319 TCATA-TTTTGCGTGCCAATGCCATTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCT
* * *
4949265 TCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTA-TTTTTCATGATTTTTAAAAGTTTTTAC
383 TCACGTGAAGTTTCATGGCAAGATGACTCG-TTTCTACTTTTTCA-CA-TTTTAAAACTTTTTGC
* ** * * *
4949329 CGTTC-GGATTTTTTAAAATCCTTCAGATGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
445 GGTTCGGGATTTTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGCCGTGATCCTT
* *
4949393 GTATTTTTGTTGTCATGCATAAAAAATTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
510 GTATTTTTGTTGGCATGCACAAAAAA-TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
*
4949458 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAGTGGCTACTGGCAGCAAACCTGTAAAATCTC
574 ATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTC
*
4949523 AAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCC
639 AAATGCTCTTTTAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCC
*
4949588 AAGTACCAGCACCCATCGCACATCATGTGCGGACACCCCCCAG-CCCCCCGATCGCC
704 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCC
4949644 NNNNNNNNNN
Statistics
Matches: 5986, Mismatches: 643, Indels: 669
0.82 0.09 0.09
Matches are distributed among these distances:
849 6 0.00
850 22 0.00
851 116 0.02
852 126 0.02
853 163 0.03
854 145 0.02
855 349 0.06
856 109 0.02
857 82 0.01
858 54 0.01
859 90 0.02
860 156 0.03
861 14 0.00
862 64 0.01
863 126 0.02
864 4 0.00
865 3 0.00
866 9 0.00
867 452 0.08
868 16 0.00
869 3 0.00
870 63 0.01
871 9 0.00
872 5 0.00
873 2 0.00
874 2 0.00
875 3 0.00
876 4 0.00
877 1 0.00
878 5 0.00
879 2 0.00
880 6 0.00
881 2 0.00
882 7 0.00
883 5 0.00
884 63 0.01
885 11 0.00
886 74 0.01
887 409 0.07
888 76 0.01
889 116 0.02
890 556 0.09
891 11 0.00
892 5 0.00
893 5 0.00
894 9 0.00
895 177 0.03
896 9 0.00
897 10 0.00
898 120 0.02
899 70 0.01
900 2 0.00
901 3 0.00
902 50 0.01
903 656 0.11
904 211 0.04
905 70 0.01
906 48 0.01
907 32 0.01
908 85 0.01
909 24 0.00
910 91 0.02
911 687 0.11
912 72 0.01
913 2 0.00
918 1 0.00
920 6 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (847 bp):
GACTCGGAATGAACTCCATATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCATGA
AACGAGCGTGCGGGCACTCAGTCGGCCAGAGGGCCGGGATGCGTAAGCCGAGGATCGATCGGGTC
CCCCTTTGCGTGCTACCCATCTTGCTACCGCAACCCTTGGTCGGTCCAATCTTAGACTGGGAATG
AACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGGCGGGGGGCGGGCGGACACTACGCGGCCA
GAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
TTGCGTGCCAATGCCATTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA
AGTTTCATGGCAAGATGACTCGTTTCTACTTTTTCACATTTTAAAACTTTTTGCGGTTCGGGATT
TTTTAAAATTTTTTAGAAGGAGTTTTGGCCCCAAACTTGGTAGCCGTGATCCTTGTATTTTTGTT
GGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTT
AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATAAGGGCCAAGTACCAGCAC
CCATCGCACATCATGTGCGCACACCCCCCAGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGT
CAGGTTCTACGATGATGCTCCGACGATGGTGCCTCGGCATAAAAAAATGTGGCACCAGCACATGC
TG
Found at i:4948910 original size:26 final size:25
Alignment explanation
Indices: 4948873--4948927 Score: 92
Period size: 26 Copynumber: 2.2 Consensus size: 25
4948863 GCACCAGCAC
4948873 ATGCTTGACTGGGAATGAACTCTAT
1 ATGCTTGACTGGGAATGAACTCTAT
*
4948898 ATGCTTAGACTGGGAATGAACTCTGT
1 ATGCTT-GACTGGGAATGAACTCTAT
4948924 ATGC
1 ATGC
4948928 CTAAGTCAAC
Statistics
Matches: 28, Mismatches: 1, Indels: 1
0.93 0.03 0.03
Matches are distributed among these distances:
25 6 0.21
26 22 0.79
ACGTcount: A:0.27, C:0.16, G:0.25, T:0.31
Consensus pattern (25 bp):
ATGCTTGACTGGGAATGAACTCTAT
Found at i:4951993 original size:26 final size:27
Alignment explanation
Indices: 4951957--4952011 Score: 94
Period size: 26 Copynumber: 2.1 Consensus size: 27
4951947 CTGGTTCGAT
4951957 CTTAGACTGGGAATG-AACTCCATATG
1 CTTAGACTGGGAATGAAACTCCATATG
*
4951983 CTTAGACTGGGAATGAAACTCCGTATG
1 CTTAGACTGGGAATGAAACTCCATATG
4952010 CT
1 CT
4952012 AGGCCAACCG
Statistics
Matches: 27, Mismatches: 1, Indels: 1
0.93 0.03 0.03
Matches are distributed among these distances:
26 15 0.56
27 12 0.44
ACGTcount: A:0.29, C:0.20, G:0.24, T:0.27
Consensus pattern (27 bp):
CTTAGACTGGGAATGAAACTCCATATG
Found at i:4952731 original size:26 final size:26
Alignment explanation
Indices: 4952702--4952754 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4952692 CCCATCCGAT
*
4952702 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4952728 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4952754 C
1 C
4952755 CAATGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4953607 original size:26 final size:26
Alignment explanation
Indices: 4953578--4953630 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4953568 CCGGTTTGAT
*
4953578 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
4953604 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
4953630 C
1 C
4953631 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:4955440 original size:26 final size:26
Alignment explanation
Indices: 4955389--4955441 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
4955379 CCAGTCCGAT
** *
4955389 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTAAGAATGAACTACATATG
*
4955415 CTTAGACTAAGAATGAACTACGTATG
1 CTTAGACTAAGAATGAACTACATATG
4955441 C
1 C
4955442 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.34, C:0.19, G:0.21, T:0.26
Consensus pattern (26 bp):
CTTAGACTAAGAATGAACTACATATG
Found at i:4955784 original size:904 final size:903
Alignment explanation
Indices: 4951983--4956170 Score: 5264
Period size: 904 Copynumber: 4.7 Consensus size: 903
4951973 ACTCCATATG
* * *
4951983 CTTAGACTGGGAATGAAACTCCGTATG-CTAGGCCAACCGACGAAACGAGCGGGCGG-CGGACGG
1 CTTAGACTGGGAATG-AACTCCGTATGCCTAAGCCAA-CGACGAAACGAGTGGGCGGACGGGCGG
*
4952046 GCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT-GG
64 GCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGG
* * *
4952110 TTTAGGAACATCTTTCATATTTCTGCATGCCAATGCCATTTTTACGGCTTGTAAATTCATACAAT
129 TTTAGGCACATC-TTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * *
4952175 GGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCATTTTCTA-TTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTT
* * * * *
4952239 TGAAACTTTCTGCGGTTTGGGATTTTTTTAAAATTTTTTTGGAAGGATTTTTTGCCCCAAACTTG
258 TGAAACTTTTTGCGG-TTCGGAATTTTTTAAAATTTTTTTGGAAGGA-GTTTTGGCCCAAACTTG
* * * * *
4952304 GTAGACATCATCCTTGTATTTTTTTTGGCATGCACAAGAAAATTAAGCCAAAAATTCGAAGTGTA
321 GTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* * *
4952369 CAAGATTTTGTGACCATTCGAAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGACAGCA
386 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* * *
4952434 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCAAGGTTTGATGAGGCATAGGG
451 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* * *
4952499 GGCCAATATAAGGGCCAAGTACCTGCACCCATCACACATCATGTGTGCACACCCCCCCAGGCCCC
516 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCC-GGCCCC
* * * ** *
4952564 CCCGATTGCCGGAACCCTAATGCCATCGGTCAGGTTCTCCAATGATGCTCCGGTGATGGTGCCCC
580 CCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGATGATGGTGCCCC
* * * * *
4952629 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCTAGCATGTGCTACCGCAACCCTCGAACC
645 GATGAAGAAAAATGCAGCACCAGCACATGCTCGAGCCTAGCATGTGCTGCCGCAACCCTCGAATC
*
4952694 CA-TCCGATCTTAGGCTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC-A
710 CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * **
4952757 ATGTCAACCCATGAAACGAGCGTGTGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCTGG
775 A-GTCAACCCACGAAACGAGCGTGTGAGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCAG
* * * * * *
4952822 GGATCGGTCGGGTCCCCCTTTGTGTGCTGCCGATCCTGCTGCCGTAACCCTCAATCCGGTCTGAT
839 GGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCCGATCTGAT
* * * * *
4952887 CTTACACTGAGAATGAACTCCGTATGCCTAAG-CAACCATC-AAACGAGCGAGCCGG-C-GGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGA-CGAAACGAGTG-GGCGGACGGGCGG
* *
4952948 GCGGG-ACTACGCT-GCCAGAGAGACGGGATGCGC-AAGCGTGAATCGATA-GGTGG-AGGTGGG
64 GCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGG
* *** *
4953008 TTTAGGCACATCTTTATATTTCTGTGTGCCAATTCCATTTTTA-GGCTTGTAAATTCATACAATG
129 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
4953072 GTCCTTTAAGCC-TCACGTGAAGTTTCAT-GCAAGACGACTC-GTTTCTA-TTTTCATGA-TTTC
194 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTT
* * * *
4953132 AAAAC-TTTTGCGGTTCAGG-A-TTTTCAAAA-TTTTTTGGAAGGTGTTTTCG-CCAAACTTGGT
259 GAAACTTTTTGCGGTTC-GGAATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCAAACTTGGT
* *
4953192 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTTCAGCTAAAAACTCGATGTCTAC
323 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA-TTCAGCTAAAAACTCGAAGTGTAC
*
4953257 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTCAATGGCTACTGGCAAG-A
387 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC-AGCA
* *
4953321 AACTTGTAAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAAGA-GGATAGG
451 AACCTGT-AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
*
4953385 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCTCCCCGGCCC
515 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCCGGCCC
* *
4953450 CCCCGATCGCCGGAACCCCAATGTCGTCGGTCAGGTTCT-C--C---G----G-TGATGGTACCC
579 CCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGATGATGGTGCCC
* * * *
4953504 CGGTGAAGAAAAATGCGGCTCCAGCACATGC-CTGAGCCTTGCATGTGCTGCCGCAACCCTC-AA
644 CGATGAAGAAAAATGCAGCACCAGCACATGCTC-GAGCCTAGCATGTGCTGCCGCAACCCTCGAA
* ** *
4953567 TCCGGTTTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCC
708 TCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * * *
4953632 TAAGTCAACCCACGAAATGAACGTG-CAGGCACTCAGCCTGCCAGAGGGGTGGGATGCGCAAGCC
773 TAAGTCAACCCACGAAACGAGCGTGTGA-GCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCC
* ** * * * * *
4953696 AGGGATCGGTTGGGTCTACATCTACGTGCTACCGATCCTACTGCCGCAACCCTTAGTCC-AGTCA
837 AGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCCGA-TCT
4953760 GAT
901 GAT
* *
4953763 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGACGAAACAAGTGGGC-GAGCGAGCGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC-GACGAAACGAGTGGGCGGA-CGGGCGG
* * * * *
4953827 GCAGGTACTACG-TCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGCTGG
64 GCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGG
*
4953891 GTTTAGGCACATCTTCATATTTCTACATGCCAATGCTATTTTTATGGCTTGTAAATTCATACAAT
128 GTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*
4953956 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-AGCTCGTTTTCTATTTTTCATGATTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-CTCATTTTCTATTTTTCATGATTT
* * * * * * *
4954020 TTGAAAGTTTGTACGGTTCGGGATTTTTTTAAATTTTTTTTGAAAGAGTTTTGGCCCCAAACTTG
257 TTGAAACTTTTTGCGGTTCGGAATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG-CCCAAACTTG
** * * *
4954085 GTAGATGTGATCCTTGTATTTTTTTTGGCATGCAC-AGAAAATTGAAGCTAAAAAGTCGAAGTGT
321 GTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATT-CAGCTAAAAACTCGAAGTGT
*
4954149 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAGC
385 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
4954214 AAACCTATAAAATCTCAATTTGCTC-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATTAGGGATAG
450 AAACCTGTAAAATCTCAA-ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
* *
4954278 GGGGCCAATATAAGGGCCAAGCACCAGCACCCCATCGCACATCATGTACGCACACCCCCCCGGCC
514 GGGGCCAATATAAGGGCCAAGTACCAGCA-CCCATCGCACATCATGTGCGCACACCCCCCCGGCC
* ** ** *
4954343 CCTCCGATCTTCGGAACCCTGATGCCGTCGGTCAGGTTCTCCGGC-ATGGCCTCCGATTGATGGT
578 CCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGAT-G-CTCCGA-TGATGGT
* * * * *
4954407 GACCCGATGAAGAAAAATGCGAGCACCAGCAAATG-TCCAAGCCCAGCATTGTGCTGCGGCAACC
640 GCCCCGATGAAGAAAAATGC-AGCACCAGCACATGCT-CGAGCCTAGCA-TGTGCTGCCGCAACC
** * * * *
4954471 CTCGCGTCTAGTCTGATATTAG-CT-GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTG
702 CTCGAATCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
4954534 TATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGCGCTCAGCTGGCCAGAGGGGC-AGGATGCG
767 TATGCCTAAGTCAACCCACGAAACGAGCGTGTGAGCGCTCAGCCGGCCAGAGGGGCGA-GATGCG
* * *** * *
4954598 TAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTACTACCGATCCTGCTGCTATAACCCTCGGTCT
831 CAAGCCAGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCC
* **
4954663 GGTCCAAT
896 GATCTGAT
* * *
4954671 CTTAGACTGGGAATGAACTCGGTATGCCTAAGCCGACAGACGAAATGAGTGGGCGGGTA-GGGC-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC-GACGAAACGAGTGGGC-GG-ACGGGCG
* * * * * *
4954734 GGCGGGCACTATGCCGGCCAGAGAGACAGGATGCGTAAATCGTGGATCGATAGGGTGGTAGCTGG
63 GGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGG
* * * * *** *
4954799 GTTTTGGAAAATCTTTATATTTCTATGCGCCAATGCCATTTTTTTGGCTTGTAAATTCATACAAT
128 GTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
** * * *
4954864 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGATAAGATGACTCATTTTTTATTTTTCACGATTTT
193 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTT
* * * * **
4954929 TGAAACTTTTTGTGGTTCAGAATTTTCTAAACTTTTTTCAGAAGGCA-TTTTGGCCCAAACTTGG
258 TGAAACTTTTTGCGGTTCGGAATTTTTTAAAATTTTTTTGGAAGG-AGTTTTGGCCCAAACTTGG
*
4954993 TAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAACACTCGAAGTGTAC
322 TAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTAC
* * * * * *
4955058 AACATTTTGTGACAATTTGAAAAAGGTGTCCCTATTCCAGACACTTTAATGGCCACTGGCAGCAA
387 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
*
4955123 ACCTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
452 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * *
4955188 GCCAATATAAGGGCCAAGTACAAGCACCCATTGCACATCATGTGCGCACACCCCCCCGGCCCGCC
517 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC
** * * *
4955253 CGATCGTTGGAACCCCAATGTCGCCGGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCCCGA
582 CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGATGATGGTGCCCCGA
* * * *
4955318 TGAAGAAAAATGCACCACCAGCACGTGCTCGAGCAC-AACATGTGCTGCCGCAACCCTC-ATTCC
647 TGAAGAAAAATGCAGCACCAGCACATGCTCGAGC-CTAGCATGTGCTGCCGCAACCCTCGAATCC
* ** *
4955381 AGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTAAGAATGAACTACGTATGCCTAA
711 AGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * ** ** *
4955446 GTCAACCAACGAAATGAGCGTGTGAGCGCTCAGCCAACCAGAGGGGCGAGATGAAACAAGTC-GA
776 GTCAACCCACGAAACGAGCGTGTGAGCGCTCAGCCGGCCAGAGGGGCGAGATG-CGCAAGCCAG-
* * * * *
4955510 GGATCGGTTGGGTCCCCCTCTGTGTGCTATCGATCCTGCTACTGCAACCCTCAGTCCGATCTGAT
839 GGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCCGATCTGAT
* * *
4955575 CTTAGACTGGGAATGACCTTCGTATGCCTAAGCCAATCGACGAAACGAGTAGGCGGACGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA-CGACGAAACGAGTGGGCGGACGGGCGGG
* * * * * *
4955640 TGGGCTCTACGCTGGCCAAAGAAATGGGATGCGCAAACCATGGATCGATAGGGTGGTAGGTGGGT
65 CGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGGT
*
4955705 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTGTTATGGCTTGTAAATTCATACAATGG
130 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
4955770 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGA-TTTTC
195 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTG
* * * *
4955834 AAAATGTTTTGCGGTTCGGGATTTTTTAAAATTTTTTTGGAAAGAGTTTTGGCCTCGAACTTGGT
260 AAACT-TTTTGCGGTTCGGAATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCC-CAAACTTGGT
* * * *
4955899 A-ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCGGCTAAAAACACGAAGTGTACA
323 AGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* * *
4955963 AGACTTTGTGACCATTTGAAAAAAGTGTCCCCATTACTGACACTTTAATGGCTACTGGCAGCAAA
388 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
*
4956028 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGATATGGGG
453 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
4956092 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCCAC-GCCCCCC
518 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-CGGCCCCCC
* *
4956156 AG-TCGCCAGAACCCC
582 CGATCGCCGGAACCCC
4956171 TCGGTCCGGT
Statistics
Matches: 2827, Mismatches: 369, Indels: 178
0.84 0.11 0.05
Matches are distributed among these distances:
875 5 0.00
876 252 0.09
877 10 0.00
878 9 0.00
879 9 0.00
880 6 0.00
881 21 0.01
882 11 0.00
883 5 0.00
884 43 0.02
885 32 0.01
886 67 0.02
887 193 0.07
888 70 0.02
889 17 0.01
890 10 0.00
891 19 0.01
892 14 0.00
893 74 0.03
894 179 0.06
895 86 0.03
896 33 0.01
897 32 0.01
898 18 0.01
899 12 0.00
900 21 0.01
901 21 0.01
902 50 0.02
903 208 0.07
904 518 0.18
905 18 0.01
906 75 0.03
907 225 0.08
908 425 0.15
909 25 0.01
910 13 0.00
911 1 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (903 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACGACGAAACGAGTGGGCGGACGGGCGGGC
GGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGA
AACTTTTTGCGGTTCGGAATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCAAACTTGGTAGA
CATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGAT
CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGATGATGGTGCCCCGATGAA
GAAAAATGCAGCACCAGCACATGCTCGAGCCTAGCATGTGCTGCCGCAACCCTCGAATCCAGTCC
GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
CCCACGAAACGAGCGTGTGAGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGCCAGGGATCGG
TCGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCCGCAACCCTCAGTCCGATCTGAT
Found at i:4956215 original size:26 final size:26
Alignment explanation
Indices: 4956186--4956238 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4956176 CCGGTCTAAT
*
4956186 CTTAGTCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
4956212 CTTAGACTGGGATTGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4956238 C
1 C
4956239 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.23, C:0.19, G:0.26, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4957006 original size:26 final size:26
Alignment explanation
Indices: 4956970--4957022 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4956960 CCGGTCCAAT
*
4956970 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
**
4956996 CTTAGACTGGGTGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4957022 C
1 C
4957023 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.23, C:0.19, G:0.28, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4957905 original size:26 final size:26
Alignment explanation
Indices: 4957869--4957924 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
4957859 CCGATCCAAT
* *
4957869 CTTAGACTGGGAATGAACTCTGTACG
1 CTTAGAATGGGAATGAACTCCGTACG
*
4957895 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTACG
4957921 CTTA
1 CTTA
4957925 AGTCAACAAA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTACG
Found at i:4959542 original size:26 final size:26
Alignment explanation
Indices: 4959506--4959561 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
4959496 CCGATCCAAT
* *
4959506 CTTAGACTGGGAATGAACTCTGTACG
1 CTTAGAATGGGAATGAACTCCGTACG
*
4959532 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTACG
4959558 CTTA
1 CTTA
4959562 AGTCAACAAA
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.29
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTACG
Found at i:4960303 original size:26 final size:26
Alignment explanation
Indices: 4960267--4960320 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
4960257 CCGGTCCGAT
* *
4960267 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAAGGAACTCCATATG
*
4960293 CTTAGACTGGGAAGGAACTCCGTATG
1 CTTAGACTGGGAAGGAACTCCATATG
4960319 CT
1 CT
4960321 AAGTTAACCG
Statistics
Matches: 25, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAAGGAACTCCATATG
Found at i:4960407 original size:760 final size:762
Alignment explanation
Indices: 4958926--4960413 Score: 2184
Period size: 760 Copynumber: 2.0 Consensus size: 762
4958916 GTTTAGGCAC
* *
4958926 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCTCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAA
* * *
4958991 GCCTTCACGTGATGTTTCATGGCAAGACAACTCGTTTTCTATTTTTTATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
** * * * * *
4959056 TGGGGTTCGAGATTTTTTTAAATTTTTTCGAAATGATTTTTGTCCCCAAACTTGGTATACGTGAT
131 TACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTT-GTAGACGTGAT
* * * * *
4959121 CCTTTTATTTTTTTTGGCATGCACAAAAAATTTCATCTAAAAACGCGAAGTGTACACGATTTTGT
195 CCTTGTATATTTGTTGGCATGCACAAAAAAATTCATCTAAAAACGCGAAGTGTACAAGATTTTGT
* *
4959186 GACCATTTGAAAAAATTGTCCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
260 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
4959251 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
325 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAA
* * *
4959316 GGGCCAAGTACAAACACCCATCGCACATCATGTGCCCACACCCCTCGGCCCCCCCGATCATCGTA
390 GGGCCAAGTACAAACACCCATCGCACATCATGTGCCCACACCCCCCGGCCCCCCCGATCACCGAA
* * * *
4959381 ACCCAAATGCCGCCTGTCAAGTTCTCTAGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAAT
455 ACCCAAATACCGCCGGTCAAGTTCTCTAGCGATGCTCCGACGATGGTGCCCCAACAAAGAAAAAT
* * *
4959446 GCGGCACCAGCACTTGCCTGAGCCCAGCATGTGCTGTCGCAACACTCGGTCCGATCCAATCTTAG
520 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAAAACTCGGTCCGATCCAATCTTAG
** *
4959511 ACTGGGAATGAACTCTGTACGCTTAGAATGGGAATGAACTCCGTATGCTTAAGTCAACAAACGAA
585 ACTGGGAATGAACTCCATACGCTTAGAATGGGAAGGAACTCCGTATGCTTAAGTCAACAAACGAA
* * * * * * *
4959576 ATGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGGGATCGGTCAGGTCC
650 ATGAGCATGCAGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCAGCGATCGATCAGGTCA
4959641 CCCTCTATGTGCTGTCGATGCTACTATCATAAGCCTCAGTCCAGTCTG
715 CCCTCTATGTGCTGTCGATGCTACTATCATAAGCCTCAGTCCAGTCTG
*
4959689 ATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAA
*
4959754 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * *
4959819 TACGGTTCGAGGTTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCTAAAC-T-TAGACGTGATC
131 TACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGTAGACGTGATC
* * *
4959882 CTTGTATATTTGTTGGCTTGCACAAAAAAATTCATTTAAAAACTCGAAGTGTACAAGATTTTGTG
196 CTTGTATATTTGTTGGCATGCACAAAAAAATTCATCTAAAAACGCGAAGTGTACAAGATTTTGTG
4959947 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
261 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
4960012 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAAG
326 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAAG
* * * * * *
4960077 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACATCCCCCCTTG-CCCCCTGATCGCCGA
391 GGCCAAGTACAAACACCCATCGCACATCATGTGCCCACA-CCCCCC-GGCCCCCCCGATCACCGA
* * *
4960141 AACCTC-AATACCGCCGGTCAGGTTCT-TCGGCGATGCTCTC-ACGATGGTGCCCCAACGAAGAA
454 AACC-CAAATACCGCCGGTCAAGTTCTCT-AGCGATGCTC-CGACGATGGTGCCCCAACAAAGAA
* * * * *
4960203 AAATGCGTCACCAGCACATGCCCGAGTCCAGCATGTGCTG-C-CATAAACCTCTGTCCGGTCCGA
516 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCA-AAA-CTCGGTCCGATCCAA
* * * * *
4960266 TCTTAGATTGGGAATGAACTCCATATGCTTAGACTGGGAAGGAACTCCGTATGC-TAAGTTAACC
579 TCTTAGACTGGGAATGAACTCCATACGCTTAGAATGGGAAGGAACTCCGTATGCTTAAGTCAACA
* * * *
4960330 GATGAAATGAGCATGCGGGCGCTCAGCTAGCCAGAGGGGCGGGATGCGCAAGCCAGCGATCGATC
644 AACGAAATGAGCATGCAGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCAGCGATCGATC
*
4960395 GGGTCACCCTCTATGTGCT
709 AGGTCACCCTCTATGTGCT
4960414 ACCAATCCTG
Statistics
Matches: 645, Mismatches: 73, Indels: 17
0.88 0.10 0.02
Matches are distributed among these distances:
759 2 0.00
760 313 0.49
761 161 0.25
762 4 0.01
763 165 0.26
ACGTcount: A:0.26, C:0.24, G:0.22, T:0.28
Consensus pattern (762 bp):
ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAA
GCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
TACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTGGCCCCAAACTTGTAGACGTGATC
CTTGTATATTTGTTGGCATGCACAAAAAAATTCATCTAAAAACGCGAAGTGTACAAGATTTTGTG
ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAAG
GGCCAAGTACAAACACCCATCGCACATCATGTGCCCACACCCCCCGGCCCCCCCGATCACCGAAA
CCCAAATACCGCCGGTCAAGTTCTCTAGCGATGCTCCGACGATGGTGCCCCAACAAAGAAAAATG
CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAAAACTCGGTCCGATCCAATCTTAGA
CTGGGAATGAACTCCATACGCTTAGAATGGGAAGGAACTCCGTATGCTTAAGTCAACAAACGAAA
TGAGCATGCAGGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGCCAGCGATCGATCAGGTCAC
CCTCTATGTGCTGTCGATGCTACTATCATAAGCCTCAGTCCAGTCTG
Found at i:4962084 original size:26 final size:26
Alignment explanation
Indices: 4962045--4962097 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4962035 CCAGTCTAAT
4962045 CTTAGACTGAGAATGAACTACGTATG
1 CTTAGACTGAGAATGAACTACGTATG
* *
4962071 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTACGTATG
4962097 C
1 C
4962098 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTACGTATG
Found at i:4962972 original size:26 final size:26
Alignment explanation
Indices: 4962943--4962995 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
4962933 CTGGTCCGAT
* *
4962943 CTTAGACTGGGAAAGAACTCCGTATG
1 CTTAGAATGGGAAAGAACTCCGCATG
*
4962969 CTTAGAATGGGAATGAACTCCGCATG
1 CTTAGAATGGGAAAGAACTCCGCATG
4962995 C
1 C
4962996 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.21, G:0.26, T:0.23
Consensus pattern (26 bp):
CTTAGAATGGGAAAGAACTCCGCATG
Found at i:4963161 original size:898 final size:896
Alignment explanation
Indices: 4959689--4964744 Score: 6887
Period size: 898 Copynumber: 5.7 Consensus size: 896
4959679 GTCCAGTCTG
** *
4959689 ATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
4959754 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * * *
4959819 TACGGTTCGAGGTTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCTAAAC-T--TAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * **
4959881 CCTTGTATATTTGTTGGCTTGCACAAAAAAATTCATTTAAAAACTCGAAGTGTACAAGATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
4959946 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
4960011 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * *
4960076 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACATCCCCCCTTGCCCCCTGATCGCCGA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GGCCCCCCGATCGTCGA
* * * * *
4960141 AACCTCAATACCGCCGGTCAGGTTCTTCGGCGATGCTCTC-ACGATGGTGCCCCAACGAAGAAAA
454 AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC-CGGCGATGGTGCCCCGACGAAGAAAA
* * * * * *
4960205 ATGCGTCACCAGCACATGCCCGAGTCCAGCATGTGCTGCCATAAACCTCTGTCCGGTCCGATCTT
518 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTT
* * * * * *
4960270 AGATTGGGAATGAACTCCATATGCTTAGACTGGGAAGGAACTCCGTATG-CTAAGTTAACCGATG
583 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* ** *
4960334 AAATGAGCATGCGGGCGCTCAGCTAGCCAGAGGGGCGGGATGCGCAAGCCAGCGATCGATCGGGT
648 AAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG-TCGGGT
* * * * * *
4960399 CACCCTCTATGTGCTACCAATCCTGCTGCCGCAACCCTTGGTCCGGTCCGATCTTAGACAGGGAA
712 CCCCCTCTATGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAA
* * *
4960464 TGAACTCCGTATGCCTAAGCCAATTGACGAAACGAGCGGGCGGGCAGACGGGCACTACGCCGGCC
777 TGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGC-GGCGGGCGGGCACTACGCCGGCC
* * * *
4960529 GGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTTGGTGTAGGCAC
841 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * *
4960585 ATCTTCATATTTCTGCATGACAATGCCATTTTTATGGCTTCTACATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
4960650 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGACTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
** * *
4960715 TGCGGTTCGAGGGTTTTTAAAATTTTTTCGGAAGGTGTTTTGGCCCCAAAC-T--TAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* ** * * *
4960777 CCTTGTATTTTTGTTGGCATGGACAAAAAAATTCATTTCAAAACTCGGAGTGTACAAAATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
4960842 GACCATTCGAAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
4960907 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
4960972 GGGCCAAGTACCAGCACCCATCG--CA-CA--T-----C-CCCCCCGGCCCCCCGATCGTCGAAA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAA
* * * *
4961026 CCTCAATACCGCCGGTCAGGTTCTTCGGCGATGCTCTC-GCGATGGTGCCCCGACGAAGAGAAAT
456 CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTC-CGGCGATGGTGCCCCGACGAAGAAAAAT
* * * * * *
4961090 GCGTCACCAGCACATGCCCGAGTCCAGCATGTGCTGCCATAAACCTCTGTCCGGTCCGATCTTAG
520 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTAG
* * * * *
4961155 ATTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTTAACCGACGAA
585 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * ** * *
4961220 ATGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGAATGCTTAAGCCAGTGATCGGTCGGGTCG
650 ATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC-GTCGGGTCC
* * * * *
4961285 CCCTCTGTATGCTACTGATCCTGCTGCCGCAACCCTTGGTCCGGTCTGATCTTAGACTGGGAATG
714 CCCTCTATGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATG
* * * * * * * *
4961350 AACTTCGTATGGCTAAGCCAACCGGCAAAATGAGC--G-GGCGGGCGGGCACTACGTCGGCCATA
779 AACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGA
** * **
4961412 GAGATAGGATACGCAAGCCGTGGATCGATAGGGTGACAGGTGGGTTTAGGCAC
844 GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*** * *
4961465 ATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAACTCATACAATGGCCCCTTAA
1 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * *
4961530 GCCTTCACGTGAAGTTTCATGGCAAGAAGACTCATTTTCTATTTTTCATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* *
4961595 TGCGGTTCTG-GATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACTTGA
131 TGCGGTTC-GAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * *
4961659 T-CTTGTATTTTTTTTGGGATGCACAAAAAAATTCAGCTAAAAACTCGAAGTTTACAAGATTTTG
195 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* *
4961723 TGACCATTTGAAAAATGTTTCCCCATTTC-GAACACTTTAATGGCTACTGGCAGCAAACCTGTAA
260 TGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAA
* *
4961787 AATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
324 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATAT
*
4961852 AAGGGCCAAGTACCAGCATCCATCGCACATCATGTGCGCACAGCCCCCCCGGCACCCCCGATCGT
389 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGGC-CCCCCGATCGT
* *
4961917 CGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAA
451 CGAAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAA
* * * **
4961982 AAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCT-GCACAACCCTCGGTCCAGTCTAATC
516 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATC
* *
4962046 TTAGACTGAGAATGAACTACGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
581 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * *
4962111 CGAAATGAGCGTGCGGGCACTCTGCCGGCTAGAGGGGTGGAATGCGTAAGCCAGGGATCGATCGG
646 CGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCG-TCGG
*
4962176 GTCCCCCTCTATGTGCTACCGATCCTGCTGCCGTAACCCTCGGTCTGGT-TCGATCTTAGACTGG
710 GTCCCCCTCTATGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCT-GATCTTAGACTGG
*
4962240 GAATGAACTCCGTATGCCTAAGCCAGTCGACGAAACGAGCGGGCAGGCGGGCGGGCACTACGCCG
774 GAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGC-GGCGGGCGGGCACTACGCCG
* * *
4962305 GCTAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCAC
838 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*
4962364 ATCTTCATATTTCTGCATGCCAATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * ** *
4962429 GCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTTTATTTTTCGTGATTTTTGAAATTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
** ** *
4962494 TGCAATTCGAGATATTTTT-AAATTTTTTTGGAAGGGGTTTTGGCCCCAAACTTGGTAGACGTGA
131 TGCGGTTCGAGAT-TTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * * * * *
4962558 TCCTTGTATTTTAGTTGGTATGCATAAAAAAAAGTCAGCTAAAAACTCAAAGTGTACAACATTTT
195 TCCTTGTATTTTTGTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTT
* *
4962623 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGTTATTGGCAGCAAACCTGTAA
259 GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
** *
4962688 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAC
324 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATAT
* * * *
4962753 AAGGGCCTACTACCAGCACCCATCGCACATCACGTGCGCACA-CCCCCGGCCCCCCGATCGTCGG
389 AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGA
* * * * * *
4962817 AACCCCAATGCCGCCTGTTAGGTTCTCTGGCAATGCTCAGGCGATGGTGCCCCGGCGAAGAAAAA
454 AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAA
* * *
4962882 TGTGGCACCGGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCTGGTCCGATCTTA
519 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTA
* * *
4962947 GACTGGGAAAGAACTCCGTATGCTTAGAATGGGAATGAACTCCGCATGCCTAAGTCAACCCACGA
584 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * *
4963012 AATGAGCGTGCGGGCGCTAAGTCGGCTAGAGGGGCGGGATGTGCAAGCCAGGGATCAGTCGGGTC
649 AATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC-GTCGGGTC
* * *** * *
4963077 CCCCTCTATGTGCTGCCGATCCTACTATAGTAACCCTCGGTCTGGTCTAATCTTAGACTGGGAAT
713 CCCCTCTATGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
* * *
4963142 GAACTCCGTACGCCTAAGCCAATCGACGAAATGATCGGGCGGACGGGCGGGCACTACGCCGGCCA
778 GAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGG-CGGGCGGGCACTACGCCGGCCA
* *
4963207 GAGAGACGGGATGCGTAACCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
842 GAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * *
4963262 ATCTTCATATTTTTGCATTCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
4963327 GCCTTTACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
* * * * *
4963392 TTCGGTTC-AGGAGTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAAACATGA
131 TGCGGTTCGA-GATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
** * *
4963456 TTGTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTGCAAGATTTTG
195 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* **
4963521 TGACCGTTTGAAAAAAGTAACCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
260 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
4963586 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGGTAGGGGGCCAATATA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATA
*
4963651 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCTGATCGCCGA
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGTCGA
* * * *
4963716 AACCCCAATGCCGTCAGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAG--AAA
454 AACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAA
* * * * * *
4963779 ------A--A--A-ATG-GC-A--CCAGCATGTGCTACCGCAACCCTCAGTCCAGTTCAATCTTA
519 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTA
* * * *
4963829 GACTGGGAATGAACTTCGTATGCTTTGACTGGTAATGAACTCCGTATGCCTAAGTCAACCCACAA
584 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * *
4963894 AACGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGTCAGGGATCGGTCGGGTC
649 AATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATC-GTCGGGTC
* * * * * * ** *
4963959 CCCCT-T-TGCATGCTGCTGATCTTGCTGGCGCAACCCTAGGTCTCGTCCAATCTTAGACTCGGA
713 CCCCTCTATG--TGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGA
* * * * * *
4964022 ATGAACTCCGTATGCCGAAG-TAAGCTGACGAAACGAAC--G-GACGGGCGGGCACTACGTCGGC
776 ATGAACTCCGTATGCCTAAGCCAATC-GACGAAACGAGCGGGCGGCGGGCGGGCACTACGCCGGC
* * *
4964083 CAGAGAGACGGGATGCGCAAGCTGTGGATCGATGGGGTGGCAGGTGGGTTTAGGCAC
840 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
** *
4964140 ATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCATGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * **
4964205 GCCTTCACATGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACGATTTTCAAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
** * * *
4964270 TATGGTTCGAGATTTTTTAAAATTTTTTCAGAA-GATTTTTGGCCCCAAACTTTGTAGTCGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* *
4964334 CCTTGTATTTTTGTTGGCAAGCACAAAAAAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* * * *
4964399 GACCCTTTGAAAAAAGTGTCGCCATTTCAGACACTTTAATTGCTACTGTCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
4964464 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGGTAGGGGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * *
4964529 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCCCACACCCCCCGGGCCCCCGATCG-CTGGA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTC-GAA
* * *
4964593 ACCCTAATGCAGCTC-GTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAA
455 ACCCCAATGCCGC-CGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAA
* * * * * *
4964657 TGCGACACCAGCACATGCCCGAGCCTAGCATGTACTACCGCAACCCTCGATCTGGTCCGATCTTA
519 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTA
* *
4964722 GACTGGGAATGAATTTCGTATGC
584 GACTGGGAATGAACTCCGTATGC
4964745 CTAAGCTAGA
Statistics
Matches: 3714, Mismatches: 382, Indels: 131
0.88 0.09 0.03
Matches are distributed among these distances:
875 1 0.00
876 58 0.02
877 261 0.07
878 220 0.06
879 2 0.00
880 232 0.06
881 7 0.00
882 424 0.11
883 196 0.05
884 167 0.04
885 4 0.00
886 5 0.00
887 2 0.00
888 1 0.00
889 3 0.00
890 1 0.00
891 3 0.00
892 1 0.00
893 57 0.02
894 4 0.00
895 230 0.06
896 495 0.13
897 311 0.08
898 512 0.14
899 298 0.08
900 24 0.01
901 194 0.05
902 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
TGCGGTTCGAGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGAAA
CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATG
CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCACAACCCTCGGTCCGGTCCGATCTTAGA
CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
TGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGTCGGGTCCCC
CTCTATGTGCTACCGATCCTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAA
CTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGA
GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
Found at i:4968553 original size:904 final size:899
Alignment explanation
Indices: 4964752--4972598 Score: 9772
Period size: 904 Copynumber: 8.9 Consensus size: 899
4964742 TGCCTAAGCT
* * * * *
4964752 AGAGGGGCGGGATGCGCAAGTCGGGGATCG-GTCGGGTCCCCCTCTGCGTGCTACCGATCCTACT
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
* * ** * *
4964816 GCCGCAACTCTCAGTCTAGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
66 GCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCAA
* ** * ** *
4964881 TG-AA--A-CGAGCGGAC---C-GGCAAGCACTACGTCGGTAAGAGAGACGGGATGCGCAAGCTA
131 CGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
* **
4964938 TGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
196 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
* *
4965003 TATGG-TGTGTAAATTCATACAATGCTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACGAC
261 TATGGCT-TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * * *
4965067 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTTTTTTGA
325 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG
* * *
4965132 AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATGCTTGTATTTTTGTTGGCGTGCACAAAAAAT
390 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-
* * **
4965197 TTCATCTAAAAA-TGCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTTACCATTTCAG
454 TTCAGCTAAAAACT-CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * * *
4965261 AAACTTTAATTGCTAC-GGTTAGCAAACCTATAAAATCTCAAATGCTCCTTAAGGGGGTGTGAGT
518 ACACTTTAATGGCTACTGG-CAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
4965325 TCTTGTGGTTTGTTGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
582 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
***
4965390 ATGTGCGCACACCACCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCTTTGGTCAGG---T--
647 ATGTGCGCACACC-CCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * *
4965449 -----T-CTCCGACGATGGTGCCCTGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
711 GACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAG
* * *
4965508 CATGTGCTGCCGCAA-CC-C-TC--T--ATC-----C--G--G-TCT--G-AT-CTTATACTGGG
776 CATGTGCTGCTGCAACCCTCGTCGATCCATCTTAGACTGGAAGAACTACGTATGCTTAGACTGGG
* *
4965552 AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGGC
841 AATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * *
4965611 AGAGGGGCGGGATGCGCAAGCCGGGGATCG-GTCGGGTCCCCCTCTGCGTGCTGCCGATCCTACT
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
* ** *
4965675 GCCGCAACCCTCACTCCAGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAAACAA
66 GCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCAA
*
4965740 CGAAACGAGC--G-GG-CGGGCGGGCGGGCACTACGCCGGCCAGAG-GACGGGATGCGCAAGCCG
131 CGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
* *
4965800 TGGATCGATAGGGTGGTAGATGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCAATTT
196 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
* *
4965865 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGATGACT
261 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
**
4965930 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCAAA
326 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
*
4965995 AGGAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAAT
391 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AAT
4966060 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
455 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
** *
4966125 ACTTTAATGGCTACTGGCAGCAAAATTGAAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
520 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * *
4966190 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGTACATAATG
585 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * * * *
4966255 TCCGTACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATACCGTCGGTCAGG---T------
650 TGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACG
* *** * *
4966310 -T-CTCCGACGATGGTGCCCTGACAAAGAAAAATGTGGCACCAGCACTTGCCCGAGCCTAGCATG
715 ATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * * *
4966373 TGCTGCCGCAACCCTCAGTCTGGTTCAATCTTAGATTGGGAATGAACTTCATATGCTTTGACTGG
780 TGCTGCTGCAACCCTC-GTC--GATCCATCTTAGACT-GGAA-GAACTACGTATGCTTAGACTGG
* * * * *
4966438 TAACGAACTCCGTATGCCTAAGTCAACCCATGAAACG-GTCGTACGGGCGCTCAGCCGGCC
840 GAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAG-CGTGCGGGCGCTCAGCCGGCC
* * * * * * * *
4966498 AAAGGGGTGGGATGCGCAAGCCAGGGATCG-GTCGGGTCCCCCTCTACGTGCTACGGATCTTGCT
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
** * * * ** * * *
4966562 GGTGCAACCTTC-GATTTGGTCTAATCTTAGACTGGGAATGAACTCTGTATGCCAAAGCCAGCCG
66 GCCGCAACCCTCAG-TCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCA
* * * *
4966626 ACG-AA--A-TGATCGGA----CGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCT
130 ACGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
4966683 ATGGATCGATGGGGTGGCAGGTGGGTTTAGGCACATCTTTATATTTTTGTGTGCCAATGCCATTT
195 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTT
* * * * * *
4966748 TTATGGCGTGTAAATTCATACAATGGTTCCTTAATCCTGCACATGAAGTTTTATGGCAAGACGAC
260 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
4966813 TCGTTTTCTAATTTTCACGATTTTCAAAACTTTTTATGGTTCAAGATTTTTTAAAATTTCTTCGG
325 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG
* *
4966878 ATGGAGTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
390 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC-AAAAAA
* * *
4966943 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCCTTTGAAAAAAGTGTCGCCAGTTCAGA
454 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
4967008 CACTTTAATTGG-TACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
519 CACTTTAA-TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
4967072 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCATCGCACATCA
583 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * *
4967137 TGTGCGTACACCCCCCTCTGG-CCCCCCTATCACCGAAACCCCAATGTCGTCGGTCAGGTTCCCC
648 TGTGCGCACACCCCCC-C-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* ** * *
4967201 GACGATGCTCCCG-CGATGGTGCCTCGACGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCA
711 GACGATGCT-CCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCA
* * *
4967265 GCAAGTGCTGCTGTAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTACGTATGCTTAG
775 GCATGTGCTGCTGCAACCCTCG-TC-GATCC-ATCTTAGACT-GGAA-GAACTACGTATGCTTAG
* * * *
4967330 ACTAGGAATGAACTCTGTATCCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAGCCGGCC
835 ACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * *
4967395 AAAGGGGCGGGATGCGCAAGTCGGGGATCGGC-CAGGTCCCCCTCTGCGTGTTGTC-GATCCTGC
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTG-CAGATCCTGC
* * *
4967458 TGCCACAACCCTCAGT-TCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
65 TGCCGCAACCCTCAGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACC
* * * * * ** * *
4967522 AACAAAACGAGCGGGTGGGCGGGAGGGCGGGCACTACATCGGCTAGAGAGACGGGATGCACAAGC
129 AACGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * * * *
4967587 CATGGATCGGTAGGTTGATAGGTGGGTTTAGGCACATCATCATATTTCTATGTGCCAATGCCATT
194 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATT
* *
4967652 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTATCATGGCAAGATGA
259 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
4967717 CTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGTTTCAAGATTTTTTAAAATTTTTTCG
324 CTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCG
*
4967782 GAAGGAATTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAG
389 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-
* * *
4967847 ATTCAGCTAAAAACACGAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAA
453 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
4967912 ACACTTTAATGGCTACTGGAAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTT
518 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
4967977 CTCGGGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAACT
583 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * *
4968042 TGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGG
648 TGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGA
* ** * ** * *
4968107 CGATGCTCAGGTGATGGTACCCCGGCAAAGAAAACTGTGCCACCAGCACATGCCCGAGCCCAGCA
713 CGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCA
* * *
4968172 TGTGCTGGTGCAACCCTCGGTTCGATCCAATTTTATACTAGGAAAGAACTACGTATGCTTAGACT
778 TGTGCTGCTGCAACCCTC-G-TCGATCC-ATCTTAGACT-GG-AAGAACTACGTATGCTTAGACT
* * **
4968237 GGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCTAGCC
838 GGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * *
4968299 AAAGGGGCGGGATGCGCAAGCCGGGGCTCGACT-AGGTCCCCCTCTGTGTGCTGCAGATCCTGCT
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
* * *
4968363 ACCGCAACCCTCAGTCTGGCCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCAA
66 GCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCAA
* *
4968428 CGAAACGAGCGAGCGGACGGGCGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCA
131 CGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
* *
4968493 TGGATCGGTAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
196 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
* * *
4968558 TATGGCTTGTATATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACGTCT
261 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
4968623 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGA
326 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
** *
4968688 AGGAGTTTTCACCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATT
391 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA-T
* * *
4968753 TGAGCTGAAAGCAT-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
455 TCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* *
4968817 CACTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCTGTTTAAGGGGGTGTGAGTTC
519 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
4968882 TTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCAT
584 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * * *
4968947 GTGCGCACACACCCCCCCGCACCCCCCGATCGTCGGAACCCAAATTCCACCGGGCAGGTTCTCCG
649 GTGCGCACAC-CCCCCCGGC-CCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * * *** *
4969012 GCGAAGCTTCGGCGATGGTGCCCCGGTGAAGAAAAATGCACCACCAGCACATTCCCGAGCCCAGC
712 ACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGC
*** * * *
4969077 ATGTGCTGCCAAAACCCTCG--G-----TC-----C--G--G---TTCG-AT-CTTAAATTGGGA
777 ATGTGCTGCTGCAACCCTCGTCGATCCATCTTAGACTGGAAGAACTACGTATGCTTAGACTGGGA
* * * * * * *
4969121 ATGAACTCTGTATGCCAAAGTCAACCCACGAAATGAGCATGTGGCCTCTCAACCGGCC
842 ATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * * *
4969179 AGAGGGGCGGGATGCGCAAGTCGGGGATCG-GTTGGGTCCCCCTCTACGTGCTCCAGATCCTTCT
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
* * * ** *
4969243 GCCACAACCCTCGGT-TCGGTCTGATCTTAGACTAGGAATGAACTCTGTGTGCCTAAGCCAACCA
66 GCCGCAACCCTCAGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCA
* * * *
4969307 ACGAAACAAGCGGGCAAGCGGATGGGCGGGCGGGCACTACGTCGGCCAGAGAGATGGGATGCGCA
130 ACGAAACGAGC--G--AGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * ***
4969372 AGCCGTGGATCGATAGGGTGGTAGGTGGTTTTAGGCACGTCTTCATATTTCTACATGCCAATGCC
191 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCC
*
4969437 ATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
256 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
4969502 CGACTCGTTTTCTCTTTTTCCCGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
321 CGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
*
4969567 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCA-AAA
386 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * *
4969631 ACAATTCAGCTAAAAACTCTAAGTGTGCAAGATTTTGCGACCATTTG-AAAAAGTGTCGCCATTT
451 A-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
4969695 CAGACACTTTAATGGCTACTGGCAGCAAACGTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
515 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
4969760 GTTCTCGAGGTTCGATGAGGGATAGGCGGCCAATATAAGGGCCAAGTACCACCACCCATCGCACA
580 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * *
4969825 ACATGTGCGCGC-CCCCCCCGGCCCCCCCGATCGTCGGATCTCCAATGCCGCCGGTCAGGTTCTC
645 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
** * *
4969889 CGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCAGCACCAGCACTTGCCCAAGCCCA
710 CGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCA
** * *
4969954 GCATGTGCTGCCACAA--C-CGTAGAT-C--C---GA-T-------CT--G-AT-CTCAGACTGG
775 GCATGTGCTGCTGCAACCCTCGTCGATCCATCTTAGACTGGAAGAACTACGTATGCTTAGACTGG
* * * * *
4969998 GAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAGCATACGGGCGCTCAGTCGGCC
840 GAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * * *
4970058 AGAGGAGCGAG-TGCGTAAGCCGGGGATCGA-TCGGGTCCCCCTCTGCGTGCTGTAGATCTTGCT
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
* * * * *
4970121 ACCGCAACCCCCAGTCTGATCTGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCAACCGA
66 GCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCAA
* * * * * * *
4970185 CGAAATGAGCGGGCGGGCGGGTGGGCGGGAACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCG
131 CGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
* *
4970250 TGGATCGATAGGGTGGTAGGTCGGTTTAGGCACATCTTCATATTTCAGTGTGCCAATGCCATTTT
196 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
* *
4970315 TATGGCTTGTTAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGACT
261 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* * * *
4970380 CGTTTTCTATTTTTCATGATTTTCGAAACTTTTTACGGGTCGGGATTTTTTAAAATTTTTTCGGA
326 CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
* *
4970445 AGGAGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAACAT
391 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AT
* *
4970510 TCAGCCAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTC-GAA
455 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-A
* * * *
4970574 GACTTTAATGGCTATTGGCAGCAAACGTGTAAAATCCCAAATGCTCTTTAAGGGGGTGTGAGTTC
519 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
4970639 TCGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATGAT
584 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
4970704 GTGCG--CACCCCCCCGACCACTCCGATCGTCGGAACCCCAATGCCGCCGGTCAAGTTCTCCGAC
649 GTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGAC
* * * *
4970767 AATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATATAGCACCAGCACTTGCCCGAGCCCAGCAT
714 GATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAT
* * * * *
4970832 GTGCTACCGTAACCAT-G--G----ATC-T-GA-T-------C--CG-AT-CTCAGACTGGGAAT
779 GTGCTGCTGCAACCCTCGTCGATCCATCTTAGACTGGAAGAACTACGTATGCTTAGACTGGGAAT
* *
4970876 GAACTCTGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGCTTAGCCGGCC
844 GAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * *
4970932 AGAGGGGCGAGATACGCAAGCCGGGGATCGA-TCGGGTCCCCCTCTACGTGCTGTC-GATCCTGC
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTG-CAGATCCTGC
*** * ** *
4970995 TATTGTAACCCTCAGTCCAGTCTGATCTTAGACT-GGAATGAACTCCATATGCCTAAGCCAACCG
65 TGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCA
* * * * * *
4971059 ACGAAATGAGCGGGCGGGCGGGTGGGCGGGAACTACGCCGGCTAGAGAGACGGGATGCGCAAGCC
130 ACGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
4971124 GTGGATCGATAGGGTGGTAGGTCGGTTTAGGCACATCTTCATATTTCAGTGTGCCAATGCCATTT
195 ATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTT
* *
4971189 TTATGGCTTGTTAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCGTGGCAAGACGAC
260 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
4971254 TCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTACGGGTCGGGATTTTTTAAAATTTTTTCGG
325 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGG
*
4971319 AAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACA
390 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-A
* *
4971384 TTTAGCTAAAATCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTT-AG
454 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC-ATTTCAG
*
4971448 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTT
518 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * *
4971513 CTCGAGGTTTGACGAGGGACAAGGGGCCAATATAAGGGCCAAGTACCAGCACCTATCGCACATCA
583 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
*
4971578 TGTGCGCACATCCCCCCCCGGCCCCCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
648 TGTGCGCACA--CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* ** * ** * *
4971643 TACGATGCTCCGACGATGGTGCCTTGATGAAGAAAAAAATGGCACGAGCACATGCCCGAGTCCAG
711 GACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAG
* * *
4971708 CATGTGCTACTGCAACCCTCAGTTCGGTTCGATCTTAGACTGGGAATGAAC-ACTGTATGCTTAG
776 CATGTGCTGCTGCAACCCTC-G-TC-GATCCATCTTAGACT-GGAA-GAACTAC-GTATGCTTAG
* * **
4971772 ACT-GGAATGAACTCTATATGCCTAAGTCAACCCACGAAACAAGCGTGCGTACGCTCAGCCGGCC
835 ACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * *
4971836 AGAGGGGTGGGATGCGCAAGCTGGGGATCGACT-GGGTCCCCCTCT-CTGTGCTGCTGATCCTGC
1 AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGC-GTGCTGCAGATCCTGC
* * * ** * * *
4971899 TGTCGCAACCCTCGATTC-GATCCAATCGTAGACTGGGAATGAACTCTATATGCCTAAACCAACC
65 TGCCGCAACCCTC-AGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACC
* * * *
4971963 GACGAAACGAGCTA---G-TGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
129 AACGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * * *
4972024 CACGGATCGATAAGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTCTGTGCCAATGCCATT
194 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATT
* *
4972089 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCATCATGTGAAGTTTCATGGCAAGACGA
259 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * *
4972154 CTCATTTTTCTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
324 CTC-GTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTC
4972219 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAC
388 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-
* * *
4972284 AATTCAGCTCAAAACTCGAAGTGCACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCA
452 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
4972349 GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
517 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
4972414 TCTTGAGGTTTGATGAGGGATAGGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
582 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
4972479 ATGTGCGCACACCCCCCCGGCCCCCTCGATCTCAGGAACCCCAATGCCGCCGGTCAGGTTCT-C-
647 ATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
**
4972542 -C---G----G-CGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGC
712 ACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGC
4972598 A
777 A
4972599 CATGCCCGGT
Statistics
Matches: 6178, Mismatches: 646, Indels: 298
0.87 0.09 0.04
Matches are distributed among these distances:
859 121 0.02
860 11 0.00
861 105 0.02
862 433 0.07
863 26 0.00
865 2 0.00
869 1 0.00
871 3 0.00
873 281 0.05
874 249 0.04
875 749 0.12
876 8 0.00
877 39 0.01
878 70 0.01
879 299 0.05
880 184 0.03
881 5 0.00
882 154 0.02
883 65 0.01
884 721 0.12
885 14 0.00
886 39 0.01
887 171 0.03
888 1 0.00
889 50 0.01
890 2 0.00
891 3 0.00
892 1 0.00
894 1 0.00
896 7 0.00
897 254 0.04
898 8 0.00
899 1 0.00
900 49 0.01
901 171 0.03
902 310 0.05
903 10 0.00
904 932 0.15
905 522 0.08
906 106 0.02
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (899 bp):
AGAGGGGCGGGATGCGCAAGCCGGGGATCGACTCGGGTCCCCCTCTGCGTGCTGCAGATCCTGCT
GCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCAA
CGAAACGAGCGAGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
TGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTGCTGCAACCCTCGTCGATCCATCTTAGACTGGAAGAACTACGTATGCTTAGACTGGGAATGA
ACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
Found at i:4971791 original size:25 final size:26
Alignment explanation
Indices: 4971741--4971792 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
4971731 TCGGTTCGAT
*
4971741 CTTAGACTGGGAATGAACACTGTATG
1 CTTAGACTGGGAATGAACACTATATG
*
4971767 CTTAGACT-GGAATGAACTCTATATG
1 CTTAGACTGGGAATGAACACTATATG
4971792 C
1 C
4971793 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 16 0.67
26 8 0.33
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACTATATG
Found at i:4973234 original size:26 final size:26
Alignment explanation
Indices: 4973205--4973254 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
4973195 GTCTGATCTC
* *
4973205 AGACTGGGAATGAACTCTGTATGCTT
1 AGACAGGGAATGAACTCCGTATGCTT
4973231 AGACAGGGAATGAACTCCGTATGC
1 AGACAGGGAATGAACTCCGTATGC
4973255 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.18, G:0.28, T:0.24
Consensus pattern (26 bp):
AGACAGGGAATGAACTCCGTATGCTT
Found at i:4974131 original size:26 final size:26
Alignment explanation
Indices: 4974102--4974154 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4974092 CTGATCCGAT
4974102 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
4974128 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
4974154 C
1 C
4974155 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:4974374 original size:900 final size:898
Alignment explanation
Indices: 4972617--4978212 Score: 7135
Period size: 900 Copynumber: 6.3 Consensus size: 898
4972607 GTCACGTGAT
4972617 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * * *
4972682 GTTAAGCCTTCACGTGAAGTTTGATGGCAAGACGACTCGTTTTCTAATTTTCATGGTTTTTTAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* *
4972747 CTTTTTACGGTTCGAGATTTTTTAAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTGGA
131 CTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
4972812 CGTGATCCTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTGAAAACTCGAAGTGTACAAGA
195 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * *
4972877 TTTTGTGACAATTTGAAAAAAGTGTTCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCT
260 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
4972942 GTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGTGGTTTGATGAGGGATAGGGGGCCA
325 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
*
4973007 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCAGCCCCCCCGATCA
390 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCAG-CCCCCCGATCG
* * *
4973072 CCGGAACCCCAATGTCGCCAGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACGAAGA
454 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGTGCCC-GACGAAGA
* * * ** * * *
4973137 AAAATACGGCACCAGCACATGCCCGAGCCTAGCATCTGCTGTTGCAAACCT-TGGTCCGGTCTGA
517 AAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC-AACCTCCGGT-CGATCCGA
* * *
4973201 TCTCAGACTGGGAATGAACTCTGTATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCAACC
580 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * * * *
4973266 CACGAAACGAGCGGGCGGGCACTCA-ACGGGCTAGAGGGGTGGGATGCGCAAGCCGGGGATCGGC
645 CACGAAACGAGCGTGCGGGCGCTCAGTC-GGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGT
* ** * * * * * * *
4973330 CAGGTCCTTCTTTGCGTGCTGTCGATCCTGCTGCTACAACCTTCGATCTGGTCTGATCTTAGACT
709 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCTGATCAGATCTTAGACT
* * * * * * *
4973395 AGGAATGAACACCATACGCCTAAGTCAACCGACGAAACGAGCGGGTAGGCGGGCGGACGGGCACT
774 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACT
* * * *
4973460 ATGCCGG-TAGAGAGACGGGATGCACAAACCGTGGATCGAT-TGGTGGTAGGTGGGTTTA
839 ACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
4973518 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * * *
4973583 CCTAAGCCATCACGTGAAGTTTCATGGCAAGACGACTCGGTTTCTATTTTTCATGATTTTTCAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * * *
4973648 CTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCAGAATGAGTTTTGGCCCCAAACATGGTAGAC
131 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * * *
4973713 GTGATCCTTGTATTTTAGTTGGCATGCACAAAAAAATTCAACTGAAAACTCGAAGTGCACAAGAT
196 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
* *
4973778 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAGACTTTAATGGCTACTGGCAGCAAACCTG
261 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
* *
4973843 TAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAA
326 TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
** * *
4973908 TATAAGGGTTAAGTACCAGCACCCATCACACATCATGTACGCACACCCCCAGCCCCTCCGATCGT
391 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCAGCCCC-CCGATCGT
* * * **
4973973 CGAAACCCCAATGCCGTCGGTCAGGTTCTCCGTCGATTCTCCGACGATGGTGGCCCGGTGAAGAA
455 CGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGT-GCCCGACGAAGAA
* * **
4974038 AAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGTTGCAACCTCCGGTCTGATCCGATC
518 AAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTCCGGTC-GATCCGATC
*
4974103 TTAGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
582 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * *
4974168 CGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGTGGGAT-CACAAGCTGAGGATCGATCGG
647 CGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGG
* * * * * *
4974232 GTCCCCCTCTGCATGTTGCCGATCCTGTTACTGCAACCCTCGGTCTGATCCGATCTTAGATTGGG
712 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCTGATCAGATCTTAGACTGGG
* * * *
4974297 AATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGTGGGCGGGCGCTACA
777 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACG
* * *
4974362 CCTGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
842 CCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
* * ** *
4974419 GGCATATCTTCATATTTCAGTGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
4974484 CTTAAGACTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGA-TTTTCAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
** *
4974548 GCTTTTTGGGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
131 -CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* *
4974613 CGTGATCCTTGTATTTTT-TTCAGCATGCACAAAAAAATTCAGCGAAAAACTCGAAGTGTACAAG
195 CGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * *
4974677 ATTTTGTGGCCATTTGAAAAAAATATCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
259 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
** * * * *
4974742 TACAAAATATCAAATGCCCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCC
324 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * *
4974807 AATATAAGGGCCAGGTACAAGCACCCATCGCACATCATGTGCGCACACCTCCCGGCCCCTTCGAT
389 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCAGCCCC-CCGAT
** * * * *
4974872 CGTCGGAACCCCAATGCCGCCTTTCAAGTTCTCCGACTATGCTCTGGCGATGGTGCCCCGACGAA
452 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG-CGATGCTCCGACGATGGTG-CCCGACGAA
* * ** * *
4974937 GAAAAATGTGGCACCAGCACTTGCCCGAGCCCAGCATGTGCTGCCGCAACCTGTGGTCCGGTCTG
515 GAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTCCGGT-CGATCCG
*
4975002 ATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
579 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* * * * * *
4975067 CAACGAAACAAGCGAGCGGGCGCTCAGTCGGCCAGAGGGGCGGAATGCGCAAGCTGGGGATCGGT
644 CCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGT
* * * * * * * * * *
4975132 CGGGTCCCCCTCTACGTACTGTCGATCTTGTTGCTGAAACACTTGGTC-CAGTCCA-ATCTTACA
709 CGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCTGA-T-CAGATCTTAGA
* * * * *
4975195 CTGCGAATGAACTCCGTATGGCTAAGCCAACCGACAAAATGAGC--G--GGCGGGCGGGTGGGCA
772 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCA
* * **
4975256 CTATGCTGGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
837 CTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
4975318 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * * *
4975383 CTTAAGCATTCACGAGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTATGATTTTTGAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * * *
4975448 CTTTTTACGGTTCGGGATTTTTTTAAAATTTTTTCGGAAGGACTTTTAGCCCCAAAGTTGGTAGA
131 CTTTTTACGGTTCGAGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * * *
4975513 TGTGATACTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGTAGTGTACAAAA
195 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
4975578 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGTAGCAAACCT
260 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* *
4975643 ATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCA
325 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * * *
4975708 ATATAAGGGTCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGACCCCCCGACC
390 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCAG-CCCCCCGATC
* **
4975773 GACGGAACGTCAATGCCGCCGGTCAGGTTCT-C-C---G----G-CGATGGTGCCCCGACGAAGA
453 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGACGATGGTG-CCCGACGAAGA
* * * * * * *
4975828 AAAATGTGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGACGCAATCGT-TGGTCCAGTCTGA
517 AAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CCTCCGGTCGA-TCCGA
* ** *
4975892 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTATCTGCCTAAGTCAACC
580 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * ** * * * * * * * *
4975957 CATGAAAAGAGCGTGCGGGCGCTCAACCGACCAAAAGGACAGGATGCGCAAGCCGACGATTGCTC
645 CACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTC
* * * * * *
4976022 GAGACCCACTCTGCGTGCTGCCGATCCTGCTGCCGTAACCCTCGATCTGATCAGATCTTAGACTG
710 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCTGATCAGATCTTAGACTG
* * *
4976087 GGAATGAACTCCGTATGCCTATGCCAACCGACGAAATGAGC-GG-A--CGGGCGTGCGGGCACTA
775 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTA
* * *
4976148 CACCGGCCAGAAAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTA
840 CGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
4976207 GGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
4976272 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGCTTTT-TATTTTTCACGATTTTTGAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG-TTTTCTATTTTTCACGATTTTTGAA
*
4976336 ACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
130 ACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * *
4976401 CGTGATCCTAGTATTTTTTTTGGCATGCACAAAAACATTCAACTAAAAACTCGAAGTGTACAAGA
195 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* * * *
4976466 TTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAACTT
260 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
* * ** *
4976531 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGATTGATGACAGTTAGGGGGCCA
325 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* *
4976596 ATATAAGGGCTAAGTACCAGCA-CCATCGCACATCATTTGCGCACACCGCCCCAGCCGCCCCGAT
390 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCAGCC-CCCCGAT
* *
4976660 CG-CTGAAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCCGGCGATACTCCGACGATGG
452 CGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGA---T-----G---CTCCGACGATGG
* *
4976724 TGCCCTGGCGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC-C
504 TGCCC-GACGAAGAAAAATATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTC
* * * *
4976788 TCGGTTCGATGCAATCTTAGGCTGGGAATGAACTCCGTATGCTTAGACTGCGAATGAACTCCGTA
568 -CGG-TCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* ** *
4976853 TGCCTAAGTCAACCCACGAAACGATCGTGCGGGCGCTCAGTCGGCCAGAAAGGTGGGATGCGCAA
631 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAA
* ** * * * * * **
4976918 GCCG-GTGATCGGTCGAGTCCTACTCTGTGGGCTGCCGATGCTGCCGCTGTAACCCTTAGT-TGG
696 GCCGAG-GATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCT-G
*
4976981 GTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G--GGC
759 ATCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGC
* * * *
4977042 GGGTGTGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCTGTGGATCGATTGGGTGGTA
824 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTA
4977107 GGTGGGTTTA
889 GGTGGGTTTA
4977117 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
1 GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
* * *
4977182 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCCTTTTTTATTCTTCACGATTTTTGAAA
66 CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * *
4977247 CTTTTTATGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGAC
131 CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* * *
4977312 GTGATCCTTGTAGTTTTT-TTGGGATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAGGA
196 GTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA
* *
4977376 TTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTAGTGGCAGCAAACCT
260 TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
*
4977441 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGACA
325 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
* * *
4977506 ATATAAGGGCCAAGTACCACCACCCATCGCACATCTTGTGCGCACACACCCCCGGCCCCCTCGAT
390 ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG--CACACCCCCAGCCCCC-CGAT
* * *
4977571 CATCGGAACCCCAAT-----C--TC-GG------GCGATGCTCCAATGATGGTGCACCGACGAAG
452 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGACGATGGTGC-CCGACGAAG
* *
4977622 AAAAATGA-GGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGTAA---CC---C--T-CGA
516 AAAAAT-ATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTCCGGTCGATCCGA
4977677 ---T---CT-GG--T----T-CG-AT-CTTAGAC-GGGAATGAACTCCGTATGCCTAAGTCAACC
580 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * * *
4977725 CACGAAACGAGTGTGCGGGCACTCAGTCGGCCAGAGGGGCGGGATGCACAAGTCGAGGATCAGTC
645 CACGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTC
* * * * * *
4977790 GGGTCCCCCTCTGCGTGCTACCGATCCTACTGCCGCAACCCTCAGTCTGATCTGATCTTAGACTA
710 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCTGATCAGATCTTAGACTG
* * * * * * *
4977855 GGTATGAACTCCGTATACCTAAGCCAACCGATGAAATGAACGGGCGGGCAGGCGGGCGGGCACTA
775 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTA
* *
4977920 CGCCAGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
840 CGCCGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
** * * *
4977979 ACCACATCTTCATATTCTTTG--TGCCAATGCCATTTTCATGGCTAGTAAATTCATACAATGGTC
1 GGCACATCTTCATATT-TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * * * *
4978042 CCTTAAGCCTTCACATCAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCACAATTTTTAAA
65 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA
* * *
4978107 ATTTTTTACGGTTCGAGATTTTTTAAAATTTGTTCGTAAGGAGTTTTGGCCCCAAACTTGGTAGA
130 ACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGA
* * * **
4978172 TGTGATCCTTGTATTTTTATGGGTGTGCACAAAAAAATTCA
195 CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
4978213 TATTTTTGTG
Statistics
Matches: 4129, Mismatches: 489, Indels: 194
0.86 0.10 0.04
Matches are distributed among these distances:
858 167 0.04
859 9 0.00
860 8 0.00
861 188 0.05
862 86 0.02
863 3 0.00
866 1 0.00
868 2 0.00
869 2 0.00
872 1 0.00
875 2 0.00
876 1 0.00
878 1 0.00
882 1 0.00
883 1 0.00
885 63 0.02
886 2 0.00
887 26 0.01
888 280 0.07
889 467 0.11
890 9 0.00
891 1 0.00
893 1 0.00
894 1 0.00
896 4 0.00
897 1 0.00
899 325 0.08
900 815 0.20
901 556 0.13
902 224 0.05
903 102 0.02
904 3 0.00
906 1 0.00
909 11 0.00
910 711 0.17
911 47 0.01
912 2 0.00
913 4 0.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (898 bp):
GGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
CTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
CTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGAC
GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGAT
TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG
TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA
TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCAGCCCCCCGATCGTC
GGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCCGACGATGGTGCCCGACGAAGAAAAA
TATGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCTCCGGTCGATCCGATCTTAG
ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
ACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGGTCGGGTCC
CCCTCTGCGTGCTGCCGATCCTGCTGCTGCAACCCTCGGTCTGATCAGATCTTAGACTGGGAATG
AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGCCGG
CCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
Found at i:4975033 original size:26 final size:26
Alignment explanation
Indices: 4975004--4975056 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4974994 CCGGTCTGAT
*
4975004 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4975030 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4975056 C
1 C
4975057 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4976842 original size:26 final size:26
Alignment explanation
Indices: 4976803--4976855 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4976793 TCGATGCAAT
* *
4976803 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
4976829 CTTAGACTGCGAATGAACTCCGTATG
1 CTTAGACTGCGAATGAACTCCGTATG
4976855 C
1 C
4976856 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATG
Found at i:4977251 original size:26 final size:26
Alignment explanation
Indices: 4977222--4977278 Score: 69
Period size: 26 Copynumber: 2.2 Consensus size: 26
4977212 GACGACTCCT
* * *
4977222 TTTTTATTCTTCACGATTTTTGAAAC
1 TTTTTATGCTTCAAGATTTTTGAAAA
* *
4977248 TTTTTATGGTTCAAGATTTTTTAAAA
1 TTTTTATGCTTCAAGATTTTTGAAAA
4977274 TTTTT
1 TTTTT
4977279 TCGGAAGGAT
Statistics
Matches: 26, Mismatches: 5, Indels: 0
0.84 0.16 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.09, G:0.09, T:0.58
Consensus pattern (26 bp):
TTTTTATGCTTCAAGATTTTTGAAAA
Found at i:4981428 original size:158 final size:158
Alignment explanation
Indices: 4981106--4981491 Score: 497
Period size: 158 Copynumber: 2.4 Consensus size: 158
4981096 TGTGCTGCCG
* *
4981106 CAACCCTCAGTCTGGTCAGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
1 CAACCCTCAGTCTGGTCTGATCTTAGA-TTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * * * *
4981171 ACCAGCGTGCGGGTGCTCAGCCGGCTAGAGGGGCGAGATGCGTAAGCCAGCAATTGACCAGGTCC
65 ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGACGAGATGCATAAGCCAGCAATCGACCAGGTCC
* *
4981236 CTCTCTGCGTGCTGCCAATCCTGCTACCA
130 CTCTCTACGTGCTGCCAATCCTACTACCA
* *
4981265 CAACCCTCAGTCCGGTCTGATCTTAGATTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAA
1 CAACCCTCAGTCTGGTCTGATCTTAGATTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * ** **
4981330 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGACGGGATGCATAAGTCAGGGATCGACCTTGTACC
66 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGACGAGATGCATAAGCCAGCAATCGACCAGGT-CC
* *
4981395 C-CTCTACGTGCTGCCGATCCTACTGCCA
130 CTCTCTACGTGCTGCCAATCCTACTACCA
* * * * * *
4981423 TAACCCTC-GATCTGATCTGATCTTAGACTGGAATGAACTTCGTATGCCTAAGCCAACCGACGAA
1 CAACCCTCAG-TCTGGTCTGATCTTAGATTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
4981487 ACGAG
65 ACGAG
4981492 AGGGTGAGCT
Statistics
Matches: 197, Mismatches: 28, Indels: 5
0.86 0.12 0.02
Matches are distributed among these distances:
157 1 0.01
158 168 0.85
159 28 0.14
ACGTcount: A:0.25, C:0.30, G:0.25, T:0.20
Consensus pattern (158 bp):
CAACCCTCAGTCTGGTCTGATCTTAGATTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGACGAGATGCATAAGCCAGCAATCGACCAGGTCCC
TCTCTACGTGCTGCCAATCCTACTACCA
Found at i:4984661 original size:26 final size:26
Alignment explanation
Indices: 4984632--4984684 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4984622 CTGATCCGAT
4984632 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4984658 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4984684 C
1 C
4984685 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4986448 original size:26 final size:26
Alignment explanation
Indices: 4986412--4986464 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
4986402 CCGGTCCGAT
*
4986412 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4986438 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4986464 C
1 C
4986465 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4987594 original size:159 final size:159
Alignment explanation
Indices: 4987337--4987700 Score: 439
Period size: 159 Copynumber: 2.3 Consensus size: 159
4987327 ACTCCATATG
* *
4987337 CTTAGACTGGGAATGAACT-TCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCT-GTATGCCTAAGTCAACCAACGAAACAAGCGTGCGGGCGCTCAG
** * * * **
4987401 CTTGCTAGAGGGGCGGGATGAGCAAGCCGGGGATC-AGCCAGGTCCCCCTCTGTGTGCTGTCGAT
65 CCGGCCAGAGGGGCGGGATGAGCAAGCCGAGGATCGA-CCAGGTCCCCCTCTGCGTGCTACCGAT
4987465 CCTACTACCGTAACCCTC-AGTCTGATCCAAT
129 CCTACTACCGTAACCCTCGAGTC-GATCCAAT
* * *
4987496 CTTAGATTGGGAATGAACTCTGTATGCCTAAGTTAACCAATTG-AACAAGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCAA-CGAAACAAGCGTGCGGGCGCTCAG
* * * * *
4987560 CCGGCCAGAGGGGTGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTTTGCGTGCTACCGATC
65 CCGGCCAGAGGGGCGGGATGAGCAAGCCGAGGATCGACCAGGTCCCCCTCTGCGTGCTACCGATC
* * * * *
4987625 CTGCTACCGTAGCCCTCGATTCGGTCCGAT
130 CTACTACCGTAACCCTCGAGTCGATCCAAT
* * *
4987655 CTTAGACTGGGAATGAACTCGGTATGCCTAAGCCAACCGACGAAAC
1 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAAC
4987701 GAATGGGTGG
Statistics
Matches: 172, Mismatches: 28, Indels: 10
0.82 0.13 0.05
Matches are distributed among these distances:
158 1 0.01
159 165 0.96
160 6 0.03
ACGTcount: A:0.23, C:0.28, G:0.29, T:0.21
Consensus pattern (159 bp):
CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACAAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGAGCAAGCCGAGGATCGACCAGGTCCCCCTCTGCGTGCTACCGATCC
TACTACCGTAACCCTCGAGTCGATCCAAT
Found at i:4989292 original size:26 final size:26
Alignment explanation
Indices: 4989263--4989315 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4989253 CTGGTCCGAT
*
4989263 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
4989289 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4989315 C
1 C
4989316 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.19, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4990198 original size:26 final size:26
Alignment explanation
Indices: 4990169--4990221 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4990159 CCGATCCGAT
4990169 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
4990195 CTTAGGCTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
4990221 C
1 C
4990222 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:4990446 original size:906 final size:903
Alignment explanation
Indices: 4987503--4991100 Score: 4937
Period size: 906 Copynumber: 4.0 Consensus size: 903
4987493 AATCTTAGAT
* * *
4987503 TGGGAATGAACTCTGTATGCCTAAGTTAACCAATTG-AACAAGCGTGCGGGCGCTCAGCCGGCCA
1 TGGGAATGAACTCTGTATGCCTAAGTCAACCAA-CGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * ** * *
4987567 GAGGGGTGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTTTGCGTGCTACCGATCCTGCTAC
65 GAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCACTGCATGCTACCGATCCTGCTGC
* *
4987632 CGTAGCCCTCGATT-CGGTCCGATCTTAGACTGGGAATGAAC-TCGGTATGCCTAAGCCAACCGA
130 CGCAACCCTCG-TTCCGGTCCGATCTTAGACTGGGAATGAACTTC-GTATGCCTAAGCCAACCGA
* * ** * * *
4987695 CG-AA--A-----CGAATGGGTGGGCATGCACTATGTCAGCCAGAGAGAC-GGATGCGCAAGCCA
193 CGAAATGAGCGGGCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCA
* * *
4987751 TGGATCGATGGGGTGGTAGGTTGGTTTGGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
258 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
* * *
4987816 TATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACT
323 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACT
* ** *
4987881 CGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGA
388 CGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * * *
4987946 AAGAGTTTTGGCCTCAAACTTGGTAGACGTGATCCTTATA-TTTTGTTGGCATGCACAAAAAAAT
453 AGGAGTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
4988010 TCAGCTAAAAACTC-AAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGA
518 TCAGCTAAAAACTCGAAA-TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
4988074 CACTTTATTGGCTACTGGTAGCAAACCTGTAAAATCTCAGATGCTCTTTAAGGGGGTGTGAGTTC
582 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
4988139 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATTAT
647 TCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCAT
* ** * * * * * *
4988204 CTACGTTCACCCCC-C-ACCCCCTGATCATCGGAACCCCATTG-TCACCGGTCAGGTTCTCCGAC
712 GTACGCACACCCCCTCGGCCCCCCGATCGTCGGAACCCCAATGCT-GCCGATCAGGTTCTCCGAC
* * *
4988266 GGTGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCAT
776 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCAT
* * * * * * * *
4988331 GTGCTGTCGGAACCCTCGGTCCGATTCGATCTTCGGCTGTGAATGAACTCTGTATGCTTAGAC
841 GTGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGGC
* * * * * *
4988394 TGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAACGTACGGGCGCTCAGTCGGGCAG
1 TGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * ** ** * *
4988459 AGGGGCGGGATGCGCAAGCCAGGGATC-AGTTGGGTCCTACTTTGCATGCTATCGATCTTGCTGC
66 AGGGGCGGGATGCGCAAGCCGGGGATCGA-TCGGGTCCCCCACTGCATGCTACCGATCCTGCTGC
* * * *
4988523 CGCAACCCTCGGTCTGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATG
130 CGCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACG
* * * *
4988588 AAATGAGCGGGCGGATGGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGATACGCAAGCCATG
195 AAATGAGCGGGCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATG
* * *
4988653 GATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCGTGCCGATGCCATTTTTA
260 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTA
* * * *
4988718 TGGCTTGTAAATTCATACAATGGTCCCTAAAGCCTTCACATGAAGTTTCTTGGCAAGACAACTCA
325 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCG
* * *
4988783 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAG
390 TTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
*
4988848 GGGTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAACAATT
455 GAGTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATT
* * *
4988912 TAGCTAAAAACTCAAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTCAGACA
519 CAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* *
4988977 CTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTC
584 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
4989042 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGT
649 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGT
* * * * * *
4989107 ACGTACACCCTCT-GGCCCCCCGATCGTCGAAACCCCAACGCTGCCGATCAAGTTCTCCGGCGAT
714 ACGCACACCCCCTCGGCCCCCCGATCGTCGGAACCCCAATGCTGCCGATCAGGTTCTCCGACGAT
*
4989171 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGC-AGCTCCAGCACATGCCCGAGCCCAGCATGT
779 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGA-CACCAGCACATGCCCGAGCCCAGCATGT
* * * *
4989235 GCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGGC
843 GCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGGC
* * * ** *
4989296 TGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAATGAGCGTGTGGGTTCTCAGCCAGCCAG
1 TGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * * * * *
4989361 AGGGTCGGGTTGCGTAAGTCGGGGATCGATCGGGTCCCCCACTACGTGCTGCCGATCCTACTGCC
66 AGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCACTGCATGCTACCGATCCTGCTGCC
* * * * * * * *
4989426 ACAACCCTCATTCTGGTCTGATCTTGGACTGGGATTGAACTCCGTATGCCTAAGCCAACCGACAA
131 GCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGA
* * ** * *
4989491 AATGAGTGGACGGGCGGGCGGGTGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
196 AATGAGCGGGCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGG
*
4989556 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTAT
261 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
**
4989621 GATTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGT
326 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGT
*
4989686 TTTCTATTTTTCACGA-TTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
391 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * *
4989750 GGTTTTGGCCCCAAACTTGGTACTCGTGATCCTTGTATTTTTGTTGGCATCCACAAAAAAATTCA
456 AGTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
4989815 TCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCGATTTCAGACACT
521 GCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
4989880 TTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGA
586 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAA
* * *
4989945 GGATTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
651 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTAC
* *
4990010 GCACACCCCCCCTCTGGCCCCCCCGTTCGTCGGAACCCCAATGCTGTCGATCAGGTTCTCCGACG
716 GCACA--CCCCCTC-GG-CCCCCCGATCGTCGGAACCCCAATGCTGCCGATCAGGTTCTCCGACG
* * *
4990075 ATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGACAGCAGCACATGCCCGAGCCCAGCATA
777 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATG
** *
4990140 TGCTGCCGTTACCCTCGGTCCGATCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGGC
842 TGCTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGGC
* * *
4990202 TAGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGTGCTCAGTCGGCCAG
1 TGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * *
4990267 AGGGGCAGGATGCACAAGCCGGGGATTGACCGGGTCCCCCACTGCATGCTATCGATCCTGCTGCC
66 AGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCACTGCATGCTACCGATCCTGCTGCC
** * *
4990332 GTGACCCTCGTTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGA
131 GCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGA
* * * **
4990397 AACGAGCGGGCGAACGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAACTGTGG
196 AATGAGCGGGCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGG
* * *
4990462 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTAT
261 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
* * *
4990527 GGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGACTTGT
326 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGT
*
4990592 TTTCTATTTTTCACGATTTTTGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
391 TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
* * * * * *
4990657 AG-TTTGTGCTCCAAACTTGGTA-TACATTATCCTTGTATTTTTATTGGCCTGCACAAAAAATTT
456 AGTTTTG-GCCCCAAACTTGGTAGT-CGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* *
4990720 CAGCTAAAAACTCGAAGTGTACAAGA-TTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAGACA
519 CAGCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
* * *
4990784 CTTTAGTGGCTCCTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTC
584 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * *
4990849 AAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGT
649 AAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGT
** * * * *
4990914 GTGCACACCCCCTCGGCCCCCCGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTCC-AGTGA
714 ACGCACACCCCCTCGGCCCCCCGATCGTCGGAACCCCAATGCTGCCGATCAGGTTCTCCGA-CGA
** * * ** * *
4990978 TGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACTGGCATATGCTCGAGCCCAGCATGT
778 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGT
* * * *
4991043 GTTGCCACAACCC-CTGGTCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTA
843 GCTGCCGCAACCCTC-GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTA
4991101 AACCAGCGGG
Statistics
Matches: 2398, Mismatches: 276, Indels: 55
0.88 0.10 0.02
Matches are distributed among these distances:
890 4 0.00
891 161 0.07
892 4 0.00
894 1 0.00
899 29 0.01
900 230 0.10
901 503 0.21
902 648 0.27
903 9 0.00
904 7 0.00
905 2 0.00
906 681 0.28
907 119 0.05
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
TGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAG
AGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCACTGCATGCTACCGATCCTGCTGCC
GCAACCCTCGTTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGA
AATGAGCGGGCGAACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGG
ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTAT
GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGACTCGT
TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGG
AGTTTTGGCCCCAAACTTGGTAGTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAA
GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTAC
GCACACCCCCTCGGCCCCCCGATCGTCGGAACCCCAATGCTGCCGATCAGGTTCTCCGACGATGC
TCCGACGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCT
GCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGGC
Found at i:4991714 original size:840 final size:839
Alignment explanation
Indices: 4990335--4996432 Score: 2779
Period size: 900 Copynumber: 6.9 Consensus size: 839
4990325 TGCTGCCGTG
* * * *
4990335 ACCCTCGTTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATGAAAC
1 ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAAC
* * * * * *
4990400 GAGCGGGCGAACGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAACTGTGGATC
66 GAGCAGGCGAACGGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATACGCAAACCGTGGATC
4990465 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGC
131 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGC
*
4990530 TTGTAAATTCATACAATGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGACTTGTTTT
196 TTGTAAATTCATACAATGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGAATTGTTTT
* *
4990595 CTATTTTTCACGATTTTTGAAACTTTTTAAGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
261 CTATTTTTCACGATTTTTGAAACTTTTTAAGATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGT
* * * *
4990660 TTGTGCTCCAAACTTGGTATACATTATCCTTGTATTTTTATTGGCCTGCACAAAAAATTTCAGCT
326 TTGTGCTCCAAACTTGGTATACATGATCCCTGTATTTTTATTGGCATGCACAAAAAAATTCAGCT
* * * *
4990725 AAAAACTCGAAGTGTACAAGATTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAG
391 AAAAACTCCAAGTGCACAAGATTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
* * * * *
4990790 TGGCTCCTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
456 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAGCTCTCAAGGTT
*
4990855 TGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGTGCAC
521 TGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCAC
* * * *
4990920 ACCCCCTCGGCCCCCC-GATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTCCAGTGATGCTCC
586 A-CCCC-CGGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCAGCGATGCTCC
** * * *
4990984 -GACGATGGTGCCCCGGTGAAGAAAAATGTGGCACTGGCATATGCTCGAGCCCAGCATGTGTTGC
649 AG-CGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
**
4991048 CACAACCC-CTGGTCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCGGGG
713 CACAACCCTC-AATCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCGGGG
4991112 CGGGATGCGTAAGCCAGGGATCAACCGGGTCCCCCTCTACGTGCTGCCGATCCTGTCGTCGCA
777 CGGGATGCGTAAGCCAGGGATCAACCGGGTCCCCCTCTACGTGCTGCCGATCCTGTCGTCGCA
4991175 ACCCTCGGTCCGGTGC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAA
1 ACCCTCGGTCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAA
** * * *
4991239 CGAGCAGGCGGGCGGGCAGGCGGGCACTACGTCGGCCAGAGGGACAGGATACGCAAGCCGTGGAT
65 CGAGCAGGCGAACGGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATACGCAAACCGTGGAT
** * *
4991304 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTTTATTTCTGTATGCCAATGCCATTTTTATGG
130 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGG
* *
4991369 CTTGTAAATTCATACAAT-AGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAATTGTT
195 CTTGTAAATTCATACAATGA-TCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGAATTGTT
* ** *
4991433 TTCTATTTTTCATGATTTTTGAAACTTTTTACTATTCGAGATTTTTTAAAATTTTTTCGGAGGGA
259 TTCTATTTTTCACGATTTTTGAAACTTTTTAAGATTCGAGATTTTTTAAAATTTTTTCGGAAGGA
** *
4991498 GTTT-TGGC-CTCAAACTTGGTAGT-TGTGATCCCTGTATTTTTGTTAGG-ATGCACAAAAAAAT
324 GTTTGT-GCTC-CAAACTTGGTA-TACATGATCCCTGTATTTTTATT-GGCATGCACAAAAAAAT
*
4991559 TCAGCTAAAAACTCCAAGTGCACAAGATTTTGTGACCA-TTGAAAAAAGTGTCCCCATTTCGGAC
385 TCAGCTAAAAACTCCAAGTGCACAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
4991623 ACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAGCTCT
449 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAGCTCT
* * *
4991688 CAATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
514 CAAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATG
**
4991753 TGCGCACACCCCCGGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCTGGCGAT
579 TGCGCACACCCCCGGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCAGCGAT
* * *
4991818 TCTCCAGCGATGTTGCCCCGGTGAAGAAAAATGTTGCACCAGCACATGCCCGAGCCCAGCATGTG
644 GCTCCAGCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * * * * *
4991883 CTGCCGCAACCCTCAATTCGGTCCTATCTTAGACTGGGAATGAACTCCGTATGCTTAGA-CTG-G
709 CTGCCACAACCCTCAATCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCG
* * * * * *** * * *** * *
4991946 GAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCT-C-AGCTGGCCAGA
774 G---G---GCGGGATGCGTAAG-CCAGGGATCAACCG-G-GT-CCCCCTCTACGTGCT-GCC-GA
** *
4992009 GGGGC-G-GGATGCGCA
827 --TCCTGTCG-T-CGCA
* ** * * ** * *
4992024 AACCGGGGATCGACCAGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCA-CAACCCTCAGT-TC
1 ACCCTCGG-T---CC-GGT----CT-GA--T-CT-TAGA--CTG--GGAATGAA--CTCCGTAT-
* * ** * * * ** ** *
4992087 GGTCCGATGATAGACTAA--GAATG-AACTCCGTATGCGTAA--GCCAACCGACGAAACGAGCGT
45 -G-CC--T-A-A-ACCAACCG-ACGAAAC-GAGCAGGCG-AACGGGCAGGCG--GGCACTA-CG-
* * * * * * *
4992147 GCGGGC-GGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCCTAGATCGATAG
96 CCGGCCAGAG-AGACAGG-A-TACG-----C----A-A----A--C-C--G---TGGATCGATAG
* ** * *
4992211 GGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCAACGTGCCAATGCCATTTTTATGGCTTGTA
136 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTA
* * * * * * *
4992276 AATTCATACAATGGTCCCTTAAGCCATCACGTGAAGTTTCATGGCAACACGACTCGTTTTCTATT
201 AATTCATACAATGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGAATTGTTTTCTATT
** * ** * * * *
4992341 TTTCACGATTTTCAAAACTTTATGCGGTTCGAGATTTTTTAAAACTTTTTCGAAAGGA-TTTTTG
266 TTTCACGATTTTTGAAACTTTTTAAGATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTGT-
* * * * * * * * *
4992405 GCCCCAAACTTCGTAGACGTGATCCTTGAATTTTTGTTGGTATGCACAAAAAACTTCAGCTAAAA
330 GCTCCAAACTTGGTATACATGATCCCTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAA
* * * *
4992470 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATAG
395 ACTCCAAGTGCACAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * * * *
4992535 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT-TAAAGAGGGTGTGAGTTTTCGAGGTTTG
459 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTCT-AAGGGGGTGTGAGCTCTCAAGGTTTG
* *
4992599 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
523 ATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACAC
** * * * * *
4992664 CCCCCACGGCCCCTAGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCC-GACGATGCTCCA
588 CCCCGGC-CCCCCT-GATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCAG-CGATGCTCCA
* * ** * *
4992728 ACGATGGTGCCCCGATGAAGAAAAATGCAGCACCAGCACATACCCGAGCCCAGCATGTG-TTCTC
650 GCGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC-C
* * * * * * * * ***
4992792 GCAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGATCTCCGTATGCTTAGA-C--TGGGAAT
714 ACAACCCTCAATCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCGGGGCG
* ** * * *** ** * * * *
4992854 GAACACCGTACGCCTA-AG-TCAACCCACGAAACGAGCGTGTGGACGCT-CAGCCGA-CCAGAGG
779 GGA-TGCGTAAGCC-AGGGATCAA--C-CGGGTC-CCCCTCT--ACG-TGCTGCCGATCC----T
*
4992915 GGCGGGATGCGCA
831 GTC--G-T-CGCA
* * * ** **
4992928 AGCCGGGGATCGG-CCAGGTAACCTTCAACGTGCTGTCGATCCTGCGG-CCGCAAC-CC-TCGGT
1 A-CC----CTCGGTCC-GGT---C-T-GA--T-CT-TAGA--CTG-GGAATG-AACTCCGTATG-
* * * * * ** * * * * *** * *
4992989 CC-AATCAAATCTTAC-ACTGGGAATGAAC-TCCGTA-TGCCTAAGCCAACTAACGAAACGAGCG
46 CCTAAACCAA-C---CGAC--GAAACGAGCAGGCGAACGGGC-AGGCGGGC--AC--TACG-CCG
* * * * *
4993050 GGCAG-GCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGT
99 GCCAGAG-AGACAGG-A-TA-------C-----G-C---A-----AA-CCGTGGATCGATAGGGT
* * *
4993114 GGTAGGTGGGTTTAGGCACATTTTCATATTTCTCCATGCCAATGCCATTTTTATGGCTTGTAAAT
139 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAAT
* * * * *
4993179 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
204 TCATACAATGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGAATTGTTTTCTATTTTT
* ** * * * * * *
4993244 TACGATTTTTGAAACTTTTTGGGGTTTGGGATTTTTT-AAATTTTTTTGGAAGGCGTTT-TGGCC
269 CACGATTTTTGAAACTTTTTAAGATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTGT-GCT
* * * * *
4993307 CCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAGCTAAAAACT
333 CCAAACTTGGTATACATGATCCCTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * * *
4993372 CGAAGTGTACAAGACTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTT
398 CCAAGTGCACAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * * *
4993437 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
462 CTGGCAGCAAACCTGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAGCTCTCAAGGTTTGATGA
* *
4993502 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
527 GGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACACCCCC
* * * *
4993567 GGCCCCCCCGATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCC-GACGATG
592 GGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCAGCGATGCTCCAG-CGATG
** ** * * * * * * *
4993631 GTGCCCCGACGAAGAAAAATACGGCACCAACACATGCGCTAGCCCATCATGTGCTACCGCAACCA
656 GTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCC
** * * * * * * * *
4993696 TCGGTCCAGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGA-CTG-GGAATGAACTTCG
721 TCAATCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCGG---G-GC--GG
* * ** * * * * * *
4993759 TATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCGCTCAGCCAGCCAGAGGGGCG-GCATGCG
780 GATG-C---GT-AAGCCA-GGGATCAAC-CG-GGTC-C-C--CC--TC-TA----CGTGC-TGC-
* * *
4993823 CAAGCCAGGGATCGGTCGGTTC-
824 CGATCC--TG-TC-GTC-G--CA
* * * * * * **** *
4993845 CCCCTCTGAGTGCTG-CAGATCCT-G-CTGCCGCAACCCTCGGTCCGGTTTGACCTTAGACTGGG
1 ACCCTC-G-GTCCGGTCTGATCTTAGACTG--GGAATGAAC--TCC-GTATG-CC-T--A-----
** * * * * * * * * *
4993907 AATGAACTCTGTATGCCTAAGCCAACCGACGAAAGGGGCGGGTGGGCGGGCACTACGCCGGCCAG
50 AACCAAC-C-G-A---CGAAACGAGCAGGCG-AACGGGCAGG-CGG---GCACTACGCCGGCCAG
* * * * *
4993972 AGAGAC-GAGATTCGCGAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATAT
104 AGAGACAG-GATACGCAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT
* * * * * * *
4994036 TTCTGCGTGCCAATGCCATTTTTATGGCTTGCAAATTCATGCAATGGTCCCTTAAGCCTTCCCGT
168 TTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTTCACAT
* * * * * * *
4994101 GAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTCACAAC-TTTTACGGTTCG
233 GAAGTTTCATGGCAAGAAGAATTGTTTTCTATTTTTCACGATTTTTGA-AACTTTTTAAGATTCG
* * * * * * *
4994164 GGATTTTTTTAAATTTTTTCGGAAGGAGTTT-TACCCCCAAACTTGGTAGACGTGATCCTTGTAT
297 AGATTTTTTAAAATTTTTTCGGAAGGAGTTTGT-GCTCCAAACTTGGTATACATGATCCCTGTAT
* * * * * ** *
4994228 GTTTGTTGGCATGCACAAAAAAATCCAACCAAAAACTTGAAGTGTACAAGATTTTGTGACCATTT
361 TTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCCAAGTGCACAAGA-TTTGTGACCATTT
* *
4994293 GAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAAT
425 GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * * * * *
4994358 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCGAG
490 GCACTCTAAGGGGGTGTGAGCTCTCAAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAG
* * * *
4994423 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGTCCCCCCCGATCGTCGGAACCCCAA
555 TACCAGCAACCATCGCACATCATGTGCGCACA--CCCCCGGCCCCCCTGATCGCCGGAACCCCAA
* * * * ** * *
4994488 TGCCGCCGATCAGGTTCTCCGGTGATGCTCCGGCGATAGTGCCCCGACGAAGAAAAAAGCGGCAC
618 TGCCGCCGATCAGGTTCTCCAGCGATGCTCCAGCGATGGTGCCCCGGTGAAGAAAAATGTGGCAC
* ** * * *
4994553 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTTCGGTCTGATCTTAGACTGAGA
683 CAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCCGGTCCGATCTTAGACTGGGA
* * * * * * *
4994618 ATGAACTCCGTATGCTTAGA-CTG-GGAATGAACTCCGTATG-GCTAAGTCAACAAACGAAACGA
748 AGGAACTCCGTATGCTTAAACCAGCGG---G---GCGGGATGCG-TAAG-C--C--A-G---GGA
* * * * * * * * *
4994680 GCATGCCGGCTCTCAGCCGGC-CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC-
797 TCA-ACCGGGTC-C--CC--CTC-TA----CGTGCTGC-CGATCC--TG-TC-GTC--G-CA
* * * ** * * ** * * * * * *
4994740 ACCCTCTGCGTGCTG-CCGATCCTTCTAC-CGTAA--CCCTCGGTTTGGTCTAATCTTAGACTGG
1 ACCCTC-G-GTCCGGTCTGAT-CTTAGACTGGGAATGAACTCCGTAT-GCCTAAAC-CA-AC--C
* * * *
4994801 GAATGAACTCCGTATGCCTAAGCCAATCGATGAAACGAGCAGGCGGGCGGGCGGGCGGGCAGGCG
58 G-ACGAA--ACG-A-G-C--AG------G-CG-AACGGGCAGGC-GG------------------
** * * * * *
4994866 GGCACTACGCCGGCCTTAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGAGTTT
88 -GCACTACGCCGGCCAGAGAGACAGGATACGCAAACCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
4994931 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
152 AGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGATC
* ** * * * * **
4994996 CCTTAAGCCTCCACGCGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCCAA
217 CCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGAATTGTTTTCTATTTTTCACGATTTTTGAA
* ** * * * * *
4995061 ATTTTTTGCGGTTTGGGA-TTTTTAAAATTTTTTCGGAAGGAGTTT-TGGCCCCAAACTTGGTAG
282 ACTTTTTAAGATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTGT-GCTCCAAACTTGGTAT
* * * * * * * *
4995124 ACGTGATCCTTGTATTTTTGTTTGCATGCATAAAAACATTCAGCTAAAAACTCGAAGTGTACAAG
346 ACATGATCCCTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCCAAGTGCACAAG
* * *
4995189 ATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTGAGACACTTTAATGGCTACT-ACAGCAAACC
411 A-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * * ** *
4995253 TGTGAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCC
475 TGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAGCTCTCAAGGTTTGATGAGGGATAAGGGGCC
* * * *
4995318 AAAATAAGGGCCAAGTACCACCACCCATCACACATCATGTGCGCACACCACCCCTGGCCCCCC-G
540 AATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACA-C-CCCC-GGCCCCCCTG
** ** * * * * * * **
4995382 ATCATCGGAACCCCAATGCCATCGGTCAGATTCTCCGGCAATGATCCAGCGATGGTGCCCTGACG
602 ATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCAGCGATGCTCCAGCGATGGTGCCCCGGTG
* * * ** *
4995447 AACAAAAATGTGGCACCAGCACATGCCCGAGCCCATCATGTGCTACCACAACCCTCGGTCTGGTC
667 AAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCCGGTC
* * * * * * ** * *
4995512 TGATCTTAGTCTGGGAATGAACTCTGTATGC-TAGACTAG-GAATGAACTCCGTATGCCTAAGTC
732 CGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCG---G--GGCGGGATG-C---GT-
* * * * ** * * * * * *
4995575 AACCCACGGAACGAACGTGCGGGCACTCAACCGGCCAGAGCGGCGGGATTCGCAAGCCGGGAATC
787 AAGCCAGGGATC-AAC---CGGG---TC--CC--CC---TCTACGTGCTGC-CGATCC-TG--TC
4995640 GGTCGGGTC-
834 -GTC--G-CA
* * * * ** * * * * *
4995649 CCCCTCTGCGTGCTGTC-GATCCT--ACTGTCATAACCCTCGATCCGGTCTGATCTTAGACTGGG
1 ACCCTC-G-GTCCGGTCTGATCTTAGACTG--GGAA---T-GA-AC--TCCG-T-AT-GCCT--A
** * * * * * * * * ** *
4995711 AATGAACTCCGTATGCCTAACCCAACCGACGAAATGAGTGGGCGGGCAGGCGGGCGGGCACCACG
50 AACCAA--CCG-A---CGAAACGAGCAGGCG-AACGGGCAGGCGGG------------CACTACG
* * * * * *
4995776 CCGACCAGAGAGAC-GGGTGCGCAAGCCATGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATC
96 CCGGCCAGAGAGACAGGATACGCAAACCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * * * *
4995840 TTCATATTTCTACCTGCCAATGCCATTTTTATGGCTTGTAAATTCACACAATGGTCCCTTAAGCC
161 TTCATATTTCTGCATGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGATCCCTTAAGCC
* * * * ** **
4995905 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGC
226 TTCACATGAAGTTTCATGGCAAGAAGAATTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAA
* * * * ** *
4995970 GGTTCAAGATTTTTTAAAATTTTTTC-GAAGGAGTTT-TGTCCCCAAACTTGGTAGATGTGATGC
291 GATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTGTG-CTCCAAACTTGGTATACATGATCC
* * * * ** * *
4996033 TTGTATTTTTGTTGGCAAGCACAAAACAATTCAGCTAAAAACTAGAAGTGTATAAGATTTTGTGA
355 CTGTATTTTTATTGGCATGCACAAAAAAATTCAGCTAAAAACTCCAAGTGCACAAGA-TTTGTGA
*
4996098 CCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
419 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * * * * * *
4996163 TCGAATGCTCTTTGAA-GGGGTGTGAGTTCTCAAGGTTTGATGAAGGAT-AGGGTCCAATATAAA
484 TCAAATGCACTCT-AAGGGGGTGTGAGCTCTCAAGGTTTGATGAGGGATAAGGGGCCAATATAAG
* * * *
4996226 GGCCAAGTACCAGCACCCATCGTACATCAAGTGCGCACACCCCCCGGCCCCCC-GATCGTCGGAA
548 GGCCAAGTACCAGCAACCATCGCACATCATGTGCGCACA-CCCCCGGCCCCCCTGATCGCCGGAA
* * * * * * *
4996290 CCCCAATGCCACCGGTCAGGTTCTCC-GACGATGCTTCGGTGATGGTGCCCTGCTGAAGAAAAAT
612 CCCCAATGCCGCCGATCAGGTTCTCCAG-CGATGCTCCAGCGATGGTGCCCCGGTGAAGAAAAAT
* * * * ** *
4996354 GCGGTACCAGCACATGCTCGAGCCCAGCATGTGTTGCTGCAACCCTCGATCCGGTCCGATCTTAG
676 GTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCAATCCGGTCCGATCTTAG
*
4996419 ACTGGGAATGAACT
741 ACTGGGAAGGAACT
4996433 TCATACACTT
Statistics
Matches: 4273, Mismatches: 624, Indels: 664
0.77 0.11 0.12
Matches are distributed among these distances:
837 2 0.00
838 11 0.00
839 149 0.03
840 516 0.12
841 13 0.00
843 10 0.00
844 8 0.00
845 4 0.00
846 6 0.00
847 7 0.00
848 2 0.00
849 10 0.00
850 1 0.00
853 2 0.00
854 3 0.00
857 1 0.00
859 1 0.00
861 1 0.00
862 2 0.00
863 3 0.00
865 3 0.00
866 2 0.00
867 3 0.00
868 5 0.00
869 1 0.00
870 2 0.00
872 1 0.00
873 10 0.00
874 8 0.00
875 8 0.00
876 4 0.00
877 9 0.00
878 1 0.00
879 4 0.00
881 2 0.00
882 1 0.00
883 2 0.00
884 6 0.00
886 1 0.00
887 1 0.00
888 2 0.00
889 3 0.00
890 8 0.00
891 5 0.00
892 23 0.01
893 414 0.10
894 2 0.00
895 246 0.06
896 13 0.00
897 153 0.04
898 164 0.04
899 285 0.07
900 562 0.13
901 357 0.08
902 165 0.04
903 16 0.00
904 187 0.04
905 7 0.00
906 10 0.00
907 8 0.00
908 18 0.00
909 76 0.02
910 267 0.06
911 335 0.08
912 27 0.01
913 6 0.00
914 7 0.00
915 7 0.00
916 14 0.00
917 21 0.00
918 15 0.00
919 5 0.00
920 11 0.00
921 3 0.00
922 3 0.00
923 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (839 bp):
ACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAACCGACGAAAC
GAGCAGGCGAACGGGCAGGCGGGCACTACGCCGGCCAGAGAGACAGGATACGCAAACCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATACCATTTTTATGGC
TTGTAAATTCATACAATGATCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGAAGAATTGTTTT
CTATTTTTCACGATTTTTGAAACTTTTTAAGATTCGAGATTTTTTAAAATTTTTTCGGAAGGAGT
TTGTGCTCCAAACTTGGTATACATGATCCCTGTATTTTTATTGGCATGCACAAAAAAATTCAGCT
AAAAACTCCAAGTGCACAAGATTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAGCTCTCAAGGTT
TGATGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCAACCATCGCACATCATGTGCGCAC
ACCCCCGGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCCAGCGATGCTCCAG
CGATGGTGCCCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCAC
AACCCTCAATCCGGTCCGATCTTAGACTGGGAAGGAACTCCGTATGCTTAAACCAGCGGGGCGGG
ATGCGTAAGCCAGGGATCAACCGGGTCCCCCTCTACGTGCTGCCGATCCTGTCGTCGCA
Found at i:4991946 original size:26 final size:26
Alignment explanation
Indices: 4991910--4991962 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
4991900 TCGGTCCTAT
4991910 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4991936 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
4991962 C
1 C
4991963 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:4992862 original size:26 final size:26
Alignment explanation
Indices: 4992814--4992863 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
4992804 CTGGTCCAAT
* *
4992814 CTTAGACTGGGAATGATCTCCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
4992840 CTTAGACTGGGAATGAACACCGTA
1 CTTAGACTGGGAATGAACACCGTA
4992864 CGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.28, C:0.20, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCGTATG
Found at i:4993747 original size:26 final size:26
Alignment explanation
Indices: 4993711--4993763 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
4993701 CCAGTCTGAT
4993711 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
* *
4993737 CTTAGACTGGGAATGAACTTCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
4993763 C
1 C
4993764 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:4994645 original size:26 final size:26
Alignment explanation
Indices: 4994606--4994657 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
4994596 TCGGTCTGAT
4994606 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
*
4994632 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
4994658 GCTAAGTCAA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.25, T:0.27
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:4996083 original size:900 final size:901
Alignment explanation
Indices: 4991103--4997565 Score: 8705
Period size: 900 Copynumber: 7.2 Consensus size: 901
4991093 TATGCTTAAA
* * * *** *
4991103 CCAGCGGGGCGGGATGCGTAAGCCAGGGATCAACCGGGTCCCCCTCTACGTGCTGCCGATCCTG-
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
* *
4991167 TCGTCGCAACCCTCGGTCCGGTGC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAACCAAC
66 T-GCCGCAACCCTCGGTCCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * *
4991231 CGACGAAACGAGCAGGCGGGCGGGCAGGCGGGCACTACGTCGGCCAGAGGGACAGGATACGCAAG
129 CGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
** ***
4991296 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTTTATTTCTGTATGCCAATGCCAT
194 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
*
4991361 TTTTATGGCTTGTAAATTCATACAATAGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
259 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * ** * ** *
4991426 AATTGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACTATTCGAGATTTTTTAAAATTTTTTC
324 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
* * ** *
4991491 GGAGGGAGTTTTGGCCTCAAACTTGGTAGTTGTGATCCCTGTATTTTTGTTAGG-ATGCACAAAA
389 -GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAA
* *
4991555 AAATTCAGCTAAAAACTCCAAGTGCACAAGATTTTGTGACCA-TTGAAAAAAGTGTCCCCATTTC
452 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * * *
4991619 GGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCACTCTAAGGGGGTGTGAG
517 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
4991684 CTCTCAATGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
582 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
4991749 CATGTGCGCACA-CCCCCGGCCCCCCTGATCGCCGGAACCCCAATGCCGCCGATCAGGTTCTCTG
647 CATGTGCGCACACCCCCCGGCCCCCC-GATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCG
* * ** **
4991813 GCGATTCTCCAGCGATGTTGCCCCGGTGAAGAAAAATGTTGCACCAGCACATGCCCGAGCCCAGC
711 GCGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* **
4991878 ATGTGCTGCCGCAACCCTCAAT-TCGGTCCT-ATCTTAGACTGGGAATGAACTCCGTATGCTTAG
776 ATGTGCTACCGCAACCCTCGGTCT-GGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
* *
4991941 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCTGG
839 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* ** *
4992004 CCAGAGGGGCGGGATGCGCAAACCGGGGATCGACCAGGTCCCCCTCTACGTGCTGTCGATCCTGC
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
* * * * ** ** *
4992069 TGCCACAACCCTCAGTTCGGTCCGATGATAGACTAAGAATGAACTCCGTATGCGTAAGCCAACCG
66 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* *
4992134 ACGAAACGAGCGTGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCC
131 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
4992199 CTAGATCGATAGGGTGGTAGGTGTGTTTAGGCACATCTTCATATTTCAACGTGCCAATGCCATTT
196 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTT
* *
4992264 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCATCACGTGAAGTTTCATGGCAACACGAC
261 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * * *
4992329 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTATGCGGTTCGAGATTTTTTAAAACTTTTTCGA
326 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG-
* * * * *
4992394 AAGGATTTTTGGCCCCAAACTTCGTAGACGTGATCCTTGAATTTTTGTTGGTATGCACAAAAAAC
390 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
*
4992459 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
455 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * * *
4992524 CACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTAAAGAGGGTGTGAGTTT
520 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
4992589 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
585 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
** * ** *
4992654 GTGCGCACACCCCCCACGGCCCCTAGATCGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGAC
650 GTGCGCACA-CCCCC-CGGCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGC
* * * *
4992719 GATGCTCCAACGATGGTGCCCCGATGAAGAAAAATGCAGCACCAGCACATACCCGAGCCCAGCAT
713 GATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* * ** *
4992784 GTG-TTCTCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGATCTCCGTATGCTTAGACT
778 GTGCTAC-CGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * * *
4992848 GGGAATGAACACCGTACGCCTAAGTCAACCCACGAAACGAGCGTGTGGACGCTCAGCCGA
842 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * ** * *
4992908 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCAGGTAACCTTCAACGTGCTGTCGATCCTGC
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
* ** ** * **
4992973 GGCCGCAACCCTCGGTCCAATCAAATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCAACTA
66 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* *
4993038 ACGAAACGA----GCGGGCAGGCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCC
131 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * * *
4993099 GTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTCTCCATGCCAATGCCATTT
196 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTT
4993164 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
261 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * ** * * * *
4993229 TCGTTTTCTATTTTTTACGATTTTTGAAACTTTTTGGGGTTTGGGATTTTTTAAATTTTTTTGGA
326 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGA
* * *
4993294 AGGCGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCAAAAAAAAAT
391 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
4993359 TCAGCTAAAAACTCGAAGTGTACAAGACTTTT-TGACCATTTGAAAAAAGTGTCCCCATTTCAGA
456 TCAGCTAAAAACTCGAAGTGTACAAGA-TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
4993423 CACTTTAATGGCTTCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
520 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
4993488 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
585 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
*
4993553 GTGCGCACA-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCG
650 GTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCG
* * * * *
4993617 ATGCTCC-GACGATGGTGCCCCGACGAAGAAAAATACGGCACCAACACATGCGCTAGCCCATCAT
714 ATGCTCCAG-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* ** *
4993681 GTGCTACCGCAACCATCGGTCCAGTCTGATCTTACACTGGGAATGAACTCCGTATGCTTAGACTG
778 GTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * *
4993746 GGAATGAACTTCGTATGCCTAAGTCAACCCACGAAATGAGCGTGTGGGCGCTCAGCCAG
843 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * *
4993805 CCAGAGGGGCGGCATGCGCAAGCCAGGGATCGGTCGGTTCCCCCTCTGA-GTGCTG-CAGATCCT
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCT-ACGTGCTGTC-GATCCT
* * *
4993868 GCTGCCGCAACCCTCGGTCCGGTTTGACCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAAC
64 GCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * *
4993933 CGACG-AA--A----G-GGGCGGGTGGGCGGGCACTACGCCGGCCAGAGAGACGAGATTCGCGAG
129 CGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * *
4993990 CCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGCGTGCCAATGCCAT
194 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCAT
* * *
4994055 TTTTATGGCTTGCAAATTCATGCAATGGTCCCTTAAGCCTTCCCGTGAAGTTTCATGGCAAGACG
259 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * *
4994120 ACTCGTTTTCTATTTTTCATGATTTTCACAAC-TTTTACGGTTCGGGATTTTTTTAAATTTTTTC
324 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
** *
4994184 GGAAGGAGTTTTACCCCCAAACTTGGTAGACGTGATCCTTGTATGTTTGTTGGCATGCACAAAAA
389 -GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * * *
4994249 AATCCAACCAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCA
453 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
4994314 GACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
518 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
4994379 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCGAGTACCAGCACCCATCGCACATC
583 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
4994444 ATGTGCGCACACCCCCCCGTCCCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCTCCG
648 ATGTGCGCACA-CCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCG
* * * *
4994509 GTGATGCTCCGGCGATAGTGCCCCGACGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCCAGC
711 GCGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
4994574 ATGTGCTGCCGCAACCCTCGGT-TCGGTCTGATCTTAGACTGAGAATGAACTCCGTATGCTTAGA
776 ATGTGCTACCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* ** * * *
4994638 CTGGGAATGAACTCCGTATGGCTAAGTCAACAAACGAAACGAGCATGCCGGCTCTCAGCCGG
840 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * *
4994700 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCACCCTCTGCGTGCTGCCGATCCTTC
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
* * ** * *
4994765 TACCGTAACCCTCGGTTTGGTCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCG
66 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* **
4994830 ATGAAACGAGCAGGCGGGCGGGCGGGCGGGCAGGCGGGCACTACGCCGGCCTTAGAGACGGGATG
131 ACGAAAC--G-A-GCGGGCGGGCGGGC--G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATG
* * *
4994895 CGCAAGCCGTGGATCGATAGGGTGGTAAGTGAGTTTAGGCACATCTTCATATTTCTACATGCCAA
188 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAA
* *
4994960 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTCCACGCGAAGTTTCATGGC
253 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * *
4995025 AAGACGACTCGTTTTCTATTTTTCATGATTTTCCAAATTTTTTGCGGTTTGGGA-TTTTTAAAAT
318 AAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAAT
*
4995089 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTTGCATGCA
383 TTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* * *
4995154 TAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCA
447 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
* * *
4995219 ATTTGAGACACTTTAATGGCTACT-ACAGCAAACCTGTGAAATCTCAAATGCTCTTTAAGGGGGT
512 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * *
4995283 GTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGGCCAAGTACCACCACCCATCA
577 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
4995348 CACATCATGTGCGCACACCACCCCTGGCCCCCCGATCATCGGAACCCCAATGCCATCGGTCAGAT
642 CACATCATGTGCGCACACC-CCCC-GGCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGT
* * * * *
4995413 TCTCCGGCAATGATCCAGCGATGGTGCCCTGACGAACAAAAATGTGGCACCAGCACATGCCCGAG
705 TCTCCGGCGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * *
4995478 CCCATCATGTGCTACCACAACCCTCGGTCTGGTCTGATCTTAGTCTGGGAATGAACTCTGTATGC
770 CCCAGCATGTGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGC
* * * * *
4995543 -TAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGGAACGAACGTGCGGGCACTCAACC
835 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCC
4995607 GG
900 GG
* * * * *
4995609 CCAGAGCGGCGGGATTCGCAAGCCGGGAATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTAC
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
* ** * *
4995674 TGTCATAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAACCCAACCG
66 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * * *
4995739 ACGAAATGAGTGGGCGGGCAGGCGGGCGGGCACCACGCCGACCAGAGAGACGGG-TGCGCAAGCC
131 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
4995803 ATGGATTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACCTGCCAATGCCATTT
196 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTT
*
4995868 TTATGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
261 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* **
4995933 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGA
326 TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGA
* * * * *
4995998 AGGAGTTTTGTCCCCAAACTTGGTAGATGTGATGCTTGTATTTTTGTTGGCAAGCACAAAACAAT
391 AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
* *
4996063 TCAGCTAAAAACTAGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
456 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* *
4996128 ATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCGAATGCTCTTTGAA-GGGGTGTGAGTTC
521 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTC
* * * * * *
4996192 TCAAGGTTTGATGAAGGATA-GGGTCCAATATAAAGGCCAAGTACCAGCACCCATCGTACATCAA
585 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
*
4996256 GTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGACGA
650 GTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGA
* * * * * *
4996321 TGCTTCGGTGATGGTGCCCTG-CTGAAGAAAAATGCGGTACCAGCACATGCTCGAGCCCAGCATG
715 TGCTCCAGCGATGGTGCCCCGAC-GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * * * * * * **
4996385 TGTTGCTGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTTCATACACTTAGACTGG
779 TGCTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* * * * *
4996450 GAATGAACTCCGCATGCCTAAGTCAACCCACTAAACGAGCGCGCGGGCGCTCAACCGA
844 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* ** * * * *
4996508 CCAGAGGGTCGGGATGCATAAGTCGGGGATCGGTCGGGTGCCCCTCTACGAGTTG-CTGATCCTG
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTC-GATCCTG
* * *
4996572 TTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACC
65 CTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * *
4996637 GACG-AA--A-CTGGCGGGCGGGCGGGCGGGCACTATGCCGGCCGGAGAGACGGGATGCGCAAGC
130 GACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
4996698 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCTAATGCCATT
195 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
*
4996763 TTTATGGCTTGTAAATTCACACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
260 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
** * * * *
4996828 CTCGTTTTCTATTTTTCATGATTTTTGAACCATTTTGCGGTTTGGGATTTTTTAAAATTTTTTTG
325 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG
* * * * *
4996893 AAAGGATTTTTGTCCCCAAACTTAGTAGTCGTGATTCTTGTATTTTTGTTGGCATGCACAAAAAA
390 -AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
4996958 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
454 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
4997023 ACACTTTAATGGCTACT-GCTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
519 ACACTTTAATGGCTACTGGC-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * *
4997087 TCTCGAGGATTGATGAGGGATATGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACCTC
583 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** * *
4997152 ATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCGTAACGCCACCGGTCAGCTTCTCCG
648 ATGTGCGCACA-CCCCCCG-GCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCG
* * *
4997217 ACGATGCT----C-----TG----G-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCTAGC
711 GCGATGCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * * * *
4997268 ATGTGCTACCGTAACCCTCAGTTTGGTC-CATTCTTAGACTGGGAATGAACTCCATTTGCTTAGA
776 ATGTGCTACCGCAACCCTCGGTCTGGTCTGA-TCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* *
4997332 CTGGGAATGAACTCCG-ATGCCTAAGTCAACCCACGAAATGAGCGCGCGGGCGCTCAGCCGG
840 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
* * * *
4997393 CTAGAGGGGCGGGATGCACAAGTCGGGGATCGGCCGGGTCCCCCT-T---TGC-GT-G----T--
1 CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
* * ** * * *
4997446 TGCCGCAACCCTCAGTCTGGTCCAATCTTAGACTGGGAATGAACTCCATATGCCAAAGCCAACAG
66 TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
* * * *
4997511 AC-AAA--A-TGAGCGGGCGGGCGGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCG
131 ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
4997566 AACCAGCTCA
Statistics
Matches: 4930, Mismatches: 570, Indels: 152
0.87 0.10 0.03
Matches are distributed among these distances:
873 105 0.02
875 1 0.00
879 1 0.00
880 1 0.00
881 1 0.00
884 1 0.00
885 82 0.02
886 99 0.02
887 2 0.00
891 2 0.00
892 30 0.01
893 441 0.09
894 2 0.00
895 364 0.07
896 207 0.04
897 507 0.10
898 194 0.04
899 430 0.09
900 633 0.13
901 529 0.11
902 155 0.03
903 4 0.00
904 319 0.06
905 20 0.00
906 2 0.00
907 8 0.00
909 179 0.04
910 264 0.05
911 334 0.07
912 13 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (901 bp):
CCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTACGTGCTGTCGATCCTGC
TGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
TGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGAT
GCTCCAGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
CTACCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGG
Done.