Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 19268551
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 68000 characters in sequence are not A, C, G, or T
File 49 of 120
Found at i:5619078 original size:895 final size:880
Alignment explanation
Indices: 5616973--5629508 Score: 10683
Period size: 898 Copynumber: 13.9 Consensus size: 880
5616963 CCCCTCTGCC
* * * * * *
5616973 TGCTGTCGATCCTACTACCGCAACCCTGGATCCGATCTGATCTTACACTGGGAATGAACTCCGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
* * * * *
5617038 TGCCTAAGCCAACTGAAG-AA--A-CGAGAGGGCGGGTGGGCACTACGTC-AGCCAGAGAGACGG
66 TGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGA-CCAGAGAGACGG
** **
5617098 GATAAGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTG
130 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* *
5617163 CCAATGCCATTTTT-TGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGCTTCA
195 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
**
5617227 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAC-TTTTT-G--CGGTTCGGGATTT
260 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAGGATTT
* * * * * * *
5617288 TTTAAAATTTTTTTGGAATGATTTTTGGCCCCAAACTTGGTAGGCATGATCCTTTTATTTTTTTT
325 TTTAAAATTTTTTCGG-AGGA-GTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
5617353 GGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGACAATTTGAAAAAA
388 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * * *
5617418 GTGTCCCCATTTCAGACACTTTAATAGCTACTAGCGGCGAACCTGTAAAATCTCAAATGCTCTTT
453 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * *
5617483 AAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTTCTAGC
518 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * ** * * **
5617548 ACCCATCACAGATCATGTGCGCACAACCCCTGGCCCCCCTGATCGTCGGAACCCCAATGCCATCG
583 ACCCATCGCACATCATGTGCGCAC-ACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCG
* * * ** * * *
5617613 GTCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCTCAATGAAGAAAAATGTGGCACCAGGACCT
647 GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACAT
* * ****
5617678 GCTCGAGCCCTGCATGTGCTGTTACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTT
712 GCCCGAGCCCAGCATGTGCTGCCGTAACCCTC--T---G----AT-TT-GA---GG-AT--AC--
* * * *
5617743 CGTATGCTTAGACTGGGAGTGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCG
758 CG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCG
* * **
5617808 CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-AGCCGGGTCCCCCTCTGCG
822 CTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGA-CCGGGTCCCCCTCTATG
* * * * * *
5617867 TGCTGCCGATCCTGCTACTGCAATCCTC-AGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGT
1 TGCTGCCGATCCTACTGCCGCAACCCTCGA-TCCGGTCTAATCTTAGACTGGGAATGAACTCCGT
* *
5617931 ATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGAGCGGGCACTACGTCGGCCAGAGAG
65 ATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGC--G-G-GCGGGCACTACGTCGACCAGAGAG
* * * *
5617996 ACGAGATGCGCAAGCCGTGGATCAATAGGGTGGTAGCTGGGTTTAGGCACATCTTCATATTTTTG
126 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*** *
5618061 CATGCCAATGCTGGTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGT
191 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* **
5618126 TTCATGGC-A-A-GA--CG---TCTATTTTTCACGATTTTTGAAACTTTTTTCGGTTC-G----G
256 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTC-GTTCGGTTTAG
*
5618178 GATTTTTTAAAATTTTTTCGAGAGGAGTTTGGGCCCCAAACATGGTAGACGTGATCCTTGTATTT
320 GATTTTTTAAAATTTTTTCG-GAGGAGTTT-GGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * * *
5618243 TTATTGGCATGCACACAAAAATTCAGCTAAAAACCCGAATTGTACAAGATTTTGTGACCATTTGA
383 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
5618308 AAAAAATGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
448 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * *
5618373 TCTTTAA-GGGTTGTGAGTTCTCGAGGTTTGATGAGGGATTGGCGGCCAATATAAGGGCCAAGTA
513 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * *
5618437 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCGATCGCCAGAACCTCAATGCC
578 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCC
* * * **
5618502 GTCGGTCAGGTTCTCCGACAATGCTCCGATGATGGTGCCCCGGTGAAGAAAAATGCAACACCAGC
643 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGC
*
5618567 ACATGCCCAAGCCCAGCATGTGCTGCCGCT-ACCCTCTG-TTT-A-G-T-CCGAT-CTTAGACTG
708 ACATGCCCGAGCCCAGCATGTGCTGCCG-TAACCCTCTGATTTGAGGATACCGATGCTTAGACTG
* * * * *
5618625 GGAATGAACTCCGTATGCGTAAGTCAACCCACAAAACGAACGTGCGAGCGCTCAGTCGGCCAGAG
772 GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCGCTCAGCCGGCCAGAG
* * * * **
5618690 AGGCGGGATGCGTAAGCCGCGGATCGACCGGGGCCCCCTTTGCG
837 AGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
* * * **
5618734 TGCTGTCGATCCTACTGCTGCAACCCTCAATTTGGTCTAATCTTAGAC-GGCGAATGAACTCCGT
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGG-GAATGAACTCCGT
* * * *
5618798 ATGCCTGAGCCAACAGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGA
65 ATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGG
*
5618863 GATGCGCAAGCCGTGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
130 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
** * * * *
5618928 CCAATGAAATTTTTATGGCTTGTAAATTCATACAATGTTCCTTTAAGCATTCATGTGAAGTTTCA
195 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * * *
5618993 AGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTCAAAAC--TTTT--TTCGGTTCAGGATTT
260 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAGGATTT
* * * * * *
5619054 TTTTAAATTTTTTTGAAAGGATTTTTGGCCCTAAACTTGGTAGACATGATCCTTGTA-TTTTGTT
325 TTTAAAATTTTTTCG-GAGGA-GTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
5619118 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
388 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
** * * *
5619183 -AATCCCCATTTTAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATCTCAAATGCTCTTT
453 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * * * *
5619247 AAGGAGGTGCGAGTTCTCGAGGTTTGATGAAGGATAGGAGGCCAACATAAGGGCCAAGTACCAGC
518 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * *
5619312 ACCCATCGCACATCATGTGCGCACACCCCCTCCGACCCCCCGATCGTCGGAACCCCAATACCG-C
583 ACCCATCGCACATCATGTGCGCACA-CCCC-CCGCCCCCCCGATCGCCGGAACCCCAATGCCGCC
* * * * *
5619376 -GTC-GG---T-C-A-GGTTCTCCGGCGATGGTG-CCTGGTGAAGAAAAATGCGACACCAGCACA
646 GGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACA
* *
5619432 TGCCCAAGCCCAACATGTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACT
711 TGCCCGAGCCCAGCATGTGCTGCCGTAA----C---CC--TCTGAT-TT-GA---GG-AT--AC-
* * * *
5619497 CCATAAGCTTAGACTGGGAATGAACTCCGTATTCCTAAGTCAACCCACGAAACAAGCGTGCGAGC
758 CGAT--GCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGC
* * * * * *
5619562 GCTCAGTCGGCCAAAG-GGGGGAGATGCGCAAGCAG-GAGATCGATC-GGTCCCCCTCTGTG
821 GCTCAGCCGGCCAGAGAGGCGG-GATGCGCAAGCCGAG-GATCGACCGGGTCCCCCTCTATG
* * * * * * *
5619621 TGCTGCCGATCCTGCTGTCGTAACCCTCGATCTGGT-TCAATCTTACACTGGGATTGAACACCGT
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCT-AATCTTAGACTGGGAATGAACTCCGT
* * *
5619685 ATGCCTAAGCCAACCGACGAAGTGAGCGGGAGGGCGGGCGGGCGGGTACTACGTCGGCCAGAGAG
65 ATGCCTAAGCCAACCGACGAAATGAGC----GGGCGGGCGGGCGGGCACTACGTCGACCAGAGAG
** ** * * ** * *
5619750 ACAAGACACACAAGCCATAAATCGATAGGGTGTTAGGTGGGTTTAGGCACATCTTCATATTTTTG
126 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
5619815 CATGGCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
191 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* ** *
5619880 TTCCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACCGTTC-G----
256 TT-CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT-TCGTTCGGTTTA
* * *
5619940 GGATTTTTTAAAATTTTTTCGGAAGAATTTCTGGCCCCAAACTTGGTAGACTTGATCCTTGTATT
319 GGATTTTTTAAAATTTTTTCGG-AGGAGTT-TGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
* *
5620005 TTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
382 TTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
*
5620070 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAATCTCAAATG
447 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
5620135 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
512 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
5620200 ACCAGCACCCATCGCACATCATGTGCGTACACCCCCTGGCCCCCCGGCCCCTCGATCACCGGAAC
577 ACCAGCACCCATCGCACATCATGTGCG--CACACCC---CCCGCC--CCCC-CGATCGCCGGAAC
* * * * *
5620265 CCCAATGCCGCCGGTCAGGTTCTCCGACGATGGTCTGGCGATGGTGACCTGGTGAAGAAAAATGC
634 CCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGC
* * * * *
5620330 GGTACCAGCACATGCCTGAGCCCAGTATGTGCTGCCGTAACACTC-G----GTGG-T-CCGAT-C
699 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCTGATTTGAGGATACCGATGC
* * * *
5620387 TTAGACTGGGAATGAACTTCGTATGCGTAAGTCAACCCACAAAACGAGCGTGCGAGCGCTCAGCC
764 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCGCTCAGCC
* * **
5620452 GGCTAGA-AGAGCGGGATGCGCAAGCCGAGGATCGACCGAGTCCCCCTCTACA
829 GGCCAGAGAG-GCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
* * * ** * *
5620504 TGCTGCCAATCCTGCTACTACAACCCTCGGTCCGGTCCAATCTTAGACTGGGAATGAACTCCGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
* *
5620569 TGCCTAAGCTAACCGACGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGA
66 TGCCTAAGCCAACCGACGAAATGA---G-CGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGA
*
5620634 CGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
127 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
*
5620699 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTT
192 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
*
5620764 TCATGGCAAGACGACTCGTTTTCTATTTTTCCTGATTTTCAAAAC-TTTTT-G--CGGTTT-GAG
257 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAG-G
* * *
5620824 ATTTTTTTAAATTTTTTCGGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGCATTTT
321 ATTTTTTAAAATTTTTTCGG-AGGAG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * *
5620889 TTTTTGCATGCACAAAAAAATTCAGCTAAAAACGCGAAGTGTACAAGATTTTGTGACCATTTGAA
384 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
5620954 AAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGGAAACCTGTAAAATCTCAAATGCT
449 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
* * * *
5621019 CTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATAAGGGACA-GGGGCCAATATAAGGACCAAGTAC
514 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* *
5621083 CAGCACCCATCGCACATCATGTGCGTACACCCCCCGCCCCCCGGCCCCTCGATCACCGGAACCCC
579 CAGCACCCATCGCACATCATGTGCGCACACCCCCCG----CC--CCCC-CGATCGCCGGAACCCC
* * * * *
5621148 AATGCCACCGGTCAGGTTCTCCGACGATGGTCTGGCGATGGTGACCCGGTGAAGAAAAATGCGGC
637 AATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGC
* * * * *
5621213 ACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACACTC-G----GTGG-T-TCGAT-CTTA
702 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCTGATTTGAGGATACCGATGCTTA
* *
5621270 GACTGGGAATGAACTTCGTATGCATAAGTCAACCCACGAAACGAGCGTACGAGCGCTCAGCCGGC
767 GACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCGCTCAGCCGGC
* * *
5621335 CAGAGGGGCGGGATGCGCAAGCCGAGGATCGACCGAGTCCCCCTCTACG
832 CAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
* * * * * *
5621384 TGCTGCCAATCCTACTACCGCAACCCTCGGTCTGGTCCAATCTTAG-CTGGGAATGAACTCCATA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
*
5621448 TGCCTAAGCTAACCGACGAAACAAGTG-GACGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAG
66 TGCCTAAGCCAACCGACG--A-AA-TGAG-CGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAG
* * *
5621512 ACGGTATGCGCAAGCCGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTC
126 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* *
5621577 CATGCCAATGCCATTTTTATGGCTTCTAAATTTATACAATGGTCCCTTAAGCCTTCACGTGAAGT
191 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* *
5621642 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACT-ATTTTCAAAAC--TTTT--TACGGTTCAG
256 TTCATGGCAAGACGACTCGTTTTCTATTTTTCA-TGATTTTCAAAACTTTTTTCGTTCGGTTTAG
* * *
5621702 GATTTTTTAAAATTTTTTCGAAGAGAGTTTTGGCCGCAAACTTGGTAGACGTGATCCTTCTA-TT
320 GATTTTTTAAAATTTTTTCGGAG-GAG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
5621766 TTATTGGCATGCAC-AAAAAATTCAGCTAAAAA-TC-AAATGTACAAGATTTTGTGACCATTTG-
383 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
5621827 AAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
448 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
5621892 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
513 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
5621957 CCAGTACCCATCGTACATCATTTGCGCACACCCCCCCTGGCCCCCCCGATCGTCAGAACCCCAAC
578 CCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC--GCCCCCCCGATCGCCGGAACCCCAAT
* * *
5622022 GCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACC
640 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACC
5622087 AGCACATGCCCGAGCCCAGCATGTGCTGCC--ACACCCTCGGTTTGGTTCGATCTTAGATTGGGA
705 AGCACATGCCCGAGCCCAGCATGTGCTGCCGTA-ACCCTC--------T-GAT-TT-GA---GG-
* * * *
5622150 ATGAACTTCATATGCTTAGACTGGGAATGCACTCCGTATGCCTAAGTCAACCCATGAAACGAGCA
754 AT--AC--C-GATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * *
5622215 TACGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGTCGGGGAACGACCGGGTCCCCCTCTA
814 TACGAGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTA
5622280 TG
879 TG
* * * * * * * *
5622282 TGCTGCTGATCCTAGTGCCACAACCCTCGATCCAGTATGATCTTAGACTGGGAATGATCTTCGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
* * * *
5622347 TGCCTAAGCCAACCGATGAAGCGA-GCAGGCGGGCAGGCGGGCGAGCACTACGCCGACCAGAGAG
66 TGCCTAAGCCAACCGACGAA---ATG-A-GCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAG
* * *
5622411 ACGGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTA
126 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* *
5622476 CGTGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
191 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * * ** * * *
5622541 TTCATAGCAAGACAACTCGTTTTTTATTTCTCATGATTTTTGAAAC-TTTTT-G--CAGTTCAAG
256 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAGG
*
5622602 ATTTTTTAAAATTTTTTCGGAAGGAGTTTCAAG-CCCAAACTTGGTAGACGTGATCCTTGTATTT
321 ATTTTTTAAAATTTTTTCGG-AGGAGTTT--GGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
5622666 TTGTTGGCATGTACAAAAAAATTCAGC-AAAAGACTGGAAGTGTACAAGATTTTGTGACCATTTG
383 TTGTTGGCATGCACAAAAAAATTCAGCTAAAA-ACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * * *
5622730 AAACAACTATCCCCATTTCAGCCACTTTAATGGCTACTGGCAGTAAACCTGTAAAATCTCAAATG
447 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
5622795 CTCTTTACGGGGG-GCTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
512 CTCTTTAAGGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* * * * * *
5622859 TACCAGCACCCATCACAAATCATGTGCACACACCCCCCGGCCCCACGATCGCCTGAACCCCAATG
576 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATG
* * *
5622924 CCGTCC-ATCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACC
641 CCG-CCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACC
5622988 AGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTTCGATCTTAGATTGGGAA
705 AGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CC-C--TC----T-GAT-TT-GA---GG-A
* * *
5623053 TGAACTTCATATGCTTAGACTGGGAATGCACTCCGTATGCCTAAGTCAACCCACGAAACGAGCAT
755 T--AC--C-GATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * *
5623118 ACGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGTCGGGGAACGACCGGGTCCCCCTCTAT
815 ACGAGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTAT
5623183 G
880 G
* * * * * * * *
5623184 TGCTGCTGATCCTAGTGCCACAACCCTCGATCCAGTATGATCTTAGACTGGGAATGATCTTCGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
* * * *
5623249 TGCCTAAGCCAACCGATGAAGCGA-GCAGGCGGGCAGGCGGGCGAGCACTACGCCGACCAGAGAG
66 TGCCTAAGCCAACCGACGAA---ATG-A-GCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAG
5623313 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
126 ACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
*
5623378 CATGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
191 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * *
5623443 TTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAACTATTTGCTGTTC-G----G
256 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTC-GTTCGGTTTAG
* *
5623503 GATTTTTTAAAATATTTTT-GAAAGGAGTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
320 GATTTTTTAAAAT-TTTTTCG-GAGGAGTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* *
5623567 TTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTATCACCATTTGA
383 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* *
5623631 GAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGC
448 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * * * *
5623696 TCTTTGAGGGGGTGTGAGTTCTTGAGGTTTGATGGGGGAAAAGGGGCCAATATAAGGTCCAAGTA
513 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
** **
5623761 CCAGCACCCATCTTACATCATGTGCGCACACCCCTCCAGGCCCCCCCGATCATCGGAACCCCAAT
578 CCAGCACCCATCGCACATCATGTGCGCACACCCC-CC--GCCCCCCCGATCGCCGGAACCCCAAT
* * * *
5623826 GCCACCGGTCAGGTTCTCCAACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATACGG-TCC
640 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACC
* **
5623890 AGCACATGCCCGATCCCAGCATGTGCTGCCACAACCCTTGGTCCGGTCTGATCTTAGACTGGGAA
705 AGCACATGCCCGAGCCCAGCATGTGCTGCCGTAA--C-----CC--TCTGAT-TT-GA---GG-A
* * ** *
5623955 TGAACTCCCTATGCTTAGACTGGGAATAAACTTTGTATGCCTAAGTCAACCCACGAAACGAGTGT
755 T--A---CCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * * * *
5624020 ACCG-GCGCTCAGCCAGCCAGAGGGGCTGGATGTGAAAGCTGAGGATCGACCGAGTCCCCCTCTG
815 A-CGAGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTA
5624084 TG
879 TG
* * * *
5624086 TGCTGTCGATCCTGCTACCGCAACCCTTC-ATCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
1 TGCTGCCGATCCTACTGCCGCAACCC-TCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGT
* * * * * * * *
5624150 AAGCCTAAGCCAACCGACGAAACGAGCGGAC--G-GGGCGGGCACTACGCCAACTAGAGAAATGG
65 ATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGG
* *
5624212 GATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTG
130 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* *
5624277 CCAATGACATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
195 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
** **
5624342 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAAC-TTTTT-G-T-GGTTCGGGATTT
260 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAGGATTT
* * ** *
5624403 TTTAAAATTTTTTAGGAAGGATTTTTGGCCCCAAACTTGGTAGGTGTGATCCTTGTATTTTTTTT
325 TTTAAAATTTTTTCGG-AGGA-GTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
* *
5624468 GGCATGCA-AAAAAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATGTGAAAAAA
388 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * * *
5624532 GTGTCCCCATTTCATACACTTTAATGGCTACTCGTAGCAATCCTGTAAAATCTCAAATGCTCTTT
453 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* *
5624597 AAGGGGGTGAGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
518 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
5624662 ACCCATCGCACATCATGTGCACACATCCCCCCGGCCCTCCGATCGTCGGAACCCCAATGCCGTCG
583 ACCCATCGCACATCATGTGCGCACA-CCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCG
* *** **
5624727 GTCAGCTTCTCCGACGATGCTCC-AGCGATGGTGCCCCGACAAAGAAAAATGCGGCTTCAGCACA
647 GTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACA
* *
5624791 TGCCTGAGCCCAGCATGTGCTACCGTAACCCTCGGTTCGATCCAATCTTAGACTGTGAATGAACT
711 TGCCCGAGCCCAGCATGTGCTGCCGTAACCCTC---T-G-----AT-TT-GA--G-G-AT--A--
* * * * * * *
5624856 CCGTATGCTTAGACTGGGAATGAACTCCATATGCCGAAGTCAACCTACGAAATGAACGTGCGGGC
757 CCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGC
* * * * * * * * ***
5624921 GCTAAGCCGGCCAGAGGGGCGGGCTGCGTAAGTCGGGGATCGATCGCGTCCCCCTCTGCA
821 GCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
* * * * **
5624981 TGCTACCGATCCTGCTACTGCAACCCTC-AGTCCGGTCCCATCTTAGACTGGGAATGAACTCCGT
1 TGCTGCCGATCCTACTGCCGCAACCCTCGA-TCCGGTCTAATCTTAGACTGGGAATGAACTCCGT
** * * * * * *** **
5625045 ATGCCTAAGATAAACTGACGAAACGAGCGGACGGGCGGGCAGGATGCGC-AAGTCGGGGATTG-G
65 ATGCCTAAG-CCAACCGACGAAATGAGCGGGCGGGCGGGC-GG--GCACTACGTCGACCAGAGAG
* * *** * ** * ** * * ****
5625108 CCGGG-T-CCCCCTCTACGTGCTG-CCGATCCTGCTGCCGTAACCCTTGGTCTAGTTTGATCTTA
126 ACGGGATGCGCAAGC--CGTG--GATCGAT-AGGGTG--GT-A-GGTGGGTTTAGGCACATCTT-
* * * * ** ** ** ****** **
5625170 GACTGGGAATGATCTCCGTATGCCTAAGCCAACCGACAAAATGAATGGGCGGGCGGGCGGGCAGG
181 --C-----AT-AT-T---TCTG-C-ATGCCAA-TG-CCATTTTTAT-GGC--TTGTAAATTCATA
* * * * *** * * * ** * *
5625235 CACTGCGTCGACTAGAGAGACGGGATGCGCAAG--CCATGGATCGATAGGGTGGTAGGTGGGTTT
227 CAATG-GTC-CCT-TA-AGCCTTCACGTG-AAGTTTCATGG--C-A-A--GACG-A-CT-CGTTT
* * * * * * * ** *
5625298 AGGC-ACATCTTCAT-ATTTCTGCATGCCAATGCCATTTTT--AT-GGCTTGTA--AATTCATAC
278 --TCTA-TTTTTCATGATTT-T-CA----AA--ACTTTTTTCGTTCGG-TT-TAGGATTTTTTAA
** ** ** * ** *** * * * * * * * *
5625356 AATGGTCCCTTA--AGCCTTCACGTGAAGTTTCATGGCAAGAC--GACTCGTTTTCTATTT-TTC
330 AATTTTTTCGGAGGAG-TTTGGCCCCAA---ACTTGG-TAGACGTGA-TCCTTGTATTTTTGTTG
* **** **** * * **** ** * * * * *
5625416 ACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTTAAATTTTTTCGAAAGGAGTTTTGGGCCC
389 GC-A-TGCACAAAAAAATT-CAG-CT-A-A-AAACTCGAA-GTGTAC--AA-GA-TTTTGTGACC
* * * ** ** * ** ** * *
5625481 AAACTTAGTAAACA-TGAT---C-TTT--GTA-TTTTTTTTGGCAAGC-GAAAAAAAAATTCAGC
442 --A-TTTGAAAAAAGTG-TCCCCATTTCAG-ACACTTTAATGGCTA-CTG-GCAGCAAA-CCTG-
* **** **
5625537 TAAAAACTCGAAGTGCACAAGATGTTTTGACCATTTGAAAAAAGTGTCCCGA-TT-TCAGACACT
498 T-AAAA-TC----T---CAA-ATG--CT---C-TTT-AAGGGGGTGT---GAGTTCTC-GA-GGT
* * **** * **
5625600 TTAATGGCTACTGGCA-A-CAAACCTATAAAATCTAAAACGCTCTTTAAGGGGGTGTGAGTTCTC
541 TTGAT-G--A--GGGATAGGGGGCC-----AATAT-AAGGGC-C---AA------GT-A---C-C
***** * * * * * * ** *
5625663 GAGGTTTAATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAACACCC-ATCCCAC-ATCAT
580 -AGCACCCAT--CGCACA-----TC-ATGT--GCG-C-A-CACC--C-CCCGCCCCCCCGATC--
* * *** * * * *
5625726 G-TGTGCACCCCCCGGCCCCCCCGATC--G-TCAGAACC-CCGATGCCACCGGTCAGGTTCTCCG
626 GCCG-GAACCCCAATG--CCGCCGGTCAGGTTC---TCCGAC---G--A----T---G-----C-
** *
5625786 GTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGC
667 -T------CCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* *
5625851 ATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTAGACTGTGAATGAACTCCATATGCTTAGAC
725 ATGTGCTGCCGTAA-CC-C--T-C--T--GAT-TT-GA--G-G-AT--A--CC-GATGCTTAGAC
* * * *
5625916 TGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAACGTGA-GGGCGCTCAGCCGGCCA
770 TGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGT-ACGAGCGCTCAGCCGGCCA
* * * * * * * **
5625980 GAGGGGCAGGCTGCGTAAGCCGGGGATC-AGTCGGGT--CCTTCTGCG
834 GAGAGGCGGGATGCGCAAGCCGAGGATCGA-CCGGGTCCCCCTCTATG
* * * * * ** *
5626025 TGCTGCCGATCTTGCTGCCGCAACCCTC-AGTTCAGTCTGATCTTAG-CTGGGAATGAAGGCTGT
1 TGCTGCCGATCCTACTGCCGCAACCCTCGA-TCCGGTCTAATCTTAGACTGGGAATGAACTCCGT
* * * * * * *
5626088 ATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGAGCGGGCATTACGCCGGCCAGAGACACGG
65 ATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGG
* * ***
5626153 GATGCGCAAGCTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTG
130 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
5626218 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
195 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * * *
5626283 TGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTATTTGCTATTC-G----GGATT
260 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTC-GTTCGGTTTAGGATT
* * *
5626343 TTTTAAAACATTTTT-GAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTG
324 TTTTAAAA-TTTTTTCG-GAGGAG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * *
5626407 TTGGCATGCACAAAAACATTCAGCTAAAAAGTCGAAGTCTACAAGATTTTGTGACCATTTGAAAA
386 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
* *
5626472 AAGTGTCCCCATTTCAGACACTTTAATGGCTAGTGGCAACAAACCTGTAAAATCTCAAATGCTCT
451 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* * * *
5626537 TTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGACAGGTGGCCAATATAAGGGCCAAGCACCA
516 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * **
5626602 GCACCCATCGCACATCGTGTGCGCACACCCCCCGGTCCCCCCGATCATCGGAACCCCAATGCCGC
581 GCACCCATCGCACATCATGTGCGCACACCCCCC-GCCCCCCCGATCGCCGGAACCCCAATGCCGC
* * * *
5626667 TGGTCAGCTTCTCTGACGATGCTCCGATGATGGTGCCCCAGG-GAAGAAAAATGCGGCACCAGCA
645 CGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCC-GGTGAAGAAAAATGCGGCACCAGCA
*
5626731 CATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAGTGAA
709 CATGCCCGAGCCCAGCATGTGCTGCCGTAA-CC-C--T-C--T--GAT-TT-GA---GGA-T--A
* * * * *
5626796 CTCCCTATGCTTAGACGGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAATGAGCGTGCGA
757 ---CCGATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGA
* * * * * ** * *
5626861 CCGCTCAGCCGGCCAGAGGGGCAGGATGCGAAAGTCGAGGATCGGTCGTGTCCCCCTCTACG
819 GCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
* ** * * * * ** *
5626923 TGCTACCGATCCTGTTGCTGTAACCCTCGGTCCGATCCCATCTTAGACTGGGAATGAACTCTGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
** * ** * * * *
5626988 TGCCTAAGATAAACCGATGAAACAAGCGGGCAGACGGGCGGGCACTACGCCGGCCAGAGAGACGG
66 TGCCTAAG-CCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGG
* * *
5627053 GATGCGCAAGCCTTGGATTC-ATAGGGTGGTAGGTGGGTTTACGCATATCTTCATATTTCT--AT
130 GATGCGCAAGCCGTGGA-TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* * ** *
5627115 GCGCCATTGCCATTTTTATGGCATGTAAATTCATACTCTGGTCCCTTAAGCCTTCACATGAAGTT
194 --GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
5627180 TCATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTCAAAAATTTTTACGGTTC-G----GG
257 TCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTC-GTTCGGTTTAGG
* * *
5627240 ATTTTTTAAAATTTTTGCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATTCTTGTATTTT
321 ATTTTTTAAAATTTTTTCG-GAGGAG-TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * *
5627305 TGTTTGCATGCACAAAAACATTTAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAA
384 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* * * * *
5627370 AAAAGTGT-CCCAATTCAGACACTTTAATAGCTACTAGCAGCAAACCTGGACAATCTCAAATGCT
449 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
*
5627434 CTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
514 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * * **
5627498 CAGCACCCATCTCACATCATGTGCGCACACCCCTCGACCCCCCCGATCGTCGGAAAGCCAATGCC
579 CAGCACCCATCGCACATCATGTGCGCACACCCCCCG-CCCCCCCGATCGCCGGAACCCCAATGCC
* * * * ** * **
5627563 GCTGGTCAAGTTCTCCGATGATGATCCGGTGATGGTGCCCTGACGAAGAAAAATGCGGCACCAGC
643 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGC
* **
5627628 ACATGCCCGAGACCAGCATGTGCTATCGTAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGA
708 ACATGCCCGAGCCCAGCATGTGCTGCCGTAA-CC-C--T-C---T-GAT-TT-GA---GG-AT--
* *
5627693 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCG
756 A--CCG-ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACG
* * * * * * * * **
5627758 GGCTCTCAGTCGGCCAGAGGGGTGGGATGTGTAAGCCGCGGATCGGTCGGGTCCCCCTCTATG
818 AGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
* * * * * ** *
5627821 TGCTACCGATCCTGCTACCGTAACCCTTGATCCGGTCCGATCTTAGACTTGGAATGAACTCCGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
* * * * * *
5627886 TGCCTAAGCCAATCGACGAAATGAGCGGGCGTGCGGGCAGGTACTACGTCGGCCAGAGAGACAGG
66 TGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGG
* *** * *
5627951 ATGTGCAAGCCAACCGATCGATAGGGTGGTAGGAGGGTTTAGGCACATCTTCATATTTCTACATG
131 ATGCGCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* * *
5628016 CCAATGCCATTTCTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCATGTGAAGTTTCA
195 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* ** *
5628081 TGGCAAGACGGCTCGTTTTCTATTTTTCATGATTTTTGAAAC--TTTT--TACGGTTTAGGATTT
260 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAGGATTT
* * * * * * * * * *
5628142 TTAAAAATTTTTTTAGACAGAATTTTCGCCCCAAACTTAGTAGACGTGATTCTTGTTTTTTTTTT
325 TTTAAAA-TTTTTTCG-GAGGAGTTTGGCCCCAAACTTGGTAGACGTGATCCTTG-TATTTTTGT
* * *
5628207 TGGGATGCACAAAAAAATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
387 TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAA
* * *
5628272 AGTGTCCCCATTTCAGACAGTTTAATGGCTACTGGTAGCAAACCTGTAAAATATCAAATGCTCTT
452 AGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * * * *
5628337 TAAGGGGGTGTAAGTTCTCGAGGTTTGATTAGGGATAGGGGGCCAACATAAGGGCTAAGCACCAG
517 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* ** *
5628402 CACCCATCGCACATCATTTGCG--CACCCCCCAACCCCCCGATCGCCGGAACCCCAATGCCGTCG
582 CACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCG
* ** * *
5628465 GTCAGGTTCTCCGACGATGCTCCGACGATGGTGACCCGACGAAGAAAAATGCGACACCAGCAAAT
647 GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACAT
* * * *
5628530 GCTCGAGCCCTGCATGTGCT-CTGCAACCCTCGGTCAGATCTGATCTTAGACTGGGAATCAACTC
712 GCCCGAGCCCAGCATGTGCTGCCGTAA--C-C---C---TCTGAT-TT-GA---GG-AT--A--C
* * *
5628594 CGTATGCTTAGACTGGGAATGAACTTCGTATGCTTAAGTCAAAGTCAACCCACGAAACGAGCGTG
758 CG-ATGCTTAGACTGGGAATGAACTCCGTATGC------CTAAGTCAACCCACGAAACGAGCGTA
* * * * * * * * **
5628659 C-AGGCACTCAACCGACCAGAGGGGCGAGATGCACAAGCTGGGGATCGACCGGGTCCCCCTCTGC
816 CGA-GCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTAT
*
5628723 A
880 G
* * * * * * * ** *
5628724 TGCTGTCGATCTTGCTACTGCAACCCTCGATCTGATCCGATCTTAGATTGGGAATGAACTCCGTA
1 TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
* * * * * ***
5628789 TGCCTAAGCCAATCGACGAAACGAGCGGGCGGGCGGACGGGCGGGCACCATGCCGGGTAGAGAGA
66 TGCCTAAGCCAACCGACGAAATGAGCGGGC--G-GG-CGGGCGGGCACTACGTCGACCAGAGAGA
* * *
5628854 CGGGATGCGCAAGCCGTTGATCGGTAGGATGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
127 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC
* *
5628919 ATGCCAATGCCATTTTTTATGGCTTGTAAATCCATACAATGGTCCCTTAAGCCTTCACGGGAAGT
192 ATGCCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
** ** *
5628984 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTACGGTTC-G----G
256 TTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTC-GTTCGGTTTAG
* *
5629044 GATTTTTTAAAATTTTTTCGGAAGGATTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTT
320 GATTTTTTAAAATTTTTTCGG-AGGA-GTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
5629109 TTGTTAGCATGTACAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
383 TTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
*
5629174 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAACGC
448 AAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGC
* * * *
5629239 TCTTTAAGGGGGTGTGACTTCTCGATGTTTGCTGAGGGATAGGGGGCCAATATCAGGGCCAAGTA
513 TCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTA
* * * * * *
5629304 CCACCACCCACCGCACATCATGTGCTCACACCCCCCGGCCCCCCGATCGCCGGAACCTCAATACC
578 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCC
* * * * * * * *
5629369 GTCAGTCAAGTTCTCCG-GGATGCTCCAACGATGGTGCCCCAGCGAAGAAAAATGCGACACCAGC
643 GCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGC
* * * * *
5629433 ACATGCCCGAGCCCATCATGTGCTGCCGTAACACTC-GGTTT--GG-T-TCGAT-CTTAGATTGG
708 ACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCTGATTTGAGGATACCGATGCTTAGACTGG
5629492 GAATGAACTCCGTATGC
773 GAATGAACTCCGTATGC
5629509 TTAGACTGGG
Statistics
Matches: 9733, Mismatches: 1364, Indels: 1102
0.80 0.11 0.09
Matches are distributed among these distances:
861 1 0.00
862 53 0.01
863 161 0.02
864 3 0.00
865 3 0.00
866 8 0.00
867 192 0.02
868 6 0.00
869 73 0.01
870 156 0.02
871 185 0.02
872 36 0.00
873 2 0.00
874 103 0.01
875 75 0.01
876 11 0.00
877 19 0.00
878 22 0.00
879 303 0.03
880 293 0.03
881 56 0.01
882 373 0.04
883 246 0.03
884 3 0.00
885 6 0.00
886 6 0.00
887 90 0.01
888 91 0.01
889 5 0.00
890 1 0.00
891 159 0.02
892 91 0.01
893 184 0.02
894 387 0.04
895 617 0.06
896 464 0.05
897 138 0.01
898 881 0.09
899 468 0.05
900 639 0.07
901 268 0.03
902 804 0.08
903 334 0.03
904 148 0.02
905 4 0.00
906 285 0.03
907 234 0.02
908 54 0.01
909 19 0.00
910 52 0.01
911 1 0.00
912 3 0.00
914 2 0.00
915 2 0.00
916 2 0.00
918 1 0.00
919 3 0.00
920 8 0.00
921 9 0.00
922 9 0.00
923 11 0.00
924 9 0.00
925 1 0.00
926 7 0.00
927 5 0.00
928 2 0.00
929 8 0.00
930 7 0.00
931 4 0.00
932 1 0.00
933 1 0.00
935 6 0.00
936 1 0.00
937 5 0.00
938 5 0.00
939 6 0.00
940 8 0.00
942 1 0.00
943 1 0.00
945 8 0.00
947 7 0.00
948 31 0.00
949 7 0.00
950 5 0.00
951 1 0.00
952 2 0.00
953 5 0.00
954 5 0.00
955 3 0.00
956 3 0.00
957 11 0.00
958 8 0.00
959 10 0.00
960 10 0.00
961 5 0.00
962 12 0.00
963 10 0.00
964 2 0.00
965 6 0.00
966 4 0.00
967 1 0.00
969 3 0.00
970 4 0.00
972 4 0.00
973 3 0.00
975 1 0.00
976 4 0.00
977 5 0.00
978 1 0.00
979 12 0.00
980 12 0.00
981 5 0.00
982 10 0.00
983 10 0.00
984 9 0.00
985 13 0.00
986 3 0.00
987 3 0.00
988 5 0.00
989 5 0.00
990 2 0.00
991 2 0.00
992 9 0.00
993 23 0.00
994 11 0.00
996 9 0.00
997 2 0.00
999 2 0.00
1000 3 0.00
1001 8 0.00
1002 5 0.00
1003 5 0.00
1004 2 0.00
1005 5 0.00
1006 2 0.00
1007 4 0.00
1008 1 0.00
1009 1 0.00
1010 4 0.00
1011 6 0.00
1012 7 0.00
1013 5 0.00
1014 3 0.00
1015 8 0.00
1016 1 0.00
1017 6 0.00
1018 9 0.00
1019 8 0.00
1020 16 0.00
1021 1 0.00
1022 10 0.00
1024 351 0.04
1025 323 0.03
1026 309 0.03
1027 315 0.03
1028 270 0.03
1029 220 0.02
1030 271 0.03
1031 334 0.03
1032 282 0.03
1033 295 0.03
1034 211 0.02
1035 238 0.02
1036 841 0.09
1037 203 0.02
1038 208 0.02
1039 260 0.03
1040 213 0.02
1041 181 0.02
1042 189 0.02
1043 204 0.02
1044 177 0.02
1045 362 0.04
1046 337 0.03
1047 240 0.02
1048 146 0.02
1049 111 0.01
1050 109 0.01
1051 129 0.01
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (880 bp):
TGCTGCCGATCCTACTGCCGCAACCCTCGATCCGGTCTAATCTTAGACTGGGAATGAACTCCGTA
TGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGACCAGAGAGACGGG
ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGC
CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
GGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTTCGTTCGGTTTAGGATTTT
TTAAAATTTTTTCGGAGGAGTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
ATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
CATCGCACATCATGTGCGCACACCCCCCGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCA
GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCC
GAGCCCAGCATGTGCTGCCGTAACCCTCTGATTTGAGGATACCGATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGAGCGCTCAGCCGGCCAGAGAGGCGGGAT
GCGCAAGCCGAGGATCGACCGGGTCCCCCTCTATG
Found at i:5622189 original size:26 final size:26
Alignment explanation
Indices: 5622138--5622190 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5622128 TTGGTTCGAT
* *
5622138 CTTAGATTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
5622164 CTTAGACTGGGAATGCACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5622190 C
1 C
5622191 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5623091 original size:26 final size:26
Alignment explanation
Indices: 5623040--5623092 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5623030 CTGGTTCGAT
* *
5623040 CTTAGATTGGGAATGAACTTCATATG
1 CTTAGACTGGGAATGAACTCCATATG
* *
5623066 CTTAGACTGGGAATGCACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5623092 C
1 C
5623093 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5623246 original size:902 final size:902
Alignment explanation
Indices: 5616960--5629608 Score: 13004
Period size: 902 Copynumber: 14.0 Consensus size: 902
5616950 GATTGGTTGA
* * * * * *
5616960 GTCCCCCTCTGCCTGCTGTCGATCCTACTACCGCAACCCTGGATCCGATCTGATCTTACACTGGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
* * *
5617025 AATGAACTCCGTATGCCTAAGCCAACTGAAGAAACGAG-A-------GGGCGGGTGGGCACTACG
66 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTACG
* * **
5617082 TCAGCCAGAGAGACGGGATAAGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
131 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
** *
5617147 TTCATATTTCTGTGTGCCAATGCCATTTTT-TGGCTTGTAAATTCATACAATGGTCCCCTAAGCC
196 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
5617211 TTCACGTGAAGCTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGC
261 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTAC
* * * * *
5617276 GGTTCGGGATTTTTTAAAATTTTTTTGGAATGATTTTTGGCCCCAAACTTGGTAGGCATGATCCT
326 GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* * *
5617341 TTTATTTTTTTTGGCATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTTTGTGAC
391 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* * * * *
5617406 AATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTAGCGGCGAACCTGTAAAATCT
456 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
*
5617471 CAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
521 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * * * *
5617536 CCAAGTTCTAGCACCCATCACAGATCATGTGCGCACAACCCCTGGCCCCCCTGATCGTCGGAACC
586 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-GATCGTCGGAACC
* * * * * ** *
5617601 CCAATGCCATCGGTCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCTCAATGAAGAAAAATGTG
650 CCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCG
* * * * **** * *
5617666 GCACCAGGACCTGCTCGAGCCCTGCATGTGCTGTTACAACCCTCGGTCCGGTCCAATCTTAGACT
715 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAGACT
* * *
5617731 GGGAATGAACTTCGTATGCTTAGACTGGGAGTGAACTCCGTATGCCTAAGTCAACCCACAAAACG
780 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
5617796 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-AGCCGG
845 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGG
* * *
5617854 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACTGCAATCCTC-AGTCTGGTCTGATCTTAGACTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGG
* *
5617918 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGAGCGGGCACTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
* * * *
5617983 GTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCAATAGGGTGGTAGCTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *** *
5618048 CTTCATATTTTTGCATGCCAATGCTGGTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGA
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* ** *
5618113 CTTCACGTGAAGTTTCATGGC-A-A-GA--CG---TCTATTTTTCACGATTTTTGAAACTTTTTT
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* *
5618170 CGGTTCGGGATTTTTTAAAATTTTTTC-GAGAGGAGTTTGGGCCCCAAACATGGTAGACGTGATC
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * * *
5618234 CTTGTATTTTTATTGGCATGCACACAAAAATTCAGCTAAAAACCCGAATTGTACAAGATTTTGTG
389 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
5618299 ACCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
454 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
5618364 CTCAAATGCTCTTTAA-GGGTTGTGAGTTCTCGAGGTTTGATGAGGGATTGGCGGCCAATATAAG
519 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
5618428 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCCGATCGCCAGAAC
584 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAAC
* * * *
5618493 CTCAATGCCGTCGGTCAGGTTCTCCGACAATGCTCCGATGATGGTGCCCCGGTGAAGAAAAATGC
649 CCCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGC
** *
5618558 AACACCAGCACATGCCCAAGCCCAGCATGTGCTGCCGCT-A-CC-C--T-C---T-G---TT---
714 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG-TAACCCTCGGTCCGGTTCGATCTTAGA
* *
5618607 -T----A-G---TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGCGTAAGTCAACCCACAAAA
778 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * *
5618661 CGAACGTGCGAGCGCTCAGTCGGCCAGAGAGGCGGGATGCGTAAGCCGCGGATCGACCGG
843 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
* * * * * * * ** *
5618721 GGCCCCCTTTGCGTGCTGTCGATCCTACTGCTGCAACCCTCAATTTGGTCTAATCTTAGAC-GGC
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGG-
* * *
5618785 GAATGAACTCCGTATGCCTGAGCCAACAGACGAAA--TG-A-GCGGGCGGGCGGGCGGGCACTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
* * *
5618846 GTCGGCCAGAGAGACGAGATGCGCAAGCCGTGGATCGATAGCGTGGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
** * *
5618911 CTTCATATTTCTGCATGCCAATGAAATTTTTATGGCTTGTAAATTCATACAATGTTCCTTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * * * *
5618976 ATTCATGTGAAGTTTCAAGGCAAGACAACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTT
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* * * * * * *
5619041 CGGTTCAGGATTTTTTTAAATTTTTTTGAAAGGATTTTTGGCCCTAAACTTGGTAGACATGATCC
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
5619106 TTGTA-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
390 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
** * * *
5619170 CCATTTGAAAAAA-AATCCCCATTTTAGACACTTTAATTGCTACTGGTAGCAAACCTGTAAAATC
455 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * * * *
5619234 TCAAATGCTCTTTAAGGAGGTGCGAGTTCTCGAGGTTTGATGAAGGATAGGAGGCCAACATAAGG
520 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
*
5619299 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCCGACCCCCCGATCGTCGGAA
585 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC-CCGGCCCCCCGATCGTCGGAA
* * * * *
5619364 CCCCAATACCG--CGTC-GG---T-C-A-GGTTCTCCGGCGATGGTG-CCTGGTGAAGAAAAATG
648 CCCCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATG
* * *
5619419 CGACACCAGCACATGCCCAAGCCCAACATGTGCTGCCGTAACCCTCGGTCCGG-TCTGATCTTAG
713 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTC-GATCTTAG
* * *
5619483 ACTGGGAATGAACTCCATAAGCTTAGACTGGGAATGAACTCCGTATTCCTAAGTCAACCCACGAA
777 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * * * * *
5619548 ACAAGCGTGCGAGCGCTCAGTCGGCCAAAGGGG-GGAGATGCGCAAGCAGGAGATCGATC-G
842 ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG-GATGCGCAAGCCGGGGATCGACCGG
* ** * * * *
5619608 GTCCCCCTCTGTGTGCTGCCGATCCTGCTGTCGTAACCCTCGATCTGGT-TCAATCTTACACTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCT-GATCTTAGACTGG
* * ** * * *
5619672 GATTGAACACCGTATGCCTAAGCCAACCGACGAAGTGAGCGGGAGGGCGGGCGGGCGGGTACTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
* ** ** * * ** *
5619737 GTCGGCCAGAGAGACAAGACACACAAGCCATAAATCGATAGGGTGTTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* *
5619802 CTTCATATTTTTGCATGGCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* **
5619867 CTTCACGTGAAGTTTCCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTT
260 CTTCACGTGAAGTTT-CATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTT
* * *
5619932 ACCGTTCGGGATTTTTTAAAATTTTTTCGGAA-GAATTTCTGGCCCCAAACTTGGTAGACTTGAT
324 ACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGAT
* *
5619996 CCTTGTATTTTTTTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGT
388 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
*
5620061 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGTAGCAAACCTGTAAAA
453 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
5620126 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAA
518 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * *
5620191 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCTGGCCCCCCGGCCCCTCGAT
583 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-G---ATCG-T
* * * * *
5620256 CACCGGAACCCCAATGCCG-CCGGTCAGGTTCTCCGACGATGGTCTGGCGATGGTGACCTGGTGA
643 ---CGGAACCCCAATGCCGTCC-GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGA
* * * * *
5620320 AGAAAAATGCGGTACCAGCACATGCCTGAGCCCAGTATGTGCTGCCGTAACACTCGGT--GGTCC
704 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTC
5620383 GATCTTAGACTGGGAATGAA---C-T-T-C---G--T----ATG-----C----G--TAAGTCAA
769 GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA
* * * * * *
5620422 CCCACAAAACGAGCGTGCGAGCGCTCAGCCGGCTAGAAGAGCGGGATGCGCAAGCCGAGGATCGA
834 CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
*
5620487 CCGA
899 CCGG
* * * ** * **
5620491 GTCCCCCTCTACATGCTGCCAATCCTGCTACTACAACCCTCGGTCCGGTCCAATCTTAGACTGGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
*
5620556 AATGAACTCCGTATGCCTAAGCTAACCGACGAAACGAGC-GGACGGGCGGGCGGGCGGGCACTAC
66 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG-CGGGCGGGCGGGCGGGCACTAC
* * *
5620620 GTCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
5620685 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
5620750 CTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCCTGATTTTCAAAACTTTTTG
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* * * *
5620815 CGGTTTGAGATTTTTTTAAATTTTTTCGGAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * * *
5620880 TTGCATTTTTTTTTGCATGCACAAAAAAATTCAGCTAAAAACGCGAAGTGTACAAGATTTTGTGA
390 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* *
5620945 CCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGGAAACCTGTAAAATC
455 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * *
5621010 TCAAATGCTCTTTAAGGGGGTTTGAGTTCTCGAGGTTTGATAAGGGACA-GGGGCCAATATAAGG
520 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * *
5621074 ACCAAGTACCAGCACCCATCGCACATCATGTGCGTACACCCCCC-GCCCCCCGGCCCCTCGATCA
585 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-G---ATCG-T--
* * * * *
5621138 CCGGAACCCCAATGCC-ACCGGTCAGGTTCTCCGACGATGGTCTGGCGATGGTGACCCGGTGAAG
643 -CGGAACCCCAATGCCGTCC-GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAG
* * *
5621202 AAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTGCCGCAACACTCGGT--GGTTCGA
706 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGA
5621265 TCTTAGACTGGGAATGAA---C-T-T-C---G--T----ATG-----C--A----TAAGTCAACC
771 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * *
5621304 CACGAAACGAGCGTACGAGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGACC
836 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC
*
5621369 GA
901 GG
* * * * * **
5621371 GTCCCCCTCTACGTGCTGCCAATCCTACTACCGCAACCCTCGGTCTGGTCCAATCTTAG-CTGGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
* * * *
5621435 AATGAACTCCATATGCCTAAGCTAACCGACGAAACAAG-TGGACGGGCGGGCGGGCGGGCACTAC
66 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGG-CGGGCGGGCGGGCGGGCACTAC
* * * *
5621499 GTCGACCAGAGAGACGGTATGCGCAAGCCGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
5621564 CTTCATATTTCTCCATGCCAATGCCATTTTTATGGCTTCTAAATTTATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
5621629 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACT-ATTTTCAAAACTTTTT
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA-TGATTTTCAAAACTTTTT
* *
5621693 ACGGTTCAGGATTTTTTAAAATTTTTTC-GAAGAGAGTTTTGGCCGCAAACTTGGTAGACGTGAT
324 ACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG-GAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
5621757 CCTTCTA-TTTTATTGGCATGCAC-AAAAAATTCAGCTAAAAA-TC-AAATGTACAAGATTTTGT
388 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
*
5621818 GACCATTTG-AAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
453 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
5621882 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
518 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * * *
5621947 GGGCCAAGTACCAGTACCCATCGTACATCATTTGCGCACACCCCCCCTGGCCCCCCCGATCGTCA
583 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GG-CCCCCCGATCGTCG
* * * *
5622012 GAACCCCAACGCCG-CCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGATGAAGAAA
645 GAACCCCAATGCCGTCC-GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAA
**
5622076 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC--ACACCCTCGGTTTGGTTCGATC
709 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTA-ACCCTCGGTCCGGTTCGATC
* * * *
5622139 TTAGATTGGGAATGAACTTCATATGCTTAGACTGGGAATGCACTCCGTATGCCTAAGTCAACCCA
773 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * *
5622204 TGAAACGAGCATACGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGTCGGGGAACGACCGG
838 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
** * * * * *
5622269 GTCCCCCTCTATGTGCTGCTGATCCTAG-TGCCACAACCCTCGATCCAGTATGATCTTAGACTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCT-GCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGG
* * * * * *
5622333 GAATGATCTTCGTATGCCTAAGCCAACCGATGAAGCGAGCAGGCGGGCAGGCGGGCGAGCACTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
* * *
5622398 GCCGACCAGAGAGACGGGATGCGCAAGTCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
5622463 CTTCATATTTCTACGTGCCAATTCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * * * ** *
5622528 CTTCACGTGAAGTTTCATAGCAAGACAACTCGTTTTTTATTTCTCATGATTTTTGAAACTTTTTG
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* ** **
5622593 CAGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTCAAG-CCCAAACTTGGTAGACGTGATC
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTT-TGGCCCCAAACTTGGTAGACGTGATC
* *
5622657 CTTGTATTTTTGTTGGCATGTACAAAAAAATTCAGC-AAAAGACTGGAAGTGTACAAGATTTTGT
389 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAA-ACTCGAAGTGTACAAGATTTTGT
* * * * *
5622721 GACCATTTGAAACAACTATCCCCATTTCAGCCACTTTAATGGCTACTGGCAGTAAACCTGTAAAA
453 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
5622786 TCTCAAATGCTCTTTACGGGGG-GCTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATA
518 TCTCAAATGCTCTTTAAGGGGGTG-TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * * *
5622850 AGGGCCAAGTACCAGCACCCATCACAAATCATGTGCACACACCCCCCGGCCCCACGATCGCCTGA
582 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGA
* * *
5622915 ACCCCAATGCCGTCCATCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAAT
647 ACCCCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAAT
*
5622980 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCTGGTTCGATCTTAG
712 GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAG
* * * *
5623045 ATTGGGAATGAACTTCATATGCTTAGACTGGGAATGCACTCCGTATGCCTAAGTCAACCCACGAA
777 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
* * * * *
5623110 ACGAGCATACGGGCGCTCAGCCGGCCAGAGAGGCGGGATGCGCAAGTCGGGGAACGACCGG
842 ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
** * * * * *
5623171 GTCCCCCTCTATGTGCTGCTGATCCTAG-TGCCACAACCCTCGATCCAGTATGATCTTAGACTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCT-GCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGG
* * * * * *
5623235 GAATGATCTTCGTATGCCTAAGCCAACCGATGAAGCGAGCAGGCGGGCAGGCGGGCGAGCACTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
*
5623300 GCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
*
5623365 CTTCATATTTCTGCATGCCAATGCCATTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
5623430 CTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTCAAAACTATTTG
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* *
5623495 CTGTTCGGGATTTTTTAAAATATTTTT-GAAAGGAGTTTT-GCCCCAAACTTGGTAGACGTGATC
325 CGGTTCGGGATTTTTTAAAAT-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* *
5623558 CTTGTATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTATC
389 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
5623622 ACCATTTGAGAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAAT
454 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * * * *
5623687 CTCAAATGCTCTTTGAGGGGGTGTGAGTTCTTGAGGTTTGATGGGGGAAAAGGGGCCAATATAAG
519 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* ** *
5623752 GTCCAAGTACCAGCACCCATCTTACATCATGTGCGCACACCCCTCCAGGCCCCCCCGATCATCGG
584 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CC-GG-CCCCCCGATCGTCGG
* *
5623817 AACCCCAATGCC-ACCGGTCAGGTTCTCCAACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAA
646 AACCCCAATGCCGTCC-GTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAA
* * * ** *
5623881 ATACGG-TCCAGCACATGCCCGATCCCAGCATGTGCTGCCACAACCCTTGGTCCGG-TCTGATCT
710 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTC-GATCT
* * **
5623944 TAGACTGGGAATGAACTCCCTATGCTTAGACTGGGAATAAACTTTGTATGCCTAAGTCAACCCAC
774 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * * * * * * * * *
5624009 GAAACGAGTGTACCGGCGCTCAGCCAGCCAGAGGGGCTGGATGTGAAAGCTGAGGATCGACCGA
839 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
* *
5624073 GTCCCCCTCTGTGTGCTGTCGATCCTGCTACCGCAACCCTTC-ATCCGGTCTGATCTTAGACTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCC-TCGATCCGGTCTGATCTTAGACTGG
* *
5624137 GAATGAACTCCGTAAGCCTAAGCCAACCGACGAAAC--G-A-GCGGAC--G-GGGCGGGCACTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
** * * * *
5624195 GCCAACTAGAGAAATGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
5624260 CTTCATATTTCTGCGTGCCAATGACATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
** *
5624325 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTG
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* * * **
5624390 TGGTTCGGGATTTTTTAAAATTTTTTAGGAAGGATTTTTGGCCCCAAACTTGGTAGGTGTGATCC
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* *
5624455 TTGTATTTTTTTTGGCATGCA-AAAAAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
390 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * * *
5624519 CCATGTGAAAAAAGTGTCCCCATTTCATACACTTTAATGGCTACTCGTAGCAATCCTGTAAAATC
455 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* *
5624584 TCAAATGCTCTTTAAGGGGGTGAGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
520 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* *
5624649 GCCAAGTACCAGCACCCATCGCACATCATGTGCACACATCCCCCCGGCCCTCCGATCGTCGGAAC
585 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGGAAC
* * ***
5624714 CCCAATGCCGTCGGTCAGCTTCTCCGACGATGCTCC-AGCGATGGTGCCCCGACAAAGAAAAATG
649 CCCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGA-CGATGGTGCCCCGGTGAAGAAAAATG
** * * * * * *
5624778 CGGCTTCAGCACATGCCTGAGCCCAGCATGTGCTACCGTAACCCTCGGTTCGATCCAATCTTAGA
713 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAGA
* * * *
5624843 CTGTGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCGAAGTCAACCTACGAAA
778 CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
* * * * * * * *
5624908 TGAACGTGCGGGCGCTAAGCCGGCCAGAGGGGCGGGCTGCGTAAGTCGGGGATCGATCGC
843 CGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
* * * **
5624968 GTCCCCCTCTGCATGCTACCGATCCTGCTACTGCAACCCTC-AGTCCGGTCCCATCTTAGACTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGG
** *
5625032 GAATGAACTCCGTATGCCTAAGATAAACTGACGAAACGAGCGGACGGGCGGGCAGGATGCGCAAG
65 GAATGAACTCCGTATGCCTAAG-CCAACCGACGAAACGAGC--A--GGCGGGC-GG--GCG---G
* * ** ****** * * * * * ** * *
5625097 TCGGGGA-TTGGCCGGGTCCCCCTCTACGTGCTGC-CGATCCTGCTGCCGTAACCCT-TGGT-CT
119 GCGGGCACTACGCC-GG-CCAGAGAGACGGGATGCGCAAGCC-G-TG--G-ATCGATAGGGTGGT
* * * * * * * ** * * * ** **
5625158 AGTTTGATCTTAGACTGGGAATGATCTCCGTATGCCT--AAGCCAACCGACAAAATGAATGGGCG
177 AGGTGGGT-TT--A---GGCA-CATCTTCATATTTCTGCATGCCAA-TG-CCATTTTTAT-GGC-
** ****** ** * * * * *** * * *
5625221 GGCGGGCGGGCAGGCACTGCGTCGACTAGAGAGACGGGATGCGCAAG--CCATGGATCGATAGGG
231 -TTGTAAATTCATACAATG-GTC-CCT-TA-AGCCTTCACGTG-AAGTTTCATGG--C-A-A--G
** * * * * * * * *
5625284 TGGTAGGTGGGTTTAGGC-ACATCTTCAT-ATTTCTGCATGCCAATGCCATTTTTATGGCTT-GT
284 ACG-A-CT-CGTTT--TCTA-TTTTTCATGATTT-T-CA----AA--AC-TTTTTACGG-TTCGG
* * ** * ** * *** ** ** *** * * * * *
5625346 AAATTCATACAA-TGGTCCCTTA--AGCCTTCACGTGAAGTTTCATGGCAAGAC--GACTCGTTT
333 GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA---ACTTGG-TAGACGTGA-TCCTTG
* * ** **** **** * * **** ** * * *
5625406 TCTATTT-TTCACGATTTTTGAAACTTTTTACGGTTTGAGATTTTTTTAAATTTTTTCGAAAGGA
393 TATTTTTGTTGGC-A-TGCACAAAAAAATT-CAG-CT-A-A-AAACTCGAA-GTGTAC--AA-GA
* * * * * ** ** * **
5625470 GTTTTGGGCCCAAACTTAGTAAACA-TGAT---C-TTT--GTA-TTTTTTTTGGCAAGC-GAAAA
447 -TTTTGTGACC--A-TTTGAAAAAAGTG-TCCCCATTTCAG-ACACTTTAATGGCTA-CTG-GCA
** * * * ****
5625526 AAAAATTCAGCTAAAAACTCGAAGTGCACAAGATGTTTTGACCATTTGAAAAAAGTGTCCCGA-T
504 GCAAA-CCTG-T-AAAA-TC----T---CAA-ATG--CT---C-TTT-AAGGGGGTGT---GAGT
** * * **** * **
5625590 T-TCAGACACTTTAATGGCTACTGGCA-A-CAAACCTATAAAATCTAAAACGCTCTTTAAGGGGG
547 TCTC-GA-GGTTTGAT-G--A--GGGATAGGGGGCC-----AATAT-AAGGGC-C---AA-----
***** * * * * * * **
5625652 TGTGAGTTCTCGAGGTTTAATGAGGCATAGGGGGCCAATATAAGGGCCAAGTACCAACACCC-AT
590 -GT-A---C-C-AGCACCCAT--CGCACA-----TC-ATGT--GCG-C-A-CACC--C-CCCGGC
* * *** ** * *
5625716 CCCAC-ATCATGT-GTGCACCCCCCGGCCCCCCCGATC--G-TCAGAACC-CCGATGCCACCGGT
632 CCCCCGATC--GTCG-GAACCCCAATG-CCGTCCG-TCAGGTTC---TCCGAC---G--A----T
** *
5625775 CAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGC
680 ---G-----C--T------CCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGC
* * * *
5625840 CCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTAGACTGTGAATGAACTCCA
729 CCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCG
* * * *
5625905 TATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACAAACGTGAGGGCGCT
794 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * *
5625970 CAGCCGGCCAGAGGGGCAGGCTGCGTAAGCCGGGGATC-AGTCGG
859 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGG
* * * * *
5626014 GT--CCTTCTGCGTGCTGCCGATCTTGCTGCCGCAACCCTC-AGTTCAGTCTGATCTTAG-CTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGG
** * * * *
5626075 GAATGAAGGCTGTATGCCTAAGCCAACCGACGAAAC--G-A-GCGAGCGGGCGAGCGGGCATTAC
65 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
* * *
5626136 GCCGGCCAGAGACACGGGATGCGCAAGCTGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACAT
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
***
5626201 CTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
5626266 CTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCAAAACTATTTG
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
** * * *
5626331 CTATTCGGGATTTTTTAAAACATTTTT-GAAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATC
325 CGGTTCGGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * *
5626395 CTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAAGTCGAAGTCTACAAGATTTTGTG
389 CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* *
5626460 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAGTGGCAACAAACCTGTAAAAT
454 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
* * *
5626525 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGACAGGTGGCCAATATAAG
519 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
* * *
5626590 GGCCAAGCACCAGCACCCATCGCACATCGTGTGCGCACACCCCCCGGTCCCCCCGATCATCGGAA
584 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGATCGTCGGAA
* * * *
5626655 CCCCAATGCCG-CTGGTCAGCTTCTCTGACGATGCTCCGATGATGGTGCCCCAGG-GAAGAAAAA
648 CCCCAATGCCGTC-CGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCC-GGTGAAGAAAAA
* *
5626718 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGATCTTA
711 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTA
* * * *
5626783 GACTGGGAGTGAACTCCCTATGCTTAGACGGGGAATGAACTCCGTATGCCTAAGTCAACCCACAA
776 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* ** * * * * ** *
5626848 AATGAGCGTGCGACCGCTCAGCCGGCCAGAGGGGCAGGATGCGAAAGTCGAGGATCGGTCGT
841 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
* * * * * * * * **
5626910 GTCCCCCTCTACGTGCTACCGATCCTGTTGCTGTAACCCTCGGTCCGATCCCATCTTAGACTGGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
* ** * * *
5626975 AATGAACTCTGTATGCCTAAGATAAACCGATGAAAC-A--A-GCGGGCAGACGGGCGGGCACTAC
66 AATGAACTCCGTATGCCTAAG-CCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTAC
* * *
5627036 GCCGGCCAGAGAGACGGGATGCGCAAGCCTTGGATTC-ATAGGGTGGTAGGTGGGTTTACGCATA
130 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA-TCGATAGGGTGGTAGGTGGGTTTAGGCACA
* * **
5627100 TCTTCATATTTCT--ATGCGCCATTGCCATTTTTATGGCATGTAAATTCATACTCTGGTCCCTTA
194 TCTTCATATTTCTGCAT--GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * *
5627163 AGCCTTCACATGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAAGATTTTCAAAAATTT
257 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTT
* *
5627228 TTACGGTTCGGGATTTTTTAAAATTTTTGCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
322 TTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * * * *
5627293 TTCTTGTATTTTTGTTTGCATGCACAAAAACATTTAGCTAAAAACTTGAAGTGTACAAGATTTTG
387 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* * * * *
5627358 TGACCATTTGAAAAAAGTGT-CCCAATTCAGACACTTTAATAGCTACTAGCAGCAAACCTGGACA
452 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
5627422 ATCTCAAATGCTCTTTAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATA
517 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * *
5627486 AGGGCCAAGTACCAGCACCCATCTCACATCATGTGCGCACACCCCTCGACCCCCCCGATCGTCGG
582 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCCCGATCGTCGG
** * * * * ** * **
5627551 AAAGCCAATGCCG-CTGGTCAAGTTCTCCGATGATGATCCGGTGATGGTGCCCTGACGAAGAAAA
646 AACCCCAATGCCGTC-CGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAA
* **
5627615 ATGCGGCACCAGCACATGCCCGAGACCAGCATGTGCTATCGTAACCCTCGGTCCGGTTCGATCTT
710 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTT
*
5627680 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACG
775 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * * * **
5627745 AAACGAGCGTGCGGGCTCTCAGTCGGCCAGAGGGGTGGGATGTGTAAGCCGCGGATCGGTCGG
840 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
** * * * * *
5627808 GTCCCCCTCTATGTGCTACCGATCCTGCTACCGTAACCCTTGATCCGGTCCGATCTTAGACTTGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
* * * * *
5627873 AATGAACTCCGTATGCCTAAGCCAATCGACGAAA--TG-A-GCGGGCGTGCGGGCAGGTACTACG
66 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTACG
* * * *** *
5627934 TCGGCCAGAGAGACAGGATGTGCAAGCCAACCGATCGATAGGGTGGTAGGAGGGTTTAGGCACAT
131 CCGGCCAGAGAGACGGGATGCGCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * *
5627999 CTTCATATTTCTACATGCCAATGCCATTTCTATGGCTTGTAAATTCATACAGTGGTCCCTTAAGC
195 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * **
5628064 CTTCATGTGAAGTTTCATGGCAAGACGGCTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTA
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
** * ** * * * *
5628129 CGGTTTAGGATTTTTAAAAATTTTTTTAGACA-GAATTTTCGCCCCAAACTTAGTAGACGTGATT
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATC
* * * * *
5628193 CTTGTTTTTTTTTTTGGGATGCACAAAAAAATTCAGCTAAAAAATTGAAGTGTACAAGATTTTGT
389 CTTG-TATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
5628258 GACCATTTGAAAAAAGTGTCCCCATTTCAGACAGTTTAATGGCTACTGGTAGCAAACCTGTAAAA
453 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * * *
5628323 TATCAAATGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATTAGGGATAGGGGGCCAACATAA
518 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * * ** *
5628388 GGGCTAAGCACCAGCACCCATCGCACATCATTTGCG--CACCCCCCAACCCCCCGATCGCCGGAA
583 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAA
* * **
5628451 CCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGACCCGACGAAGAAAAATG
648 CCCCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATG
* * * * * * * *
5628516 CGACACCAGCAAATGCTCGAGCCCTGCATGTGCT-CTGCAACCCTCGGT-CAGATCTGATCTTAG
713 CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTC-GATCTTAG
* * *
5628579 ACTGGGAATCAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCTTAAGTCAAAGTCAACC
777 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC------CTAAGTCAACC
* * * * * * *
5628644 CACGAAACGAGCGTGCAGGCACTCAACCGACCAGAGGGGCGAGATGCACAAGCTGGGGATCGACC
836 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC
5628709 GG
901 GG
* * * * * * * *
5628711 GTCCCCCTCTGCATGCTGTCGATCTTGCTACTGCAACCCTCGATCTGATCCGATCTTAGATTGGG
1 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
* * * * *
5628776 AATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCGGGCGGGCGGACGGGCGGGCACCATG
66 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTACG
** * * *
5628841 CCGGGTAGAGAGACGGGATGCGCAAGCCGTTGATCGGTAGGATGGTAGGTGGGTTTAGGCACATC
131 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
*
5628906 TTCATATTTCTGCATGCCAATGCCATTTTTTATGGCTTGTAAATCCATACAATGGTCCCTTAAGC
196 TTCATATTTCTGCATGCCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* ** **
5628971 CTTCACGGGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAAACTTTTTA
260 CTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTA
* *
5629036 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGACCCAAACTTGGTAGACGTGATCC
325 CGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC
* * *
5629101 TTGTATTTTTGTTAGCATGTACAAAAAAATTCAGGTAAAAACTCGAAGTGTACAAGATTTTGTGA
390 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
5629166 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
455 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* * * * *
5629231 TCAAACGCTCTTTAAGGGGGTGTGACTTCTCGATGTTTGCTGAGGGATAGGGGGCCAATATCAGG
520 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * *
5629296 GCCAAGTACCACCACCCACCGCACATCATGTGCTCACACCCCCCGGCCCCCCGATCGCCGGAACC
585 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACC
* * * * * * * *
5629361 TCAATACCGTCAGTCAAGTTCTCCG-GGATGCTCCAACGATGGTGCCCCAGCGAAGAAAAATGCG
650 CCAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCG
* * * ** *
5629425 ACACCAGCACATGCCCGAGCCCATCATGTGCTGCCGTAACACTCGGTTTGGTTCGATCTTAGATT
715 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAGACT
* * *
5629490 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCATGAAATG
780 GGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACG
* * * * *
5629555 AGCGTGCAGGCACTCAGACGACCAGAGGGGCGGAATGCGCAAGCCGGGGATCGA
845 AGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA
5629609 TAGGGTGGTA
Statistics
Matches: 9917, Mismatches: 1402, Indels: 864
0.81 0.12 0.07
Matches are distributed among these distances:
861 1 0.00
862 53 0.01
863 174 0.02
864 3 0.00
865 3 0.00
866 5 0.00
867 180 0.02
868 6 0.00
869 69 0.01
870 159 0.02
871 188 0.02
872 54 0.01
873 1 0.00
874 103 0.01
875 78 0.01
876 8 0.00
877 20 0.00
878 22 0.00
879 313 0.03
880 296 0.03
881 60 0.01
882 330 0.03
883 246 0.02
886 4 0.00
887 85 0.01
888 92 0.01
889 2 0.00
891 155 0.02
892 110 0.01
893 173 0.02
894 405 0.04
895 662 0.07
896 455 0.05
897 129 0.01
898 865 0.09
899 455 0.05
900 622 0.06
901 256 0.03
902 904 0.09
903 314 0.03
904 151 0.02
905 2 0.00
906 258 0.03
907 256 0.03
908 135 0.01
909 20 0.00
910 60 0.01
912 5 0.00
913 9 0.00
914 8 0.00
915 2 0.00
916 7 0.00
917 6 0.00
918 4 0.00
919 1 0.00
920 4 0.00
921 12 0.00
922 13 0.00
923 21 0.00
924 9 0.00
925 1 0.00
926 7 0.00
927 5 0.00
928 2 0.00
929 8 0.00
930 7 0.00
931 4 0.00
932 1 0.00
933 1 0.00
935 6 0.00
936 1 0.00
937 5 0.00
938 5 0.00
939 6 0.00
940 8 0.00
942 1 0.00
943 1 0.00
945 8 0.00
947 9 0.00
948 30 0.00
949 7 0.00
950 5 0.00
951 1 0.00
952 2 0.00
953 5 0.00
954 5 0.00
955 3 0.00
956 3 0.00
957 11 0.00
958 8 0.00
959 10 0.00
960 10 0.00
961 5 0.00
962 12 0.00
963 10 0.00
964 2 0.00
965 6 0.00
966 4 0.00
967 1 0.00
969 3 0.00
970 4 0.00
972 4 0.00
973 3 0.00
975 1 0.00
976 4 0.00
977 5 0.00
978 1 0.00
979 12 0.00
980 12 0.00
981 5 0.00
982 10 0.00
983 10 0.00
984 9 0.00
985 13 0.00
986 3 0.00
987 3 0.00
988 5 0.00
989 5 0.00
990 2 0.00
991 2 0.00
992 11 0.00
993 28 0.00
994 7 0.00
995 2 0.00
996 9 0.00
999 2 0.00
1000 3 0.00
1001 8 0.00
1002 5 0.00
1003 5 0.00
1004 2 0.00
1005 5 0.00
1006 2 0.00
1007 4 0.00
1008 1 0.00
1009 1 0.00
1010 4 0.00
1011 6 0.00
1012 7 0.00
1013 5 0.00
1014 3 0.00
1015 8 0.00
1016 1 0.00
1017 6 0.00
1018 19 0.00
1019 11 0.00
1020 17 0.00
1021 5 0.00
1022 5 0.00
1023 3 0.00
1024 358 0.04
1025 329 0.03
1026 312 0.03
1027 325 0.03
1028 280 0.03
1029 224 0.02
1030 272 0.03
1031 337 0.03
1032 282 0.03
1033 298 0.03
1034 216 0.02
1035 238 0.02
1036 841 0.08
1037 204 0.02
1038 209 0.02
1039 260 0.03
1040 215 0.02
1041 181 0.02
1042 200 0.02
1043 227 0.02
1044 222 0.02
1045 363 0.04
1046 537 0.05
1047 241 0.02
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (902 bp):
GTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGATCCGGTCTGATCTTAGACTGGG
AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCACTACG
CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTAC
GGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCC
CAATGCCGTCCGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGG
CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAACCCTCGGTCCGGTTCGATCTTAGACTG
GGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGA
GCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGG
Found at i:5624876 original size:26 final size:26
Alignment explanation
Indices: 5624837--5624889 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5624827 TCGATCCAAT
* *
5624837 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5624863 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5624889 C
1 C
5624890 CGAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5625922 original size:26 final size:26
Alignment explanation
Indices: 5625883--5625935 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5625873 CCGGTCCGAT
*
5625883 CTTAGACTGTGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5625909 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5625935 C
1 C
5625936 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.30, C:0.21, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5626816 original size:26 final size:26
Alignment explanation
Indices: 5626779--5626831 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5626769 CCGGTCCGAT
* *
5626779 CTTAGACTGGGAGTGAACTCCCTATG
1 CTTAGACGGGGAATGAACTCCCTATG
*
5626805 CTTAGACGGGGAATGAACTCCGTATG
1 CTTAGACGGGGAATGAACTCCCTATG
5626831 C
1 C
5626832 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.28, T:0.25
Consensus pattern (26 bp):
CTTAGACGGGGAATGAACTCCCTATG
Found at i:5627706 original size:26 final size:26
Alignment explanation
Indices: 5627677--5627729 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
5627667 CCGGTTCGAT
5627677 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5627703 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5627729 C
1 C
5627730 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5628610 original size:26 final size:26
Alignment explanation
Indices: 5628574--5628629 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
5628564 CAGATCTGAT
5628574 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
* *
5628600 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
5628626 CTTA
1 CTTA
5628630 AGTCAAAGTC
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.27, C:0.20, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:5629518 original size:26 final size:26
Alignment explanation
Indices: 5629482--5629537 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
5629472 TTGGTTCGAT
*
5629482 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5629508 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5629534 CTTA
1 CTTA
5629538 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5630563 original size:715 final size:715
Alignment explanation
Indices: 5628757--5631619 Score: 2954
Period size: 715 Copynumber: 3.9 Consensus size: 715
5628747 CCCTCGATCT
* * *
5628757 GATCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAA-GCCAATCGACGAAACG-AGCGGGCG
1 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAATGCCAAT-GACAAAACGTAGCAGGCG
* ** ** * *
5628820 GGCGGA-CGGGCGGGCAC-CATGCCGGGTAGAGAGACGGGATGCGCAAGCCGTTGATCGGTAGGA
65 GGCGGAGCGGGCAGGCACTCA-GCCGGCCAGAGAGACGGGATGCGCAAGCCGGGGATCGATAGGG
* *
5628883 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTTATGGCTTGTAA
129 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCA-TTTTTATGGCTTCTAA
* *
5628948 ATCCATACAATGGTCCCTTAAGCCTTCACGGGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
193 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
** * * *
5629013 TTCACAATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGA
258 TTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGC
* * *
5629078 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGTACAAAAAAATTCAGGTAAAAAC
323 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
5629143 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
388 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* * * *
5629208 ACTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTGACTTCTCGATGTTTGCTG
453 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
* *
5629273 AGGGATAGGGGGCCAATATCAGGGCCAAGTACCACCACCCACCGCACATCATGTGCTCACA-CCC
518 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCACCGCACATCATGTGCGCACACCCC
* * ** * * *
5629337 CCCGG-CCCCCCGATCGCCGGAACCTCAATACCGTCAGTCAAGTTCTCCG-GGATGCTCCAACGA
583 CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAGTTCT-CGATGATGCTCCGACGA
* * ** * * ** * *
5629400 TGGTGCCCCAGCGAAGA-AAAATGCGACACCAGC-ACATGCCCGAGCCCATCATGTGCTGCCGTA
647 TGGTG-CCCAGCGGAGATAGACCGGGACCCCCTCGACATGCCCGATCCTA-C-TGT-CTG-C--A
* **
5629463 ACACTCGGTTT
705 ACACTCAGTCC
* * * * ** ***
5629474 GGTTCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGA-ACTCCGTATGCTTA
1 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA-A-TGCCAATGACAAAACGTA-GC---
* *** * * * * * *
5629538 AGTCAACCCATGAAATGAGCGTGCAGGCACTCAGACGACCAGAGGGGCGGAATGCGCAAGCCGGG
60 AGGC-GGGC--G----GAGCGGGCAGGCACTCAGCCGGCCAGAGAGACGGGATGCGCAAGCCGGG
* *
5629603 GATCGATAGGGTGGTAGGTGGGTTTAGGAATATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
118 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
* * * * *
5629668 TGGGTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCGTGGCAAGACCACTCG
183 TGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * *
5629733 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTAGAGATTTTTTTAAATTTTTTCAGAAG
248 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAG
* * * ** * *
5629798 GAGTTCTGACCCCAAACTCAGTAGAGGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
313 GATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
5629863 AGCTAAAACCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
378 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
5629928 TTTAATGGCTATTGGCTGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGATCTCG
443 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
5629993 AGGTTTGATGAGGGTTAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACATCATGTG
508 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCACCGCACATCATGTG
** ** * * *
5630058 CGCACA-CCCCTAGG-GGCCCCGATCGCCGAAACCCCAATGCCACCGGTCAGGTTCTTCGACGAT
573 CGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAGTTC-TCGATGAT
* * * * * *
5630121 GCTCCGACGATGGTGCGCAAGTCGGGGATCGGCCGGGTCCCCCTCGACGTGCTGCCGATCCTACT
637 GCTCCGACGATGGTGC-CCAG-CGGAGATAGACCGGGACCCCCTCGACATGC--CCGATCCTACT
*
5630186 GTC-GCAACCCTCAAG-CC
698 GTCTGCAACACTC-AGTCC
* ** *
5630203 GGTCCGATCTTAGACTGGGAATGAACTTTGTATGCCTAA-GCCAACTGACAAAACG-AGCGGGCG
1 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAATGCCAA-TGACAAAACGTAGCAGGCG
* * **
5630266 GGCGGA-CGGGCAGGCA-TTACGCCGGCTAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGG
65 GGCGGAGCGGGCAGGCACTCA-GCCGGCCAGAGAGACGGGATGCGCAAGCCGGGGATCGATAGGG
* *
5630329 TGGTAGGTGGGTTTAGGCACATCTTCCTATTTCTGCCTGCCAATGCCATTTTTATGGCTTCTAAA
129 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAA
** *
5630394 TTCATACAATGGTCTTTTAAGCCTTCACGTGAAGTTTCATGCCAAGACGACTCGTTTTCTATTTT
194 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
** * * *
5630459 TCATGATTTTCAAAACTTTTTGCGGTTTGGGATTTTTTTAAATTTTTTCAAAAGGATTTTTGGCC
259 TCATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCC
* *
5630524 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGGTAAAAAGT
324 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * *
5630589 CAAAGTGTACAAGATTTGGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACGCTTTAATGGCTA
389 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * * *
5630654 CTGACAGCAAACCTGTGAAATCTCAAATGCTTTTTGAGGGGGTGTGAGTTCTCGAGGTTTGATGA
454 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
*
5630719 GGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCACCGCACATCATGTGCGCACAGCCCC
519 GGGATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCACCGCACATCATGTGCGCACACCCCC
* * * * * *
5630784 CCGGTCCCCCCGATCGTCGTAACCCAAATGCCGCCGGTCAAGTTCTCCAGTGATGCTCCGACGAT
584 CCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAGTTCTCGA-TGATGCTCCGACGAT
* * * * * * * * * *
5630849 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACTTGCCCGA-GCCCAGCAT-GTACTGTC-GCA
648 GGTGCCCAG-CGGAGATAGA-CCGGGACC--CCCTCG-AC-ATGCCC-G-ATCCTACTGTCTGCA
*
5630911 ACACTCGGTCC
705 ACACTCAGTCC
* ** * ** ** *
5630922 GATCCGATCTTAGACTAGGAATGAACTCTATACGTTTAGAATGGGAATGAACTCCCTATGGTTAA
1 GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCT--AATGCCAATG-A----C-A----AAA
* ** **** * * * * *
5630987 -GTCAACAAACGAAATGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGTGCAAGCCGGG
54 CGT-AGCAGGCGGGCGGAGCGGGCAGGCACTCAGCCGGCCAGAGAGACGGGATGCGCAAGCCGGG
* * ** *
5631051 GATCGGTCGGGTCCCCCTCTATGTGCTGTCGATCCTACTACCGTAAGCCTCAGTCCATCTAATCT
118 GATCGATAGGGT-----GGTA-G-G-TG--G---GT--T----T-AG-----G--CA-C--ATCT
*
5631116 TCATATTTCTACGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCT
153 TCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCT
*
5631181 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTG
218 TCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCG
* ** *
5631246 GTTCGGGATTTTTTAAAATTTTTT-AGGAAGGATTTTTTGCCCCAAACTTGGTAGGTGTGAT-GT
283 GTTCGGGATTTTTTAAAATTTTTTCA-GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
*
5631309 TGTATTTTT-TTCGGCATGCACAAAAAAACAATTCAGCTAAAAACTCGAAATGTACAAGATTTTG
347 TGTATTTTTGTT-GGCATGCAC--AAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* ** * *
5631373 TGACCATTTG-AAAAAGTGTCCCCATTTCATACACTTTAATGGCTACACGTAGCAATCCTGTAAA
408 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
5631437 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATA
473 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * * *
5631502 AGGGCCAAGTACCAGCACCCATCGCACATCATATGGGCACACCCCCCCGGCACCCCCTATCGCCG
538 AGGGCCAAGTACCACCACCCACCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCG
* *
5631567 GAACCCCAATG-CAGCCGGTCAGGTTCTCTGGTGATGCTCCGACGATGGTGCCC
603 GAACCCCAATGCCA-CCGGTCAAGTTCTC-GATGATGCTCCGACGATGGTGCCC
5631620 CGGCAAAGAA
Statistics
Matches: 1780, Mismatches: 272, Indels: 141
0.81 0.12 0.06
Matches are distributed among these distances:
714 2 0.00
715 455 0.26
716 17 0.01
717 92 0.05
718 6 0.00
719 55 0.03
720 12 0.01
721 4 0.00
722 5 0.00
723 4 0.00
724 1 0.00
726 7 0.00
727 5 0.00
728 4 0.00
729 39 0.02
730 410 0.23
731 110 0.06
732 13 0.01
733 51 0.03
734 10 0.01
735 1 0.00
736 7 0.00
738 2 0.00
739 1 0.00
740 1 0.00
741 2 0.00
743 1 0.00
746 1 0.00
748 1 0.00
752 1 0.00
753 2 0.00
758 1 0.00
760 2 0.00
761 3 0.00
762 20 0.01
763 179 0.10
764 213 0.12
765 40 0.02
ACGTcount: A:0.25, C:0.23, G:0.24, T:0.27
Consensus pattern (715 bp):
GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAATGCCAATGACAAAACGTAGCAGGCGG
GCGGAGCGGGCAGGCACTCAGCCGGCCAGAGAGACGGGATGCGCAAGCCGGGGATCGATAGGGTG
GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAATT
CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
ATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCC
AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCACCACCCACCGCACATCATGTGCGCACACCCCCCC
GGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAGTTCTCGATGATGCTCCGACGATGGT
GCCCAGCGGAGATAGACCGGGACCCCCTCGACATGCCCGATCCTACTGTCTGCAACACTCAGTCC
Found at i:5634395 original size:26 final size:26
Alignment explanation
Indices: 5634359--5634411 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5634349 CTGGTCCGAT
*
5634359 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
5634385 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5634411 C
1 C
5634412 CTAAGTTAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5635296 original size:26 final size:26
Alignment explanation
Indices: 5635254--5635306 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5635244 CCAGTCTAAT
*
5635254 CTTAGACTGAGAGTGAACTACGTATG
1 CTTAGACTGAGAATGAACTACGTATG
* *
5635280 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTACGTATG
5635306 C
1 C
5635307 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTACGTATG
Found at i:5636330 original size:898 final size:899
Alignment explanation
Indices: 5631112--5645582 Score: 18247
Period size: 898 Copynumber: 16.3 Consensus size: 899
5631102 AGTCCATCTA
* *
5631112 ATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
5631177 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * * * **
5631242 TGTGGTTCGGGATTTTTTAAAATTTTTTAGGAAGGATTTTTTGCCCCAAACTTGGTAGGTGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* *
5631307 -GTTGTATTTTT-TTCGGCATGCACAAAAAAACAATTCAGCTAAAAACTCGAAATGTACAAGATT
196 CCTTGTATTTTTGTT-GGCATGCAC--AAAAA-AATTCAGCTAAAAACTCGAAGTGTACAAGATT
* ** * *
5631370 TTGTGACCATTTG-AAAAAGTGTCCCCATTTCATACACTTTAATGGCTACACGTAGCAATCCTGT
257 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
5631434 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAAT
322 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* * *
5631499 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATATGGGCACACCCCCCCGGCACCCCCTATCG
387 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGC-CCCCCGATCG
* * * * *
5631564 CCGGAACCCCAATGCAGCCGGTCAGGTTCTCTGGTGATGCTCCGACGATGGTGCCCCGGCAAAGA
451 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGA
* * *
5631629 AAAATGCGGCACCAGCACATG-CCGAGCCTAGAATGT-CTGCTGCAACCCTCGGTCCGGTCCGA-
516 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
5631691 --T---CT-----T--A----G-A----T--A--GGGAATGAACTCCGTATGCCTAAGTCAACCC
581 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * * * * ***
5631731 ACGAAACGAGCGGGCGGGCGCTCAGTCGACCAGAAGGGCGGGATGCGCAAGTCGAGGATCAACCG
646 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
* * * * * ** * *
5631796 GGTCCCTCTCTACGTGTTGCCGATTCTGCTACCGCAACCCTTCAATCTGGTC-GATCTTAGACTA
711 GGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCC-TCGGTCCGGTCTGATCTTAGACTG
* * * * ** * *
5631860 GGAATGATCTCCGCATGCCTAAGACAACCGACGAAATGAGCGGGCATGCGGGCGTGCACTACGTC
775 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCC
* *
5631925 GGCCAGAGAGACGGGATACG-AAGCCGTGGATCGATAGGGTGATAGGTGGGTTTAGGCAC
840 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
5631984 ATCCTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
5632049 GCCTTCACGTCAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * *
5632114 TGGGGTTCGAGATTTTTTAAAATTTTTTCGGAATGATTTTTGTCCCCAAACTTGGTAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * * *
5632179 CCTTTTATTTTTGTTGGCATGCACAAAAAATTTCATCTAAAAACGCGAAGTGTACACGATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
*
5632244 GACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
5632309 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGAGGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
** *
5632374 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCACCGAA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGA
* * *
5632439 ACCTCAATGCCGTCGGTCAGGTTCTCCT-GCGATGCTCCCG-CGATGGTGCCCCGGCGAAGAAAA
456 ACCCCAATGCCGCCGGTCAGGTTCT-CTGGCGATGCT-CCGACGATGGTGCCCCGACGAAGAAAA
* * * * ** * *
5632502 ATGCAGCACCAGCACATGCCCGAGCCCAGCGTGTGCTGCCGTAAACCTCTATCAGGTCCGATTTT
519 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTT
* * * *
5632567 AGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATTCCTAGGTCAACCGACG
584 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * **
5632632 AAATGAGCGTGCGGGCGCTCATCCGGCCAGAGGGGCGGAATGCGCAAGCCGGGGATCGACCGGGT
649 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* * * * * * **
5632697 CACCCTCTGCATGCTGCCGATCCTACTACAGCAACCCTTGGTCCGGTCCAATCTTAGACTGGGAA
714 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
5632762 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGAGCGGGCGGGCGGGCACTACGCC
779 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-G--G-GCGGGCGGGCGGGCACTACGCC
* * * * * *
5632827 GACCAAAGAAACAGGATGCGCAAGCCGTGGATCGATAGTGTGGTAGGCGGGTTTAGGCAC
840 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * * *
5632887 ATCTTCATATTTCTGCATGCCAAAGCCATTTTTATGGCATCTAAATTCATACAATGATCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
*
5632952 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * *
5633017 TACGGTTCGAGGTTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCTAAAC-T--TAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* **
5633079 CCTTGTATATTTT-TTGGCTTGCACAAAAAAATTCATTTAAAAACTCGAAGTGTACAAGATTTTG
196 CCTTGTAT-TTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
*
5633143 TGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
260 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* *
5633208 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGAGGCCAATATA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* ** * *
5633273 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACATCCCCCCGGCCCTTCGATCGCCGA
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGG
* * **
5633338 AACCTCAATACCGCCGGTCAGGTTCT-TCGGCGATGCTCTCG-CGATGGTGCCCCGGTGAAGAAA
455 AACCCCAATGCCGCCGGTCAGGTTCTCT-GGCGATGCTC-CGACGATGGTGCCCCGACGAAGAAA
** * * ** * *
5633401 AATGCATCACCAGCACATGCCCGAGTCCAGCATGTGTTGCCATAAACCTCTGTCCGGTCCGATCT
518 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCT
* * * * * *
5633466 TAGATTGGGAATGAACTCCATATGCTTAGACCGGGAATGAACTCTGTATG-CTAAGTTAACCGAC
583 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * *** *
5633530 GAAATGAGCGTACGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCAACGATCGATCGGG
648 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG
* ** * * * * *
5633595 TCGCCCTCTATGTGCTACCGATCCTACTGCCGCAACCCTTGGTCCGGTCCGATCTTAGACTAGGA
713 TCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
** * *
5633660 ATGAACTCCGTATGCCTAAGCCAATTGACAAAACGAGCGGGCGGGCAGGCGGGCACTACGCCGGC
778 ATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGC
* * *
5633725 CAGAAAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTGTAGGCAC
843 CAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * *
5633782 ATCTTCATATTTCTGCATGACAATGCCATTTTTATGGCTTCTACATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* **
5633847 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAAATTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
** * * * *
5633912 TGCGG-TCGAGGGTTTGTAAAATTTTTTTGAAAGGTGTTTTGGCCCCAAAC-T--TAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
** * * * *
5633973 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCATTTCAAAACTCGGAGTGCACAAAATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
5634038 GACCATTTGAAAAAAGTGTCCACATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
5634103 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGAGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * * *
5634168 GGGCCAAGTACCAGCACCCATCGCATATCATGTGCGCACATCCCCCCCGGCCCCCTGATCGCCGA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCGATCGTCGG
* * * * *
5634233 AACCTCAATACCGTCGATCAGGTTCT-TCGGCGATGCTCTC-CCGATGGTGCCCCGACGAAGAAA
455 AACCCCAATGCCGCCGGTCAGGTTCTCT-GGCGATGCTC-CGACGATGGTGCCCCGACGAAGAAA
* * * * ** * * *
5634296 AATGTGTCACCAGCACATGCCCGAGTCTAGCATGTGCTGCCATAAACCTCTGTCTGGTCCGATCT
518 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCT
* * * *
5634361 TAGATTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAACCGAC
583 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * * * * * * ** *
5634426 AAAATGAGCGTGCAGGTGCTCAGTCGGCCAAAGGGGCGGGATGCGTAAGCTAGCGATCGGTCGGG
648 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG
** * * * * * * * *
5634491 TTACCCTCTGTGTGCTACCGATCCGGCTACCGCAACCTTTTGGTCCGGTCCGATCTTAGACTAGG
713 TCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACC-CTCGGTCCGGTCTGATCTTAGACTGGG
* * * *
5634556 AATGAACTTCGTATGCCTAAGCCAACCGAC-AAA--A--TGACGGGCGGGCGGGCACTACGTCGG
777 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGG
* * * *
5634616 CCATAGAGACAGGATGCGCAAGCCGTGGATCGATAGAGTGGCAGGTGGGTTTAGGCAC
842 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
** * *
5634674 ATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAACTGATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
5634739 GCCTTCACATGAAGTTTCATGGCAAGAAGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
** * * *
5634804 TGCGGTTCTTGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACTTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * *
5634869 CCTTGTATTTTTTTTGGGACGCACAAAAAAATTCAGCT-AAAACTCGAAGTTTACAAGATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
5634933 GACCATTTGAAAAATGTTTCCCCATTTC-GAACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
5634997 ATCTCAAATGCTTTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
5635062 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAGCCCCCCCGGCACCCCCGATCGTC
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGC-CCCCCGATCGTC
* * *
5635127 GGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAA
453 GGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAA
* * * * **
5635192 AATGCGGCACCAGCACATGCCTGAGCCCAACATGTGCTG-CACAACCCTCGGTCCAGTCTAATCT
518 AATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCT
* * *
5635256 TAGACTGAGAGTGAACTACGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
583 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* * * * * * * * *
5635321 GAAATGAGCGTGCGGGCACTCTGCCGACTAGAGGGGTGGAATGCGTAAGCCGGGGATC-GACGGG
648 GAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGG
* * * *
5635385 TCCCCCTCTGTGTGCTACCGATCCTGCTGCCGTAACCCTCGGTCTGGT-TCGATCTTAGACTGGG
713 TCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGG
** * *
5635449 AATGAACTCCGTATGCCTAAGCCAGTCGACGAAACGAGCGGGCAGGCGGGCGGGCACTACGTCGG
777 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGG
* * * *
5635514 CTAGAGAGACGAGATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCAC
842 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
5635572 ATCTTCATATTTCTGCATGCCAATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * *
5635637 GCCTTCACGTGAAGTTTCAGGGCAAGACGACTCGTTTTTTATTTTTCGTGATTTTTGAAATTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
** * *
5635702 TGCAATTCGAGATTTTTT-AAATTTTTTTGGAAGGGGTTTTGGCCCCAAACTTGGTAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * * * *
5635766 CCTTGTATTTTAGTTGGTATGCATAAAAAAAAGTCAGCTAAAAACTCGAAGTGTACAACATTTTG
196 CCTTGTATTTTTGTTGGCATGCA-CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
*
5635831 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGTTACTGGCAGCAAACCTGTAAA
260 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
*
5635896 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATACA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
*
5635961 AGGGCCTAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCGG
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGG
* * *
5636025 AACCCCAATGCCGCCTGTCAGGTTCTCTGGCAATGCTCCGATGATGGTGCCCCGACGAAGAAAAA
455 AACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAA
* * * *
5636090 TGCGGCACCGGCACTTGCCCGAGGCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTA
520 TGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTA
* * * * *
5636155 GACTGGGAAAGAACTCCGTATGCTTAAAATGGAAATGAACTCCGCATGCCTAAGTCAACCCACGA
585 GACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * * * * * * *
5636220 AATGAGCGTGCGGGTGCTAAGTCGGCCAGAGGGGCGGGATGTGCAAGCCAGGGATCAGTTGGGTC
650 AACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTC
* * * * * * *
5636285 CCCCTTTGTGTGCTACCGATCCTACTACCGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAAT
715 CCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAAT
* * * *
5636350 GAACTCCGTATGCCTAAGCCAATCGACG-AATGA-CTGGGCGGACGGGCAGGCACTACGCC-GCC
780 GAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGGCGGGCGGGCGGGCACTACGCCGGCC
* *
5636412 AGAGAGACGGGATGCGCAACCCGTGGATCGATAGAGTGGTAGGTGGGTTTAGGCAC
844 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * *
5636468 ATCTTTATATTTTTACGTGCCAATGCCACTTTTT-TGGCTTGTAAATTCATACAATGGTCCCTTA
1 ATCTTCATATTTCTGCGTGCCAATGCCA-TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTA
* * *
5636532 AGCCTTTACGTGAAGTTTCAT-GCAAGACGACTCATTTTCTATTTTTCACGA-TTTTGAAACTTT
65 AGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTT
* * * * * *
5636595 TTTCGGTTC-AGGAGTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATGGTAAACATG
130 TTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
** * * *
5636659 ATTGTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT-AAAACTTGAAGTGTTGCAAGATTT
194 ATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTG-TACAAGATTT
* * **
5636723 TGTGATC-GTTG--AAAAGT-AACCCATTTCAGACACTTTAATGGCTACT-GCAGCAAACCTGTA
258 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
* *
5636783 AAATCTCAAATGCTCTTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGGGTA-GGGGCCAA
323 AAATCTCAAATGCTC-TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGGATAGGGGGCCAA
* *
5636847 TATAAGGGCCAAGTACCCGCACCCATCGCACATCATGTGCGCACA-CCCCCCGACCCCCCTGATC
386 TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC-GATC
* * * * **
5636911 GTCGAAACCCCCATGCCGTCGGTCAGGTTCTCCGATGATGCTCCGACGATGGTGCCCCGACGAAG
450 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAG
* * * *
5636976 -AAAA------A--A--AC--G-GC-A--CCAGCATGTGCTGCCGCAACCCTCAGTCCGGTTCAA
515 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA
* * *
5637024 TCTTAGACTGGGAATGAACTTCGTATGCTTTGACTGGTAATGAACTCCGTATGCCTAAGTCAACC
580 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* *
5637089 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGTCGGGGATCGGTC
645 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC
* * * ** * **
5637154 GGGTCCCCCTTTGCATGCTGCTGATCCTGCTGGAGCAACCCTAGGTCTC-GTCCAATCTTAGACT
710 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTC-CGGTCTGATCTTAGACT
* * * * *
5637218 GGGAATGAACTCCGTATGCCAAAG-GAAGCCGATGAAACGA----GCGGACGGGCAGGCACTACG
774 GGGAATGAACTCCGTATGCCTAAGCCAA-CCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACG
* * * *
5637278 TCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATGGGGTGGCAGGTGGGTTTAGGCAC
838 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * *
5637340 ATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCATGTAAATTCATACAATGCTCTCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
5637405 GCCTTCACGTTAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
** * * *
5637470 TATGGTTCGGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* ** * * * *
5637535 CCTTGTATTTTTTTTGGTGTGCACAAAAAATTTCATCTAAAAA-TGAGAAGTGTACACGATTTTG
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT-CGAAGTGTACAAGATTTTG
* * * *
5637599 TGACCATTTGAAAAAAGTGTCACCATTTCAGAAACTTTAATTGCTACTGTCAGCAAACCTGTAAA
260 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * *
5637664 ATCTCAAATGCTCCTTAA-GGGGTTTGAGTTCTCGTGGTTTGTTGAGGGATAGGGGGCCAATATA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
*
5637728 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCCCCGGCCCCCCGATCGCCG
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCCGGCCCCCCGATCGTCG
** ** *
5637793 GAACCCCAATGCCGTTGGTCAGGTTCTC---CG--G-T-----GATGGTGCCTTGATGAAGAAAA
454 GAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* *
5637847 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC--T---ATCCGGTC--
519 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTT
* *
5637905 ---C----AAT---CT---TA---TT---CTGGGAATGAACTCCGTATGCCTAAGTTAACCCATG
584 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * *
5637951 AAACGAGCGTGCGGGCGCTCAGCCGGGCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGG
649 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* ** * *
5638016 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCACTCCAGTCTGATCTTAGATTGGGAA
714 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
* * * * *
5638081 TGAACTCCATATGCCTAAGCCAAACAACGAAATGAGCGGGCGGGCGGGCGGGCGGGCACTATGCC
779 TGAACTCCGTATGCCTAAGCCAACCGACG-AA--A-CGAGCGGGCGGGCGGGCGGGCACTACGCC
*
5638146 GGCCAGAG-GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCGC
840 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
**
5638205 ATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * ** *
5638270 GCCTTCACGTGAAGTTTCATGGGAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACATTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * *
5638335 TACGGTTCGAGATTTTTTTAAATTTTTTCAGAAGGAGTTTTGGACCCAAACTTGGTAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
5638400 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* *
5638465 GACCATTTCAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
*
5638530 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
*
5638595 GGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGGCCCCTCCGATC-TCAG
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC-CCGATCGTC-G
* * * * * *
5638659 GAACCCCAATGCCGCCGGTCAGGTTCTCCGACGACGCTCTGACGATGGTGCCCCGACAAAGATAA
454 GAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* * * **
5638724 ATGCGGCACCAG--CAT--------------T-TGCTACCACAACCCTCAGTCTAGTCCGATCTT
519 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTT
* * * *
5638772 AGACTGGGAATGAACTCTGTAGGCTTAGACTGGGAATGAGCTCCGTATGCCTAAGTCAACCCATG
584 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* *
5638837 AAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGT
649 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* * * * * * *
5638902 CCCCCTCTGCGTGCTACCGATCTTGTTGCCGTAACCCTCGGTCTGGTCTAATCTTAGAATGGGAA
714 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
* * * * * * *
5638967 TGAACTTCGTATGCCTAACCCAACCGATGAAACGAGCGGGCGGGCGGGCGGTCACTATGTCGGCT
779 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCC
* *
5639032 AGAGAGATGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
844 AGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* * * *
5639088 ATCTTCATATTTCTACGTGCCAATGCCATTCTTACGGCTTGTAAATTCATAGAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
5639153 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCGAAACATTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * * ** *
5639218 TGTGGTTTGGGATTTTTTAAAATTTTTTCGGAATGAGTTTTCACCCCAAACTTGGTGGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* *
5639283 CTTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCCAAGTGTACAAGATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
* * *
5639348 GACCATTTGAAAAAAGTGTCCCCATTTTAGAGACTTTCATGGCTACTGGCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
5639413 TCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTC-ACGGTTTGATGAGGGATAGGGGGCCAACATA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGGGGCCAATATA
* * *
5639477 AGGGCCAAGTACCAGCACCCATCGCACATCAAGTGTGCACA-CCCGCCGGCCCCCCCGATCGTCG
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGG-CCCCCCGATCGTCG
* * * * * *
5639541 GAACCCCAATGCCGCCAGTAAGGTTCTCCGACGATGCTCCGACGATGGTGCCCTGACGAAGAGAA
454 GAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* * * * * *
5639606 ATGCGACACCAGCACATGCCCGAGCCCAGCATCTGCTGTCGCAAACCTTGGTCCGGTCTGATCTT
519 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTT
* * *
5639671 AGACTGGGAATGAACTCTGTATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGTCGACCCACG
584 AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * * * * * * *
5639736 AAACGAACGGGCGGGCACTCAACAGGCTAGAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGT
649 AAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT
* * * ** ** * *
5639801 CCTCTTCTACGTGCTATCGATCCTGCTGCTACAACCTTCGGTCTGGTCTGATCTTAGACTGGGAA
714 CCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
* * *** * **
5639866 TGAACACCATACT-CCTAAGTGTACCGATGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTATAC
779 TGAACTCCGTA-TGCCTAAGCCAACCGACGAAACGAGC--G--GGCGGGCGGGCGGGCACTACGC
* * * *
5639930 CGG-TAAAGAGACGGGATGCACAAACCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCAC
839 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*
5639989 ATCTACATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* **
5640054 GCATTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * * * *
5640119 TACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTAGCCCCAAAGTTGGTAGATGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
5640184 ACTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAAATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
5640249 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGGCAGCAAACCTGTAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT-GGCAGCAAACCTGTAAA
* *
5640314 ATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATAGGGGGCCAATATA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
** * * * * * *
5640379 AGGGTTAAGTTCCAGCACCCATCGCACATCATGTACGCACACCCCCCAGCCCCCCCGATCGCCGA
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGG
* * * * * **
5640444 AACCCCAATGCCGTCGGTCAGGTT-TTTCGTCGATTCTCCGACGATGGTGGCCCGGTGAAGAAAA
455 AACCCCAATGCCGCCGGTCAGGTTCTCT-GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAA
* *** *
5640508 ATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTATTGCAA-CCTGTGGTCCGGTCCGATCT
519 ATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT-CGGTCCGGTCCGATCT
*
5640572 TAGAATGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC-CCTGTATGCCTAAGTCAACCCA
583 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC-GTATGCCTAAGTCAACCCA
* * * * * * *
5640636 CGAAATGAGTGTGCGGGCGCTCAGTCGGCCAGAGGGGTGGGAT-CGCAAGCTGAGGATCGATCGG
647 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG
* ** * * * *
5640700 GTCCCCCTCTGCGTGCTGCCGATCCTGCTACTACAACCCTCAGTCCGATCTTATCTTAGATTGGG
712 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * *
5640765 AATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCAGACGGGCGGGCCGGCACTACA
777 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GG--G-CGGGCGGGCGGGCACTACG
* *
5640830 CCGGCCAGAGA-AC--AATGCGCAAGCCGTGGATCGATA-GGTGGTAGGTGGGTTTAGGCAT
838 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
* *
5640888 ATCTTAATATTTCAGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * *
5640953 GACTTCTCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA-TTTTCAAAGCTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAA-CTTT
* *
5641017 TTGGGGTTC-AGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
130 TTGCGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTG
* * * *
5641081 ATCCTTGTATTTTT-TTCAGCATGCATAAAAAAATTCA-ATGAAAAAGTCGAAGTGTACAAGATT
194 ATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTGTACAAGATT
* * * * *
5641144 TTGTGGCCATTTGAAAAAAATATCCCCATTTCAGACACTTTAATGGCTACTGGCGGCAAACCTAT
257 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * *
5641209 AAAATATCAAATGCCCTTTAAGAGGGTTTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
322 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
* **
5641274 ATAAGGGCCAGGTATGAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCTCCGATCG
387 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCC-CCGATCG
** * * *
5641338 TCGGAACCCCAATGCCGCCTTTCAGGTTCTCTGACGATGCTCTGGCGATGGTGCCCCGACGAAGA
451 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGA
* * * *
5641403 AAAATGTGGCACCAGCACTTGCCCGAGCCCAGCATGTGCTGCCGCAA-CCTGTGGTCCGGTCTGA
516 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT-CGGTCCGGTCCGA
*
5641467 TCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
580 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * ** * *
5641532 AACGAAACAAGCGAGCGGGCGCTCAGCCGGCCAGAGGGGCGAAATGCGTAAGCTGGGGATCGGTC
645 CACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC
* * * * * * * * *
5641597 GGGTCCCCCTCTGCGTACTGTCGATCTTGTTGCTGAAACACTTGGTCCGGTCTAATCTTAGACTG
710 GGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTG
* ** ** ** * *
5641662 GGAATGAACTCTGTATGCCTAAGCCAACCGATAAAATAAGCGGGCGGGCGGATGGGCACTATGCT
775 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCC
* *
5641727 GGCCAGAGAGACGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-GGTAC
840 GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*
5641786 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* **
5641851 GCATTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * * * *
5641916 TACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTAGCCCCAAAGTTGGTAGATGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
5641981 ACTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAAATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
5642046 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
5642111 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGAGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * *
5642176 GGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGCCCGGCCCCCCGACCGA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA---CCCC-CCCGGCCCCCCGATCGT
*
5642241 CGGAACCTCAATGCCGCCGGTCAGGTTCTC---C---G----G-CGATGGTGCCCCGACGAAGAA
452 CGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAA
* * *
5642295 AAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCGTCGGTCCGGTCCGATC
517 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC
* * * *
5642360 TTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTCTGCCTAAGTCAAGCCA
582 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * * * ** *
5642425 TGAAAAGAGCGTGCGGGCGCTCAACCGGCCAGAAGGACAGGATGCGCAAGCTGTCGATTGGTCGG
647 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG
* * * * * * *
5642490 GACCCACTCTGCATGCCGCCGATCCTGCTGCTGTAACCCTCGGTCCGGTCAGATCTTAGACTGGG
712 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * * * *
5642555 AATGAACTCCGTTTGCCTAAGCCAACCGACGAAATGAGCGGGCGGGCGTGCAGGCACTACACCGG
777 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGG
* * * *
5642620 CTAGAAAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCAC
842 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*
5642678 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* *
5642743 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCA-CATTTTTTGAAACTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA-TTTTTGAAACTTT
* * * * * *
5642807 TTACGGTTTGGGATTTTTTAAAATTTTTTCGAAAAGAGTTTTGGCCCTAAACTTGGTAGACGTGA
130 TTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGA
* * *
5642872 TCCTAGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGGAGTGTACAAGATTTTG
195 TCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTG
* * * *
5642937 TGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAAACTGTAAA
260 TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAA
* * * *
5643002 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGATTGATGACGGTTAGGGGGCCAATATA
325 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
* * * * * *
5643067 AGGGCTAGGTACCAGCA-CCATCGCACATCATTTGTGCACACCCCCCCAGCTGCCCCGATCGTCG
390 AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGC-CCCCCGATCGTCG
* *
5643131 AAACCCCAATGCCGTCGGTCAGGTTCTCCAGCAATGCTCCGACGATGCTCCGACGATGGTGCCCC
454 GAACCCCAATGCCGCCGGTCAGGTTCT----C--TG----G-CGATGCTCCGACGATGGTGCCCC
** * * * * *
5643196 GGTGAAGAAAAATGTGGCACCTGCAAATGCCCGAGCCTAGCATGTGCTACCGCAACCCTCGGT-C
508 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
*
5643260 --T--GATGC--A-ATCTGGGAATGAACTCCGTATGCTTAGACTGCGAATGAACTCCGTATGCCT
573 GGTCCGAT-CTTAGA-CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
5643318 AAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAAGGGCGGGATGCGCAAGCCGG
636 AAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * ** * * * * *** * *
5643383 TGATCGGTTGAGTCCTACTCTGTGGGCTGCCGATGCTGCCGCTATAACCCTCGGTTCGGTCAGAT
701 GGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGAT
* * *
5643448 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGCGGGCGGGCGTGCGGG
766 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * *
5643513 CACTACGTCGGCCAGAGAGACGGGATGCACAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAG
831 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
5643578 GCAC
896 GCAC
*
5643582 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* **
5643647 GCATTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * * * *
5643712 TACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACTTTTAGCCCCAAAGTTGGTAGATGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
* * *
5643777 ACTTGTATTTTTGTTGACATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAAATTTTGT
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
*
5643842 GACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAA
261 GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* * *
5643907 TCTCAAATGCTCTTCAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGAGGCCAATATAA
326 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
* * *
5643972 GGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCCGCCCGGCCCCCCGACCGA
391 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA---CCCC-CCCGGCCCCCCGATCGT
* *
5644037 CGGAACCTCAATGCCTCCGGTCAGGTTCTC---CG--G-T-----GATGGTGCCCCGACGAAGAA
452 CGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAA
* * *
5644091 AAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGACGCAACCGTCGGTCCGGTCCGATC
517 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC
* * * *
5644156 TTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTCTGTCTGCCTAAGTCAAGCCA
582 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * * * ** *
5644221 TGAAAAGAGCGTGCGGGCGCTCAACCGGCCAGAAGGACAGGATGCGCAAGCTGTCGATTGGTCGG
647 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGG
* * * * * *
5644286 GACCCACTCTGCATGCCGCCGATCCTGCTGCCGTAACCCTCGGTCCGGTCAGATCTTAGACTGGG
712 GTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * * * * *
5644351 AATGAACTCCGTTTGCCTAAGCCAACCGACAAAATGAGCGGGCGGGCGTGCAGGCACTACACCGG
777 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGG
* * *
5644416 CCAGAAAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTTGGTGGGTTTAGGCAC
842 CCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
*
5644474 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * *
5644539 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTCTTCACGATTTTTGAAACTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * *
5644604 TGTGGTTCAAGA-TTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCCAAACTTGGTAGACGTGA
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG-CCCCAAACTTGGTAGACGTGA
* * *
5644668 TCCTTGTTAGTTTTT-CTGGGATGCACAAAAAAATTCAACTAAAAACTCGAAGTGTACAAGATTT
195 TCCTTG-TA-TTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
*
5644732 TGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
258 TGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTA
*
5644797 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGGCAATA
323 AAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
* * *
5644862 TAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACACCCCCGGCCCCCTCGATCAT
388 TAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC-CGATCGT
* * * * * *
5644927 CGGAACCCCAATGCCGCCAGTCAGGTTCTCGGGCGATGCTCCAATGATGGTGCACCGACAAAGAA
452 CGGAACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAA
* * * * *
5644992 AAATGAGGCACCAGCACATGCCCAAGCCTAGCATGTGCTGTCGTAA----C---CC--T-C-A--
517 AAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATC
* *
5645044 TT---CT-GG--T----T-CG-AT-CTTAGACTGGGAATGAACTCTGTATGCGTAAGTCAACCCA
582 TTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCA
* * * * * *
5645096 CGAAACGAGTGTGTGGGCACTCAGTCGGCCAGAGGGGCGGGATGCACAAGTCC-GGGATCGGTTG
647 CGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-CCGGGGATCGGTCG
* * * *
5645160 GCTCCCCCTCTGCGTGCTGTCGATCCTGCTACCGCAACCCTCGGTCCGGTCTGATCTTAGACTAG
711 GGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGG
* * * *
5645225 GCATGAACTCCATATACCTAGGCCAACCGACGAAACGAGCGGGCGGGCAGGCGGGCGGGCACTAC
776 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC--G--GGCGGGCGGGCACTAC
* * **
5645290 GCCGGCCAGAAAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAACCAC
837 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
** * *
5645353 ATCTTCATATTTCTTTGTGCCAATGCCATTTTCATGGCTAGTAAATTCATACAATGGTCCCTTAA
1 ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * ** * *
5645418 GCCTTCACATCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTAAAATTTTT
66 GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
* * * *
5645483 TACGGTTCAAGATTTTTTAAAATTTGTTCGTAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
131 TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
** **
5645548 CCTTGTATTTTTGCGGGTGTGCACAAAAAAATTCA
196 CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
5645583 TATTTTTGTG
Statistics
Matches: 11932, Mismatches: 1383, Indels: 562
0.86 0.10 0.04
Matches are distributed among these distances:
857 1 0.00
858 164 0.01
859 4 0.00
860 14 0.00
861 4 0.00
862 3 0.00
864 2 0.00
865 373 0.03
866 144 0.01
867 17 0.00
868 4 0.00
869 2 0.00
870 124 0.01
871 208 0.02
872 327 0.03
873 48 0.00
874 343 0.03
875 196 0.02
876 10 0.00
877 121 0.01
878 88 0.01
879 271 0.02
880 32 0.00
881 1 0.00
882 120 0.01
883 457 0.04
884 30 0.00
885 5 0.00
886 237 0.02
887 6 0.00
888 40 0.00
889 40 0.00
890 162 0.01
891 467 0.04
892 1009 0.08
893 317 0.03
894 374 0.03
895 808 0.07
896 481 0.04
897 292 0.02
898 1208 0.10
899 1013 0.08
900 416 0.03
901 497 0.04
902 425 0.04
903 238 0.02
904 649 0.05
905 27 0.00
906 1 0.00
907 1 0.00
908 37 0.00
909 7 0.00
910 67 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
ATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
GCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTT
TGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT
CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGT
GACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGTCGGA
ACCCCAATGCCGCCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAAT
GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAG
ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
ACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCC
CCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATG
AACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAG
AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAC
Found at i:5639697 original size:26 final size:26
Alignment explanation
Indices: 5639668--5639720 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5639658 CCGGTCTGAT
* *
5639668 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
5639694 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCGTATG
5639720 C
1 C
5639721 CTAAGTCGAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCGTATG
Found at i:5640599 original size:26 final size:26
Alignment explanation
Indices: 5640570--5640622 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
5640560 CCGGTCCGAT
5640570 CTTAGAATGGGAATGAACTCC-GTATG
1 CTTAGAATGGGAATGAAC-CCTGTATG
*
5640596 CTTAGACTGGGAATGAACCCTGTATG
1 CTTAGAATGGGAATGAACCCTGTATG
5640622 C
1 C
5640623 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 2 0.08
26 23 0.92
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACCCTGTATG
Found at i:5641193 original size:899 final size:894
Alignment explanation
Indices: 5637915--5645560 Score: 9807
Period size: 892 Copynumber: 8.6 Consensus size: 894
5637905 CAATCTTATT
* * *
5637915 CTGGGAATGAACTCCGTATGCCTAAGTTAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGGCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
*
5637980 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGGCCCCCTCTGCGTGCTGCCGATCCTGCTGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
* ** * * * * *
5638045 CACAACCCTCACTCCAGTCTGATCTTAGATTGGGAATGAACTCCATATGCCTAAGCCAAACAACG
131 TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* *
5638110 AAATGAGCGGGCGGGCGGGCGGGCGGGCACTATGCCGGCCAGAG-GACGGGATGCGCAAGCCGTG
196 AAATGA----GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGTG
* **
5638174 GATCGATAGGGTGGTAGGTGGGTTTAGGCGCATCTTCATATTTCTATGTGCCAATGCCATTTTTA
256 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
*
5638239 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGACGACTCG
321 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * *
5638304 TTTTCTATTTTTCACGATTTTCAAAACATTTTACGGTTCGAGATTTTTTTAAATTTTTTCAGAAG
386 TTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* *
5638369 GAGTTTTGGACCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
451 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTC
*
5638434 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACAC
516 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
5638499 TTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTG
581 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
5638564 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
646 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
* *
5638629 TGCACACCCCCCCGGCCCCTCCGATC-TCAGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGA
711 TGCACA-CCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTT-TTCGACGA
* * * * * ** *
5638693 CGCTCTGACGATGGTGCCCCGACAAAGATAAATGCGGCACCAGCATTTG--CTA--CCA-CA---
773 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGT
* ** * *
5638750 ---A--C--CCTCAGTCTAGTCCGATCTTAGACTGGGAATGAACTCTGTAGGCTTAGA
838 GCTACGCAACCT-GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * *
5638801 CTGGGAATGAGCTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCTGGCCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * *
5638866 GAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGATCTTGTTGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
*** * * * * * *
5638931 CGTAACCCTCGGTCTGGTCTAATCTTAGAATGGGAATGAACTTCGTATGCCTAACCCAACCGATG
131 TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * * * **
5638996 AAACGAGCGGGCGGGCGGGCGGTCACTATGTCGGCTAGAGAGATGGGATGCGTAAGCCGTGGATC
196 AAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGA-CGGATGCACAAGCCGTGGATC
* * *
5639061 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTCTTACGGC
260 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
*
5639126 TTGTAAATTCATAGAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
325 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * ** * *
5639191 CTATTTTTCATGATTTTCGAAACATTTTGTGGTTTGGGATTTTTTAAAATTTTTTCGGAATGAGT
390 CTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
** * * *
5639256 TTTCACCCCAAACTTGGTGGACGTGATCTTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
455 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTCAGCT
* * * *
5639321 AAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGAGACTTTC
520 AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
*
5639386 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTC-ACGG
585 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GG
* *
5639450 TTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCGCACATCAAGTGTGC
649 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
* * * *
5639515 ACACCCGCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCAGTAAGGTTCTCCGACGATGCTC
714 ACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT-TTCGACGATGCTC
* * * * * *
5639580 CGACGATGGTGCCCTGACGAAGAGAAATGCGACACCAGCACATGCCCGAGCCCAGCATCTGCTGT
778 CGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCT-A
* *
5639645 CGCAAACCTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGA
842 CGC-AACC-TGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * * * * *
5639700 CAGGGAATGAACTCCGTATGCCTAAGTCGACCCACGAAACGAACGGGCGGGCACTCAACAGGCTA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * * **
5639765 GAGGGGTGGGATGCGCAAGCCGGGGATCGGCCGGGTCCTCTTCTACGTGCTATCGATCCTGCTGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
* * * * *** *
5639830 TACAACCTTCGGTCTGGTCTGATCTTAGACTGGGAATGAACACCATACT-CCTAAGTGTACCGAT
131 TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA-TGCCTAAGCCAACCGAC
* ** * * *
5639894 GAAACGAGCGGGCAGGCGGGCGGGCGGGCACTATACCGG-TAAAGAGACGGGATGCACAAACCGT
195 GAAATGAGC--G--GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGT
*
5639958 GGATCGATA-GGTGGTAGGTGGGTTTAGGCACATCTACATATTTCTGCGTGCCAATGCCATTTTT
255 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTT
*
5640022 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAGACGACTC
320 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
*
5640087 GTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA
385 GTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA
* * * * *
5640152 GGACTTTTAGCCCCAAAGTTGGTAGATGTGATACTTGTATTTTTGTT-GACATGCACAAAAAAAT
450 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAG-CATGCACAAAAAAAT
*
5640216 TCAGCTAAAAACTCGAAGTGTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
514 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
*
5640281 ACTTTAATGGCTACTGGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTC
579 ACTTTAATGGCTACT-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* ** *
5640346 TCGAGATTTGATGAGGGATAGGGGGCCAATATAAGGGTTAAGTTCCAGCACCCATCGCACATCAT
643 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
** * * * * *
5640411 GTACGCACACCCCCCAGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTTTTCGTCG
708 GTGTGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG-TTTTCGACG
* * ** * *
5640476 ATTCTCCGACGATGGTGGCCCGGTGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATG
772 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATG
* *
5640541 TGCTATTGCAACCTGTGGTCCGGTCCGATCTTAGAATGGGAATGAACTCCGTATGCTTAGA
837 TGCTA-CGCAACC--TGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * *
5640602 CTGGGAATGAAC-CCTGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGTCGGCC
1 CTGGGAATGAACTCC-GTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCC
* * * *
5640666 AGAGGGGTGGGAT-CGCAAGCTGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTA
65 AGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
* * * * *
5640730 CTACAACCCTCAGTCCGATCTTATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
130 CTACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * * * *
5640795 GAAACGAGCGGGCAGACGGGCGGGCCGGCACTACACCGGCCAGAGA-AC-AATGCGCAAGCCGTG
195 GAAATGAGC-GG--G-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGATGCACAAGCCGTG
* * *
5640858 GATCGATA-GGTGGTAGGTGGGTTTAGGCATATCTTAATATTTCAGCGTGCCAATGCCATTTTTA
256 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
* *
5640922 TGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCTCGTGAAGTTTCATGGCAAGACGACTCG
321 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* ** * *
5640987 TTTTCTATTTTTCACGATTTTCAAAGCTTTTTGGGGTTCAGGATTTTTTAAAATTTTTTTGGAAG
386 TTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
*
5641052 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT-TTCAGCATGCATAAAAAAATT
451 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-AGCATGCACAAAAAAATT
* * * * *
5641116 CA-ATGAAAAAGTCGAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAATATCCCCATTTCAGAC
515 CAGCT-AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGAC
* * * * * *
5641180 ACTTTAATGGCTACTGGCGGCAAACCTATAAAATATCAAATGCCCTTTAAGAGGGTTTGAGTTCT
579 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* **
5641245 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAGGTATGAGCACCCATCGCACATCATG
644 CGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * ** *
5641310 TGCGCACACCCCCCGGCCCCTCCGATCGTCGGAACCCCAATGCCGCCTTTCAGGTTCTCTGACGA
709 TGTGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTTTC-GACGA
* * *
5641375 TGCTCTGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACTTGCCCGAGCCCAGCATGT
773 TGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGT
* * *
5641440 GCTGCCGCAACCTGTGGTCCGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCTTAGA
838 GCT-ACGCAACC--TGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * *
5641500 CTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACAAGCGAGCGGGCGCTCAGCCGGCCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
** * * * * *
5641565 GAGGGGCGAAATGCGTAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTACTGTCGATCTTGTTGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
* * * * *
5641630 TGA-AACACTTGGTCCGGTCTAATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAT
131 T-ACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* * ** * * **
5641694 AAAATAAGCGGGCGGGCGGATGGGCACTATGCTGGCCAGAGAGACGGGATGCGTAAGCCGTGGAT
195 GAAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGTGGAT
* *
5641759 CGATAGGGTGGTAGGTGGGTTT-GGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
259 CGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGG
*
5641823 CTTGTAAATTCATACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
324 CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
* *
5641888 TCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAC
389 TCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * * *
5641953 TTTTAGCCCCAAAGTTGGTAGATGTGATACTTGTATTTTTGTT-GACATGCACAAAAAAATTCAG
454 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAG-CATGCACAAAAAAATTCAG
*
5642017 CTAAAAACTCGAAGTGTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
518 CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
5642082 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
583 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
* *
5642147 GTTTGATAAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTG
648 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTG
* * * *
5642212 CACACCCCCCCGCCCGGCCCCCCGACCGACGGAACCTCAATGCCGCCGGTCAGG---T------T
713 CACA-CCCCCCG---GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTTTCGACGAT
*
5642268 -CTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG
774 GCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTG
5642332 CTGACGCAACCGTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
839 CT-ACGCAACC-T-GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * * * *
5642391 CTAGGAATGAACTCTGTCTGCCTAAGTCAAGCCATGAAAAGAGCGTGCGGGCGCTCAACCGGCCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * ** * * * * *
5642456 GAAGGACAGGATGCGCAAGCTGTCGATTGGTCGGGACCCACTCTGCATGCCGCCGATCCTGCTGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
** * *
5642521 TGTAACCCTCGGTCCGGTCAGATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCCAACCGACG
131 TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * *
5642586 AAATGAGCGGGCGGGCGTGCAGGCACTACACCGGCTAGAAAGACGGGATGCACAAGCCGTGGATC
196 AAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGTGGATC
* *
5642651 GATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
260 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
5642716 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
325 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* ** * * *
5642781 TTATTTTTCAC-ATTTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGAAAAGAG
390 CTATTTTTCACGA-TTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAG
* * * *
5642845 TTTTGGCCCTAAACTTGGTAGACGTGATCCTAGTATTTTTGTTGGCATGCACAAAAACATTCAGC
454 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTCAGC
* *
5642910 TAAAAACTCGGAGTGTACAAGATTTTGTGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTT
519 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
* * * *
5642975 AATGGCTATTGGTAGCAAAACTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGG
584 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* * * * * *
5643040 ATTGATGACGGTTAGGGGGCCAATATAAGGGCTAGGTACCAGCA-CCATCGCACATCATTTGTGC
649 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
* ** * *
5643104 ACACCCCCCCAGCTGCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCAGCAATGCT
714 ACA-CCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGG-T-T-------T--T
** * * *
5643169 CCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCACCTGCAAATGCCCGAGCCT
767 -CGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* *
5643234 AGCATGTGCTACCGCAACC--CT-CGGTCTGATGC--A-ATCTGGGAATGAACTCCGTATGCTTA
831 AGCATGTGCTA-CGCAACCTGGTCCGGTCCGAT-CTTAGA-CTGGGAATGAACTCCGTATGCTTA
5643293 GA
893 GA
* * *
5643295 CTGCGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTCGGCCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * ** * * * *
5643360 GAAGGGCGGGATGCGCAAGCCGGTGATCGGTTGAGTCCTACTCTGTGGGCTGCCGATGCTGCCGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
* * * *
5643425 TATAACCCTCGGTTCGGTCAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG
131 TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * *
5643490 AAATGAGCGGGCGGGCGTGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCTGTGGATC
196 AAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGTGGATC
*
5643555 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
260 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
*
5643620 TTGTAAATTCATACAATGGTCCCTTAAGCATTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
325 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* *
5643685 CTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGACT
390 CTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * * *
5643750 TTTAGCCCCAAAGTTGGTAGATGTGATACTTGTATTTTTGTT-GACATGCACAAAAAAATTCAGC
455 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAG-CATGCACAAAAAAATTCAGC
* *
5643814 TAAAAACTCGAAGTGTACAAAATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTT
519 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
*
5643879 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTTCTCGAGG
584 AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
* *
5643944 TTTGATAAGGGATAGGAGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
649 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGC
* * * * * *
5644009 ACACCCCCCCGCCCGGCCCCCCGACCGACGGAACCTCAATGCCTCCGGTCAGGTTCTC--CG--G
714 ACA-CCCCCCG---GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTTTCGACGATG
5644070 -T-----GATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGC
775 CTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGC
5644129 TGACGCAACCGTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
840 T-ACGCAACC-T-GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * * * *
5644187 CTAGGAATGAACTCTGTCTGCCTAAGTCAAGCCATGAAAAGAGCGTGCGGGCGCTCAACCGGCCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * ** * * * * *
5644252 GAAGGACAGGATGCGCAAGCTGTCGATTGGTCGGGACCCACTCTGCATGCCGCCGATCCTGCTGC
66 GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
*** * * *
5644317 CGTAACCCTCGGTCCGGTCAGATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCCAACCGACA
131 TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * *
5644382 AAATGAGCGGGCGGGCGTGCAGGCACTACACCGGCCAGAAAGACGGGATGCACAAGCCGTGGATC
196 AAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGTGGATC
* *
5644447 GATAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
260 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
*
5644512 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTT
325 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * ** ** ** *
5644577 TTATTCTTCACGATTTTTGAAACTTTTTGTGGTTCAAGA-TTTTTAAAATTTTTTCGGAAGGATT
390 CTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * *
5644641 TTTGGCCCCCAAACTTGGTAGACGTGATCCTTGTTAGTTTTT-CTGGGATGCACAAAAAAATTCA
455 TTTGG-CCCCAAACTTGGTAGACGTGATCCTTG-TA-TTTTTGTTAGCATGCACAAAAAAATTCA
* *
5644705 ACTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCTCATTTCAGACACT
517 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
5644770 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
582 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
5644835 GGTTTGATGAGGGATAGGGGGGCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
647 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGT
* * * * *
5644900 GCACACACCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGCCAGTCAGGTTCTCGGGCGATG
712 GCACAC-CCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTTTC-GACGATG
* * * * * * *
5644965 CTCCAATGATGGTGCACCGACAAAGAAAAATGAGGCACCAGCACATGCCCAAGCCTAGCATGTGC
775 CTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* *
5645030 TGTCGTAA-C----CC--T-C-A--TT---CT-GG--T----T-CG-AT-CTTAGA
840 T-ACGCAACCTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * * *
5645062 CTGGGAATGAACTCTGTATGCGTAAGTCAACCCACGAAACGAGTGTGTGGGCACTCAGTCGGCCA
1 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * * * *
5645127 GAGGGGCGGGATGCACAAG-TCCGGGATCGGTTGGCTCCCCCTCTGCGTGCTGTCGATCCTGCTA
66 GAGGGGCGGGATGCGCAAGCT-GGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTG
** * * * * *
5645191 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTAGGCATGAACTCCATATACCTAGGCCAACCGAC
130 CTACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC
* *
5645256 GAAACGAGCGGGCGGGCAGGCGGGCGGGCACTACGCCGGCCAGAAAGACGGGATGCACAAGCCGT
195 GAAATGAGCGGGC--G--GGCGGGCGGGCACTACGCCGGCCAGAGAGAC-GGATGCACAAGCCGT
** ** *
5645321 GGATCGATAGGGTGGTAGGTGGGTTTAACCACATCTTCATATTTCTTTGTGCCAATGCCATTTTC
255 GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTT
* * *
5645386 ATGGCTAGTAAATTCATACAATGGTCCCTTAAGCCTTCACATCAAGTTTCATGGCAAGACGACTC
320 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
* * * ** * *
5645451 GTTTTCTATTTTTCACAATTTTTAAAATTTTTTACGGTTCAAGATTTTTTAAAATTTGTTCGTAA
385 GTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAA
5645516 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
450 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
5645561 CGGGTGTGCA
Statistics
Matches: 5941, Mismatches: 692, Indels: 262
0.86 0.10 0.04
Matches are distributed among these distances:
874 1 0.00
875 174 0.03
876 2 0.00
877 8 0.00
878 3 0.00
879 227 0.04
880 27 0.00
882 124 0.02
883 448 0.08
884 4 0.00
885 2 0.00
886 240 0.04
887 3 0.00
888 33 0.01
890 41 0.01
891 414 0.07
892 811 0.14
893 220 0.04
894 10 0.00
895 25 0.00
896 6 0.00
897 6 0.00
898 744 0.13
899 662 0.11
900 10 0.00
901 491 0.08
902 390 0.07
903 27 0.00
904 647 0.11
905 38 0.01
906 3 0.00
907 1 0.00
908 30 0.01
909 2 0.00
910 67 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
GAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGC
TACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
AAATGAGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGATGCACAAGCCGTGGATCG
ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCT
TGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTC
TATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTT
TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCAC
ACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTTTCGACGATGCTCCGA
CGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTACGCA
ACCTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
Found at i:5641497 original size:26 final size:26
Alignment explanation
Indices: 5641468--5641520 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5641458 CCGGTCTGAT
*
5641468 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5641494 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5641520 C
1 C
5641521 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5643178 original size:11 final size:11
Alignment explanation
Indices: 5643164--5643188 Score: 50
Period size: 11 Copynumber: 2.3 Consensus size: 11
5643154 TTCTCCAGCA
5643164 ATGCTCCGACG
1 ATGCTCCGACG
5643175 ATGCTCCGACG
1 ATGCTCCGACG
5643186 ATG
1 ATG
5643189 GTGCCCCGGT
Statistics
Matches: 14, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 14 1.00
ACGTcount: A:0.20, C:0.32, G:0.28, T:0.20
Consensus pattern (11 bp):
ATGCTCCGACG
Found at i:5646892 original size:746 final size:700
Alignment explanation
Indices: 5646013--5647954 Score: 1942
Period size: 703 Copynumber: 2.7 Consensus size: 700
5646003 CAAAACGAGT
*
5646013 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTG
1 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
5646078 AGTTTAGGCACATCTTCATATTTCTACTTG-CATATTCCATTTTTATGGCTT-TCAAATTCATGC
66 AGTTTAGGCACATCTTCATATTTCTACATGCCA-ATGCCATTTTTATGGCTTGT-AAATTCATAC
5646141 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTCATTTTCTACTTTTCACGAT
129 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTCATTTT-TACTTTT-ACGAT
5646206 TTTTGAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
192 TTTTG-AAACTTTTT--GGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* *
5646271 TTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAGAAACTCAAAGT
254 TTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGT
* * * *
5646336 GTACAAGATTTTGTGACCATTTGAAAAAAAGTATCCCCATTTTAAACAATTTAATGGCTACTGGC
319 GTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
5646401 AGCAAACCTATAAAATCTCAAATGCTCTTTGAGGGGGTGTGAGTTCCCAAGGTTTGATGAGGGAT
383 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT
* * * *
5646466 AGGGGGCCAATATAATGGCCAAGTACATGC-CCAA-GCCCAGCATGTGC-TACTGTAACCCTCGG
448 AGGGGGCCAATATAAGGGCCAAGTACA-GCACCAACGCACAGCATGTGCGCAC---AACCCCCGG
**
5646528 TCCAGTCTGATTTTAGACTGAGAATGAACTCC-ATATGCC-TAAGTC-G-AC-CC-ATGAAACGA
509 -CC-CCCTGA---TAG--T-AG---GAAC-CCTA-ATGCCGTAAGTCAGTACTCCGATGAAAC-A
* * ** * *
5646587 GC-GTGCA-GGCGCTCAGCCGGCCAGAAGGCTGGGATGCACAAGC-CGAGGATCCGCCAG-GTCC
560 CCGGTG-ATGGCGC-C--CCGG-CA-AA-G-AGAAAT--AC-AGCAC-AGCATACGCCAGAG---
* * * * **
5646648 CCTCTACATGCTGCCAATCCTACTGCCGTAACCCTCGAT-TCGGTCTGATCTTAGACTGGGAATG
610 CC-CAACATG-TG------CTA---CCGTAACCCTCGGTCT-GATCCGATCTTAGAC-CAGAATG
* *
5646712 AACTCCGTGTACCTAAGCCAACCGACCAAACGAGCGGGCCGATGGGC
662 AACTCCGTATACCTAAGCCAACCGACCAAACGA----G-C--T-GAC
* * * *
5646759 GGGCAGGCACTATGCCGGCCAAAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
1 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
5646824 GGTTTAGGCATATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
66 AGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
5646889 TGGTCCCTTAAGCATTCACGTGAAGTTTCATGGC-A-A--G---A---TGAC---T-CG--TTTT
131 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTCATTTTTACTTTTACGATTTTT
* * * * *
5646938 ----CTATTT--TTCACGA--TTTTAAACTTTTTTCGGAATGAGTTTTGGCCCCAAACATGGTA-
196 GAAACTTTTTGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
* * * * *
5646994 AACGTGATCTTTGTATTTCTGTTGGCATGCATAATAAAATTCAGCTAAAAACTTGAAGTGTACCA
261 AA-GTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* *
5647059 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGTAGCAAAC
325 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* *
5647124 CTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
390 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGC
* * * *
5647189 CAATATAGGGGCCAAGTACCAGCACTAATCGCACATCATGTGCGCACATCCCCCGGCCCCCTGAT
455 CAATATAAGGGCCAAGTA-CAGCACCAA-CGCACAGCATGTGCGCACAACCCCCGGCCCCCTGAT
* * ** * * ** * * *
5647254 CGTCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGGTGATGGTGCCCTGGCAAA
518 AGTAGGAACCCTAATGCCGTAAGTCA-GTACTCCGATGAAACACCGGTGATGGCGCCCCGGCAAA
* * *
5647319 GAGAAATACGGCTACAGCATATGCCCGAGCCCAACATGTGCTACCGTAACCCTCGGTCTGATCCG
582 GAGAAATACAGC-ACAGCATACGCCAGAGCCCAACATGTGCTACCGTAACCCTCGGTCTGATCCG
* * ** *
5647384 ATCTTAGACCAGAATGAACTCCGTATGCCTAAGCCAATCGATGAAATGAGCTGAC
646 ATCTTAGACCAGAATGAACTCCGTATACCTAAGCCAACCGACCAAACGAGCTGAC
* * *
5647439 GGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATAGATAGGGTGGTAGGTT
1 GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
**
5647504 AGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
66 AGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* * * * * * *
5647569 TGGTCCCTTAAGACTTCACGTGAAGTTTCACGGTAAGACGACTCGTTTTTTATTTTTAATGATTT
131 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTC-ATTTTTACTTTT-ACGATTT
* * *
5647634 TTGAAACATTTTGTGGTTCAAGATTTTTTAAAATTTCTTCGGAAGGAGTTTTGGCTCCAAGCTTG
194 TTGAAAC-TTTT-TGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* * * * *
5647699 GTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAAATTAAGCCAAAAACTCGAAGTGTA
257 GTAGAAGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTA
*
5647764 CAAGATTTTGT----A-TTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCA
322 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
5647824 AACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGG
387 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGG
* * * * *
5647889 GGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTCCGCACACCCCCCCGGCCCCC
452 GGCCAATATAAGGGCCAAGTA-CAGCA-CCAACGCACAGCATGTGCGCACA-ACCCCCGGCCCCC
5647954 T
514 T
5647955 CGATCGCCGG
Statistics
Matches: 1014, Mismatches: 130, Indels: 146
0.79 0.10 0.11
Matches are distributed among these distances:
680 150 0.15
681 2 0.00
682 1 0.00
683 1 0.00
684 1 0.00
688 32 0.03
689 26 0.03
690 1 0.00
691 2 0.00
692 3 0.00
694 1 0.00
696 1 0.00
698 6 0.01
699 6 0.01
700 2 0.00
701 2 0.00
702 11 0.01
703 155 0.15
704 20 0.02
705 8 0.01
706 17 0.02
707 2 0.00
708 102 0.10
709 3 0.00
710 6 0.01
711 11 0.01
712 2 0.00
715 4 0.00
716 124 0.12
717 124 0.12
719 17 0.02
720 2 0.00
723 5 0.00
728 4 0.00
730 2 0.00
732 1 0.00
735 2 0.00
736 1 0.00
739 1 0.00
742 1 0.00
744 1 0.00
745 1 0.00
746 147 0.14
747 3 0.00
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.28
Consensus pattern (700 bp):
GGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
AGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGGCTCATTTTTACTTTTACGATTTTT
GAAACTTTTTGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
AAGTGATCCTTGTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACAGCACCAACGCACAGCATGTGCGCACAACCCCCGGCCCCCTGATAGT
AGGAACCCTAATGCCGTAAGTCAGTACTCCGATGAAACACCGGTGATGGCGCCCCGGCAAAGAGA
AATACAGCACAGCATACGCCAGAGCCCAACATGTGCTACCGTAACCCTCGGTCTGATCCGATCTT
AGACCAGAATGAACTCCGTATACCTAAGCCAACCGACCAAACGAGCTGAC
Found at i:5648120 original size:26 final size:25
Alignment explanation
Indices: 5648091--5648142 Score: 77
Period size: 25 Copynumber: 2.0 Consensus size: 25
5648081 CTGATCCGAT
*
5648091 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGG-ATGAACTCCGTATG
*
5648117 CTTAAATTGGGATGAACTCCGTATG
1 CTTAAACTGGGATGAACTCCGTATG
5648142 C
1 C
5648143 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 15 0.62
26 9 0.38
ACGTcount: A:0.27, C:0.19, G:0.25, T:0.29
Consensus pattern (25 bp):
CTTAAACTGGGATGAACTCCGTATG
Found at i:5649918 original size:26 final size:26
Alignment explanation
Indices: 5649889--5649941 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5649879 CCGGTCCGAT
5649889 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
* *
5649915 CTTAGACTGGGAATGAACTTCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
5649941 C
1 C
5649942 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:5650806 original size:26 final size:26
Alignment explanation
Indices: 5650777--5650829 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5650767 CCGGTCCGAT
*
5650777 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
*
5650803 CTTAGATTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
5650829 C
1 C
5650830 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:5651293 original size:897 final size:899
Alignment explanation
Indices: 5647357--5652787 Score: 6779
Period size: 898 Copynumber: 6.1 Consensus size: 899
5647347 GCCCAACATG
* **
5647357 TGCTACCGTAACCCTCGGTCTGATCCGATCTTAGAC-CAGAATGAACTCCGTATGCCTAAGCCAA
1 TGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
5647421 -TCGATGAAATGAGC-T----GACGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGC
66 CT-GACGAAATGAGCGTGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* ** **
5647480 CGTGGATAGATAGGGTGGTAGGTTAGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATT
130 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATT
* * *
5647545 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGACTTCACGTGAAGTTTCACGGTAAGACGA
195 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * ** * *
5647610 CTCGTTTTTTATTTTTAATGATTTTTGAAACATTTTGTGGTTCAAGATTTTTTAAAATTTCTTCG
260 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCG
* * *
5647675 GAAGGAGTTTTGGCTCCAAGCTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * *
5647740 ATTAAGCCAAAAACTCGAAGTGTACAAGATTTTGT----A-TTGAAAAAAGTGTCCCTATTTCAG
390 ATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
5647800 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTTAAATGCTCTTTAAGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
5647865 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * **
5647930 TGTCCGCACACCCCCCCGGCCCCCTCGATCGCCGGAACCCCAATGTCGTCGGTCAGGTTCAACGG
585 TGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* ** *
5647995 TGATGCTCCAACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATACCCGAGCCCAGCA
649 TGATGCTCCGACGATGGTG-CCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * * * * *
5648060 TGTGTTGCTGCAACACTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAAATT
713 TGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * * *
5648125 GGG-ATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGTGCGGGTGCTCAGTCGGCCAGA
778 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * *** * * * *
5648189 GGGGCAGGATTTTGCAAGTCGGGGATCGATTGGGTCCCCCTCTACATGCTGCCAATCC
843 AGGGCGGGA-TGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCAATCC
* * * * * *
5648247 TGCTACAGCAACCCTCAGTCCGGTTCGATCTTAGACTGGGAATGAACTCCGTATGACTAAGCCAA
1 TGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
5648312 CTGACGAAACT-AGCGTGCGGACGGGTGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGCA
66 CTGACGAAA-TGAGCGTG-GG--GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * *
5648376 AGTCGTAGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTT-TCGCATGCCAATGC
127 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-ACATGCCAATGC
*
5648440 CATTTTCTA--GCTTGTAAATTCATACAATGGTCCCCTTTAGCCTTCACGTGAAGTTTCATGGCA
191 CATTTT-TATGGCTTGTAAATTCATACAATGGT-CCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * *
5648503 AGACGAC-CTGTTTTCTATTTTTCACGATTTTCGAAACTTTTTATGGTTCATGATTTTTTAAAAT
254 AGACGACTC-GTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAAT
* * * *
5648567 TTTTTTGAAAGGAGTTCTGG-CCCAAACCTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
318 TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
* *
5648631 TAAAAAAATTTAGCTAAAAACTCGAAGTGTATAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
383 CAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
5648696 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
448 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * **
5648761 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATGTAAGGGCCAAGTACTAGCACATATCG
513 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * *
5648826 CACACCATGTGCGCACACCCCCCAG-CCCCCTGATCACCGGAACCCCAATGCCGCCGGTCAGGTT
578 CACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * *
5648890 CTCCGGTGATGCTCCGGCGAAT--TACCCCGACGAAGAAAAATACGGCACCAACACGTGCCCAAG
643 CTCCGGTGATGCTCCGACG-ATGGT-GCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAG
* *
5648953 CCCAGCATGTGCTGCCGCAACCCTCAGTCTGATCCGATCTTAGACT-GGAATGAA-----T-T-C
706 CCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
* *
5649010 GT--A-T-GG---G----CC---T---TAAGTCAACCCAGGAAACGAGCGCTGCGGGCGCTCAGT
771 TTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG-TGCGGGCGCTCAG-
* * * ** *
5649058 CCGGCCCAGAAGGGCGGGATTGCACAAATCGGGGATTGATCGCGGTCCCCCCTCTGTGTGCTGCC
834 CCGG-CCAGAAGGGCGGGA-TGCACAAGTCGGGGATCGGTCG-GGT-CCCCCTCTGCATGCT-AC
5649123 CAATCC
894 CAATCC
* * * * * * *
5649129 TGCTGCCGCTACCCTCGG-CCGATCTGATCTTAGAATGGGAATTAACTCCGTATGGCTAAGCCAA
1 TGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
5649193 CTGACGAAACT-AGCCGGGCGGGCGGGCGGGGGCGGGCAGGCACTACGCCGGCCAGAGCGACGGG
66 CTGACGAAA-TGAG-C--GTGGG-GGGC--GGGC--G--GGCACTACGCCGGCCAGAGAGACGGG
* ** * * * *
5649257 ATGCG-TAG-CAAGGAGTCGTTATA-GGTGGTAAGTGGATTGAGGCACATCTTCATATTTCTGCA
120 ATGCGCAAGCCGTGGA-TCG--ATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACA
*
5649319 TAGCCAATGCCATTTTTA-GCGCTTGTAAATTCATACAATGGTCCCTTAAGCCTCCACGTGAAGT
182 T-GCCAATGCCATTTTTATG-GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
*
5649383 TTCATGGCAAGACCGACTTCATTTTCTATTTTTCACGA-TTTTGAAAACTTTTTACGGTTC-GAG
245 TTCATGGCAAGA-CGAC-TCGTTTTCTATTTTTCACGATTTTTG-AAACTTTTTACGGTTCAG-G
* * * * * *
5649446 ATTTTTTAAAATTTTTTTGGAAAGCGTTTTGGCCCCAAACGTGGTAGACGTCATCCTTTTATTTT
306 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* * * * * *
5649511 TTTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAACTATACAACATTTTGTGACCATTTGAA
371 TGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
*
5649576 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCT
436 AAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCT
5649641 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
501 CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * **
5649706 CAGCACTCATCGCACATCATGTGCGCACACCCCGCCCTCGGCCCCCTCGATCGTTGGAACCCCAA
566 CAGCACCCATCGCACATCATGTGCGCACA--CC-CCC-CGGCCCCCCCGATCGCCGGAACCCCAA
* ** * * *
5649771 TGCCGCCAGTCAGGTTCTCCAATGATGCTCCGACGATGGTGTCTCGATGAAGAAAAATACGGCTC
627 TGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTG-CCCGACGAAGAAAAATACGGCAC
* * * * * *
5649836 CAGCATATGCCCAAGCCCAGCATGTGATGCCGCAACCCTCGATCCGGTCCGATCTTACACTGGGA
691 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGA
* ** *
5649901 ATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACAAACAAAACGAGCG
756 ATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCG
* * * * * * *
5649966 TACAGTCGCTCAACCGGCCAGAAGGGCAGGATGCACAAGCCGGGGATCGGTCGAGT--CCC-C--
821 TGCGGGCGCTCAGCCGGCCAGAAGGGCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTG
5650026 C-T-CTA-C-A---
886 CATGCTACCAATCC
* * *
5650033 TGCTACCGCAACCCTCGACTCT--TCTGATCTTAGACTGGGAATGAACTCCGTATGCATAAGCCA
1 TGCTACCGCAACCCTCG-GTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
5650096 ACTGACGAAACGAGCGGGAGGGTGGACGGACGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
65 ACTGACGAAATGAGCGTG-GGG-GG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
5650161 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCAAATGCC
127 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
* * * **
5650226 ATTTTTATGGCTCGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTAATGGTGAGA
192 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * *
5650291 TGACTCGTTTTCTATTTTTCATGA-TTTTCAAAGCTTTTTGCGATTCAGGATTTTTTTAAATTTT
257 CGACTCGTTTTCTATTTTTCACGATTTTTGAAA-CTTTTTACGGTTCAGGATTTTTTAAAATTTT
* * *
5650355 TTCGGTAGGAGTTTCGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAA
321 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * *
5650420 AAAAAGTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGCAAAAAGTGTCCCCATT
386 AAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
5650485 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
451 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
5650550 AGTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACAC
516 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
5650615 ATCATGTGCGCACACCCCCCGACCCCCCCGATCGCCGGAACCCCAATGCCGCTGGTCAGGTTCTG
581 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
** * * * * ** *
5650680 CGACGATGCTTCGGCGATGGTG-CTGAAGAAGAAAAATGTGGCACCAGCACATGCCCGGGCCCAG
646 CGGTGATGCTCCGACGATGGTGCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAG
* *
5650744 CATGGGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
711 CATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * * * * *
5650809 TTGAGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATACGGGCGCTCAGTCGGCCA
776 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCA
* * * *
5650874 GAGGGGCGGGATGCGCAAG-CTGGGGATCGGTCGGGTCCCCCTCTGCGTGCTACCGATCC
841 GAAGGGCGGGATGCACAAGTC-GGGGATCGGTCGGGTCCCCCTCTGCATGCTACCAATCC
* * * * * *
5650933 TGCTACTGCAACCCTTGGTCTGGTCCGATCTTAAACTGGGAATGCACTCCATATGCCTAAGCCAA
1 TGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
5650998 -TCGACGAAATGAGC-TGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
66 CT-GACGAAATGAGCGTGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
5651061 CATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTGCATATTTCTACATGCCAATGCCATT
130 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATT
* *
5651126 TTTATGGCCTGTAGATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
195 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* ** *
5651191 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACAGTTTGGGATTTTTTGAAATTTTTTCG
260 CTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCG
* * * * *
5651256 GAAGGAGTTTTGGCCCCAAATTTGCTGGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
325 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
5651321 ATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA-CATTTTAAAAAAGTGTCCCCATTTCAA
390 ATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
5651385 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTT
455 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* *
5651450 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCACACATCA
520 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* ** * **
5651515 TGTGCGCACACCCCCCGGCCCCCCTGATCATCGGAACCCTAATGCCATCGGTCAGGTTCTCCGGT
585 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGT
* *
5651580 GATGCTCCGACGATGGTGCCCCGAAGAAGAAAAATAAGGCACCAGCACATGCCCGAGCCCAGCAT
650 GATGCTCCGACGATGGTG-CCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCAT
* * * *
5651645 GTGCTGCCACAACCCTGGGTCTGGTCTGATCTTAGACTGGGAATCAACTCCGTATGCTTAGACTG
714 GTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTG
* * * *
5651710 GGAATGAGCTCCGTATGCCTAAGTCAACCCCACGAAACGAGCGTGCGGCCGCTCAACCGACCA-A
779 GGAATGAACTCCGTATGCCTAAGTCAA-CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
** *
5651774 AGGGCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTTTCGATCC
843 AGGGCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCAATCC
** * * * *
5651831 TGCTGTCGCAACCCTTGGT-TCGATCTGATCTTAGATTGGGAATGAACTCTGTATGCCTAAGCCA
1 TGCTACCGCAACCCTCGGTCT-GATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
5651895 A-TCGACGAAACGAGC-AGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGAATGCGCAAG
65 ACT-GACGAAATGAGCGTGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * ** *
5651958 CCTTGGATCGATAGAGTGGTAGGTGGGTTTAGGCACCTCTTCATATTTCTATGTGCGAATGCCAT
129 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
* * * *
5652023 TTCTATGGCTTGTGAATTCATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGATG
194 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * *
5652088 ACTCGTTTTCTATTTTTTAGGATTTTTGAAACTTTTTATGGTTCCGGATTTTTTAAAATTTTTTC
259 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTC
* * * * * *
5652153 AGAAGGAGATTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTCTGGTGGCATGCACAAACA
324 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
5652218 AATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
389 AATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
5652283 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
454 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* ** *
5652348 TCTCGAGGTTTGATAAGGGATAGTTGGCCAATATAAGGGCCAAGCACCAGCACCCATCGCACATC
519 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * *
5652413 ATGTGCGCACACCCCCC--CGCCCCC--T---CGAAACCCCAATGCCGCCGGTTAGGTTCTCCGG
584 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG
* * * *
5652471 TGATGCTTCGATGATGGTGCCCCGACGAAGAAAAATACGGCACCAGTACATGCTCGAGCCCAGCA
649 TGATGCTCCGACGATGGTG-CCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCA
* * *
5652536 TGTGCTGCCGCAACACTTGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
713 TGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT
* * *
5652601 GGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGAGCTCAGCCGGCTAGA
778 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGA
* * *** * *** * ** * * *
5652666 GGGGCGAGATGTGGAAGCCAACGATTGACCAGGTCCCCCTCTGCGTGCTGCCAATCC
843 AGGGCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCAATCC
* * * * * * * *
5652723 TGCTTCCACAACCCTCAGTCCGGTCTGATCTTAGACT-GGAATGAACTCCGTATGGCTAAGTCAA
1 TGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
5652787 C
66 C
5652788 CCATGAAACG
Statistics
Matches: 3950, Mismatches: 470, Indels: 240
0.85 0.10 0.05
Matches are distributed among these distances:
876 20 0.01
877 12 0.00
878 3 0.00
879 30 0.01
880 3 0.00
881 65 0.02
882 28 0.01
883 2 0.00
884 6 0.00
886 5 0.00
887 6 0.00
888 244 0.06
889 51 0.01
890 121 0.03
891 152 0.04
892 491 0.12
893 5 0.00
894 305 0.08
895 11 0.00
896 294 0.07
897 423 0.11
898 742 0.19
899 414 0.10
900 94 0.02
901 103 0.03
902 14 0.00
903 156 0.04
904 65 0.02
905 1 0.00
906 3 0.00
907 1 0.00
908 2 0.00
909 1 0.00
910 4 0.00
911 1 0.00
913 1 0.00
914 1 0.00
915 3 0.00
917 1 0.00
918 2 0.00
919 18 0.00
920 14 0.00
921 4 0.00
922 9 0.00
923 19 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
TGCTACCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CTGACGAAATGAGCGTGGGGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCGG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTG
ATGCTCCGACGATGGTGCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGG
AATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAAGG
GCGGGATGCACAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCAATCC
Found at i:5651711 original size:26 final size:26
Alignment explanation
Indices: 5651675--5651727 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5651665 CTGGTCTGAT
5651675 CTTAGACTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
* *
5651701 CTTAGACTGGGAATGAGCTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
5651727 C
1 C
5651728 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.23, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:5652603 original size:26 final size:26
Alignment explanation
Indices: 5652567--5652619 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
5652557 CTGGTCTGAT
5652567 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5652593 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5652619 C
1 C
5652620 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5652957 original size:158 final size:158
Alignment explanation
Indices: 5652593--5652945 Score: 449
Period size: 158 Copynumber: 2.2 Consensus size: 158
5652583 ACTCCGTATG
5652593 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGAGCTCAGC
1 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGAGCTCAGC
*** * * *
5652658 CGGCTAGAGGGGCGAGATGTGGAAGCCAACGATTGACCAGGTCCCCCTCTGCGTGCTGCCAATCC
65 CGGCTAGAGGGGCGAGATGCACAAGCCAACGATCGACCAGGTACCCCTCTACGTGCTGCCAATCC
* * *
5652723 TGCTTCCACAACCCTCAGTCCGGTCTGAT
130 TACTACCACAACCCTCAGTCCGATCTGAT
* * *
5652752 CTTAGACTGGAATGAACTCCGTATGGCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTTAGCC
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGAGCTCAGCC
*** ** * **
5652817 GGTCT-GAGGGGCTG-GATGCACAAGCCGGGGATCGACCTTGTACCCCTCTATGTGCTGCTGATC
66 GG-CTAGAGGGGC-GAGATGCACAAGCCAACGATCGACCAGGTACCCCTCTACGTGCTGCCAATC
* *
5652880 CTACTACCATAACCCTCGGTCCGATCTGAT
129 CTACTACCACAACCCTCAGTCCGATCTGAT
* *
5652910 CTTAGACTGGAATGAACTCCATATGCCTAAGCCAAC
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAAC
5652946 TGACGAAACG
Statistics
Matches: 167, Mismatches: 25, Indels: 5
0.85 0.13 0.03
Matches are distributed among these distances:
158 156 0.93
159 11 0.07
ACGTcount: A:0.23, C:0.29, G:0.26, T:0.21
Consensus pattern (158 bp):
CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGAGCTCAGCC
GGCTAGAGGGGCGAGATGCACAAGCCAACGATCGACCAGGTACCCCTCTACGTGCTGCCAATCCT
ACTACCACAACCCTCAGTCCGATCTGAT
Found at i:5653661 original size:26 final size:26
Alignment explanation
Indices: 5653625--5653677 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
5653615 CTGGTCTGAT
5653625 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5653651 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5653677 C
1 C
5653678 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5653952 original size:158 final size:158
Alignment explanation
Indices: 5653651--5654015 Score: 489
Period size: 158 Copynumber: 2.3 Consensus size: 158
5653641 ACTCCGTATG
*
5653651 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGT
** ** * * *
5653716 CGGCTTGAGGGGCGAGATGTGCAAGCCAGCGACTGACCAGGTCCCCCTCTGCGTGCTGCCAATCC
65 CGGCCAGAGGGGCGAGATGCACAAGCCAGCGACTGACCAGGTACCCCTCTACGTGCTACCAATCC
* * *
5653781 TGCTTCCACAACCCTCAGTCCGGTCTGAT
130 TACTGCCACAACCCTCAGTCCGATCTGAT
5653810 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGTC
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGTC
* ** * ** *
5653875 GGCCAGAGGGGCGGGATGCACAAGCTGGGGA-TCGACCTTGTACCCCTCTACGTGCTACCGATCC
66 GGCCAGAGGGGCGAGATGCACAAGCCAGCGACT-GACCAGGTACCCCTCTACGTGCTACCAATCC
* *
5653939 TACTGCCATAACCCTCGGTCCGATCTGAT
130 TACTGCCACAACCCTCAGTCCGATCTGAT
* * * *
5653968 CTTAGACTGGAATGAACTCCATATGCCTAAGACAACCGACGAAACGAG
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAG
5654016 AGGACGAGCT
Statistics
Matches: 181, Mismatches: 24, Indels: 3
0.87 0.12 0.01
Matches are distributed among these distances:
157 1 0.01
158 172 0.95
159 8 0.04
ACGTcount: A:0.24, C:0.30, G:0.26, T:0.20
Consensus pattern (158 bp):
CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGTC
GGCCAGAGGGGCGAGATGCACAAGCCAGCGACTGACCAGGTACCCCTCTACGTGCTACCAATCCT
ACTGCCACAACCCTCAGTCCGATCTGAT
Found at i:5654724 original size:26 final size:26
Alignment explanation
Indices: 5654688--5654740 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
5654678 CCAGTTCGAT
5654688 CTTAGACTGGGAATGAAC-TCTGTATG
1 CTTAGACTGGGAATGAACGTC-GTATG
5654714 CTTAGACTGGGAATGAACGTCGTATG
1 CTTAGACTGGGAATGAACGTCGTATG
5654740 C
1 C
5654741 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.17, G:0.28, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACGTCGTATG
Found at i:5655614 original size:26 final size:26
Alignment explanation
Indices: 5655575--5655627 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5655565 CCTGGCCGAT
*
5655575 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
5655601 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
5655627 C
1 C
5655628 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:5656066 original size:901 final size:899
Alignment explanation
Indices: 5653810--5657571 Score: 4845
Period size: 901 Copynumber: 4.2 Consensus size: 899
5653800 CCGGTCTGAT
* *
5653810 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* ** ** * * *
5653874 CGGCCAGAGGGGCGGGATGCACAAGCTGGGGATCGACCTTGTACCCCTCTACGTGCTACCGATCC
66 CGGCCAGA-GGGCGGGATGCGCAAG-TGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATCC
* * *
5653939 TACTGCCATAACCCTCGGTC-CGATCTGATCTTAGACTGGAATGAACTCCATATGCCTAAGACAA
129 TGCTGCCACAACCCTCGGTCTCGATCTGATCTTAGACTGGAATGAACTCCATATGCCTAAGCCAA
* * * * * * *
5654003 CCGACGAAACGAGAGGACGAGCTGGCAGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGTAA
194 CCGACGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
5654068 GCCGTGGATAGATAGGGTGGTAGGTGGGTTTCGGCATATCTTCATATTTCTGCATGCCAATGCCA
259 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
* *
5654133 TTTTTGTGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
324 TTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
5654198 GACTCGTTTTCTTTTTTTCAGGATTTTTGAAACTTCTTGCGGTTTGAGATTTTTTAAAATTTTTT
389 GACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTT
* * *
5654263 CAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTCATCCTTGTATTTTTGTTGGCATGCACAAAA
454 CGGAAGGAGTTTTGGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
5654328 ATATTCAGCTAAAAACTCAAACTGTACAACATTTTGTGACCATTTGAAAAATGTGTCCCCATTTC
519 AAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
5654393 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAACATCTCAAATGCTCTTTAA-GGGGTGGTGA
584 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT-GTGA
* *
5654457 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAACGGCCAAGTACCAGCACCCATCGCACA
648 GTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
5654522 TCATGTGCGCACACCCTGCCCTCGGCCCCCCCGATCGTTGGAACCCCAATGCCGC-CCGTCAGGT
713 TCATGTGCGCACACCC--CCC-CGACCCCCCCGATCGTCGGAACCCCAATGCCGCTCGGTCAGGT
* * * * *
5654586 TCTCCAACGATGCTCCGGTGATGGTGCTCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGC
775 TCTCCGACGATG-TTC-GCGATGGTGC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * **
5654651 CCAGCATGTGCTGCCGCAACCCTCGATCCAGTTCGATCTTAGACTGGGAATGAACTCTGTATG
837 CCAGCATGTGCTGCCGCAACCCTCGGTCCTGGCCGATCTTAGACTGGGAATGAACTCTGTATG
* * *
5654714 CTTAGACTGGGAATGAACGT-CGTATGCCTAAGTCAACCCACAAAACGAGCGTACGGTCGCTCAA
1 CTTAGACTGGGAATGAAC-TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG
* *
5654778 CCGGCCAGAAGGGCGGGATGCACAAGTCGGGGATCGGCCGGGT---CC-C--CAT-CTA-C-A--
65 CCGGCCAG-AGGGCGGGATGCGCAAGT-GGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATC
* * *
5654832 -TGCTGCCGCAACCCTC-G-CT-GTTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
128 CTGCTGCCACAACCCTCGGTCTCGATCTGATCTTAGACT-GGAATGAACTCCATATGCCTAAGCC
* ** * *
5654893 AACTGACGAAACGAGCGGGA-GGGTAGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
192 AACCGACGAAACGAGC-GGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * *
5654957 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCAAATG
256 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATG
* **
5655022 CCATTTTTATGG-CTCGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGTG
321 CCATTTTTATGGCCT-GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * * * ** *
5655086 AGATGACTCATTTTCTATTTTTCATGA-TTTTCAAAGCTTTTTGCGATTCAGGATTTTTTTAAAT
385 AGACGACTCGTTTTCTATTTTTCAGGATTTTTGAAA-CTTTTTACGGTTTGGGATTTTTTAAAAT
** *
5655150 TTTTTC-GACAGGAGTTTCAGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTTGTTGGCTTGC
449 TTTTTCGGA-AGGAGTTTTGGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * **
5655214 AAAAAAAAAGTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGCATCCC
513 ACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
5655279 CATTTC-GAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
578 CATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* *
5655343 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACCCAT
642 GTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* * *
5655408 CACACATCATGTGCGCACA-CCCCCCGACCCCCCCGATCGCCGGAACCCCAATACCGCT-GGTCA
707 CGCACATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCTCGGTCA
* * * *
5655471 GGTTCTCTGACGATGCTTCAGCGATGGTGCCGAAGAAGAAAAATGTGGCACCAGCACATGCCCGG
772 GGTTCTCCGACGATG-TTC-GCGATGGTGCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* *
5655536 GCCCAGCATATGCTGCCGCAACCCTCGGTCCTGGCCGATCTTAGACTGGGAATGAACTCCGTATG
835 GCCCAGCATGTGCTGCCGCAACCCTCGGTCCTGGCCGATCTTAGACTGGGAATGAACTCTGTATG
* * * *
5655601 CTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCATACGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
*
5655666 CGGCCAGAGGGTCGGGATGCGCAAGATGGGGATCGGTTGGGTCCCCCTCTGCATGCTACCGATCC
66 CGGCCAGAGGG-CGGGATGCGCAAG-TGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATCC
* * * *
5655731 TGCTGCTACAACTCTCGGTCTAG-TCCGATCTTAGACTGAGAATGAACTCCATATGCCTAAGCCA
129 TGCTGCCACAACCCTCGGTCTCGATCTGATCTTAGACTG-GAATGAACTCCATATGCCTAAGCCA
* * * *
5655795 ATCGACGAAATGAGCGGGCGGGCGGGCGGGTGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
193 ACCGACGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
5655860 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTCCATATTTCTACATGCCAATGCC
258 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
5655925 ATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
323 ATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
5655990 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACAGTTTGGGATTTTTTGAAATTTTT
388 CGACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTT
* * *
5656055 TCGGAAGGAGTTTTGGCCCCAAACTTGCTG-GACATGATCCTTGTATTTTTTTTGGCATGCACAA
453 TCGGAAGGAGTTTTGGCCCCAAACTTG-GGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
5656119 AAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
517 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
5656184 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTG
582 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
5656249 AGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCAC
647 AGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
5656314 ATCATGTGCGCACA-CCCCCCGACCCCCCCGATCATCGGAACCCTAATGCC-ATCGGTCAGGTTC
712 ATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCTCGGTCAGGTTC
** * *
5656377 TCCGGTGATGATCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGTC
777 TCCGACGATG-TTCG-CGATGGTG--CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
*
5656442 CAGCATGTGCTGCCACAA----C---CCTGG--G--C-----CT--G---G---TCTG-AT-
838 CAGCATGTGCTGCCGCAACCCTCGGTCCTGGCCGATCTTAGACTGGGAATGAACTCTGTATG
* *
5656478 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCCACGAAACGAGCGTGCGGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CCCACGAAACGAGCGTACGGGCGCTCAG
* * * ***
5656543 CCGGCCAAAGGGCGAGATGTGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGCATGCTTTTGATCC
65 CCGGCCAGAGGGCGGGATGCGCAAGT-GGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATCC
** * * *
5656608 TGCTATCATAACCCTTGGTC-CGATCTGATCTTAGACTGGGAATGAACTCCATACGCCTAAGCCA
129 TGCTGCCACAACCCTCGGTCTCGATCTGATCTTAGACT-GGAATGAACTCCATATGCCTAAGCCA
* * *
5656672 ACCGACGAAACGAGC--A--GACGGGCGAGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCA
193 ACCGACGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
** ** *
5656733 AGCTTTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCGAATGCC
258 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
* * *
5656798 ATTTCTATGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
323 ATTTTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
5656863 TGACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTATGGTTCT-GGATTTTTTAAAATTTT
388 CGACTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTT-TGGGATTTTTTAAAATTTT
* * * *
5656927 TTCGGAAGGAGATTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCACGCACAA
452 TTCGGAAGGAGTTTTGGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* *
5656992 ACAAATTTAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
517 AAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
5657057 TCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTG
582 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
**
5657122 AGTTCTCGAGGTTTGATAAGGGATAGTTGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
647 AGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
** *
5657187 ATCATGTGCGCACACCCCCCCG-CCCCCTTGATCGTCGGAACCCCAATGCCG-TCGGTTAGGTTC
712 ATCATGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCTCGGTCAGGTTC
* * ** * *
5657250 T----C--TG---GTGATGCT-CCGACGAAGAAAAATATGGCACCAGTACATGCTCGAGCCCAGC
777 TCCGACGATGTTCGCGATGGTGCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
5657305 ATGTGCTGTCGCAACCCTTGGT-CTAGTCTGATCTTAGACTGGGAATGAACTCTGTATG
842 ATGTGCTGCCGCAACCCTCGGTCCT-GGCCGATCTTAGACTGGGAATGAACTCTGTATG
* *
5657363 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTGAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
* * ** * * ** * * * *
5657428 CGGCTAGAGGGGCGAGATGCGCAAGCCAGCGATTGACCAGGTCCCCCTCTGCGTGCTGCCAATCC
66 CGGCCAGA-GGGCGGGATGCGCAAG-TGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATCC
* * * * *
5657493 TGCTTCCACAACCCAT-AGTCT-GGTCTGATCTTAGACTGGAATGAACTCCGTATGCCTAAGTCA
129 TGCTGCCACAACCC-TCGGTCTCGATCTGATCTTAGACTGGAATGAACTCCATATGCCTAAGCCA
* *
5657556 ACCCATGAAACGAGCG
193 ACCGACGAAACGAGCG
5657572 TGCAGGCGCT
Statistics
Matches: 2515, Mismatches: 261, Indels: 183
0.85 0.09 0.06
Matches are distributed among these distances:
859 50 0.02
862 5 0.00
863 1 0.00
865 2 0.00
866 1 0.00
867 2 0.00
868 1 0.00
870 1 0.00
873 513 0.20
874 8 0.00
875 2 0.00
876 2 0.00
877 144 0.06
878 38 0.02
879 3 0.00
880 1 0.00
882 1 0.00
883 4 0.00
884 72 0.03
885 107 0.04
886 6 0.00
887 180 0.07
888 59 0.02
889 3 0.00
890 2 0.00
891 30 0.01
892 487 0.19
893 24 0.01
894 4 0.00
895 1 0.00
896 7 0.00
897 1 0.00
898 3 0.00
899 16 0.01
900 6 0.00
901 566 0.23
902 16 0.01
903 51 0.02
904 9 0.00
905 84 0.03
906 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (899 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
CGGCCAGAGGGCGGGATGCGCAAGTGGGGATCGGTCGGGTCCCCCTCTGCATGCTACCGATCCTG
CTGCCACAACCCTCGGTCTCGATCTGATCTTAGACTGGAATGAACTCCATATGCCTAAGCCAACC
GACGAAACGAGCGGACGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATT
TTTATGGCCTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCGTTTTCTATTTTTCAGGATTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCG
GAAGGAGTTTTGGCCCCAAACTTGGGAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCCCGACCCCCCCGATCGTCGGAACCCCAATGCCGCTCGGTCAGGTTCTCCG
ACGATGTTCGCGATGGTGCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
GCTGCCGCAACCCTCGGTCCTGGCCGATCTTAGACTGGGAATGAACTCTGTATG
Found at i:5657366 original size:26 final size:26
Alignment explanation
Indices: 5657337--5657389 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5657327 CTAGTCTGAT
*
5657337 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5657363 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5657389 C
1 C
5657390 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5657664 original size:158 final size:158
Alignment explanation
Indices: 5657363--5657727 Score: 507
Period size: 158 Copynumber: 2.3 Consensus size: 158
5657353 ACTCTGTATG
* *
5657363 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTGAGC
1 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGC
* * * * *
5657428 CGGCTAGAGGGGCGAGATGCGCAAGCCAGCGATTGACCAGGTCCCCCTCTGCGTGCTGCCAATCC
65 CGGCCAGAGGGGCGAGATGCACAAGCCAGCGATCGACCAGGTACCCCTCTACGTGCTGCCAATCC
* *
5657493 TGCTTCCACAACCCAT-AGTCTGGTCTGAT
130 TACTGCCACAACCC-TCAGTCTGGTCTGAT
* *
5657522 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCAGGCGCTCAGTC
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCC
* * * ** *
5657587 GGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGACCTTGTACCCCTCTACGTGCTGCCGATCCT
66 GGCCAGAGGGGCGAGATGCACAAGCCAGCGATCGACCAGGTACCCCTCTACGTGCTGCCAATCCT
* *
5657652 ACTGCCATAACCCTCGGTCTGGTCTGAT
131 ACTGCCACAACCCTCAGTCTGGTCTGAT
* * *
5657680 CTTAGACTGGAATGAACTCCGTATACCTAAGCCAACCGACGAAACGAG
1 CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
5657728 AGGGCGAGCT
Statistics
Matches: 182, Mismatches: 23, Indels: 3
0.88 0.11 0.01
Matches are distributed among these distances:
157 1 0.01
158 173 0.95
159 8 0.04
ACGTcount: A:0.24, C:0.30, G:0.27, T:0.19
Consensus pattern (158 bp):
CTTAGACTGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCC
GGCCAGAGGGGCGAGATGCACAAGCCAGCGATCGACCAGGTACCCCTCTACGTGCTGCCAATCCT
ACTGCCACAACCCTCAGTCTGGTCTGAT
Found at i:5659957 original size:26 final size:26
Alignment explanation
Indices: 5659919--5659971 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5659909 CCAGTCCATT
*
5659919 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
5659945 CTTAGACTTGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5659971 C
1 C
5659972 CTGAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5662583 original size:900 final size:894
Alignment explanation
Indices: 5659609--5664389 Score: 6120
Period size: 878 Copynumber: 5.4 Consensus size: 894
5659599 GGCATGCACA
* *
5659609 AAAAAAGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAACCTGTAAAATATCAAATG
1 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* *
5659674 CTCTTTAATGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
66 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * * * *
5659739 ACCAGCACCCATCGCACATCATGTGTGCACACCCCCCGGCCCCCCGATCTTAGGAACCCTAATGC
131 ACCAGCACCCATCGCACATCATGTGCGCACCCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGC
* * * *
5659804 CGCCGGTCAGGTTCTCTGACGATGCTCCGGCGATGGTGCCTCGGTGAAGAAAAATGTGGCACCAG
196 CGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
* * * * *
5659869 TACATGCCCGAGCCCAGTATGTGCTACCGTAACCCTCGGTC-CAGTCC-ATTCTTAGACTGGGAA
261 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGA-TCCGA-TCTTAGACTGGGAA
* *
5659932 TGAACTCCGTATGCTTAGACTTGGAATGAACTCCATATGCCTGAGTCAACCCACGAATCGAGCGT
324 TGAACTCCGTATGCTTAGAC-TGGAATGAACT-CATATGCCTAAGTCAACCCACGAAACGAGCGT
* * * * * * *
5659997 GCAGGCGCTCAGCCGGTCAGAGGGGCGGGATGCGTAAGTCGAGGATCGATCGTGTCCCCCTCTGT
387 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG-GTCCCCCTCTGC
* * * * * * *
5660062 GTGCTACCGATCCTGCTATCGCAACCCTCGGTTCGAT-TCAATCTTAGACTGGAAATGAACTCTG
451 GTGCTACCGATCTTACTACCGCAACCCTCGGTTCGCTCT-GATCTTAGACTGGGAATGAACTCCG
* * *
5660126 TATGCCTAAGCCAACCGACGAAACGAGCTGGCGGGTGTGCGGGCGGGCACTAAGCCGGCCAGAGA
515 TATGCCTAAGCCAACCGACGAAACGAGC-GG-GCG-G-GCGGGCGGGCACTACGTCGGCCAGAGA
* ** ** *
5660191 GACGGGATGCGAAAGCCGTGGATCGATAGGGTGACAGGTGGGTTTACTCACATCTTCATATTGCT
576 GACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT
* * *
5660256 GAGTGCCAATGCCATTTTTATGGCTTGTAAATTAATACAGTGGTCCCTTAAGCCTTCACGTGAAG
641 TA-TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAG
* * * *
5660321 TTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTACGGTT-TGGGAT
705 TTTCATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCT-GGAT
* * **
5660385 TTTTTAAAATTTTTTTGGAAGGAATTTTGGTGCCAAACTTGGTAGACGTGATCCTTGTATTTTT-
769 TTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* * *
5660449 TATGGCATGCACAAAAACATTCAGCTAAAAATTCGAAGTGTACAAGATTTTGTTACCATTTG
834 T-TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
5660511 AAAAAAGTGTCCCCGTTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
1 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
5660576 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
66 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
5660641 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCTGATCGCCGGAACCCTAAT
131 ACCAGCACCCATCGCACATCATGTGCGCAC-CCCCCCCGGCCCCCC-GATCGTCGGAACCCCAAT
* * * * * * *
5660706 GCTGTCGGTCAGGTTCTCTGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATACGGTACC
194 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACC
* * *
5660771 AGCACATGCCCGAGGCTAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAA
259 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAA
*
5660836 TGAACTCC----G--T--A-T-G--T---CT-A-A-G-C-----CAACCCACGAAACAAGCGTGC
324 TGAACTCCGTATGCTTAGACTGGAATGAACTCATATGCCTAAGTCAACCCACGAAACGAGCGTGC
* * * * * *
5660877 GGGTGTTCAGCCGGGCAGAGGGACGGGATGCGCAAGCCGGGGATCGGCCAGGTCCCCCTCTACGT
389 GGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC-GGTCCCCCTCTGCGT
* * * * * * *
5660942 GCTACCAATCTTACTGCCGCAACCCTTGGTTCACTCCGATCTTAGACTAGGAATGAACTCCGTGT
453 GCTACCGATCTTACTACCGCAACCCTCGGTTCGCTCTGATCTTAGACTGGGAATGAACTCCGTAT
* * ** * *
5661007 GCCTAAGCCAATCGACGAAAGGAGCGGGTAGGCGGGCAGGTAGGCACTACGTCGGTCAGAAAGAC
518 GCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC--G--GGCACTACGTCGGCCAGAGAGAC
* * *
5661072 GGGATGCGCAATCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTG
579 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-TA
* **
5661137 TGCCGATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAATTCTTCACGTGAAGTTT
643 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* **
5661202 CATGGCAAGACGACTCATTTTCTATTGTTCACGATTTTCAAAACTTTTTACGGTT-TAGGATTTT
708 CATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCT-GGATTTT
*
5661266 TGAAAA-TTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
772 TGAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
* *
5661330 GCATGCACAAAAAAAGTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTG
837 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
**
5661388 AAAAAAGCATCCCCATTTC-GAACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
1 AAAAAAGTGTCCCCATTTCAG-ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
* * **
5661452 GCTCTTTAAGGGGGTGTGATTTCTCGAGGTTTGATAAGGGATAGTTGGCCAATATAAGGGCCAAG
65 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
** *
5661517 TACCAGCACCCATCTTACATCATGTGCGCA-CACCCCCGGCCCCCTCGATCGTCGGAACCCCAAT
130 TACCAGCACCCATCGCACATCATGTGCGCACCCCCCCCGGCCCCC-CGATCGTCGGAACCCCAAT
* * * * * * * * *
5661581 GCTGGCGGTCAGGTTCTCTGGCGATGCTCTGGCGATGGTGCCCTGGTGAAGAAAAATGTGGCATC
194 GCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACC
* * * *
5661646 AGCACATGCCTGAGCACAGCATATGCTGCCACAACCCTCGGTCTGATCCGATCTTAGACTGGGAA
259 AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAA
** *
5661711 TGAACTCCGTATGCTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAACCCACGAAACGAGTGT
324 TGAACTCCGTATGCTTAGACT-GGAATGAAC-TCATATGCCTAAGTCAACCCACGAAACGAGCGT
* * * ** *
5661776 ACGGGCGCTCAACCGGCCAGAGGGGCGGGACGCGCAAGCCAAGGATCGACCGTGTCCCCCTCTGT
387 GCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG-GTCCCCCTCTGC
* * * *
5661841 GTGCTACCGATCTTGCTACCGTAACCCTCGG-TCTGGTCTAATCTTAGACTGGGAATGAACTCCG
451 GTGCTACCGATCTTACTACCGCAACCCTCGGTTC-GCTCTGATCTTAGACTGGGAATGAACTCCG
** *
5661905 TATGCCTAAGCCAACCGACGAATTGAACGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACG
515 TATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACG
*
5661970 AGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTCAT
580 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTT-AT
* *
5662035 GCCAATGCCATTTTTATGGCTTGTAAATTCAAACAATGGTCTCTTAAGCCTTCACGTGAAGTTTC
644 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * * * *
5662100 ATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTGAATCTTTTTACAGTTCTTGATTTGTG
709 ATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCTGGATTTTTG
* **** *
5662165 AAAATTTTTTTAGAAATCCTTTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTG
774 AAAATTTTTTT-GGAA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
5662230 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
837 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * *
5662288 AAAAAAGTGAT-CGCATTTCCGAAACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
1 AAAAAAGTG-TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAAT
5662352 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGGCCAAG
65 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* *
5662416 TACCAGCACCCATTGCACAT-ATTGTGGGCACGCCCCCCCGGCCCCCCGATCGTCGGAACCCCAA
130 TACCAGCACCCATCGCACATCA-TGTGCGCAC-CCCCCCCGGCCCCCCGATCGTCGGAACCCCAA
** * * *
5662480 TGCCGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCAACGAAGAAAAATACGGCAC
193 TGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCAC
* *
5662545 CAGCACATGCCCGAGCCCAGCATGTGCTGCTGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGA
258 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGA
* *
5662610 ATGAACTCC--A----T--A-T-G--T---CT-A-A-G-C-----CAACCCATGAAACAAGCGTG
323 ATGAACTCCGTATGCTTAGACTGGAATGAACTCATATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * *
5662651 CGGGTGTTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCTGGGGATCGGCTAGGT-CCCCTCTACA
388 CGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC-CGGTCCCCCTCTGCG
* * * *
5662715 TGCTGCCGATCTTACTACCGCAACCCTCAGTTCGCTCTGATCTTAGACTAGGAATGAACTCCGTG
452 TGCTACCGATCTTACTACCGCAACCCTCGGTTCGCTCTGATCTTAGACTGGGAATGAACTCCGTA
* * * * *
5662780 TGCCTAAGCCAATCGACGAAAGGAGCGGGCAGCCGGGCGGGCAGGCACTACGTCGGTCAAAGAGA
517 TGCCTAAGCCAACCGACGAAACGAGC-GG--G-CGGGCGGGCGGGCACTACGTCGGCCAGAGAGA
5662845 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAT
578 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCT-T
* *
5662910 GTGCCAACGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
642 ATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * *
5662975 TCATGGCAAGACGACTCATTTTCTATTGTTCACGATTTTTGAAACTTTTTATGCTTC-GAGATTT
707 TCATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCTG-GATTT
* *
5663039 TTGAAAA-TTTTTCGGAAAGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
771 TTGAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTT
5663103 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
836 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* *
5663162 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCAACTAGCAGCAAACCTGTAAAATCTCAAATG
1 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
* * *
5663227 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATA-GGGGCTAATATAAGGGCAAAGT
66 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* *
5663291 ACCAGCACCCATCGCACATCATGTGCGCACAACCCCCTCCCGGCCCCCCCGATCATCGAAACCCC
131 ACCAGCACCCATCGCACATCATGTGCG--C-ACCCCC-CCCGG-CCCCCCGATCGTCGGAACCCC
* * ** * * * * *
5663356 AATACCGCCGGTCAGGTTCTTCGGTGATGCTCCGACGATGGTACCCCGGTAAAGAAAAATGTGGC
191 AATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGC
* * * * * *
5663421 ACCAGCACATGCCCAAGCCCACCATGTGCTGCCACAACCCTCGGTCCGGTCTGATCTTAGACTGG
256 ACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGG
** * * *
5663486 GAATGAACTCTATATGCTTAGACTAGGAATGAACTCCATATGCCTAAGTCAACCCATGAAATGAA
321 GAATGAACTCCGTATGCTTAGACT-GGAATGAACT-CATATGCCTAAGTCAACCCACGAAACGAG
*
5663551 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGACCGGGTCCCCCTC
384 CGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACC-GGTCCCCCTC
* * * * * * * * * * *
5663616 TGCATGTTGCCAATCCTACTGCTGCAACCCTTGATCCGGTCTGATCTTAGACTGGGAATGAACTC
448 TGCGTGCTACCGATCTTACTACCGCAACCCTCGGTTCGCTCTGATCTTAGACTGGGAATGAACTC
* *
5663681 CGTATGCCTAAGCCAACCGACGAAACGAACGGGCGGGCAGGCGGGCACTACGTCGGCCAGAGAGA
513 CGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGA
* * * * * *
5663746 CGGGATACGTAAGTCGTGGATCGATAGGGTGGTCGGTGGGTTTTGGCACATATTCATA----TT-
578 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTA
*
5663806 T--C--T-CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTTACGTGAAGTTT
643 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
*
5663866 CATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT
708 CATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCTGGA-TTTT
* *
5663931 TG-AAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTAG--GACATGATCCTTGTATTTTTGTTG
772 TGAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
*
5663993 GCATGCACAAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTG
837 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
* * * *
5664051 AAAAAAGTGTCCCCATTTTAGACATTTTAATTGCTACTGGCAACAAACCTGTAAAATCTCAAATG
1 AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
*
5664116 CTCTTTAAGGGGGTGTGGGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
66 CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
* * *
5664181 ACCAGCACCCATCACACATCATGTGCGCACACCCCCCCCGGCCCCCCAATC-TCCAGAACCCCAA
131 ACCAGCACCCATCGCACATCATGTGCG--CACCCCCCCCGGCCCCCCGATCGT-CGGAACCCCAA
** * * *
5664245 TGCTACCGGTCAGGTTCTCCGATGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATTCGGCAC
193 TGCCGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCAC
* ** * * * * *
5664310 CAACACATGCCCGAGCGTAGCATGTGCAGCTGCAACCCTCAGTCCGATCTGATCTTAGACTGGGA
258 CAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGA
*
5664375 ATGAACTTCGTATGC
323 ATGAACTCCGTATGC
5664390 CTAAGTCAAC
Statistics
Matches: 3393, Mismatches: 386, Indels: 215
0.85 0.10 0.05
Matches are distributed among these distances:
873 84 0.02
874 311 0.09
875 155 0.05
876 15 0.00
877 474 0.14
878 484 0.14
879 3 0.00
880 2 0.00
881 2 0.00
883 3 0.00
884 4 0.00
885 1 0.00
886 4 0.00
887 140 0.04
888 8 0.00
889 187 0.06
890 163 0.05
891 40 0.01
892 2 0.00
893 2 0.00
894 5 0.00
895 2 0.00
896 5 0.00
897 201 0.06
898 10 0.00
899 48 0.01
900 339 0.10
901 247 0.07
902 154 0.05
903 14 0.00
904 198 0.06
905 86 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (894 bp):
AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
CTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
ACCAGCACCCATCGCACATCATGTGCGCACCCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGC
CGCCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAG
CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAATG
AACTCCGTATGCTTAGACTGGAATGAACTCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
GCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGTCCCCCTCTGCGTGCT
ACCGATCTTACTACCGCAACCCTCGGTTCGCTCTGATCTTAGACTGGGAATGAACTCCGTATGCC
TAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGC
GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTTATGCCAATG
CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
GACGACTCGTTTTCTATTGTTCACGATTTTTGAAACTTTTTACGGTTCTGGATTTTTGAAAATTT
TTTTGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG
Found at i:5663514 original size:26 final size:26
Alignment explanation
Indices: 5663476--5663528 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5663466 CCGGTCTGAT
* *
5663476 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACTAGGAATGAACTCCATATG
5663502 CTTAGACTAGGAATGAACTCCATATG
1 CTTAGACTAGGAATGAACTCCATATG
5663528 C
1 C
5663529 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.32, C:0.19, G:0.21, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCATATG
Found at i:5664630 original size:159 final size:159
Alignment explanation
Indices: 5664341--5664718 Score: 499
Period size: 159 Copynumber: 2.4 Consensus size: 159
5664331 ATGTGCAGCT
* *
5664341 GCAACCCTC-AGTCCGATCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACG
1 GCAACCCTCGA-TCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACG
* * **
5664405 AAACGAGCGTGCGGGCGCTTAGCTTGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCTGGGT
65 AAACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCTGGGT
* *
5664470 CCCCATCTGTGTGCTATCGATCCTACTGCC
130 CCCCATCTGCGTGCTACCGATCCTACTGCC
* * * * * *
5664500 GCAACCCTCGATCTGATCCGATCTTATATTGGGAATAAACTCCGTATGCCTAAGTCAACCCATGG
1 GCAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
* * *
5664565 AACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGAT-TGATCGGGT
66 AACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCT-GGGT
* * *
5664629 CCCCCTTTGCGTGCTACCGATCCTGCTGCC
130 CCCCATCTGCGTGCTACCGATCCTACTGCC
** * * *
5664659 ATAGCCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
1 GCAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
5664719 GACCAAACGA
Statistics
Matches: 188, Mismatches: 29, Indels: 4
0.85 0.13 0.02
Matches are distributed among these distances:
158 2 0.01
159 185 0.98
160 1 0.01
ACGTcount: A:0.21, C:0.30, G:0.28, T:0.21
Consensus pattern (159 bp):
GCAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGA
AACAAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCAGCTGGGTC
CCCATCTGCGTGCTACCGATCCTACTGCC
Found at i:5666264 original size:902 final size:899
Alignment explanation
Indices: 5664529--5667044 Score: 3530
Period size: 902 Copynumber: 2.8 Consensus size: 899
5664519 GATCTTATAT
*
5664529 TGGGAATAAACTCCGTATGCCTAAGTCAACCCATGGAACAAGCGTGCGGGCGCTCAGCCGGCCAG
1 TGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGCCGGCCAG
* * * *
5664594 AGGGGTGGGATGCGCAAGCCGGGGATTGATCGGGTCCCCCTTTGCGTGCTACCGATCCTGCTGCC
66 AGGGGCGGGATGCGCAAGCTGGGGATCGATCGGGTCCCACTTTGCGTGCTACCGATCCTGCTGCC
** *
5664659 ATAGCCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC--G-A
131 GCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAGAA
* * * * * * * * *
5664721 CCAA---ACGAACGGGTGGGCGGGCACTATGTCAGCCAGAAAGACGGATGCGCAAGCCGTGCATC
196 ACAAGGGACGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGAGGGATGCGCAAGCCGTGGATC
* * * *
5664783 GATGGGGTGGTAGGTTGGTTTGGGCATATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
261 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
* * * *
5664848 TTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAGGACGACTCATTTT
326 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTT
*** * *
5664913 CTATTTTTCATGATTTACAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGCAAAGAGT
391 CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
* * *
5664978 TTTGGCCCCAAACTTGGTAGACGTGATCCTTATA-TTTTGTTGCCATGGACAAAAAAATTCAGCT
456 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* *
5665042 AAAAACTCAAAGTGTACAAGATTTTGTAACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTA
521 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* * *
5665107 TTGGCTACTGGCAGCAAACCTGTAAAATCTCAGATGCTCTTTAA-AGGGGTGTGAGTTCTCGAGG
586 ATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGA-GGGTGTGAGTTCTCGAGG
* **
5665171 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACAACCAGCACCCATCGCACATCATCCACGT
650 TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTACGT
* ** * *
5665236 ACACCCCCCCGCCCCCCGATCATCGGAACCCCATTGTCGCCGGTCAGGTTCTCCGACGGCGCTCC
715 ACACCCCCCCGCCCCCCGATCATCGAAACCCCAACGTCGCCGATCAGGTTCTCCGACGACGCTCC
**
5665301 GACAATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
780 GACAATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTC
* *
5665366 GCAACCCTCGGTCCGGTCCGATCTTCGACTGTGAATGAACTCTGTATGCTTAGAC
845 GCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
* * * * * * *
5665421 TGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTCGGGCAG
1 TGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGCCGGCCAG
* * * * *
5665486 AGGGGCGGGATGCGCAAGCTAGGGATC-AGTCGGGTCCTACTTTGCATGCTGCCGATCTTGCTGC
66 AGGGGCGGGATGCGCAAGCTGGGGATCGA-TCGGGTCCCACTTTGCGTGCTACCGATCCTGCTGC
* *
5665550 CGCAACCCTCGATCCGGTCCAATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGATG
130 CGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA-G
* *
5665615 AAACAAGCGGGCGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGATGGGATGCGCAAGCCATG
194 AAACAAG-GGACGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGA-GGGATGCGCAAGCCGTG
* *
5665680 GATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCGTGCCGATGCCATTTTTA
257 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTA
* * *
5665745 TGGCTTGTAAATTCATACAATGGTCCCTAAAGCATTCACGTGAAGTTTCTTGGCAAGACAACTCG
322 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCG
5665810 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
387 TTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAG
* * * * *
5665875 GGGTTTTGGCCCCAAACTTGGTAGTCATGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTT
452 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* * *
5665940 AGCCAAAAACTCAAAATGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAATTCAGACAC
517 AGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
5666005 TTTAATGGCTGCTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTTTCA
582 TTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCG
* *
5666070 AGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAACTACTAGCACCCATCGCACATCATGTA
647 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTA
* * * *
5666135 CGTACACCCCCCGGCCCCCCGATCGTCGAAACCCCAACG-CTGTCGATCAGGTTCTCCGACGATG
712 CGTACACCCCCCCGCCCCCCGATCATCGAAACCCCAACGTC-GCCGATCAGGTTCTCCGACGACG
* * * *
5666199 CTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCTCCAGCACATGCCCGAGCGCAGGATGTGC
776 CTCCGACAATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * * *
5666264 TGTCGCGACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCTGTATGCTTAGGC
841 TGTCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
* * * * **
5666323 TGGGAATCAACTCCGTATGCCTAAGTCAACCAATGAAACAAGCGTGTGGGTGCTCAGCCAACCAG
1 TGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGCCGGCCAG
* * * ** *
5666388 AGGGCCGGGTTGCGTAAGCTGGGGATCGATCGGGTCCCCCAC-TT-CGTGCTTTCAATCCTGCTG
66 AGGGGCGGGATGCGCAAGCTGGGGATCGATCGGGT--CCCACTTTGCGTGCTACCGATCCTGCTG
* * * *
5666451 CCGCAACCCTC-ATTCTGGTCTGATCTTGGACTGGGATTGAACTCCGTATGCCTAAGCCAACCGA
129 CCGCAACCCTCGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGA
* * * * ** * *
5666515 CGAAACGAGTGGACGGGCAGACGGGTTGGCACTACGCCGACCAGAGAGACGGGATGCACAAGCCG
193 -GAAACAAG-GGACGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGA-GGGATGCGCAAGCCG
*
5666580 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATTCCATTTT
255 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*** **
5666645 TATTATTTGTAAATTCATACGGTGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACT
320 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACT
** * * *
5666710 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGATTCGAGATTTTTTAAAATTTTTTTTGG
385 CGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTTCGG
* *
5666775 AAAGAAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCTCAAAAAA
449 -AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
*
5666840 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
513 ATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
*
5666905 ACACTTTAACGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG-GGAGTGTGAGT
578 ACACTTTAATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGG-GTGTGAGT
* * * **
5666969 TCTCGAGGTTTGATGAGGGATTGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATTACACATC
642 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATC
*
5667034 ATGTGCGTACA
707 ATGTACGTACA
5667045 ATCAGCCTAA
Statistics
Matches: 1428, Mismatches: 176, Indels: 28
0.88 0.11 0.02
Matches are distributed among these distances:
891 1 0.00
892 166 0.12
895 1 0.00
896 4 0.00
900 30 0.02
901 227 0.16
902 738 0.52
903 14 0.01
904 247 0.17
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
TGGGAATAAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGCCGGCCAG
AGGGGCGGGATGCGCAAGCTGGGGATCGATCGGGTCCCACTTTGCGTGCTACCGATCCTGCTGCC
GCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAGAA
ACAAGGGACGGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGAGGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTT
CTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGT
TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
ATGGCTGCTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTCTCGAGGT
TTGATGAGGGATAGGGGGCCAATATAAGGGCCAACTACCAGCACCCATCGCACATCATGTACGTA
CACCCCCCCGCCCCCCGATCATCGAAACCCCAACGTCGCCGATCAGGTTCTCCGACGACGCTCCG
ACAATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCG
CAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGAC
Found at i:5666319 original size:26 final size:26
Alignment explanation
Indices: 5666290--5666342 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5666280 CTGGTCCGAT
* * *
5666290 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
5666316 CTTAGGCTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
5666342 C
1 C
5666343 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:5667848 original size:26 final size:26
Alignment explanation
Indices: 5667812--5667864 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5667802 CCGGTCCGAT
*
5667812 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCGGTATG
*
5667838 CTTAGGCTAGGAATGAACTCGGTATG
1 CTTAGACTAGGAATGAACTCGGTATG
5667864 C
1 C
5667865 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCGGTATG
Found at i:5668760 original size:26 final size:26
Alignment explanation
Indices: 5668724--5668776 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5668714 TCGGTCCTAT
*
5668724 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5668750 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5668776 C
1 C
5668777 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5669659 original size:26 final size:26
Alignment explanation
Indices: 5669623--5669672 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
5669613 TCTGGTCCAT
*
5669623 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
5669649 CTTAGACTGGGAATGAACACCGTA
1 CTTAGACTGGGAATGAACACCGTA
5669673 CGCCTAGTCA
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCGTATG
Found at i:5670550 original size:26 final size:26
Alignment explanation
Indices: 5670521--5670573 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5670511 CCGGTCTGAT
5670521 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5670547 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5670573 C
1 C
5670574 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5671464 original size:26 final size:26
Alignment explanation
Indices: 5671416--5671466 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
5671406 TCCGATCTTA
**
5671416 AGACTGAGAATGAACTCTTTATGCTT
1 AGACTGAGAATGAACTCCGTATGCTT
*
5671442 AGACTGGGAATGAACTCCGTATGCT
1 AGACTGAGAATGAACTCCGTATGCT
5671467 AAGTCAACCC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.18, G:0.24, T:0.29
Consensus pattern (26 bp):
AGACTGAGAATGAACTCCGTATGCTT
Found at i:5672349 original size:26 final size:26
Alignment explanation
Indices: 5672313--5672362 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
5672303 CTGGTCCAAT
*
5672313 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
5672339 CTTAGACTGGGAATGAACACCGTA
1 CTTAGACTGGGAATGAACACCGTA
5672363 CGCCTAAGTC
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.20, G:0.26, T:0.24
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCGTATG
Found at i:5673230 original size:902 final size:900
Alignment explanation
Indices: 5667282--5677040 Score: 13607
Period size: 904 Copynumber: 10.9 Consensus size: 900
5667272 TTCTGCCTGC
* * * *
5667282 CAATGATCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACAACTCGTTTTCTATTTTTCATGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
** * *
5667347 TTTTTGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAAGGGGTTTTGGCCCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
** *
5667412 TTGGTACTCGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAAT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
5667477 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCGATTTCAGACACTTTAATGGCTACTAGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5667542 GCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
5667607 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCTCCGGCC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCGG-C
* * * *
5667672 CCCCCGATCGTCGGAACCCCAATGCTATCGATCAGGTTCTCCGGCGATGCTCCAACGATGGTGCC
389 CCCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* * **
5667737 CCGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGTTACCCTCGGT
454 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * * * *
5667802 CCGGTCCGATCTTAGACTAGGAATGAACTCTGTATGCTTAGGCTAGGAATGAACTCGGTATGCCT
519 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * *
5667867 AAGTCAACCAACGAAACGAGCGTGTGGG-AGCTCAGCTGGCCAGAGGGGCGGGATGCACAAGCCG
584 AAGTCAACCCACGAAACGAGCGTGCGGGCA-CTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* ** * * ** *** * *
5667931 GGGATTGATCGGGTCCCCCACTGCGTGCTGTCGATCCTACTGCCATGACCCTCGTTCCGATCTGA
648 GGGATCGGCCGGGT-CCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGA
* *
5667996 TCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGACGAATGG
712 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-GG-CG---GG
* * * *
5668061 ACGGGCGGGCGGGCACTATGTCGGCCAGAGAGACGGGATGCGCAAACCGTGGATCGATAGGGTGG
770 -CGGGCGGGCGGGCACTACGCCGACCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGG
* *** *
5668126 TAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCATTGCCATTTTTATGGCTTGTAAATTC
833 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTC
5668191 ATA
898 ATA
* * * *
5668194 CAATGATCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCAATTTTTCATGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
** * *
5668259 TTTTTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
*
5668324 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAACAAAATTCAGCTAAAAACTCGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
5668389 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCACATTTAAGACACTTTAATGGCTACTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * * *
5668454 GCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGCTCTCAATGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
5668519 GGGGGCCAATACAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCC
* ** * * *
5668584 CCCTCGATCGCCGGAACCCTAATGCCGTCGATCAGGTTCTCTGGCGATTCTCC-AGCGATGTTGC
390 CCC-CGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGA-CGATGGTGC
** * **
5668648 CCCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCAA
453 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * *
5668713 TTCGGTCCTATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCC
518 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
** * * * *
5668778 TAAGTCAACCCATTAAACGAGCGTGCGGGCGCTCAGCTGGCCAGAGGGGCGGGATGCGCAAACCT
583 TAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * *
5668843 GGGATCGACCGGGGTGCCCTCTGCGTGCTGTCGATCCTGTTGCCGCAACCCTCGGTTCGGTCTGA
648 GGGATCGGCC-GGGTCCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGA
** * * * *
5668908 TGATAGACTAGGAATGAACTCCGTATGCGTAAGCCAACCGACGAAACGAGCGTGCGGGCAGGCGG
712 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGG
* * * * *
5668973 GCGGGCACTACGTCGACCAGAGAGACGAGATACGCAAGCCCTAGATCGATAGGGTGGTAGGTGTG
777 GCGGGCACTACGCCGACCAGAGAGACG-GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* *
5669038 TTTAGGCACATCTTCATATTTCTACGTGCCAATGGCATTTTTATGGCTTGTAAATTCATA
841 TTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
5669098 CAATGGTCCCTTAAGCCATCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * *
5669163 TTTTCAAAACTTTATGCGGTTCGGGATTTTTTAAAATTTTTTTGAAAGGATTTTTGGCCCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
** *
5669228 TTCATAGACGTGATCCTTGTATTTTTGTTGGTATGCAC-AAAAAATTCAGCTAAAAACTCGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
5669292 GTACAAGATTTTGTGACC-TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5669356 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTTTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
5669421 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCGGC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGC
* * * ** *
5669486 CCCTCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTG-C
389 CCCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* * * *
5669550 CCGACGAAG-AAAATGCAGCACCAGCACATACCCGAGCCCAGCATGTGTTCCCGCAACCCTCGGT
454 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * *
5669614 CTGGTCC-ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACACCGTACGCCT
519 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
*
5669678 -AGTCAA-CCACGAAACGAGCGTGCGGGCACTTAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
584 AAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * **
5669741 GGATCAGCCAGGTACCCTCCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCAAAT
649 GGATCGGCCGGGTCCCCT-CTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGAT
* ** * *
5669806 CTTAGACTGGGAATGAACTCTGTATGCCT-AGCCAACTAACGAAACGAGCGGGCAGGCGGGAGGG
713 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* *
5669870 CGAGCACTACG-CGACCAAAGAGAACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
778 CGGGCACTACGCCGACCAGAGAG-ACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
5669934 TTAGGCCACATTTTCACATTTCTCCATGCCAA-GCCATTTTTATGGCTTGTAAATTCATA
842 TTAGG-CACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
5669993 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTACGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* *** * * *
5670058 TTTTCAAAAATTTTTGCGGTTTTTGATTTTTTAAAATTTTTTTGGAAGGCGTTTTGGACCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
*
5670123 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5670188 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTTCTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
5670253 GTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
5670318 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGCCC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
* * *
5670383 CCCTATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTTCGACGATGGTGCCCC
391 CCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
* * * * * * *
5670448 GACGAAGAAAAATACGACACCAACACATGCGCTAGCCCATCATGTGCTGCCGCAACCATCGGTCC
456 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
* *
5670513 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAA
521 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
5670578 GTCAACCCACGAAACGAGCGTGTGGGCACTCAGCCAGCCAGAGGGGCGGCATGCGCAAGCCAGGG
586 GTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * ** * * *
5670643 ATCGGCCGGTTCCCCCTCTGTGTGCTGCAGATTATGCTGCCGCAACCCTTGGTCCGGTCTGACCT
651 ATCGGCCGGGT-CCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGATCT
* *
5670708 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACG-AA--AG-GGGCGGGTGGGC---C-
715 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCG
* * * * * *
5670765 GGCACTACGCCGGCTAGAGAGACGGCATTCGCGAGTCGTGGATCGATAGGGTGGTAGGTGGATTT
780 GGCACTACGCCGACCAGAGAGACGG-ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * *
5670830 AGGTACATCTTCATATTTCTGCATGCAAATGCCATTTTTATGGCTTGCAAATTCATG
844 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
5670887 CAATGGTCCCTTAAGCCTTCCCGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * * *
5670952 TTTTCACAAC-TTTTACGGTTCGGGATTTTTTTAAATTTTTTCGGAAGGAGTTTTAGCTCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
5671016 TTGGTAGCCGTGATCCTTGTATGTTTGTTGGCATGCACAAAAAAATCCAGCTAAAAACTTGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5671081 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5671146 GCAAACTTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
5671211 GGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATGATGTGCGCACACCCCCCGGCCC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CC
* *
5671276 CCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGTGATGCTCCGGCGATGGTG-CC
390 CCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
** * *
5671340 CGGTGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCC--CATGTGCTGCCGCAACCCTCGGTT
455 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* **
5671403 CGGTCCGATCTTAAGACTGAGAATGAACTCTTTATGCTTAGACTGGGAATGAACTCCGTATG-CT
520 CGGTCCGATCTT-AGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
5671467 AAGTCAACCCACGAAACGAGCGTGCCGGCTCTCAGCCGGCCAGAGGGGCGGGATGAGCAA-CC-G
584 AAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * * **
5671530 GGATCGGCGGGGTCACCCTCTGACGTGCTGCCGATCCT-TCTGCCACAACCCTCAGTTTGGTCTG
649 GGATCGGCCGGGTC-CCCTCTG-CGTGCTGCCGATCCTGT-TGCCGCAACCCTCGGTCCGGTCTG
* * ** *
5671594 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCAGTCCGGGCAGGC
711 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC-GGGCGGGCGGGC
* * * *
5671659 GGGCGGGCACTACGTCGACCAGAGAGACGAGATACGCAAGCCCTAGATCGATAGGGTGGTAGGTG
775 GGGCGGGCACTACGCCGACCAGAGAGACG-GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * **
5671724 TGTTTAGGCACATCTTCATATTTCTACGTGCCAATGGTATTTTTATGGCTTGTAAATTCATA
839 GGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
5671786 CAATGGTCCCTTAAGCCATCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * *
5671851 TTTTCAAAACTTTATGCGGTTCGGGA-TTTTTAAAATTTTTTTGAAAGGATTTTTGGCCCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
** *
5671915 TTCATAGACGTGATCCTTGTATTTTTGTTGGTATGCAC-AAAAAATTCAGCTAAAAACTCGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
5671979 GTACAAGATTTTGTGACC-TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5672043 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGAGGGTGTGAGTTTTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
5672108 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGCGGC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC-CGGC
* * * ** * *
5672173 CCCTCGATCGCCGGAACCCTAATGTCGTCGGTCAGGTTCTCTGGCGATGCTCCGACGATGGTGCC
389 CCCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* * * *
5672238 CCGACGAAGAAAAATGCAGCACCAGCACATACCCGAGCCCAGCATGTGTTCCCGCAACCCTCGGT
454 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* * * *
5672303 CTGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACACCGTACGCCT
519 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
5672368 AAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
584 AAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGG
* * **
5672433 GGATCAGCCAGGTACCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCAAAT
649 GGATCGGCCGGGT-CCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGAT
* ** * *
5672498 CTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACTAACGAAACGAGCGGGCAGGCGGGAGGG
713 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* *
5672563 CGAGCACTACGCCGACCAAAGAGAACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
778 CGGGCACTACGCCGACCAGAGAG-ACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* * *
5672628 TTAGGCACATTTTCACATTTCTCCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
842 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
5672687 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTTACGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * * *
5672752 TTTTCAAAAATTTTTGCGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGCGTTTTGGACCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
*
5672817 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5672882 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTTCTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
5672947 GTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
5673012 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCGGCCC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
* *
5673077 CCCTATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
391 CCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
* * * * * * *
5673142 GACGAAGAAAAATACGACACCAACACATGCGCTAGCCCATCATGTGCTGCCGCAACCATCGGTCC
456 GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
* *
5673207 GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAA
521 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
5673272 GTCAACCCACGAAACGAGCGTGTGGGCACTCAGCCAGCCAGAGGGGCGGCATGCGCAAGCCAGGG
586 GTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
* * * ** * * *
5673337 ATCGGCCGGTTCCCCCTCTGTGTGCTGCAGATTATGCTGCCGCAACCCTTGGTCCGGTCTGACCT
651 ATCGGCCGGGT-CCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGATCT
* *
5673402 TAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACG-AA--A----G-GGGCGGGTGGGCG
715 TAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCG
* * * * * *
5673459 GGCACTACGCCGGCTAGAGAGACGGCATTCGCGAGTCGTGGATCGATAGGGTGGTAGGTGGATTT
780 GGCACTACGCCGACCAGAGAGACGG-ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * * *
5673524 AGGTACATCTTCATATTTCTGCATGCAAATGCCATTTTTATGGCTTGCAAATTCATG
844 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
5673581 CAATGGTCCCTTAAGCCTTCCCGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * * *
5673646 TTTTCACAAC-TTTTACGGTTCGGGATTTTTTTAAATTTTTTCGGAAGGAGTTTTAGCTCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * *
5673710 TTGGTAGACGTGATCCTTGTATGTTTGTTGGCATGCACAAAAAAATCCAGCTAAAAACTTGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5673775 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTCCAGACACTTTAATGGCTACTGGCA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5673840 GCAAACTTGTAAAATCTGAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
261 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
5673905 GGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATGATGTGCGCACACCCCCCGGCCC
326 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
* *
5673970 CCCTGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCC
391 CCC-GATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
** * *
5674035 CGGTGAAGAAAAAAGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTT
455 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * ** *
5674100 CGGTCCGATCTTAGACTGAGAAAGAACTCTTTATGCTTAGACTGGGAATGAACTCCGTATGGCTA
520 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
5674165 AGTCAACGCACGAAACGAGAGTGCCGGCTCTCAGCCGGCCAGAGGGGCGGGATGAGCAAGCCGGG
585 AGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
* * * * * **
5674230 GATCGGTCGGGTCACCCTCTACGTGCTGCCGATCCT-TCTACCACAACCCTCAGTTTGGTCTGAT
650 GATCGGCCGGGTC-CCCTCTGCGTGCTGCCGATCCTGT-TGCCGCAACCCTCGGTCCGGTCTGAT
* * * *
5674294 CTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAACGAGCAGGTGGGCGGGCGGG
713 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * * *
5674359 CGGGCACTACGCCGGCCATAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGAGT
778 CGGGCACTACGCCGACCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
5674424 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
842 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
5674483 CAATGGTCCCTTAAGCC-TCTACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCACG
1 CAATGGTCCCTTAAGCCTTC-ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
* * *
5674547 ATTTTCCAAACTATTTGCGGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
65 ATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * *
5674612 CTTGGTAGACGTGATCCTTGTATTTTTTTTTGCATGCACAAAAACATTCAGCTAAAAACTCGAAG
130 CTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAG
* *
5674677 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCAATTTGAGACACTTTAATGGCTACTGGC
195 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
*
5674742 AGCAAACCTGTGAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
260 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * *
5674807 AGGGGGCCAAAATAAGGGCCAAGTACCATCACCCATCACACATCATGTGCGCACACCACCCCCTG
325 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCC-G
* * * * * * *
5674872 GCCCCCCCGATCGTCGGAACCTCAATGCCATCGGTCAGATTCTCCGGCAATGCTCCGGCGATGGT
387 G-CCCCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGT
* * * * *
5674937 GCCCTGACGAACAAAAATGTGGCACCAGCACATGCCCGAACCCAGCATGTGCTGCCACAACCCTC
451 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * *
5675002 GGTCTGGTCCGATCTTAGACTGGGAATGAACTTCGTATGC-TAGACTAGGAATGAACTCCGTATG
516 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* *
5675066 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAAAGTGGCGGGATGCGCAAGC
581 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* * * * * * * * *
5675131 CGGGAATCGGCCGGGTCCTCCTCTGCGTACTGTCAATCCTGCTGTCGTACCCCTCGGTCCAGTCT
646 CGGGGATCGGCCGGGTCC-CCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCT
* * *
5675196 GATCTTAGACTGGGAATGAACTCCGTATGCCTAACCCAACCGACGAAACGAGTGGGCGGGCAGGC
710 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC
* * * * * *
5675261 GGGCGGGCACGACACCGACCAGAGAGACGGGTGCGCAAGCTGTGGATTGATAGGGTGGTTGGTGG
775 GGGCGGGCACTACGCCGACCAGAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * *
5675326 GTTTAGGCACATCTCCATATTTCTACCTGCCAATGCCATTTTTATGGCTTGTAAATTCACA
840 GTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
5675387 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGGCTCATTTTCTATTTTTCACGA
1 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
** *
5675452 TTTTCAAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGTCCCCAAAC
66 TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
5675517 TTGGTAGATGTGATGCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTAGAAGT
131 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5675582 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGGA
196 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
5675647 GCAAACCTGTAAAATCTCAAATGCTCTTTGAA-GGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT
261 GCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* * *
5675711 AGGGGGCCAATATAAGGGCCAAGTACCAGCATCCATCGCACATCATCTGCGCACATCGCCCCGGG
325 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-C-CCCCCGG
* * * * *
5675776 CCCCCCGATCACCGGAACACCAATGCCACCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGC
388 CCCCCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGC
* * * *
5675841 CCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTCCTGCTGTAACCCTCGG
453 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * ** * *
5675906 TCTGGTCCGATCTTAGACTAGGAATGAACTCTATATGCTTAGACTGGGAATGAAATCTGTATGCC
518 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
** * * * * * *
5675971 TAAGTCAACCCACGAAACGAGCGCACGGGCGCTCAGCCGACTAGAGGGGCGGAATGCACAAGTCG
583 TAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * * * * * * * *
5676036 AGGATCGACCGAGTCCCCTTCTGCGAGTTGCTGATCCTATTGCTGCAACCCTCAGTCTGGTCTGA
648 GGGATCGGCCGGGTCCCC-TCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGA
* * * *
5676101 TCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACTAGCGGGCAGGCGGGCAG
712 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGG
* ** * * * *
5676166 ACGGGCACTATACCGGCCAAAGAGACGGGATGCGTAAGCTGTGGATCGATAGGGTGGTAGGTGGG
777 GCGGGCACTACGCCGACCAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
*
5676231 TTTAGGCACATCTTCATATTTTTA-AGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
841 TTTAGGCACATCTTCATATTTCTACA-TGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* *
5676291 CAATGG-CCCGTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCATG
1 CAATGGTCCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
** * * * * * * * * *
5676355 ATTTTTGAACCATTTTACTGTTTGGAATTTTTTTAAAATTTTTTTGGAAGGATTTTTGTCCCCAA
65 ATTTTCAAAACTTTTTGCGGTTCGGGA-TTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAA
* * ** * * *
5676420 ACTTAGTAGTCGTGATTATTGTATTTTTTTTGGCATGCACAAAAACATTTAGCTAAAAACTCGAA
129 ACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAA
*
5676485 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACT-G
194 GTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGG
* *
5676549 CTAGCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTCGAGGATTGATGAGGG
259 C-AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGG
*
5676614 ATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCTG
323 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC-G
* * *** * *
5676679 ACCCCTCCGATCGTCGGAACTGTAACGCCACCGGTCAGGTTCTCCGGCGA---T--G-C-----T
387 GCCCC-CCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGT
* * * * *
5676733 ---CCGACGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCTAGCATGTGCTACCGTAACCCTC
451 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * * * *
5676795 AGTCTGGTCCGTTCTTAGACTGGGAATGAACTCCGTTTGCTTAGACAGGGAATGAACTCCG-ATG
516 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * * *
5676859 CCTAAGTCAACCCACGAAATGAGCGTGCGAGCGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGT
581 CCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
** * **
5676924 CGGGGATCGGCCGGGTCCCC-CT---T--T---G-T-CTGTTTTCGCAACCCTCGGTCTGGTCCA
646 CGGGGATCGGCCGGGTCCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTG
* * *
5676978 ATCTTAGACTGGGAATGAACTCCATATGCCAAAGCCAACAGACGAAACGAGCGGGCGGGCGGG
711 ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGG
5677041 TAGGCGCTAC
Statistics
Matches: 7881, Mismatches: 880, Indels: 206
0.88 0.10 0.02
Matches are distributed among these distances:
878 78 0.01
879 1 0.00
880 1 0.00
883 1 0.00
888 3 0.00
889 19 0.00
890 150 0.02
891 200 0.03
892 45 0.01
893 658 0.08
894 694 0.09
895 297 0.04
896 130 0.02
897 500 0.06
898 165 0.02
899 337 0.04
900 242 0.03
901 319 0.04
902 1027 0.13
903 611 0.08
904 1044 0.13
905 519 0.07
906 142 0.02
907 6 0.00
908 2 0.00
909 1 0.00
910 1 0.00
911 6 0.00
912 674 0.09
913 8 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (900 bp):
CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
TTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
CCCGATCGCCGGAACCCCAATGCCACCGATCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
GTCAACCCACGAAACGAGCGTGCGGGCACTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGG
ATCGGCCGGGTCCCCTCTGCGTGCTGCCGATCCTGTTGCCGCAACCCTCGGTCCGGTCTGATCTT
AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGG
GCACTACGCCGACCAGAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
Found at i:5673244 original size:26 final size:26
Alignment explanation
Indices: 5673215--5673267 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5673205 CCGGTCTGAT
5673215 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5673241 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5673267 C
1 C
5673268 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5674160 original size:26 final size:26
Alignment explanation
Indices: 5674109--5674160 Score: 68
Period size: 26 Copynumber: 2.0 Consensus size: 26
5674099 TCGGTCCGAT
**
5674109 CTTAGACTGAGAAAGAACTCTTTATG
1 CTTAGACTGAGAAAGAACTCCGTATG
* *
5674135 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAAAGAACTCCGTATG
5674161 GCTAAGTCAA
Statistics
Matches: 22, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.31, C:0.17, G:0.23, T:0.29
Consensus pattern (26 bp):
CTTAGACTGAGAAAGAACTCCGTATG
Found at i:5675052 original size:25 final size:25
Alignment explanation
Indices: 5675017--5675066 Score: 82
Period size: 25 Copynumber: 2.0 Consensus size: 25
5675007 GGTCCGATCT
* *
5675017 TAGACTGGGAATGAACTTCGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
5675042 TAGACTAGGAATGAACTCCGTATGC
1 TAGACTAGGAATGAACTCCGTATGC
5675067 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.30, C:0.18, G:0.26, T:0.26
Consensus pattern (25 bp):
TAGACTAGGAATGAACTCCGTATGC
Found at i:5675955 original size:26 final size:26
Alignment explanation
Indices: 5675917--5675969 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5675907 CTGGTCCGAT
*
5675917 CTTAGACTAGGAATGAACTCTATATG
1 CTTAGACTAGGAATGAAATCTATATG
* *
5675943 CTTAGACTGGGAATGAAATCTGTATG
1 CTTAGACTAGGAATGAAATCTATATG
5675969 C
1 C
5675970 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.15, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAAATCTATATG
Found at i:5677166 original size:26 final size:26
Alignment explanation
Indices: 5677130--5677182 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5677120 CCGGTCTGAT
* *
5677130 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5677156 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5677182 C
1 C
5677183 CTAAAACCCA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5678080 original size:26 final size:26
Alignment explanation
Indices: 5678030--5678082 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5678020 CCGGTCCGAT
**
5678030 CTTAGACTGGGAATGAACTTTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5678056 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5678082 C
1 C
5678083 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5682194 original size:26 final size:26
Alignment explanation
Indices: 5682165--5682217 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5682155 CTGATCCGAT
*
5682165 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5682191 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5682217 C
1 C
5682218 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5683119 original size:26 final size:26
Alignment explanation
Indices: 5683068--5683120 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5683058 TCGGTCTGAT
* *
5683068 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCCTATG
5683094 CTTAGACTGGGAATGAACTCCCTATG
1 CTTAGACTGGGAATGAACTCCCTATG
5683120 C
1 C
5683121 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCCTATG
Found at i:5683340 original size:903 final size:903
Alignment explanation
Indices: 5681298--5698964 Score: 22445
Period size: 903 Copynumber: 19.8 Consensus size: 903
5681288 TCGATCCGAT
* * * * * *
5681298 CTTAGACTTGGAATGAACTTCGTATGCTTAAGTCAACCCATGAAACAAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
5681363 TGGCCAGATGGGTGGGATGCGCAAGTCGGGGATCGATCGGGTCCCACTCTGCGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * * * *
5681428 TGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACCGGGAATGAAGTCTGTATGCATAAGCCAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * *
5681493 CCGACGGAACGAGCGAGCGGGCGGGTGGGCGGGCACTACGTCAGCCAGAGAAACGGGATGCGCAA
196 CCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
** * *
5681558 GTTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCTGCATGCCAATGCTA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
5681623 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
5681688 GACTCGTTTTTTATTTTTCACGATTTTTGAAACCTTTTACGGTTCAGGATTTGTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTT
* ** * *
5681753 TCGGAAGAAGTTTTCTCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCAAAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * * * *
5681818 AAAATTCAGCTAAAATCTCGAAGTGTA-TAGCATTCTGTTACCATTTGAAAAGAGTGTCCCCATT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAG-ATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
5681882 CCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
5681947 AGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * **
5682012 ATCATGTGCGCACACCCCCCTGG-CCCCCCGATCGTCGGAACCCTAGTGCCGTCAATCAGGTTCT
713 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * *
5682076 -C--C---G----G-CGATGGTGCCCCGATGAAGAAAAATGCTGCACTAGCACGTGCCCGAGCCC
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * * *
5682130 AACATGTGCTACCGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGTATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
5682191 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * * **
5682256 CGGCCAGAGGGGCGGGATGCTTAAGACGGGGATCGATTGTGTCCCCCTCTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * *
5682321 TGCTATCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGACTAAGCCAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * ** *
5682386 CCGACGAAACGAGCGGGTGGGCGGGTGGGCGAGCATTACGCTAGCCAGAGAGCCGGGATGCGCAA
196 CCGACGAAACGAGCGGG-CGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
**
5682451 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
5682516 TTTTTATGTCTTGTAATTTCAAACAATGGT-CCTTAAGCCTTCACGTGAAGTTTCATGGAAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * **
5682580 GACTCGTTTTCTCTTTTTCACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTT-AAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * *
5682644 CAGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGAATTTTTGTTGGCATGCACAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
5682709 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGGAAAAAGTGTCCCCATTTT
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
5682774 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGTGGGTGTAAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
5682839 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATTAGGGCCAAGTGCCAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** *
5682904 CATGTGCGCACACCGCCCCCGGGCCCCTCGATCATC-GACACCCTAATGCCGTCGGTCAGGTTCT
715 CATGTGCGCACACC-CCCCCGGCCCCCCCGATCGCCGGA-ACCCCAATGCCGTCGGTCAGGTTCT
** * * ** *
5682968 CCGGCGATGCTCCGGGGATGGTGCCTCGGCGAAGAAAAATATGGCACCAGCACATGCCCGAGCCT
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * ** * *
5683033 AGCATGTGCTACCGTAACACTCAATTCGGTCTGATCTTAGACTGGGAATGAACTTCGTATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5683094 CTTAGACTGGGAATGAACTCCCTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCACTGAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * *
5683159 CGGCCAGAGGGCCGGGATATGCAAGACAGGGATCGATCGGGTCCCCCTCTGCATGTTGCCGATAC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** *
5683224 TGCTGCCATAACCCTCGTTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
5683289 CCGACAAAATGAGCGGGCAAGCAGGCGGGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
5683354 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
5683419 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * * * * *
5683484 GAGTCGTTTTTTATTTTTCATGACTTTTGAAACTTTTTGCGGTTCTGGATTTTTCAAATTTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * * *
5683549 CTGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTTATTTTTGTTGGCACGTACAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCACAAA
*
5683614 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
5683679 CAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
5683744 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
5683809 TCATGTGCGCACACCCCCCTGGCCCCCCTGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTTTT
714 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * * * *
5683874 CGACGATGCTCCGACGATGGTGCCCTGGCGAAGAAATATGCGACACCAGCACATGCCTGAGCCCA
779 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * *
5683939 GCATGTGCTGCCGTAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCTGTATG
844 GCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
5683999 CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGCGGTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
5684064 CGGCCAGAGGGGTGGGATGCGCAAGCTGAGGATCGGTCAGGCCCCCCTCTACATGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
*** * * * * * **
5684129 TGCTATAGCAGCCCTCGGTCCGGTCCGATCTTGGTTTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * **
5684194 CCGACGAAACGAGCGGGTGGGTGGGCGTGCGGGCACTACGACGGCCAGAGAGACGGGATGCTTAA
196 CCGACGAAACGAGCGGG-CGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
5684259 GCCATGGATCGATAGGGCGGCAGGTGGATTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * *
5684324 TCTTCATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * ***
5684389 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCTGTTCAAAATTTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * *
5684454 TGGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCGCAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
5684519 AAATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
5684584 AGACACTTTAATGGCTACTGGCAGCAAACTTCTAAAATCTCAAAGGCTCTTTAAGGGGGTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
*
5684649 TTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
5684714 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
715 CATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCC
* ** * *
5684779 GACGATGCT-C--C-A----G---C--C-AAGAAAAATATGGCACCAGCACATGCCCAAGCCTAG
780 GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * *
5684830 CATGTGCTGCCGCAACCCTTGGTCCGGTCCGATCTTAGACTGGTAATGAA--CCATATG
845 CATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
5684887 CTTACACTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGTGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * *
5684952 CGACCAGAGGGGCAGGATGCGCCAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCTGCCAATC
66 CGGCCAGAGGGGCGGGATGCG-CAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATC
* *
5685017 CTGCTGCCGCAACCTTC-AATCTGGTCTGATCTTAGACTGGGAATGAACT-CG--T--CTAAGCC
130 CTGCTGCCGCAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5685076 AACCGACGAAACGA-------GTGGACGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCA
194 AACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* ***
5685134 AGCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
5685199 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATTAAGTTTAATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* ** * **
5685264 CGACTCCTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTTAGGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
5685329 TTGAAAGCAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
5685394 ACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATGT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
5685459 CAGACACTTTAATGGCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
5685524 GTTCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
5685589 TCATGTGCGCTCACCCCCCCAG-CCCCCCGATCGCCGGAAACCCAACGTCGCCGGTCAGGTTCTC
714 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * * *
5685653 CGGCGATGCTCCGACGATGGTGCCCAGGCGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCA
779 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * *
5685718 GCATGTACTGCTAG-AACCATCGATCCGATCTGATCTTAGACTGGGAATGAACTCCGTATG
844 GCATGTGCTGC-CGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5685778 CTTAGACTTGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
5685843 CGACCAGAGGGTCGGGATGGGGAAGTCGGGGATCGATCTGGTCCCCCTCTGCGTGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* *
5685908 TGCTGCCGCAACCCT-TAGTTTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
131 TGCTGCCGCAACCCTCGA-TTCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
5685971 AACCGGCGAAACGA-------ACGGGCGGGCGAGCACTACGCTGGCCAGAGAGACAGGATGCGCA
194 AACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
5686029 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATGCCACTGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* *
5686094 ATTTTTATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTCCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * ** *
5686159 CAACTCGTTTTGTATTTTTCACGATTTTTGAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
5686224 T--GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTGGCACGCACAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
5686287 AAAATTCAGCTAAAAAATCAAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTG--------T
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
5686344 ----CAC-----TGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
5686400 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCACACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
5686465 TCATGTGCGTACA-CCCCCCAGCTCCCCCAATCGTCGAAACCCCAATGCCGTCGGTCA-----T-
714 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * *
5686523 ----G-TTCTCCGACGATGGTGCCCTGACGAAGAAAAATTCGGCACCAGCACATGCCCGAGCCCA
779 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * * * *
5686583 ACATGTGCTGTCACAAGCCTCGGTCCAGTCGGATCTTAGACTGGGAATGAACTTCGTATG
844 GCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5686643 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** * *
5686708 CGGCTAGAGGGGCGAGATGCGTAAGTCGAGGATCGGCCGGGTGCCCCTCTGCGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * ** *
5686773 TGCTGTCGCAACCCTC-AGTCTGGTCTGATCTTAGATTGGGAATGAACTTCGTAAACCTCAGCCA
131 TGCTGCCGCAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
5686837 ACCGATGAAACGAGTGGGC--AGGG-GGGCTGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
195 ACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * * ***
5686899 GCCGCGGATCGATATGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTTTATGTGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
5686964 TTTTTATGGCTTGTAAATTCGTACGATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGGAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
5687029 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTGGGGATTTTTTAAAAATTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT-AAAATTTTT
* * *
5687094 TTGGAAGAAGTTTTGGCCCCAAACTT-TTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
** * *
5687158 AAAATTCAGCTAAAAACTCGAACAGTACAAGATTTTGTGACCAATTGAAAAATGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
5687223 CAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
5687288 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
5687353 TCATGTGCGCACACCCCTCCCGGCCCCCCCGATCGCCAGAACCCCAATGCCCTCGGTCAGGTTTT
714 TCATGTGCGCACACCCC-CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
** * * * ** * *
5687418 TTGGCGCTGCTCCGGCGATGTTGCCCCGATAAAGAAAAATGTGGCACCAGCACATGCTCGAGCCC
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * *
5687483 AGCATGTGCTGCCGCAACCCTTGGTCCAG-CTAAATCTTAGACTAGGAATGAACTCTGTATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
5687544 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAACGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
5687609 CGGCCAGAGGGGCGGGATGTGCAAGCCTGGGATCG-GCTGGGTCCCCCTCTGTC-TGCTGCTGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTG-CGTGCTGCCGAT
* * *
5687672 CCTACTGCCG--ACACCTCG-GTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
129 CCTGCTGCCGCAAC-CCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
** * **
5687734 CCAACCGATTAAACGAGC--G-GGCGGGTGGGCGGGCACTACATCGGCCAGAGAGACGGGATGCG
192 CCAACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * * *
5687796 CAAGCCGTCGATCGATAGGGTGCTAGGTGGGTGTAGGCACATCTTCATATTTATGCATGCCAATG
257 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* *
5687861 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAA
322 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * *
5687926 GATGACTCGTTTTGTATTTTTCACGATTTTTGAAGCTTTTTATGGTTCAGGATTTTTTAAAATTT
387 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * *
5687991 TTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAGGCATGATCCTTGTATTTTTTTTGGCATGCA-A
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
5688055 AAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAGAGTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
5688120 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTAT
582 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
5688185 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAATTACCAGCACTCATCGCA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * **
5688250 CATCATGT--G--CA----CGC-ACACCCCCGATCGCCTGAACCCCAATGCCACCGGTCAGGTTC
712 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
** * * *
5688306 TCCGGCGATGCTCCGGTGATGGTGCCCCGACGAATAAAAATGCGGCACCAGCACATGGCCAAGCC
777 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * *
5688371 CAGCATGTGCTGTCGCAACCCTTGATCCAGTTTGATCTTAGGCTGGGAATGAACTCCGTATG
842 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5688433 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACCCATGAAACGAGCGTGCGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * * *
5688498 TGGCCAGAGGGGCAGGATGCACAAGCCGGGGATTGGTCGGGTCCCACTCTACGTGCTACTGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * *
5688563 TGCTACCGTAACCTTCG-GTCTGATCTGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
5688626 ACCGATGAAATGAGC-GGC--CGGGCAGGCGGGCACTACGTCAGCCAGAGAGGCGGGATGCGCAA
195 ACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
5688688 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
5688753 TTTTTATGGCTTCTAAATTCATGCACTGGTCCCTTAAGCCTTTACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
5688818 GACTCCTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * ** * *
5688883 CGAAAGG-GTTTCGGCCATAAACTTGGTCGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAA
* *
5688947 AAAATTCAGCTAAAAACTCGAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTC
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * *
5689012 CAGATACTTTATTGGCTACTGGCAGCAAACGTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
5689077 GTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-CTGCAC
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCAC
* * * *
5689141 ATCATGTGCGCACA-CCCCCTGGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAGGTTCT
713 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * *
5689205 CCGGTGATGCTTCGACGATGGTGCCCTGGCGAAGAAAAATGCAGCACCAGCACATACCCGAGCCC
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* ** * * *
5689270 AGCATGTGCTGCC-TAACCCTCGGTCCTATCTGATATTAGATTGGCAATGAACTCCGTATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5689330 CTTAGACTGGGAATGAACTCCATACGCCTAAGTCAACCCACGAAACGAGCGTGCGGGGGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** *
5689395 TGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGA-CTGGGTCCTCCTCTATGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * *
5689459 C-GACTGCTGCAGCCCTCGGTCCGGTCCGGTCTTAGACTGGGAATGAACT-CGTATGCCTAAGCC
130 CTG-CTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
*
5689522 AACCAACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
194 AACCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *** * *
5689587 AAGCCATGGATCGATAGGGTGGTATGTGGGTTTAGATGCATCATCATATTTCTGCATACCAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
5689652 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGCTTCATGGTAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * *
5689717 ACGACTCGTATTT-TATTTTTCACGATTTTTGAAAGTCTTTGCGATTCGGGATTTTTTTAAATTT
388 ACGACTCGT-TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * *
5689781 TTTCAGAAGTATTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
5689846 AAAAAATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
5689911 TTCAAAAACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
5689976 GAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCAAAGTACCAGCACCCATCACA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
5690041 CATCATGTGCGCACACCCCCGCCGGCCCCCCCGGTCGCCGAAACCCTAATGCTGTCGGTCAGGTT
712 CATCATGTGCGCACACCCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* ** * *
5690106 CTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATACGGCACTAGCACATGCCCGAGC
776 CTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* *
5690171 CCAGCATTTGCTGCTGCAA-CC-C--T-C-G---G----T---C------TG-A-TCCG-AT-
841 CCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5690208 CTTAGACTGGGAATGAACTCCGTATGCCAAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * * *
5690273 CAGCTAGAGGAGCAGGATGCGCAAGCC-GGGATCGATCGGTTCCTCTTTTGTGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * * * *
5690337 TACTACCATAACCCTCG-GTCGGTCCGATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCTAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
5690401 CCGACGAAACGAGCGGGCGGACGGGC---C-GGCACTACTCCAGCCAGAGAGACAGGATGCGCAA
196 CCGACGAAACGAGCGGGCGG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
5690462 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTTCC-A--CCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
5690524 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTTAAGCCTTCACGTGAAGTCTCATGGCAGGA
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
5690589 CGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGTGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * ** * *
5690654 T-GAAAAGGATTTTTGGCCCCAAACTTGATAGATATGATCCTTGCATTTTTGTTGGCATGTACAA
454 TCG-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
5690718 AAAAATTCAGCTAAAAACTCGAAGTGTACGAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
5690783 TCAGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * ** * **
5690848 AGTTCTTGAGGTTTGATCAGGGATAGCAGGCAAATATAAGGGCCAAGTATGAGCACCCATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
** ** * * *
5690913 ATCATGTGCGCACACCCCTTCGGCCCTTCCGATCGTCGGAACCCCAATTCCGTCGGTC-GGGT-T
713 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
*
5690976 ----C--T-CT--GATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* ** ** * *
5691032 AACATGTGCTATCATAACCCTCGGTCAGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5691093 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** *
5691158 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCTTCTCTGCGTGCT-CGTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC-CGATC
* * * * *
5691222 TTGCTGCCGCAACCCT-GAATCTGGTCTAATCCTAGACTGGGAATGAACTCCGCATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5691286 AACCGACGAAACGAACGGGCGGGTGGGCCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
194 AACCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
5691351 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTGCATGCCAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
*
5691416 CATTTTTATGGCTTGCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * *
5691481 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTGGGGATTTTTTAAAATATT
388 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* *
5691546 TTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
5691611 AAAAATTCAGCTAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCTCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
5691676 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * ** * * * * *
5691741 AGTTCTTGAGGTTTGATGAAGGATACGGGGATATTATATGGGCTAAGCACCAGCACCCATTGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * *
5691806 ATCATGTGCACACA-CCCCCCGG-CCCCCTGATCGCTGGAACCCCAATGCCGCCTGTCAGGTTCT
713 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * *
5691869 CCGGCAATGCTCCGACGATCGTGCCCCGGCGAAGAAATATGCGGCACCAGCACATGCCCGAGCCC
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * ** * * *
5691934 AGCAAGTGTTGCCGCAACCCTCGGTCCAATCCGATCTAAGACTGGGAATGAACTCCGCATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5691995 CTTAGACTGGGAATGAACTCCGTCTGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
5692060 CGGCCTGAGAGGCGGGATTCGCAAGCTGGGGATCG-GCTGGGTCCCCCTCTGCATGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATC
** * * * * * *
5692124 CTATTGTCGTAACCCTCTG-TCCGGTCCGATCTTATACTTGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTC-GATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * *
5692188 AACTGATGAACCGA--GTG-GGAGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
194 AACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
5692250 AGCCGTGGATC-A-AGGGTGGTAGCTGCGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
5692313 ATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCGAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
5692378 CGACTCGTTTTATATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTCT-AAATTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT-TAAAATTTT
* * * * * *
5692442 TTTGGATGGAGTCTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTTGCATGCATAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
5692507 AAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCTCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5692572 TTAGACACTTTAATAGCTAC-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
5692636 AGTTCTTGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTATCAGCACCAATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
** * * *
5692701 ATCATGTGCGCACACCTGCCCGGCCCCCCCCGATCGACGAAACCCCAATGCCGCCGGTCAGGTTC
713 ATCATGTGCGCACACCCCCCCGG-CCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * * *
5692766 TCTGGCGATGCTCCGGCGATGGTGCCGCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGCC
777 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * *
5692831 CAGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGAGAATGAACTCCGTATG
842 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
5692893 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * *
5692958 CGGCCAGAGGGGCGGGATGCACAAGTTGGGGATTGACCGGGTCCCCCTTTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * * * *
5693023 TATTGCCACCACCCTCG-GTCTGGTCTGATCTTAGACAGGGAATAAAGTCCATATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGATTC-GGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
5693087 ACTGACGAAACGAGC---AGGAGGGCGGGCGGGCACTGCGTCGGCCAGAGAGATGGGATCCGTAA
195 ACCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
5693149 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCC-A--CCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
5693211 TTTTTATGGCTTGTAAATTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
5693276 GACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCTGTGATTTTTTTAAAAAATT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGGA-TTTTTT--AAAATT
* *
5693341 TTTTCAGAAGGAGTTTTGGCCCCAAAC-TGGTAGACATGATCCTTGGTAATTTTTTGTTGGCATG
451 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT-GT-A-TTTTTGTTGGCATG
*
5693405 CACAAAAAAATTCAGCT-AAAACTCGAAGTGTGCAAGATTTTGTGACCATTTG-AAAAAGTGT-C
513 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * * *
5693467 CCATTTTAGACACTTTAAT-GCTACTGGCAGTAAACC-ATAAAATCTCAAATGCTCTTTAAGAGG
578 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
5693530 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGCC-AGTACCAG-ACCCAT
643 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* ** * * * *
5693592 CGCAAATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCATCGAAACACCAATGCTG-CATGTCA
708 CGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCA
* * * * * *
5693655 GGTTCTCTGGCGATGCTCCGGCGATGGCGCCCCGGCGAAGAAAAA-GCAGCACCAGCACATGCTC
772 GGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCC
* * * * *
5693719 GAG-CCATGCATGTGTTGCAGCAACCCTCGATCCGGTCTGATTTTAGACTGGGAAAGAACTCCGT
837 GAGCCCA-GCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGT
5693783 ATG
901 ATG
* ** **
5693786 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTATGGGCGCTCATT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
5693851 CGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATC-AGCTGGGTCCCACTCTACGTTCAT--CGAA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGC-TGCCG-A
* * * *
5693913 TCCTACTGTCGCAACCCTCGATTCGGTCTGATCTTAGACAGGGAATGAACTCCGTACGCCTAAGC
128 TCCTGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
5693978 CAACCAACGAAACGATCGGGCGGCTGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCG
193 CAACCGACGAAACGAGCGGGCGGC-GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * ** *
5694043 TAAGCTGCAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
257 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
*
5694108 ACATTTTTATGGCTTGTAAATTCATACAA-GGT-CCTTAAGCCTTCACGTGAAGTTTCATGGCAA
322 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
5694171 GATGACTCGTTTTCTATTTTTCAACGATTTTTGAAAACTTTTT-TGGTTCGGGATATTTTAAAAT
387 GACGACTCGTTTTCTATTTTTC-ACGATTTTTG-AAACTTTTTACGGTTCGGGATTTTTTAAAAT
*
5694235 TTTTTCGAAAGGAG-TTTGGCCCCAAAACTTGGTAGACGTGATCCCTTGTATTTTT-TGTGGCAT
450 TTTTTCGGAAGGAGTTTTGGCCCC-AAACTTGGTAGACGTGAT-CCTTGTATTTTTGT-TGGCAT
* * *
5694298 GCACAAAAAAATTCAGCT-AAAACTCAAAGTGTACAAGATTTTCTGACCATTTGAAAAAATTGTC
512 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-
*
5694362 CTCCCATTTTAGACACTTTAAT-GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
576 C-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
5694426 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
640 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
*
5694491 CATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCG-CTGG
705 CATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GG
* * *
5694555 TCAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATT
769 TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* ** * * *
5694620 CCCGAGCCTAGCATGTGCTATCGCAACCCTCGATCCCGTCTGATCTTAGACTGGGAATGAACTTC
834 CCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
5694685 GTATG
899 GTATG
* * * * ** * *
5694690 CTTAGATTGGGAATGAACTCCATATGCCTAAGTTAACCCATGAAACGAGTATGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
5694755 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CTGGGTCCCACTCTACGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTGCGTGCTGCCGATC
* * * * ** *
5694819 CTGCTGCCGCAACCCTTGATCCAGTTTGATCTTAGACTGGGAATGAACTCTTTACGCCTAAGCCA
130 CTGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
5694884 ATCGACGAAACGAGAGGGCGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* ** * *
5694949 AGCCGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATACT
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
5695014 ATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
5695079 CGACTCGTTTTATATTTTTTTACGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTAAAATTAT
389 CGACTCGTTTTCTA-TTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT-T
* *
5695144 TTT-GGAAGGAGTCTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCACA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
5695208 AAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
5695273 TTTAGACTCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
5695338 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTA--TG-A-ACA-C-C-
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * ** * * *
5695396 CATC----GCACACA-CCCCTCAACCCCCCCGATCGTCGGAACCCCAATGCCGTC-GTTAGCTTC
712 CATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
** * ** ** * ** * *
5695455 TATGGCGATACTCCGTTGATGGCACCACGGTGAAGAGAAATGCGGCACCAGCACATGCTCGAGCC
777 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * ** *
5695520 CAGCATGTGCTGTCGTAACCCTCGGTTTGAT-TCGATCTTAGACTGGGAATGAACTCCGTATG
842 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
5695582 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
5695647 CGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGTGT-CCCCTCTACGTGCCGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
*** * * * *
5695711 AATTGCCGCAACCCTCGATCCGGT-TCAATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTCGATTCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
5695775 ACTGACGAAACGAGCGTGCGGGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCACA
195 ACCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * ** * *
5695840 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAAAAACTTCATATTTCTGTGTGCTAATACC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
5695905 ATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGGCTTCACGTGAAGTTTCATGGCTAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* ** * * *
5695970 CGACTCGTTTT-TATTTTTCATGATTTTCAAAACTTTTTGCGGTCCGGGTTTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * *
5696034 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGAATGCAAAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
5696099 AAAATTCAGATAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
5696164 TAGA-ACCCTTAATGGCTGCTGGCTGCAAACCTGTAAAATCTCACATGCTCTTTAAGGGGGTGTG
584 CAGACA-CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
5696228 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
5696293 ATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCG-CTGGTCAAGTTC
713 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCAGGTTC
* *
5696357 TCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATTCCCGAGCC
777 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* ** * * *
5696422 TAGCATGTGCTATCGCAACCCTCGATCCCGTCTGATCTTAGACTGGGAATGAACTTCGTATG
842 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * ** * *
5696484 CTTAGATTGGGAATGAACTCCATATGCCTAAGTTAACCCATGAAACGAGTATGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
5696549 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCACTCTACGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * ** *
5696614 TGCTGCCGCAACCCTTGGTCCGGTTTGATCTTAGACTGGGAATGAACTCTTTACGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
5696679 TCGACGAAACGAGAGGGCGGGCGGACGGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCAA
196 CCGACGAAACGAGCGGGC-GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *** * *
5696744 GCCGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATACTA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* **
5696809 TTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACAGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
5696874 GACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCTGGATTTTTTTAAA-TTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * * ** * *
5696938 CAGAAGAAGTTTTGGTCCTGAACTTGGTAGATGTGATCCTTGTATATTTT-TTGGCATGCAAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAAA
5697002 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
5697067 TAGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAGA
584 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
5697132 GTTTTCGAGGTTTGATGAGGGATCGGGGTCCAATATAAGGGCCAGGTACCAGCACCCATCGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * *
5697197 TCATGTGTGCACAGCCCCCCTGGCCCCCCCGATCACCGGAACCCTAATGCCG-CTGGTCAGGTTC
714 TCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCAGGTTC
* * * * * *
5697261 TCCAGG-GATGCTTCGACGATGGTGCCCC-AGCGAAGAGAAATGCGACACTAGCACATTCCCAAG
777 TCC-GGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * * * * *
5697324 CCCAGCATGTGCTGCCGTAACCCTTGGTCCGATCTGATCTCAGATTCGGAATTAACTCCGTATG
840 CCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5697388 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * **
5697453 CGGCCAGAGGGGCAGGATGCGCAAGCCGGAGATCGATCGGGTCACCCTTTGCGTGCTGTTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * * * *
5697518 TGCTACCGCAACCCTCGATCCGGTCCAATCTTAGATTGGGAATGAACTCTGCATGCCTAAGACAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
5697583 CCGATGAAATGAGC--G-GACGGGCGGGCGGGCACTCCGCCGGCCAGAGAGACGGGATGCGCAAG
196 CCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * * *
5697645 TCGTGGATCGATACGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCATTGCCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
5697710 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * * *
5697775 ACTCATTTTCTATTTTTCATGATTTTTTAAACTTTTTACGGTTCAGGATTGTTTAAAATTTTTTT
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTT
* * * *
5697840 CGGAAAGAGTTTCGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGCATGCACAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
5697905 AAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCATTTC
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
** * *
5697970 AGACACTTTAAAAGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* **
5698035 TTCTCGAGGTTTCACAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* *
5698100 CATGTGCTCACACCCCCCCTGG-CCCCCCGATCGCCGGAACCCCAATGCC-ACTGGTCAGGTTCT
715 CATGTGCGCACACCCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCAGGTTCT
* * * * * * ** * *
5698163 CCGACGATGCTCCGATGATGATTCCCCGATGAAGAAAAATACGAAACCAGCACATTCCCGAGCCT
778 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** * * * *
5698228 AGCATGTGCTATCGTAACCCTTGGTCCTGTCTGATCTTAGACTGGGAATGAACTTCGTATG
843 AGCATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
5698289 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGTGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
5698354 CGGCCAGAGGGCCGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTACATGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * * * * *
5698419 TGCTGCCAAAACCTTCAATTTGATCTTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * *
5698484 TCGACGAAATGAGC---AGGC---C-GGCAGGCACTACACCGGCCAGAGAGACGGGATGCGCAAG
196 CCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * *
5698542 CCGTGGATCGATAGGGTGGTAGGTTGGTTCAGGCACATCTTTATATTTCTGCATGCCAATGCCAT
261 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* * * *
5698607 TTTTATGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGTAGGACG
326 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * **
5698672 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTT
391 ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTTT
* * * * *
5698737 CAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTTTTTTTTTTCGCATGCAC-AAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
5698801 AAATTCAGCTAAAAAAACTCGAAGTGTACAAGATTTT-TGACCATTTGAATAAAGTGTCCCCATT
520 AAATTCAGCT--AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5698865 TCAAACACTTTAAAGGCTAC-AGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
583 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
5698929 AGTTCTCAAGGTTTGACGAGGGATACGGGGCTAATA
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
5698965 ACTCCGTATG
Statistics
Matches: 14626, Mismatches: 1851, Indels: 591
0.86 0.11 0.03
Matches are distributed among these distances:
859 57 0.00
860 2 0.00
861 3 0.00
862 1 0.00
863 1 0.00
864 2 0.00
865 275 0.02
866 2 0.00
868 2 0.00
869 201 0.01
870 82 0.01
871 415 0.03
872 23 0.00
873 80 0.01
874 1 0.00
875 56 0.00
876 651 0.04
877 74 0.01
878 82 0.01
879 4 0.00
880 4 0.00
881 6 0.00
882 3 0.00
883 8 0.00
884 23 0.00
885 85 0.01
886 43 0.00
887 59 0.00
888 260 0.02
889 926 0.06
890 659 0.05
891 468 0.03
892 335 0.02
893 1022 0.07
894 190 0.01
895 383 0.03
896 440 0.03
897 733 0.05
898 672 0.05
899 379 0.03
900 654 0.04
901 1031 0.07
902 830 0.06
903 1125 0.08
904 1124 0.08
905 772 0.05
906 361 0.02
907 17 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
GCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
ATGTGCTGCCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:5684009 original size:26 final size:26
Alignment explanation
Indices: 5683973--5684028 Score: 103
Period size: 26 Copynumber: 2.2 Consensus size: 26
5683963 CCGATCCGAT
*
5683973 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5683999 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5684025 CTTA
1 CTTA
5684029 AGTCAACCCA
Statistics
Matches: 29, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 29 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5685781 original size:26 final size:26
Alignment explanation
Indices: 5685752--5685804 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5685742 CCGATCTGAT
5685752 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
* *
5685778 CTTAGACTTGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5685804 C
1 C
5685805 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5686653 original size:26 final size:26
Alignment explanation
Indices: 5686617--5686669 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5686607 CCAGTCGGAT
*
5686617 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5686643 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5686669 C
1 C
5686670 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5687556 original size:26 final size:26
Alignment explanation
Indices: 5687518--5687570 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5687508 CCAGCTAAAT
*
5687518 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
5687544 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
5687570 C
1 C
5687571 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:5688443 original size:26 final size:26
Alignment explanation
Indices: 5688407--5688459 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5688397 CCAGTTTGAT
*
5688407 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5688433 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5688459 C
1 C
5688460 CTAAGTCCAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5691096 original size:26 final size:26
Alignment explanation
Indices: 5691067--5691119 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5691057 CAGGTCCGAT
*
5691067 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5691093 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5691119 C
1 C
5691120 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5692005 original size:902 final size:902
Alignment explanation
Indices: 5681298--5698964 Score: 22089
Period size: 904 Copynumber: 19.8 Consensus size: 902
5681288 TCGATCCGAT
* * * * * *
5681298 CTTAGACTTGGAATGAACTTCGTATGCTTAAGTCAACCCATGAAACAAGCGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
5681363 TGGCCAGATGGGTGGGATGCGCAAGTCGGGGATCGATCGGGTCCCACTCTGCGTGCT-GCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGATC
* * * * * * * *
5681427 CTGCTGCCACAACCCTCGGTCCGGTCCGATCTTAGACCGGGAATGAAGTCTGTATGCATAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
5681492 ACCGACGGAACG-AGCGAGCGGGCGGGTGGGCGGGCACTACGTCAGCCAGAGAAACGGGATGCGC
195 ACCGACGAAACGAAG-G-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
** *
5681556 AAGTTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACTTCTTCATATTTCTGCATGCCAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
5681621 TATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
5681686 ACGACTCGTTTTTTATTTTTCACGATTTTTGAAACCTTTTACGGTTCAGGATTTGTTAAAATTTT
388 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTT
* ** * *
5681751 TTTCGGAAGAAGTTTTCTCCCCAAACTTGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCAAA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * * * *
5681816 AAAAAATTCAGCTAAAATCTCGAAGTGTA-TAGCATTCTGTTACCATTTGAAAAGAGTGTCCCCA
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAG-ATTTTGTGACCATTTGAAAAAAGTGTCCCCA
**
5681880 TTCCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
581 TTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* *
5681945 TGAGTTCTCGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCAC
646 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * **
5682010 ACATCATGTGCGCACACCCCCCTGG-CCCCCCGATCGTCGGAACCCTAGTGCCGTCAATCAGGTT
711 ACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTT
* * * *
5682074 CT-C--C---G----G-CGATGGTGCCCCGATGAAGAAAAATGCTGCACTAGCACGTGCCCGAGC
775 CTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* ** * * * * *
5682128 CCAACATGTGCTACCGTAACCCTCGGTCTGATCCGATCTTAGACTGGGAATGAACTCTGTATG
840 CCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
5682191 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * * **
5682256 CGGCCAGAGGGGCGGGATGCTTAAGACGGGGATCGATTGTGTCCCCCTCTACGTGCTATCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCGCGATCC
* ** * * * *
5682321 TGCTATCGTAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGACTAAGCCAA
131 TACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * * * ** *
5682386 CCGACGAAACGAGCGGGTGGGCGGGTGGGCGAGCATTACGCTAGCCAGAGAGCCGGGATGCGCAA
196 CCGACGAAACGA-AGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
**
5682451 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
5682516 TTTTTATGTCTTGTAATTTCAAACAATGGT-CCTTAAGCCTTCACGTGAAGTTTCATGGAAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * **
5682580 GACTCGTTTTCTCTTTTTCACGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTT-AAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * *
5682644 CAGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGAATTTTTGTTGGCATGCACAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
*
5682709 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGGAAAAAGTGTCCCCATTTT
520 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTT
* * *
5682774 AGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGTGGGTGTAAG
585 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
5682839 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATTAGGGCCAAGTGCCAGCACCCATCGCACAT
650 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * ** * * *
5682904 CATGTGCGCACACCGCCCCCGGGCCCCTCGATCATC-GACACCCTAATGCCGTCGGTCAGGTTCT
715 CATGTGCGCACA-C-CCCCCGGCCCCCCCGATCGCCGGA-ACCCCAATGCCGCCTGTCAGGTTCT
** * * ** *
5682968 CCGGCGATGCTCCGGGGATGGTGCCTCGGCGAAGAAAAATATGGCACCAGCACATGCCCGAGCCT
777 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** * * ** * *
5683033 AGCATGTGCTACCGTAACACTCAATTCGGTCTGATCTTAGACTGGGAATGAACTTCGTATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5683094 CTTAGACTGGGAATGAACTCCCTATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCACTGAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * * * * *
5683159 CGGCCAGAGGGCCGGGATATGCAAGACAGGGATCGATCGGGTCCCCCTCTGCATG-TTGCCGATA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGATC
* ** * *
5683223 CTGCTGCCATAACCCTCGTTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * ** * *
5683288 ACCGACAAAATGAGCGGGCAAGCAGGCGGGCGGGTACTACGCCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGA-AGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
*
5683353 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
5683418 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * * * *
5683483 CGAGTCGTTTTTTATTTTTCATGACTTTTGAAACTTTTTGCGGTTCTGGATTTTTCAAATTTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
5683548 TCTGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTTATTTTTGTTGGCACGTACAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCC-TTGTATTTTTGTTGGCATGCACAA
*
5683613 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGTCCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5683678 TCAGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTG
583 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
5683743 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * *
5683808 ATCATGTGCGCACACCCCCCTGGCCCCCCTGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTTT
713 ATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCT
* * * * * * *
5683873 TCGACGATGCTCCGACGATGGTGCCCTGGCGAAGAAATATGCGACACCAGCACATGCCTGAGCCC
777 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * *
5683938 AGCATGTGCTGCCGTAACCCTCGATCCGATCCGATCTTAGACTGGGAATGAACTCTGTATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
5683999 CTTAGACTGGGAATGAACTCCGTATGCTTAAGTCAACCCACGAAACGAGCGTGCGGGCGGTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
5684064 CGGCCAGAGGGGTGGGATGCGCAAGCTGAGGATCGGTCAGGCCCCCCTCTACATGCT-GCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGATC
* *** * * * * **
5684128 CTGCTATAGCAGCCCTCGGTCCGGTCCGATCTTGGTTTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * **
5684193 ACCGACGAAACGAGCGGGTGGGTGGGCGTGCGGGCACTACGACGGCCAGAGAGACGGGATGCTTA
195 ACCGACGAAACGA-AGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * * *
5684258 AGCCATGGATCGATAGGGCGGCAGGTGGATTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
5684323 ATCTTCATGGCTTGTAAATTCATACAATGGTCCCCTAAGCCTTCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * ***
5684388 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCTGTTCAAAATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * *
5684453 TTGGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCGTGCGCAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
5684518 AAAATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
5684583 TAGACACTTTAATGGCTACTGGCAGCAAACTTCTAAAATCTCAAAGGCTCTTTAAGGGGGTGTGA
584 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
5684648 GTTCTAGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
5684713 TCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
714 TCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTC
* ** * *
5684778 CGACGATGCT-C--C-A----G---C--C-AAGAAAAATATGGCACCAGCACATGCCCAAGCCTA
778 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * *
5684829 GCATGTGCTGCCGCAACCCTTGGTCCGGTCCGATCTTAGACTGGTAATGAA--CCATATG
843 GCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
5684887 CTTACACTGGGAATGAACTCTGTATGCCTAAGTCAACCAACGAAACGAGCGTGTGGGCACTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * *
5684952 CGACCAGAGGGGCAGGATGCGCCAAGCCGGGGATCGGCCGAGTCCCCCTCTGCGTGCT-GCCAAT
66 CGGCCAGAGGGGCGGGATGCG-CAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGAT
* * * *
5685016 CCTGCTGCCGCAACCTTCAATCTGGTCTGATCTTAGACTGGGAATGAACT-CG--T--CTAAGCC
129 CCTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5685076 AACCGACGAAACG-A------GTGGACGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCA
194 AACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* ***
5685134 AGCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * *
5685199 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATTAAGTTTAATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* ** * **
5685264 CGACTCCTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTTAGGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * * *
5685329 TTGAAAGCAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
5685394 ACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATGT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
5685459 CAGACACTTTAATGGCTACTAGCAGTAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
584 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
5685524 GTTCTCGAGGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
5685589 TCATGTGCGCTCACCCCCCCAG-CCCCCCGATCGCCGGAAACCCAACGTCGCCGGTCAGGTTCTC
714 TCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTC
* * * *
5685653 CGGCGATGCTCCGACGATGGTGCCCAGGCGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCA
778 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* * * * *
5685718 GCATGTACTGCTAG-AACCATCGATCCGATCTGATCTTAGACTGGGAATGAACTCCGTATG
843 GCATGTGCTG-TCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5685778 CTTAGACTTGGAATGAACTTCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
5685843 CGACCAGAGGGTCGGGATGGGGAAGTCGGGGATCGATCTGGTCCCCCTCTGCGTGCT-GTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGATC
* * **
5685907 CTGCTGCCGCAACCCT-TAGTTTGGT-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
130 CTACTGCCGCAACCCTCGA-TCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
5685970 CAACCGGCGAAACGAA-------CGGGCGGGCGAGCACTACGCTGGCCAGAGAGACAGGATGCGC
193 CAACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* *
5686028 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTGGGCACATCTTCATATTTCTGCATGCCACTGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
5686093 CATTTTTATGGCTTGTAAATTCATACAATGATCCCTTAAGCCTCCACGTGAAGTTTCATGGCAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * ** *
5686158 ACAACTCGTTTTGTATTTTTCACGATTTTTGAAACTTTTTGTGGTTCGAGATTTTTTAAAATTTT
388 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTT
* * * *
5686223 TT--GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTATATTTTTTTTGGCACGCACAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * *
5686286 AAAAATTCAGCTAAAAAATCAAAGTGTACAAGATTTTGTGGCCATTTGAAAAAAGTG--------
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
5686343 -T---CAC-----TGGCTACTTGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
583 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
5686399 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATCACAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * *
5686464 ATCATGTGCGTACACCCCCCAGCTCCCCCAATCGTCGAAACCCCAAT---GCC-GTC-GG-TCAT
713 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTC-T
* * *
5686523 -----G-TTCTCCGACGATGGTGCCCTGACGAAGAAAAATTCGGCACCAGCACATGCCCGAGCCC
777 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * * *
5686582 AACATGTGCTGTCACAAGCCTCGGTCCAGTCGGATCTTAGACTGGGAATGAACTTCGTATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5686643 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * ** * * *
5686708 CGGCTAGAGGGGCGAGATGCGTAAGTCGAGGATCGGCCGGGTGCCCCTCTGCGTGCT-GCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGATC
* * * * * ** *
5686772 CTGCTGTCGCAACCCTC-AGTCTGGTCTGATCTTAGATTGGGAATGAACTTCGTAAACCTCAGCC
130 CTACTGCCGCAACCCTCGA-TCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5686836 AACCGATGAAACG-A--GTGGGCAGGG-GGGCTGGCACTACGCCGGCCAGAGAGACGGGATGCGC
194 AACCGACGAAACGAAGGGCGGGC-GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * * * ***
5686897 AAGCCGCGGATCGATATGGTGGTAGGTGGGTTTAGGCACATTTTCATATTTTTATGTGCCAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * * *
5686962 CATTTTTATGGCTTGTAAATTCGTACGATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGGAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* *
5687027 ACGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTGGGGATTTTTTAAAAATTT
388 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTT-AAAATTT
* * *
5687092 TTTTGGAAGAAGTTTTGGCCCCAAACTT-TTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
** * *
5687156 AAAAAATTCAGCTAAAAACTCGAACAGTACAAGATTTTGTGACCAATTGAAAAATGTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
5687221 TTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* *
5687286 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGAGCCAAGTACCAGCACCCATCACA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
5687351 CATCATGTGCGCACACCCCTCCCGGCCCCCCCGATCGCCAGAACCCCAATGCC-CTCGGTCAGGT
712 CATCATGTGCGCACA-CCC-CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGC-CTGTCAGGT
* ** * * * ** * *
5687415 TTTTTGGCGCTGCTCCGGCGATGTTGCCCCGATAAAGAAAAATGTGGCACCAGCACATGCTCGAG
774 TCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * * * *
5687480 CCCAGCATGTGCTGCCGCAACCCTTGGTCCAG-CTAAATCTTAGACTAGGAATGAACTCTGTATG
839 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
5687544 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAACGTGTGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
5687609 CGGCCAGAGGGGCGGGATGTGCAAGCCTGGGATCG-GCTGGGTCCCCCTCTGTC-TGCT-GCTGA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCT-ACGTGCTCGC-GA
* * *
5687671 TCCTACTGCCG--ACACCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
128 TCCTACTGCCGCAAC-CCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
** * **
5687734 CCAACCGATTAAACG-A--GCGGGCGGGTGGGCGGGCACTACATCGGCCAGAGAGACGGGATGCG
192 CCAACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * * *
5687796 CAAGCCGTCGATCGATAGGGTGCTAGGTGGGTGTAGGCACATCTTCATATTTATGCATGCCAATG
257 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* *
5687861 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGATGTTTCATGGCAA
322 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * *
5687926 GATGACTCGTTTTGTATTTTTCACGATTTTTGAAGCTTTTTATGGTTCAGGATTTTTTAAAATTT
387 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * *
5687991 TTTCGGAAGGAGTTTTGGCCCCAAACTTAGTAGGCATGATCCTTGTATTTTTTTTGGCATGCA-A
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
5688055 AAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAGAGTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
5688120 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTAT
582 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
5688185 GAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAATTACCAGCACTCATCGCA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * *
5688250 CATCATGT--G--CA---CGC-ACACCCCCGATCGCCTGAACCCCAATGCCACCGGTCAGGTTCT
712 CATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCT
** * * *
5688307 CCGGCGATGCTCCGGTGATGGTGCCCCGACGAATAAAAATGCGGCACCAGCACATGGCCAAGCCC
777 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * * * *
5688372 AGCATGTGCTGTCGCAACCCTTGATCCAGTTTGATCTTAGGCTGGGAATGAACTCCGTATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5688433 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACCCATGAAACGAGCGTGCGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
5688498 TGGCCAGAGGGGCAGGATGCACAAGCCGGGGATTGGTCGGGTCCCACTCTACGTGCTAC-TGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCT-CGCGATC
* * * * * * * *
5688562 TTGCTACCGTAACCTTCGGTCTGATCTGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
5688626 ACCGATGAAATG-A--GCGGCCGGGCAGGCGGGCACTACGTCAGCCAGAGAGGCGGGATGCGCAA
195 ACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
5688688 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
5688753 TTTTTATGGCTTCTAAATTCATGCACTGGTCCCTTAAGCCTTTACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * *
5688818 GACTCCTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * ** * *
5688883 CGAAAGG-GTTTCGGCCATAAACTTGGTCGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC-ACAAA
* *
5688947 AAAATTCAGCTAAAAACTCGAAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTC
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * * * *
5689012 CAGATACTTTATTGGCTACTGGCAGCAAACGTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGA
584 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
5689077 GTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-CTGCAC
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCAC
* * * * * *
5689141 ATCATGTGCGCACACCCCCTGGCCCCCCCGATCGTCGAAACCCCAATACCGTCGGTCAGGTTCTC
713 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTC
* * * * * *
5689206 CGGTGATGCTTCGACGATGGTGCCCTGGCGAAGAAAAATGCAGCACCAGCACATACCCGAGCCCA
778 CGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
** * * *
5689271 GCATGTGCTG-C-CTAACCCTCGGTCCTATCTGATATTAGATTGGCAATGAACTCCGTATG
843 GCATGTGCTGTCGC-AACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
5689330 CTTAGACTGGGAATGAACTCCATACGCCTAAGTCAACCCACGAAACGAGCGTGCGGGGGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
5689395 TGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGA-CTGGGTCCTCCTCTATGTGCT-GTCGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTACGTGCTCG-CGAT
* * * * * *
5689458 CCGACTGCTGCAGCCCTCGGTCCGGTCCGGTCTTAGACTGGGAATGAACT-CGTATGCCTAAGCC
129 CCTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5689522 AACCAACGAAACGAGCGGGCAGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
194 AACCGACGAAACGA-AGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *** * *
5689587 AAGCCATGGATCGATAGGGTGGTATGTGGGTTTAGATGCATCATCATATTTCTGCATACCAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
5689652 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGCTTCATGGTAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * * *
5689717 ACGACTCGTATTT-TATTTTTCACGATTTTTGAAAGTCTTTGCGATTCGGGATTTTTTTAAATTT
388 ACGACTCGT-TTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * * *
5689781 TTTCAGAAGTATTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
5689846 AAAAAATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
5689911 TTCAAAAACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
5689976 GAGTTCTCGAGGTTTGATGAGGGATAGGGGCCCAATATAAGGGCAAAGTACCAGCACCCATCACA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * * *
5690041 CATCATGTGCGCACACCCCCGCCGGCCCCCCCGGTCGCCGAAACCCTAATGCTGTCGGTCAGGTT
712 CATCATGTGCGCACA-CCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTT
* ** * *
5690106 CTCCGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATACGGCACTAGCACATGCCCGAGC
775 CTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
*
5690171 CCAGCATTTGCTG-CTGCAA-CC-C--T-C-G---G----T---C------TG-A-TCCG-AT-
840 CCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5690208 CTTAGACTGGGAATGAACTCCGTATGCCAAAGTCAACCCACGAAACGAGCGTGTGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * * **
5690273 CAGCTAGAGGAGCAGGATGCGCAAGCC-GGGATCGATCGGTTCCTCTTTTGTGTGCT-GCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCGC-GATC
* ** * * * *
5690336 CTACTACCATAACCCTCGGT-CGGTCCGATCTTAGACTGGGAATGAACTCCGTTTGCCTAAGCTA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
5690400 ACCGACGAAACG-A--GCGGGCGGACGGGCCGGCACTACTCCAGCCAGAGAGACAGGATGCGCAA
195 ACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
5690462 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTTCC-A--CCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
5690524 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTTAAGCCTTCACGTGAAGTCTCATGGCAGGA
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCC-TTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* *
5690589 CGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGTGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * ** * *
5690654 T-GAAAAGGATTTTTGGCCCCAAACTTGATAGATATGATCCTTGCATTTTTGTTGGCATGTACAA
454 TCG-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
5690718 AAAAATTCAGCTAAAAACTCGAAGTGTACGAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5690783 TCAGACACTTTAATGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTG
583 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * ** * **
5690848 AGTTCTTGAGGTTTGATCAGGGATAGCAGGCAAATATAAGGGCCAAGTATGAGCACCCATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* ** * *
5690913 ATCATGTGCGCACACCCCTTCGGCCCTTCCGATCGTCGGAACCCCAAT---TCC-GTC-GG---T
713 ATCATGTGCGCACACCCC-CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCT
* * *
5690970 -CGG-G-TTCTCTGATGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
777 CCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
* * ** * *
5691032 AACATGTGCTATCATAACCCTCGGTCAGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
842 AGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5691093 CTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * * *
5691158 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCTTCTCTGCGTGCTCGTGATCT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCGCGATCC
* * * * *
5691223 TGCTGCCGCAACCCT-GAATCTGGTCTAATCCTAGACTGGGAATGAACTCCGCATGCCTAAGCCA
131 TACTGCCGCAACCCTCG-ATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
5691287 ACCGACGAAACGAACGGGCGGGTGGGCCGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGAA-GGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
5691352 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATATTTCTGCATGCCAATGCC
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
*
5691417 ATTTTTATGGCTTGCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
5691482 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTGGGGATTTTTTAAAATATTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* *
5691547 TCGGAAGGAGTTTTGGCCCCAAACATGGTAGACGTGATCCTTTTATTTTTGTTGGCATGCACAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* * *
5691612 AAAATTCAGCTAAAAACTCCAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCTCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
5691677 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGA
584 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * ** * * * * *
5691742 GTTCTTGAGGTTTGATGAAGGATACGGGGATATTATATGGGCTAAGCACCAGCACCCATTGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
5691807 TCATGTGCACACACCCCCCGG-CCCCCTGATCGCTGGAACCCCAATGCCGCCTGTCAGGTTCTCC
714 TCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTCC
* * * *
5691871 GGCAATGCTCCGACGATCGTGCCCCGGCGAAGAAATATGCGGCACCAGCACATGCCCGAGCCCAG
779 GGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG
* * * ** * * *
5691936 CAAGTGTTGCCGCAACCCTCGGTCCAATCCGATCTAAGACTGGGAATGAACTCCGCATG
844 CATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5691995 CTTAGACTGGGAATGAACTCCGTCTGCCTAAGTCAACCCACGAAACGAGCGTGCAGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
5692060 CGGCCTGAGAGGCGGGATTCGCAAGCTGGGGATCG-GCTGGGTCCCCCTCTGCATGCT-GCCGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTACGTGCTCG-CGAT
* * * * * *
5692123 CCTATTGTCGTAACCCTCTG-TCCGGTCCGATCTTATACTTGGAATGAACTCCGTATGCCTAAGC
129 CCTACTGCCGCAACCCTC-GATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * *
5692187 CAACTGATGAACCG-A--GTGGGAGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
193 CAACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* * *
5692249 AAGCCGTGGATC-A-AGGGTGGTAGCTGCGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* * *
5692312 CATTTTGATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCGAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* *
5692377 ACGACTCGTTTTATATTTTTCACGATTTTTGAAACTTTTTACGGTTCAGGATTTTTCT-AAATTT
388 ACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTT-TAAAATTT
* * * * * *
5692441 TTTTGGATGGAGTCTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTTGCATGCATA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* * *
5692506 AAAAAATTCAGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCTCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
5692571 TTTAGACACTTTAATAGCTAC-GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGT
582 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
5692635 GAGTTCTTGAGGTTTGATGAGGGATAGGTGGCCAATATAAGGGCCAAGTATCAGCACCAATCGCA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
5692700 CATCATGTGCGCACACCTGCCCGGCCCCCCCCGATCGACGAAACCCCAATGCCGCCGGTCAGGTT
712 CATCATGTGCGCACACC-CCCCGG-CCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTT
* * * * *
5692765 CTCTGGCGATGCTCCGGCGATGGTGCCGCGACGAAGAAAAATACGGCACCAGCACATGCCCAAGC
775 CTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGC
* * * *
5692830 CCAGCATGTGCTGCCGCAACCCTCAGTCTGGTCTGATCTTAGACTGAGAATGAACTCCGTATG
840 CCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
*
5692893 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
5692958 CGGCCAGAGGGGCGGGATGCACAAGTTGGGGATTGACCGGGTCCCCCTTTACGTGCTAC-CGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCT-CGCGATC
* * * * * * * * *
5693022 CTATTGCCACCACCCTCGGTCTGGTCTGATCTTAGACAGGGAATAAAGTCCATATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
5693087 ACTGACGAAACG-A--GCAGGAGGGCGGGCGGGCACTGCGTCGGCCAGAGAGATGGGATCCGTAA
195 ACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
5693149 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCC-A--CCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
5693211 TTTTTATGGCTTGTAAATTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
5693276 GACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCTGTGATTTTTTTAAAAAATT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTC-GGGA-TTTTTT--AAAATT
* *
5693341 TTTTCAGAAGGAGTTTTGGCCCCAAAC-TGGTAGACATGATCCTTGGTAATTTTTTGTTGGCATG
451 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT-GT-A-TTTTTGTTGGCATG
*
5693405 CACAAAAAAATTCAGCT-AAAACTCGAAGTGTGCAAGATTTTGTGACCATTTG-AAAAAGTGT-C
513 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* * *
5693467 CCATTTTAGACACTTTAAT-GCTACTGGCAGTAAACC-ATAAAATCTCAAATGCTCTTTAAGAGG
578 CCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
5693530 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG-CAATATAAGGGCC-AGTACCAG-ACCCAT
643 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
* ** * * * *
5693592 CGCAAATCATGTGCGCACACCCCCCGGCCCCCCCGATCATCGAAACACCAATGCTGCATGTCAGG
708 CGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGG
* * * * * *
5693657 TTCTCTGGCGATGCTCCGGCGATGGCGCCCCGGCGAAGAAAAA-GCAGCACCAGCACATGCTCGA
773 TTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * *
5693721 G-CCATGCATGTGTTG-CAGCAACCCTCGATCCGGTCTGATTTTAGACTGGGAAAGAACTCCGTA
838 GCCCA-GCATGTGCTGTC-GCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTA
5693784 TG
901 TG
* ** **
5693786 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTATGGGCGCTCATT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
5693851 CGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATC-AGCTGGGTCCCACTCTACGTTCATCG-AAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTACGTGC-TCGCGAT
* * * *
5693914 CCTACTGTCGCAACCCTCGATTCGGTCTGATCTTAGACAGGGAATGAACTCCGTACGCCTAAGCC
129 CCTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
5693979 AACCAACGAAACGATCGGGC-GGCTGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCG
194 AACCGACGAAACGA-AGGGCGGGC-GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * ** *
5694043 TAAGCTGCAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATG
257 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
*
5694108 ACATTTTTATGGCTTGTAAATTCATACAA-GGT-CCTTAAGCCTTCACGTGAAGTTTCATGGCAA
322 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * *
5694171 GATGACTCGTTTTCTATTTTTCAACGATTTTTGAAAACTTTTT-TGGTTCGGGATATTTTAAAAT
387 GACGACTCGTTTTCTATTTTTC-ACGATTTTTG-AAACTTTTTACGGTTCGGGATTTTTTAAAAT
*
5694235 TTTTTCGAAAGGAG-TTTGGCCCCAAAACTTGGTAGACGTGATCCCTTGTATTTTT-TGTGGCAT
450 TTTTTCGGAAGGAGTTTTGGCCCC-AAACTTGGTAGACGTGAT-CCTTGTATTTTTGT-TGGCAT
* * *
5694298 GCACAAAAAAATTCAGCT-AAAACTCAAAGTGTACAAGATTTTCTGACCATTTGAAAAAATTGTC
512 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-
5694362 CTCCCATTTTAGACACTTTAAT-GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
576 C-CCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
5694426 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
640 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
5694491 CATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCG-CTGG
705 CATCGCACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCT-G
* * *
5694555 TCAAGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATT
768 TCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATG
* * * * *
5694620 CCCGAGCCTAGCATGTGCTATCGCAACCCTCGATCCCGTCTGATCTTAGACTGGGAATGAACTTC
833 CCCGAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCC
5694685 GTATG
898 GTATG
* * * * ** * *
5694690 CTTAGATTGGGAATGAACTCCATATGCCTAAGTTAACCCATGAAACGAGTATGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
*
5694755 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CTGGGTCCCACTCTACGTGCTAC-CGAT
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATC-GGGTCCCCCTCTACGTGCT-CGCGAT
* * * * ** *
5694818 CCTGCTGCCGCAACCCTTGATCCAGTTTGATCTTAGACTGGGAATGAACTCTTTACGCCTAAGCC
129 CCTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5694883 AATCGACGAAACGAGAGGGCGGGCGGACGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
194 AACCGACGAAACGA-AGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGC
* ** *
5694948 AAGCCGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATAC
258 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGC
* *
5695013 TATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
5695078 ACGACTCGTTTTATATTTTTTTACGATTTTTGAAACTTTTTACAGTTCGAGATTTTTTAAAATTA
388 ACGACTCGTTTTCTA-TTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATT-
* *
5695143 TTTT-GGAAGGAGTCTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC
451 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* *
5695207 AAAAAAATTCAGCTAAAAACTTGAAGTGTACAAGATTTTGTGACCATTTGAAAAAGGTGTCCCCA
516 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
5695272 TTTTAGACTCTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTG
581 TTTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * * *
5695337 TGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTA--TG-A-ACA-C-C
646 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * ** * * * *
5695396 -CATC----GCACACACCCCTCAACCCCCCCGATCGTCGGAACCCCAATGCCGTC-GTTAGCTTC
711 ACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTC
** * ** ** * ** * *
5695455 TATGGCGATACTCCGTTGATGGCACCACGGTGAAGAGAAATGCGGCACCAGCACATGCTCGAGCC
776 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* ** *
5695520 CAGCATGTGCTGTCGTAACCCTCGGTTTGAT-TCGATCTTAGACTGGGAATGAACTCCGTATG
841 CAGCATGTGCTGTCGCAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATG
* * *
5695582 CTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGAAACGAGCATGCGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
5695647 CGGCCAGAGGGGCGGGATGCGCAAGCCAGGGATCGGTCGTGT-CCCCTCTACGTGC-CGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCGC-GATC
* * * * *
5695710 CAATTGCCGCAACCCTCGATCCGGT-TCAATCTTAGACTAGGAATGAACTTCGTATGCCTAAGCC
130 CTACTGCCGCAACCCTCGATCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5695774 AACTGACGAAACG-AGCGTGCGGGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCA
194 AACCGACGAAACGAAG-G-GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * * ** * *
5695838 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAAAAACTTCATATTTCTGTGTGCTAATA
257 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATG
* * *
5695903 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCGTTAAGGCTTCACGTGAAGTTTCATGGCTA
322 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* ** * * *
5695968 GACGACTCGTTTT-TATTTTTCATGATTTTCAAAACTTTTTGCGGTCCGGGTTTTTTTAAAATTT
387 GACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTT
* * *
5696032 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGAATGCAAA
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
5696097 AAAAAATTCAGATAAAAACTCGAAGTGTACAAGATTTTATGACCATTTGAAAAAAGTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
5696162 TTTAGA-ACCCTTAATGGCTGCTGGCTGCAAACCTGTAAAATCTCACATGCTCTTTAAGGGGGTG
582 TTTAGACA-CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
5696226 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
646 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
*
5696291 ACATCATGTGCGCACACCCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCG-CTGGTCAAGT
711 ACATCATGTGCGCACACCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCT-GTCAGGT
* *
5696355 TCTCCGGTGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATTCCCGAG
774 TCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAG
* * * * *
5696420 CCTAGCATGTGCTATCGCAACCCTCGATCCCGTCTGATCTTAGACTGGGAATGAACTTCGTATG
839 CCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * ** * *
5696484 CTTAGATTGGGAATGAACTCCATATGCCTAAGTTAACCCATGAAACGAGTATGCAGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *
5696549 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCACTCTACGTGCTAC-CGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCT-CGCGATC
* * * * ** *
5696613 CTGCTGCCGCAACCCTTGGTCCGGTTTGATCTTAGACTGGGAATGAACTCTTTACGCCTAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
5696678 ATCGACGAAACGAGAGGGCGGGCGGACGGGCAGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
195 ACCGACGAAACGA-AGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *** * *
5696743 AGCCGTGGATCGATTGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATACT
259 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* **
5696808 ATTTTTACGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCACAGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
5696873 CGACTCGTTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTCTGGATTTTTTTAAA-TTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTT
* * * ** * *
5696937 TCAGAAGAAGTTTTGGTCCTGAACTTGGTAGATGTGATCCTTGTATATTTT-TTGGCATGCAAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTAT-TTTTGTTGGCATGCACAA
5697001 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
5697066 TTAGACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGAG
583 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
5697131 AGTTTTCGAGGTTTGATGAGGGATCGGGGTCCAATATAAGGGCCAGGTACCAGCACCCATCGCAC
648 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
5697196 ATCATGTGTGCACAGCCCCCCTGGCCCCCCCGATCACCGGAACCCTAATGCCG-CTGGTCAGGTT
713 ATCATGTGCGCACA-CCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCT-GTCAGGTT
* * * * * *
5697260 CTCCAGG-GATGCTTCGACGATGGTGCCCC-AGCGAAGAGAAATGCGACACTAGCACATTCCCAA
775 CTCC-GGCGATGCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGA
* * * * * * * *
5697323 GCCCAGCATGTGCTGCCGTAACCCTTGGTCCGATCTGATCTCAGATTCGGAATTAACTCCGTATG
838 GCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * *
5697388 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
5697453 CGGCCAGAGGGGCAGGATGCGCAAGCCGGAGATCGATCGGGTCACCCTTTGCGTGCT-GTTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCG-CGATC
* * ** * * * *
5697517 CTGCTACCGCAACCCTCGATCCGGTCCAATCTTAGATTGGGAATGAACTCTGCATGCCTAAGACA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
5697582 ACCGATGAAATG-A--GCGGACGGGCGGGCGGGCACTCCGCCGGCCAGAGAGACGGGATGCGCAA
195 ACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
5697644 GTCGTGGATCGATACGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCATTGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
5697709 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
5697774 GACTCATTTTCTATTTTTCATGATTTTTTAAACTTTTTACGGTTCAGGATTGTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTT
* * * *
5697839 TCGGAAAGAGTTTCGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTTGCATGCACAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* *
5697904 AAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAATAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* ** * *
5697969 CAGACACTTTAAAAGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGCTGTGA
584 TAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* **
5698034 GTTCTCGAGGTTTCACAAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
5698099 TCATGTGCTCACACCCCCCCTGG-CCCCCCGATCGCCGGAACCCCAATGCC-ACTGGTCAGGTTC
714 TCATGTGCGCACA-CCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATGCCGCCT-GTCAGGTTC
* * * * * * ** *
5698162 TCCGACGATGCTCCGATGATGATTCCCCGATGAAGAAAAATACGAAACCAGCACATTCCCGAGCC
776 TCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
* * * * * *
5698227 TAGCATGTGCTATCGTAACCCTTGGTCCTGTCTGATCTTAGACTGGGAATGAACTTCGTATG
841 CAGCATGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
5698289 CTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGTGTGCGGGCGTTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
5698354 CGGCCAGAGGGCCGGGATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTACATGCTAC-CGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCT-CGCGATC
* ** * * ** * *
5698418 CTGCTGCCAAAACCTTCAATTTGATCTTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
130 CTACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * *
5698483 ATCGACGAAATG-A--GCAGGC---C-GGCAGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
195 ACCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
5698541 GCCGTGGATCGATAGGGTGGTAGGTTGGTTCAGGCACATCTTTATATTTCTGCATGCCAATGCCA
260 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* * * *
5698606 TTTTTATGGCTTGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGTAGGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * **
5698671 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTTTT
* * * * *
5698736 TCAGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTTTTTTTTTTCGCATGCAC-AA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
5698800 AAAATTCAGCTAAAAAAACTCGAAGTGTACAAGATTTT-TGACCATTTGAATAAAGTGTCCCCAT
519 AAAATTCAGCT--AAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * * *
5698864 TTCAAACACTTTAAAGGCTAC-AGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * * *
5698928 GAGTTCTCAAGGTTTGACGAGGGATACGGGGCTAATA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATA
5698965 ACTCCGTATG
Statistics
Matches: 14634, Mismatches: 1825, Indels: 627
0.86 0.11 0.04
Matches are distributed among these distances:
859 61 0.00
860 4 0.00
861 3 0.00
862 1 0.00
863 1 0.00
864 2 0.00
865 279 0.02
866 5 0.00
867 1 0.00
868 1 0.00
869 199 0.01
870 80 0.01
871 413 0.03
872 26 0.00
873 95 0.01
875 56 0.00
876 641 0.04
877 65 0.00
878 82 0.01
879 3 0.00
880 4 0.00
881 6 0.00
882 3 0.00
883 8 0.00
884 22 0.00
885 83 0.01
886 41 0.00
887 50 0.00
888 258 0.02
889 931 0.06
890 649 0.04
891 464 0.03
892 334 0.02
893 1017 0.07
894 200 0.01
895 389 0.03
896 445 0.03
897 734 0.05
898 670 0.05
899 379 0.03
900 665 0.05
901 1024 0.07
902 850 0.06
903 1112 0.08
904 1124 0.08
905 777 0.05
906 360 0.02
907 17 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (902 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTACGTGCTCGCGATCC
TACTGCCGCAACCCTCGATCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAAGGGCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTA
GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTCCGG
CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
TGTGCTGTCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:5692906 original size:26 final size:26
Alignment explanation
Indices: 5692867--5692919 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5692857 CTGGTCTGAT
5692867 CTTAGACTGAGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
*
5692893 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGAGAATGAACTCCGTATG
5692919 C
1 C
5692920 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGAGAATGAACTCCGTATG
Found at i:5693790 original size:26 final size:26
Alignment explanation
Indices: 5693761--5693812 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
5693751 CGGTCTGATT
5693761 TTAGACTGGGAAAGAACTCCGTATGC
1 TTAGACTGGGAAAGAACTCCGTATGC
*
5693787 TTAGACTGGGAATGAACTCCGTATGC
1 TTAGACTGGGAAAGAACTCCGTATGC
5693813 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.19, G:0.27, T:0.25
Consensus pattern (26 bp):
TTAGACTGGGAAAGAACTCCGTATGC
Found at i:5694715 original size:26 final size:26
Alignment explanation
Indices: 5694664--5694716 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5694654 CCCGTCTGAT
* *
5694664 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
5694690 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5694716 C
1 C
5694717 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5695592 original size:26 final size:26
Alignment explanation
Indices: 5695556--5695608 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5695546 TTGATTCGAT
5695556 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5695582 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5695608 C
1 C
5695609 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5696509 original size:26 final size:26
Alignment explanation
Indices: 5696458--5696510 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5696448 CCCGTCTGAT
* *
5696458 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
*
5696484 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
5696510 C
1 C
5696511 CTAAGTTAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5698299 original size:26 final size:26
Alignment explanation
Indices: 5698263--5698315 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5698253 CCTGTCTGAT
*
5698263 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5698289 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5698315 C
1 C
5698316 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5699570 original size:668 final size:658
Alignment explanation
Indices: 5698304--5699626 Score: 1995
Period size: 668 Copynumber: 2.0 Consensus size: 658
5698294 ATTGGGAATG
** * *
5698304 AACTCCGTATGCCTAAGTCAACCCATGAAACAAGTGTGCGGGCGTTCAGCCGGCCAGAGGGCCGG
1 AACTCCGTATGCCTAAGTCAACCCACAAAACAAGAGTGCGGGCGCTCAGCCGGCCAGAGGGCCGG
* *
5698369 GATGCACAAGCCGGGGATCGATCGGGTCCCCCTCTACATGCTACCGATCCTGCTGCCAAAACCTT
66 GATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTACATGCTACCGATCCTGCTGCCAAAACCCT
** * * *
5698434 CAATTTGATCTTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAATCGACGAAATGAGCA
131 CAATCCGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
5698499 GGCCGGCAGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
196 GGCCGGCAGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
* * *
5698564 GTTGGTTCAGGCACATCTTTATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTGAATTCATA
261 GTGGGTTCAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
5698629 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATAGTAGGACGACTCGTTTTCTATTTTTCATGA
326 CAATGGTCCCTGAAGCCTTCACGTGAAGTTTCATAGCAAGACGACTCGTTTTCTATTTTTCATGA
* * *
5698694 TTTTTGAAACTTTTTGCGGTTCAAGATTTTTTAAAATTTTTTTCAGAAGGATTTTTGGCCCCAAA
391 TTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCAAAA
* * * *
5698759 CTTGGTAGACGTGATCCTTGTTTTTTTTTTCGCATGCACAAAAAATTCAGCTAAAAAAACTCGAA
456 CATGGTAGACGTGATCCCTGTATTTTTTCTCGCATGCACAAAAAATTCAGCT-AAAAAACTCGAA
*
5698824 GTGTACAAGATTTTTGACCATTTGAATAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACAGCA
520 GTGTACAAGATTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACAGCA
5698889 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGACGAGGGATA
585 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGACGAGGGATA
5698954 CGGGGCTAAT
650 -GGGGCTAAT
** *
5698964 AACTCCGTATGCCTAAGTCAACCCACAAAATGAGAGTGCGGGCGCTCAGCCGGCCAGAGGGGCGG
1 AACTCCGTATGCCTAAGTCAACCCACAAAACAAGAGTGCGGGCGCTCAGCCGGCCAGAGGGCCGG
** * * * * *
5699029 GATGCGTAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCTTGCTGCCACAACCCT
66 GATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTACATGCTACCGATCCTGCTGCCAAAACCCT
** * * *
5699094 CGGTCCGATCTAATCTTAGACTGGGAATGAATTTCGTATGCCTAAGCCAACCGATGAAACGAGCA
131 CAATCCGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
* **
5699159 GGCAGACGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
196 -G--G-C---C-GGCAGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
* *
5699224 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATTCCAATGCCATTTTTATGGCTTGTA
253 GGTGGTAGGTGGGTTCAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
* *
5699289 AATTCATACAATGGTCCCTGAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
318 AATTCATACAATGGTCCCTGAAGCCTTCACGTGAAGTTTCATAGCAAGACGACTCGTTTTCTATT
* * *
5699354 TTTCATGATTTTTGAAACTTTTTATGGTTCAGGATTTTTTAAAA-TTTTTTCGGAAGGAGTTTTG
383 TTTCATGATTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTG
* *
5699418 GCCCAAAACATGGTAGATGTGATCCCTGTATTTTTTCTGGCATGCACAAAAAAATTCAGCT-AAA
448 GCCCAAAACATGGTAGACGTGATCCCTGTATTTTTTCTCGCATGCAC-AAAAAATTCAGCTAAAA
* *
5699482 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA-TTCTAGACACTTTAAT
512 AACTCGAAGTGTACAAGATTTT-TGACCATTTGAAAAAAGTGTCCCCATTTC-AAACACTTTAAA
*
5699546 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTT
575 GGCTAC-AGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTT
*
5699611 GATGAGGGATAGGGGC
639 GACGAGGGATAGGGGC
5699627 CAACATAAGG
Statistics
Matches: 595, Mismatches: 56, Indels: 17
0.89 0.08 0.03
Matches are distributed among these distances:
660 169 0.28
661 1 0.00
663 1 0.00
664 1 0.00
666 28 0.05
667 104 0.17
668 291 0.49
ACGTcount: A:0.26, C:0.21, G:0.24, T:0.28
Consensus pattern (658 bp):
AACTCCGTATGCCTAAGTCAACCCACAAAACAAGAGTGCGGGCGCTCAGCCGGCCAGAGGGCCGG
GATGCACAAGCCGAGGATCGATCGGGTCCCCCTCTACATGCTACCGATCCTGCTGCCAAAACCCT
CAATCCGATCTAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCA
GGCCGGCAGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
GTGGGTTCAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
CAATGGTCCCTGAAGCCTTCACGTGAAGTTTCATAGCAAGACGACTCGTTTTCTATTTTTCATGA
TTTTTGAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTTTCAGAAGGAGTTTTGGCCCAAAA
CATGGTAGACGTGATCCCTGTATTTTTTCTCGCATGCACAAAAAATTCAGCTAAAAAACTCGAAG
TGTACAAGATTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAAAGGCTACAGCAG
CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGACGAGGGATAG
GGGCTAAT
Found at i:5701617 original size:26 final size:26
Alignment explanation
Indices: 5701588--5701640 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5701578 CCGGTCCGAT
5701588 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5701614 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5701640 C
1 C
5701641 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5703398 original size:26 final size:26
Alignment explanation
Indices: 5703369--5703421 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5703359 CCAGTCCGAT
5703369 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5703395 CTTAGACTGGGAATGGACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5703421 C
1 C
5703422 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5704300 original size:26 final size:26
Alignment explanation
Indices: 5704271--5704323 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
5704261 CTGGTCCAAT
5704271 CTTAGACTGGCAATGAACTCT-GTATG
1 CTTAGACTGGCAATGAACT-TAGTATG
*
5704297 CTTAGACTGGGAATGAACTTAGTATG
1 CTTAGACTGGCAATGAACTTAGTATG
5704323 C
1 C
5704324 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.28, C:0.17, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGCAATGAACTTAGTATG
Found at i:5704577 original size:902 final size:903
Alignment explanation
Indices: 5700711--5709462 Score: 9443
Period size: 903 Copynumber: 9.9 Consensus size: 903
5700701 CCGGTCCAAT
* *
5700711 CTTAGACTGGGAATGAAATCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
* * * ** * * * *
5700776 CGGCCAGAGGGGCGGGATGCGCAAGACAGAGATCAACTGGGACCCCCTCTGCATGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** * * * *
5700841 TGCTGCCGCAACCCTC-AGTTCAATCTAATCTTAGATTGGAAATGAACTCTGTAAGCCTAAGCCA
131 TGCTGCCGCAACCCTCGA-TCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
5700905 ACCGATGAAACGAGCGGGCGGGTGGGCGGGCGGGCTCTATGTCGGCCAGAGAGACGGGATGCGCA
194 ACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCA
* * * ** *
5700970 AGCCGTGGATCAATAGGGT-GTAGGTGGGTTTAGGCACATCCTCATATTTCTATGTGCAAATGCC
259 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
* * *
5701034 ATTTTCATGGCTTGTAAATTCATACAAGGGTTCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
5701099 CGACTCATTTTCTATTTTTCATGATTTTCAAAA-TTTTTACGGTTCGGGATTTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
*
5701163 TCGGAAGGAGTTTTGGCCCTCAAACTTGATAGACGTGATCCTTGTATTTTT-TCTGGCATGCACA
454 TCGGAAGGAGTTTTGGCCC-CAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCACA
*
5701227 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCAT
517 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
5701292 TTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
5701357 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCA
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
** * * * *
5701422 CATCATGTGCGCACACCCCCCAGGCCTGCCCAATCGTCGGAACCCCAATGCCGCCGGTTAGGTTC
712 CATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCTGGTCAGGTTC
* * * *
5701487 TCCGATGATGCTCCGAAGATGGTGCCCCGATGAAGAAAAATGTGACACCATCACATGCCCGAGCC
777 TCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
* * *
5701552 CAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
842 CAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
* * * *
5701614 CTTAGACTGGGAATGGACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-ATGTGAGCGTTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGA-GCGGGCGCTCAG
* * * *
5701678 CCGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCTTATGCGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* *
5701743 TTGCTGCCGCAACCCTCAATCCAGTCTCT-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGATCC-G-CTCTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
5701807 AACCGACGAAATGAGCAAGCGGACGGACGGACGGGCACTATGCCGGCCAGAGAAACGGGATGCGC
193 AACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGC
* * *
5701872 AAGCCATGAATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGC
258 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
5701937 CATTTTTATGGCTT-TCAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
323 CATTTTTATGGCTTGT-AAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* * * * *
5702001 GATGACTCGTTTTCTATTTTTCACGATTTTCAAAACCTTATGCGGTTAGGGAATTTTTAAAATTT
387 GACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTT
* * * * *
5702066 TTTCGGAAGGCGTTTTGGCCCCAAACTTTGTAGACGTGATCCCTTTTATTTTTGTTGGCATGAAT
452 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAT-CCTTGTATTTTTGTTGGCATGCAC
5702131 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
516 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
*
5702196 TTTAAGACACTTTAATGGCCACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
581 TTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * *
5702261 TGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACTCATCGC
646 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * * * *
5702326 ACATCATGTGTGCACACCCCCCAGGCCCGCCCGATCGTCGAAA-ACCAATACCG-TCGATCAGGT
711 ACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCT-GGTCAGGT
** * * * * * * *
5702389 TCTCCGGTGGTGCTTCGATGATGGTGCCCCGATGAAGAAAAATGCGGCACCATCGCTTGCCCGAG
775 TCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAG
* *
5702454 CCCAGCATGTGCTGTCGTAACCCTCGGTCTGGCCCGATCTTAGACTGG----G-A------ATG
840 CCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
* *
5702507 ---A-ACT-----TG------GTATGCCTAAGTCAATCCACGAAACGAGC-ATGCGGGCGTTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGA-GCGGGCGCTCAG
* * * * * * *
5702556 TCGGCCAGAGGGACGGGATGTGCAAGCCGAGGATCGGCCGGGTCCCCCTTTGCATGTTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * * * *
5702621 TTGCTGCCGCAACCCTTGGTGCGGTCTCATCTTTGACTGGGAATGAAGTCCGTATGCCTAAGTCA
130 CTGCTGCCGCAACCCTCGATCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * **
5702686 ACCGACGAAACAAGCCGACGGGCGGACGGGCGGGCGTTACGCCGACCAGAGAGACGGGATGCGCA
194 ACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCA
* *
5702751 AGCCATGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
259 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
*
5702816 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTCAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
5702881 CGACTCATTTTCTATTTTTCACGATTTTCAAACCTTTTTACGGTTTGGGA-TTTTTAAAATTTTT
389 CGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTT
*
5702945 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
5703010 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
5703075 AAGACACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
584 AAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
5703140 GTTCTAGAGGTTTGATGAGGAATAAGGGGCCAATATAAGGGCCAAGTACCAGCACTCATCGCATA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * ** * *
5703205 TCATGTTCGCACACCCCCCTGACCCTGCCGATCG-CGGGAACCCCAATGCCGTTGGTCAGGTTCT
714 TCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTC-GAAACCCCAATGCCGCTGGTCAGGTTCT
* * * *
5703269 CCTACGATGCTCCGACGATGGTGCCCTGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCT
778 CCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
** ** *
5703334 AGCATGTGCTG-CTAAAACCCTCGGTCCAGTCCGATCTTAGACTGGGAATGAACTCCGTATG
843 AGCATGTGCTGTC-GCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
* * * *
5703395 CTTAGACTGGGAATGGACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-ATGTGAGCGTTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGA-GCGGGCGCTCAG
* * * *
5703459 CCGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCTTATGCGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* *
5703524 TTGCTGCCGCAACCCTCAATCCAGTCTCT-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGATCC-G-CTCTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * * *
5703588 AACCGACGAAATGAAG-GGGCGGGCGGGCAGGCAGGCACTACGTC-AGCTAGAGATACGGGATGC
193 AACCGACGAAACG-AGCAGGCGGGCGGACGGGCGGGCACTACGCCGA-CCAGAGAGACGGGATGC
** * * * **
5703651 GCAAGCCGCGGATCGATCGGGTGGTAAGTGGGTTTAGGCACATATTCATATTTCTATGTGCCAAT
256 GCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAAT
5703716 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
321 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
5703781 AGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATT
386 AGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATT
* * *
5703846 TTTTCGGAAGGGGTTTTGGTCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCAC
451 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAC
* * * *
5703911 AAAAATATTCAGCTAAAAACTCAAAGTGTACAGGATTTTGTGTCCATTTG-AAAAAGTGTCCCCA
516 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* * *
5703975 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTTTTTAAGGGGGTG
581 TTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTG
* * *
5704040 TTAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAATTACCAGCACCCATCGC
646 TGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGC
* * *
5704105 ACATCATGTGCGCACACCCCCCGGGCCCCCCCGATCG-CCAAACCCCAATACCGCTGGTCAGGTT
711 ACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCTGGTCAGGTT
* * * * * *
5704169 CACCGGCGATGCTCTGGCGATGGTGCCCCTATGAAGAAAAATATGGCACCAGCACATGCCCGAGC
776 CTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
* ** * *
5704234 CCAGCATGTGTTG-CTTTAACCCTCGGTCTGGTCCAATCTTAGACTGGCAATGAACTCTGTATG
841 CCAGCATGTGCTGTC-GCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
** * *
5704297 CTTAGACTGGGAATGAACTTAGTATGCCTAAGTCAACCCACGAAACAAGCGAGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
* * * * * * * *
5704362 CGACCAGAGGGGCGAGACGGGCAAGCCGGGGATCAGCCGGGTCCCCCGCTGCGTGCTGTCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * *
5704427 TACTACCGCAACCCTCGATCCGCTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTCAGCCAA
131 TGCTGCCGCAACCCTCGATCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
*
5704492 CCGACGAAACGAGCAGGCGGGCGGACGGGCAGGCACTACGCCGACCAGAGAGACGGGATGCGCAA
195 CCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAA
* * *
5704557 GCCATTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCACATTTCTACATGCCAGTGCCA
260 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
* *
5704622 TTTTTATGGCTTGTAAATTCAAACAATGGTGCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** *
5704687 AACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTTTGGATTTTTTGAAATTTTTT
390 GACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTT
* * * *
5704752 CGGAAGGAGTTTTGTCCCCAAAGTAGGTGGACGTGATCCTTGTACTTTTT-TTGGCATGCACAAA
455 CGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAA
* *
5704816 AAAATTCAGCTAAAAACTCGAAATGTACAAGATTTCGTGACCATTTGAAAAAAGTGTCCCCATTT
519 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
5704881 AAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCGCAAATGCTCTTTAAGGGGGTGTGA
584 AAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * **
5704946 GTTCTCAAGGTTTGATGAGGGATAGGTGGCCAATATAAGCGCCAGGTACCAGCACCCAAAGCACA
649 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
** * * * * *
5705011 TCATGTGCAG-ACACCCCCCCCGCCCCCCCAATCGTCGGAACCCCAATGCCGCCGGTTATGTTCT
714 TCATGTGC-GCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCTGGTCAGGTTCT
* * * *
5705075 CCGACGATGCTCCGACGATGGTACCTCG-GGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
778 CCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
5705139 AGCATGTGCTGTCGCAACCCTCGGTC---T--G------G--T--C--TG-A-----TA--
843 AGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
* * * *
5705175 -TTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
** * *
5705239 CGGCCAGAGGGGTAGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCCGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * *
5705304 TGCTGTCGCAACCCTCTG-TCCGATCTAATCTTAGAATGGAAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTC-GATCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * *
5705368 ACTGAAGAAACAAGCGGGCAGGCAGACGGGCGGGCGAGCACTACGTCTG-CCAGAGAGACGGGAT
194 ACCGACGAAACGAGCAGGC-GG--G-CGGACGGGCGGGCACTACG-CCGACCAGAGAGACGGGAT
* * *
5705432 GCGCAAGCCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
254 GCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCA
* * * *
5705497 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTAAGCCTTCACATTAAGTTTCATAG
319 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* * ** **
5705562 CAAGATGACTTGTTTTCTATTTTTCACGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAA
384 CAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAA
* * * * *
5705627 CTTTTTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTATGTTGGCATGC
449 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
5705692 AAAAAAAAATTCAGCTAAAAACTCGGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGAGTCCC
514 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
*
5705757 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
579 CATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * * ** * * **
5705822 TGTCAGTTCTCCAGGTTTTATGACTGATAGGGGGCCATTATAAGGGCCAAATACCAAAACCCATC
644 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * *
5705887 TCACATCATGTGTGCACACCCCTCC-GACCCCCCCGATCATCGAAACCCCAATGCCG-TCGGTCA
709 GCACATCATGTGCGCACACCCC-CCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCT-GGTCA
* * * * *
5705950 GGTTCTTCGATGATGCTCCGGCGATGGTGCTCCGACGAAGAAAAATGTGGCACCAGCACATGCCC
772 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCC
5706015 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTAGG-AATGAACTCCGT
837 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACT-GGCAATGAACTCCGT
5706079 ATG
901 ATG
* * *
5706082 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
* * * * *
5706147 CGGCTAGAGGGGCGGGATGTGCAAGCTGTGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * ** * *
5706212 TGCTACCGCAACCCTCGGTTTGGTCTGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *
5706277 CCGATGAAAC-A--A--------G-CGGGCGGGCACTACGCCGGCCAGAGAGACAGGAT-CGCAA
195 CCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAA
* * * *
5706329 GCCGTGGATCGATAGGGTGGCAGGTGGGCTTAGGCACATCATCATATTTCTACATGCCAATGCCA
260 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCA
* * * *
5706394 TTTTTCTGGCTTGTAAATTAATACAATGGTCCCTCAAGCCTCCACGTGAAGTTTCATGGCAAGAC
325 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
5706459 GACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGTGGTTCGGGATTTTTTAAAATTGTTT
390 GACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATT-TTT
* * ** ***
5706524 T-GAAAGGCGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTGTTACCAT-TTGAAA
454 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
* ** ** * ** * * *** **
5706586 AAAGTGTC--C--CCATTTC--A--G-AC-A-CTTTAATGGCTACGGGCAGCAAA------CC-T
519 AAAAT-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCAT
* ** ** ** * ** * * * * *
5706633 GTAA-A-ATCTCAAAT-GCT-CT-TTA--AAGAGGTGTGAGTTCTC-GA-GGT-TTGATGAGGG-
582 TTAAGACA-CTTTAATGGCTACTGGCAGCAA-ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* ** ** * ** ** * *
5706687 AT-AG-----G-GG---G-CCA-ATATA-AGGGCCAAGTACCAGCACCCA-T--C-GCACATCAT
645 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCAC-CCA-
* **** * * * ** * * ****
5706735 GTGCGCACACCCCCCGGGTC-C-CCCCAATCACTG-AACCCCAATGCCGTCGGTCAGGTTC--T-
707 -T-CGCACATCATGTGCG-CACACCCC--CCA-GGCCCCCCCGAT--CGTC-G-AAACCCCAATG
* * * * * * ** * * *
5706794 CCGAC-GAT--GGTGCCCCGACAAAG----AAAAATGCAG-GCACC-----AG-CACATGCTCGA
762 CCG-CTGGTCAGGTTCTCCGACGATGCTCCGACGATG--GTGCCCCGATGAAGAAAAATG-T-G-
** * * * * * * * * * * *** *
5706845 GC-CCAGCATGTGCTGCCACAACCC-TC-GGTCCGGTCTG--ATCTTAGAGT-GGGAATGAACTT
821 GCACCAGCACATGC--CC-GAGCCCAGCATGTGCTGTC-GCAACCCTCG-GTCTGGTCCGATCTT
* * ** **
5706904 CATA-T-GC--TTAGACTGAGAATAAA
881 -AGACTGGCAATGA-ACTCCG--TATG
* * * *
5706927 CTTCGTA-T--G---------------CCTAAGTCAACCCACGAAACGAGTGTGCAGGCGCTCAG
1 CTTAG-ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAG
* * ** *
5706974 CTGGCCAGAGGGGCGGGATGTGCAAGTTGGGGATCGGCTGGGTCCCCCTCTGCGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATC
* * ** *
5707039 CTGCTACCGTAACCCTC-AGTTTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTGCCGCAACCCTCGA-TCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * *
5707103 AACCGACGAAAC-A--A--------G-CGGGCGGGCACTACGTCGGCCAGAGAGACAGGATGCGC
193 AACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGC
** * ***
5707156 AAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTGCCAATGC
258 AAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGC
* * * *
5707221 CATTCTTATGGTTTGTAAATTCATACAGTGGTCCCTTAAGCCTTCACGTGAAGTTTCACGGCAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* *
5707286 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGGGGTTCAGGATTTTTTAAAATTTT
388 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * * * *
5707351 TTCGGAAGGAGTTTTGCCCCCAAACTTAGAAGACGTGATCCTTGTATTTTTGTTGCCATGCAAAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
*
5707416 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATT
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
*
5707481 TTAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
583 TAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
5707546 AG-TCTTCGAGGTTTGATGCGGGATAGGGGGCCAATATAAGGGCCGAGTACCAGCACCCATCGCA
648 AGTTC-TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * *
5707610 CATCATGTGCGCACA-CCCCCTGGCGCCCCCGATCGTCGGAACCCCAATGCCG-TCGGTCAGGTT
712 CATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCT-GGTCAGGTT
* * ** *
5707673 CTCC-AGCGATGCTCTGACGATGGTGCCCTGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAG
776 CTCCGA-CGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAG
5707737 CCCAGCATGTGCTGTCGCAA-CC-C--T-T-G---G-TC-----C-GG---T---CT--G-AT-
840 CCCAGCATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
* * ** * * *
5707775 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGAAGGTGCTGAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
* * * * * * ** *
5707840 CAGCCAGAGGTGCGAGATGCGCAACCCGGGCAGCGGCTAGGTCCCCCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* *** * *
5707905 TGCTACCGCAACCCTCTG-TCTAATCCAATCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCA
131 TGCTGCCGCAACCCTC-GATCCGCT-CTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
5707969 ACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCATTACGCTGGCCATAGAGACGGGATGTGCA
194 ACCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCA
* * * * *
5708034 AGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAAAGCC
259 AGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCC
* *
5708099 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTTAGCCTTCACGTAAAGTTTCATGGCAAGA
324 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * * * * * *
5708164 AGATTCATTTTTTATTTTTCACAAATTTT-GAAACTTTTTGTGGTTCGAGATTTTTTTAAATTTT
389 CGACTCGTTTTCTATTTTTCAC-GATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
*
5708228 TTCGGAAGGAGTTTTGGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* * * * *
5708293 AAAAATTCAACTAAAAACTCGAAATGTAAAAGATTTCTTTTTTACCATTTGAAAAAAGTGTCCCC
518 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGA--T-TTTGTGACCATTTGAAAAAAGTGTCCCC
* * * * *
5708358 ATTTCAGACATTTTAATGGCTACTAGAAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGT
580 ATTTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* * * * *
5708423 GTCAGTTCTTGAGGTTTGATGAGTGATAGGGGG-CAATTATAAGGGCAAAGTACCAGCACCCATT
645 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAA-TATAAGGGCCAAGTACCAGCACCCATC
* * * * *
5708487 GCACATCATGTGCACACACCGTCCCCTGGCCCCCCCGATCGTCGGAACCCTAATGCCGCCGGTCA
709 GCACATCATGTGCGCACACC--CCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCTGGTCA
* * * * * *
5708552 AGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGGCGCTAGCACATGCCC
772 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCC
* * * * * * * * * *
5708617 AAGCCGAACATGTGCTGCCGTAACCCTCAGT-TCAGTCCGATCTTAGATTGGGAATGAACTTCGT
837 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCT-GGTCCGATCTTAGACTGGCAATGAACTCCGT
5708681 ATG
901 ATG
* * * *
5708684 CTTAGACTGGGAATGACCTCCGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
* * * * * ** *
5708749 CAGCCAGAGGGGCGGGATGTGCAAGCCAGGGATTGGCCGGGTCCTCCTCTATGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * * * *
5708814 TGCTGCCGCAACCCTTGGTCTGGTCTGATCTTAGACTGGGAATGAACACCATATGCCTAAGCCAA
131 TGCTGCCGCAACCCTCGATCCGCTCT-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** * * * * * *
5708879 CCGACGAAACAAGCAACCGGGTGGGCAGGCGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAA
195 CCGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAA
* * *
5708944 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCAAATATTT-TGCAAGCCAATGC
260 GCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC--ATATTTCTACATGCCAATGC
* *
5709008 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCCCGTCAAGTTTCATGGCAAG
323 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
5709073 ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCCGGATTTTCTAAAATTTT
388 ACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTT
* * * * *
5709138 TTTGGAAGGATTTTTTG-CCCAAACTTGGTATACGTGATCCTTGTATTTTTGTTGGCAAGCACAA
453 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
* **
5709202 AAAAAGTCAGAAAAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
518 AAAAATTCAG-CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
*
5709267 TTAAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
582 TTAAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
*
5709332 GAGTTCTCGACGTTTGATGAGGGATAGGGGGCCAAT-TCAAGGGCCAAGTACCAGCACCCATCGC
647 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT-AAGGGCCAAGTACCAGCACCCATCGC
* * * * * **
5709396 ACATCACGTGCGCACACCCCCCCGGCCCCCCCGATCGTCGGAACCCTAATGCCACCAGTCAGGTT
711 ACATCATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCTGGTCAGGTT
5709461 CT
776 CT
5709463 TGTATTTTTG
Statistics
Matches: 6615, Mismatches: 942, Indels: 582
0.81 0.12 0.07
Matches are distributed among these distances:
828 204 0.03
829 216 0.03
830 13 0.00
831 7 0.00
832 1 0.00
834 3 0.00
836 1 0.00
838 1 0.00
839 2 0.00
840 5 0.00
841 7 0.00
842 2 0.00
843 10 0.00
844 3 0.00
845 29 0.00
846 15 0.00
847 8 0.00
848 20 0.00
849 12 0.00
850 4 0.00
851 13 0.00
852 39 0.01
853 11 0.00
854 9 0.00
855 11 0.00
856 2 0.00
857 6 0.00
858 1 0.00
859 1 0.00
862 3 0.00
863 5 0.00
864 7 0.00
865 165 0.02
866 13 0.00
867 13 0.00
868 34 0.01
869 12 0.00
870 5 0.00
871 15 0.00
872 14 0.00
873 12 0.00
874 13 0.00
875 3 0.00
876 252 0.04
877 629 0.10
878 375 0.06
879 13 0.00
880 166 0.03
881 510 0.08
882 66 0.01
883 112 0.02
884 5 0.00
885 3 0.00
886 5 0.00
887 3 0.00
888 5 0.00
889 11 0.00
890 13 0.00
891 218 0.03
892 37 0.01
893 7 0.00
895 1 0.00
897 2 0.00
899 5 0.00
900 7 0.00
901 3 0.00
902 619 0.09
903 982 0.15
904 429 0.06
905 348 0.05
906 2 0.00
907 158 0.02
908 188 0.03
909 314 0.05
910 151 0.02
911 6 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (903 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGAGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTGCCGCAACCCTCGATCCGCTCTATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACGAGCAGGCGGGCGGACGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAG
CCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCAT
TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
ACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC
GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAA
GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
ATGTGCGCACACCCCCCAGGCCCCCCCGATCGTCGAAACCCCAATGCCGCTGGTCAGGTTCTCCG
ACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGC
ATGTGCTGTCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGCAATGAACTCCGTATG
Found at i:5706085 original size:26 final size:26
Alignment explanation
Indices: 5706056--5706108 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5706046 CTGGTCCGAT
5706056 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
5706082 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
5706108 C
1 C
5706109 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:5706923 original size:26 final size:26
Alignment explanation
Indices: 5706884--5706936 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5706874 CCGGTCTGAT
* * *
5706884 CTTAGAGTGGGAATGAACTTCATATG
1 CTTAGACTGAGAATAAACTTCATATG
*
5706910 CTTAGACTGAGAATAAACTTCGTATG
1 CTTAGACTGAGAATAAACTTCATATG
5706936 C
1 C
5706937 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.15, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGAGAATAAACTTCATATG
Found at i:5708297 original size:877 final size:869
Alignment explanation
Indices: 5706567--5709462 Score: 3535
Period size: 909 Copynumber: 3.3 Consensus size: 869
5706557 TGATCCTTGT
*
5706567 ATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACGGGCAGCAAACC
1 ATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
5706632 TGTAAAATCTCAAATGCTCTTTAAAGAGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
66 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * *
5706697 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGGTCCCCCCAA
131 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA
* * * *
5706762 TC-ACTGAACCCCAATGCCGTCGGTCAGG-T-T---C--T-C-CGACGATGGTGCCCCGACAAAG
196 TCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCGACGATGGTGCCCCGACGAAG
* * *
5706817 AAAAATGCAGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCCGGTCTG
261 AAAAATGC-GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCTG
*
5706882 ATCTTAGAGTGGGAATGAACTTCATATGCTTAGACTGAGAATAAACTTCGTATGCCTAAGTCAAC
325 ATCTTAGACT-GG---G------A-ATG---A-AC------T---C--CGTATGCCTAAGTCAAC
* * ***
5706947 CCACGAAACGAGTGTGCAGGCGCTCAGCTGGCCAGAGGGGCGGGATGTGCAAGTTGGGGATCGGC
364 CCACGAAACGAGCGTGCAGGCGCTCAGC-AGCCAGAGGGGCGGGATGTGCAA-CCAGGGATCGGC
* * *
5707012 TGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGTAACCCTCAGTTTGGTCTGATCTTAGACT
427 TGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCTGTCTGGTCTGATCTTAGACT
5707077 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACA--A------GCGGGCGGGCACTACGT
492 GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAGCACGGGGGGCGGGCGGGCACTACGT
*
5707134 CGGCCAGAGAGACAGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
557 CGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* * * *
5707199 TCATATTTTTGTGTGCCAATGCCATTCTTATGGTTTGTAAATTCATACAGTGGTCCCTTAAGCCT
622 TCATA-TTTTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * *
5707264 TCACGTGAAGTTTCACGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGGG
686 TCACGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCG
* * *
5707329 GTTC-AGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGCCCCCAAACTTAGAAGACGTGATCCT
751 GTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGCGCCCAAACTTGGTAGACGTGATCCT
* *
5707393 TGTATTTTTGTTGCCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
815 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* *
5707448 ATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACTGGCAGCAAACC
1 ATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
*
5707513 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG-TCTTCGAGGTTTGATGCGGGATAGGGGGC
66 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC-TCGAGGTTTGATGAGGGATAGGGGGC
* * *
5707577 CAATATAAGGGCCGAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCGCCCCCG
130 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCG
* * *
5707641 ATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCAGCGATGCTCTGACGATGGTGCCCTGGCG
195 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGATGCTC-GACGATGGTGCCCCGACG
*
5707706 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCAACCCTTGGTCCGGTC
258 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTC
* * *
5707771 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGAAGGTGCT
323 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCT
* * * * * * * *
5707836 GAGTCAGCCAGAGGTGCGAGATGCGCAACCCGGGCAGCGGCTAGGTCCCCCTCTGCGTGCTACCG
388 CAG-CAGCCAGAGGGGCGGGATGTGCAACCAGGG-ATCGGCTGGGTCCCCCTCTGCGTGCTGCCG
** ** *
5707901 ATCCTGCTACCGCAACCCTCTGTCTAATCCAATCTTAGATTGGGAATGAACTCCGTATGCCTAAG
451 ATCCTGCTACCGCAACCCTCTGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * *
5707966 CCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCATTACG-CTGGCCATAGAGACGGGATG
516 CCAACCGACGAAAC-AGCA--CGGG-GGGCGGGCGGGCACTACGTC-GGCCAGAGAGACAGGATG
* *
5708030 TGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAA
576 CGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTT-TGCGTGCCAA
* *
5708095 AGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTTAGCCTTCACGTAAAGTTTCATGGC
640 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGC
* * * * * * * *
5708160 AAGAAGATTCATTTTTTATTTTTCACAAATTTT-GAAACTTTTTGTGGTTCGAGATTTTTTTAAA
705 AAGACGACTCGTTTTCTATTTTTCAC-GATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAA
*
5708224 TTTTTTCGGAAGGAGTTTTGGGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
769 TTTTTTCGGAAGGAGTTTTGCGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
* * *
5708289 ACAAAAAAATTCAACTAAAAACTCGAAATGTAAAAG
834 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
* * * *
5708325 ATTTCTTTTTTACCATTTGAAAAAAGTGTCCCCATTTCAGACATTTTAATGGCTACTAGAAGCAA
1 A--T-TTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
5708390 ACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTCAGTTCTTGAGGTTTGATGAGTGATAGGGG
63 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * *
5708455 G-CAATTATAAGGGCAAAGTACCAGCACCCATTGCACATCATGTGCACACACCGTCCCCTGGCCC
128 GCCAA-TATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC--CCCCCGGCCC
* * *
5708519 CCCCGATCGTCGGAACCCTAATGCCGCCGGTCAAGTTCTCCGGCGATGCTCCGGCGATGGTGCCC
190 CCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCC-GCGATGCT-CGACGATGGTGCCC
* * * * * * *
5708584 CGACGAAGAAAAATGTGGCGCTAGCACATGCCCAAGCCGAACATGTGCTGCCGTAACCCTCAGTT
253 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-C--TT
* *
5708649 CAGTCCGATCTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGACCTCCGTATGCCTA
314 --G---G-TC-------CGG--T---C-T-G-AT-CTTAGACTGGGAATGAACTCCGTATGCCTA
* * *
5708714 AGTCAACCCACGGAACGAGCGTGCGGGCGCTTAGCCAGCCAGAGGGGCGGGATGTGCAAGCCAGG
357 AGTCAACCCACGAAACGAGCGTGCAGGCGCTCAG-CAGCCAGAGGGGCGGGATGTGCAA-CCAGG
* * * ** * *
5708779 GATTGGCCGGGTCCTCCTCTATGTGCTGCTGATCCTGCTGCCGCAACCCT-TGGTCTGGTCTGAT
420 GATCGGCTGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCT-GTCTGGTCTGAT
* * *
5708843 CTTAGACTGGGAATGAACACCATATGCCTAAGCCAACCGACGAAACAAGCAACCGGGTGGGCAGG
484 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-AGC-A-CGGG-GGGCGGG
5708908 CGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
545 CGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
**
5708973 TTAGGCACATCTTCAAATATTTTGCAAGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
610 TTAGGCACATCTTC--ATATTTTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * *
5709038 GTCCCTTAAGCCTTCCCGTCAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC
673 GTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTC
* * * **
5709103 AAAACTTTTTACGGTTCCG-GATTTTCTAAAATTTTTTTGGAAGGA-TTTTTTGCCCAAACTTGG
738 AAAACTTTTTGCGGTT-CGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGCGCCCAAACTTGG
* * * **
5709166 TATACGTGATCCTTGTATTTTTGTTGGCAAGCACAAAAAAAGTCAGAAAAAAAACTCGAAGTGTA
802 TAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG-CTAAAAACTCGAAGTGTA
5709231 CAAG
866 CAAG
* *
5709235 ATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCAGCAAACC
1 ATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* *
5709300 TATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGACGTTTGATGAGGGATAGGGGGCC
66 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
*
5709365 AAT-TCAAGGGCCAAGTACCAGCACCCATCGCACATCACGTGCGCACACCCCCCCGGCCCCCCCG
131 AATAT-AAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCG
* * *
5709429 ATCGTCGGAACCCTAATGCCACCAGTCAGGTTCT
195 ATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
5709463 TGTATTTTTG
Statistics
Matches: 1745, Mismatches: 193, Indels: 130
0.84 0.09 0.06
Matches are distributed among these distances:
864 3 0.00
865 156 0.09
866 2 0.00
867 1 0.00
868 1 0.00
870 1 0.00
876 6 0.00
877 288 0.17
878 6 0.00
879 4 0.00
880 173 0.10
881 195 0.11
882 1 0.00
883 114 0.07
884 3 0.00
885 1 0.00
887 4 0.00
889 2 0.00
890 3 0.00
891 62 0.04
892 27 0.02
893 2 0.00
900 2 0.00
902 1 0.00
905 46 0.03
906 2 0.00
907 156 0.09
908 7 0.00
909 316 0.18
910 152 0.09
911 8 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (869 bp):
ATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGA
TCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGCGATGCTCGACGATGGTGCCCCGACGAAG
AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCGGTCTGA
TCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAG
CAGCCAGAGGGGCGGGATGTGCAACCAGGGATCGGCTGGGTCCCCCTCTGCGTGCTGCCGATCCT
GCTACCGCAACCCTCTGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
CGACGAAACAGCACGGGGGGCGGGCGGGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTGCGTGCCAATGCCATTTTTA
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTAAAGTTTCATGGCAAGACGACTCG
TTTTCTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAG
GAGTTTTGCGCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
AGCTAAAAACTCGAAGTGTACAAG
Found at i:5708694 original size:26 final size:26
Alignment explanation
Indices: 5708658--5708710 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5708648 TCAGTCCGAT
* *
5708658 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5708684 CTTAGACTGGGAATGACCTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5708710 C
1 C
5708711 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.19, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5709897 original size:26 final size:26
Alignment explanation
Indices: 5709868--5709920 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5709858 CCGGTCTGAT
5709868 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
5709894 CTTAGACTAGGGATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
5709920 C
1 C
5709921 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:5710807 original size:26 final size:26
Alignment explanation
Indices: 5710771--5710823 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5710761 CCAGCCTGAT
*
5710771 CTTAGACTGGGAATTAACTCTGTATG
1 CTTAGACTGGGAATTAACTCCGTATG
5710797 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATTAACTCCGTATG
5710823 C
1 C
5710824 CAAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATTAACTCCGTATG
Found at i:5711703 original size:26 final size:26
Alignment explanation
Indices: 5711667--5711719 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5711657 CTGGTCCAAT
* *
5711667 CTTAGATTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5711693 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5711719 C
1 C
5711720 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5712226 original size:904 final size:902
Alignment explanation
Indices: 5709470--5716424 Score: 8629
Period size: 903 Copynumber: 7.8 Consensus size: 902
5709460 TCTTGTATTT
* *
5709470 TTGGTAGACGTGATCCTTGTA-TTTTTGTGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* * * * * * * *
5709534 GCATAAGATTTTGTGGCTATTTCAAAAAAAATCTCCCCATTTCAGACACTTTAATGGCGACTGGC
66 GTACAAGATTTTGTGACCATTT-GAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* * *
5709599 AACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTCTGATAAGGGAT
130 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
*
5709664 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCAGCC
195 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
* *
5709728 CCCCTGATCGTCAGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCAATGCTCCGACGATGGTGCC
260 CCCC-GATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* * * * *
5709793 CCGGCGAAGAAAAATACGGCACCAGCACATGCTCGAGCCCAGCATATGCTGTCGCAACCCTCGGT
324 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
* *
5709858 CCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTAGGG-ATGAACTCCGTATGCC
389 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-GGGAATGAACTCCGTATGCC
* * *** * *
5709922 TAAGTCAACCCATGAAATGAGTGTGCGGGCGCTCAGCCGATAAGAGGGGTGGGATGCGCAAGTCG
453 TAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCG
* * * * * * * * * * *
5709987 AGGATCCGCCGGGTCCCCCTCTGCATGCTATCGATTCTGCTACCGTAACCCTCAGTCTGATCTGA
518 AGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAACCCTCGGTCCGGTCTGA
* ** * * * *
5710052 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAATGAGCGGGCGGGTGGCCAG
583 TCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGG
* * * * * *
5710117 GCGGGCACAACGTCGGCCAGAGAGAGGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGGTGGG
648 GCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGG
* ** * * * *
5710182 TTTAGGCACATCTTCATATTTTTGTGTGCCGATGCCATTTTTATGTCTTGTAAATTCTTAAAATG
713 TTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
5710247 GTCCCTTAAGCCTTTACGTGAAGTTTCATGGCAGGACGACTCGTTTTCTAATTTTCACAATTTTT
778 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTC
* * * * *
5710312 GAAACATTTTACAGTTTGAGATTTTTTAAACTTTTTTCGGAAGGAGTTTTGGCCCCAAAC
843 AAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * *
5710372 TTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCACCTAAAAACTCGAATT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
* *
5710437 GTACAAGATTTTGTTACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCA
66 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
*
5710502 GCAAACCTGTAAAATCTCAAATGCTCTTTCAGGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
131 GCAAACCTGTAAAATCTCAAATGCTCTTT-AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
5710567 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
195 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCC
* ** * * *
5710632 ACCCCGATCATCGGAACCCCAATGCC-CCAGTCAGGTTCTTTGGTGATGCTCGGGCGATGGTGCC
260 -CCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* * * *
5710696 CC-AGTGAAGAAAAATGAGGCACCAGCACATGCCCAAGCCCAGCATGTGCTACCGCAACCCTCGG
324 CCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
5710760 TCCAG-CCTGATCTTAGACTGGGAATTAACTCTGTATGCTTAGACTGGGAATTAACTCCGTATGC
388 TCCGGTCC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * * * *
5710824 CAAAGTCAACCTATAAAATGAGCGTACGGGCGCTCAGCCAGCCAGAGAGGC-AGGATGCGCAAGT
452 CTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA-GATGCGCAAGT
* * ** * * *
5710888 CGAGGATTGGCCGGGTCCCCCTCTGCGTGCTATTGATCCTGCTGCTGCAACCCTTGGTCTGGTCC
516 CGAGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAACCCTCGGTCCGGTCT
* *
5710953 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-AA-TGA----GCGGGC
581 GATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGC
* ** *
5711010 GGGCGGGCACTATGCCGGTCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
646 GGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTG
* * *
5711075 GGTTTAGGCACATCTTCATATTTTTGCTTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
711 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
*
5711140 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTGGTTTTCTATTTTTCA-AGATT
776 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACA-ATT
* * * * * *
5711204 TTCGAAACTCTTTGCGGTTTGAGATTTTTTAAATTTTTTTCGGAA-AACATTTTAGG-ACCAAAC
840 TTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGA-GTTTT-GGCCCCAAAC
* * * *
5711267 TTGGTAGACATGATCCTTGTATTTTTTTTGGCATGTACAAAAAAAGTT-GGCTAAAAACTCGTAG
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA-TTCAGCTAAAAACTCGAAG
* * *
5711331 CGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCTACTGAC
65 TGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGC
* *
5711396 AGCAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGAT
130 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* *
5711461 AGGGGGCCAATATAAGGGCCATGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCTCGGC
195 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGC
* * * *
5711526 ACCCCCGATCGTCGGAACCCCAATGTCGCCTGTCAGGTTCTCCGTCGATGCTCCAACGATGGTGC
259 -CCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGC
*
5711591 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGG
323 CCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
* * * *
5711656 TCTGGTCCAATCTTAGATTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
388 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
** * *
5711721 TAAGTCAACCCATGAAACGAGCGTGTAGGCGCTCAGCCGGCCGGAGGGGCGAGATGTGCAAG-CT
453 TAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTC-
* * * * *
5711785 GGGGATTGGCTGGGTCCCCCTCTACGTGCTACCGATCCTGCTGCTACAACCCTCAGTCCGGTCTG
517 GAGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAACCCTCGGTCCGGTCTG
* * * *
5711850 ATCTCAAACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACAAGCGAGCGGGTGGGCG
582 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCG
* * * * *
5711915 GGCCGGCACTATGCCGGCCAGAGATACGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGGTGG
647 GGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGG
5711980 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
712 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * * *
5712045 GGTCCCTTAAGCCTTAAAGTGAAGTTTCATGGTAAGATGACTCGTTTTTTATTTTTCACAATTTT
777 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTT
* * * * * *
5712110 CAAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCAGAAAGATTTTTGGCCCAAAAA
842 CAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
*
5712171 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5712236 GTACAAGATTTTGTGACCATTTGAAATAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
66 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5712301 GCAAACCTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGATTTGATGAGGGATA
131 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
*
5712366 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCGGCC
196 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-C
* * * * ** * *
5712431 CCCCCAATCGCCAGAACCCAAAT---GCCA-TC-GG---T-C-AAG-TTCTCCGACAATGGTGCC
259 CCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* *
5712485 CCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAA-CC-C--T
324 CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT
*
5712546 -C-G---G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGCAATGAACTCCGTATGCCT
389 CCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * * * *
5712589 AAGTCAACCCATGAAACGAGCGTGCGGGCGTTCAGTCGGCCAGAGGGGCGGGATGCGTAAGCCCG
454 AAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAG-TCG
* * * ** * * * *
5712654 -GGATCGACCGGGTCCCCCTCTGCGAGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGATCTAA
518 AGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAACCCTCGGTCCGGTCTGA
* * * *
5712718 TATTAGA-TGAGGAATGAACTCTGTATGCCTAAGCCAACTGACGAAACGAGC-AGGCGGGCGGGC
583 TCTTAGACT-AGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGA-GCGGGCGGGC
* * * * *
5712781 GGGCGGGCACTACGTCGACGAGAGAGACGGAATGTGCAAGCCGTGGATCGATAGGGTGGTAGGTG
646 GGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTG
* * * *
5712846 TGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCCTATAAATTCATACAA
711 GGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
*
5712911 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATAATTT
776 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTT
** * * *
5712976 TTGAAACTTTTTGCGGTTCGAGATTTTTTGAAATTTTTTTC-GAAGGAGGTTTGGCCCCAAAC
841 TCAAAACTTTTTGCGGTTTGAGATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
5713038 TTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAGAACAATTCAGCTAAAAACTCGAAGT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5713103 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTAAGACACTTTAATGGCTACTGGCA
66 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* **
5713168 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTAAGTTCTTAAGGTTTGATGAGGGATA
131 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
5713233 GGGGGCCAATATAAGGGCCACA-TACCGGTACCCATCGCACATCATGTGCGCACACCCCCCCGGC
196 GGGGGCCAATATAAGGGCCA-AGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-
* ** * **
5713297 CCCCCCGATCGTCGGAA-CCCAATGCTGCTGGTCAGGTTCTCCGACGATGCTCCGGTGATGGTGC
258 CCCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGC
* * *
5713361 CCCGACGAAGAAACATGCGCCACCAGCACATGCTCC-AGCCCAGCATGTGCTGCCACAA-CC-C-
323 CCCGACGAAGAAAAATGCGGCACCAGCACATGC-CCGAGCCCAGCATGTGCTGCCGCAACCCTCG
5713422 -T-C-G---G----T---CT--G-AT----TCCG-AT-CTTAGACTGGGAATGAACTCCGTATGC
387 GTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
* * * * * * *
5713465 CTAAGTCAACCAATGAAACGAGTGTGAGGGCGCTCAACCGGCCAAAGGGGTGAGATGCGCTAGTC
452 CTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTC
* ** *
5713530 GAGGATCGG-TCGGGTCCCCCTCTGTGTGCTGTCGATCCTGCTG-TCGCAACCCTCGGTCCAGTC
517 GAGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCT-GCAACCCTCGGTCCGGTC
* *
5713593 TGATCTTACACTAGGAATGAACTCCGTATGCCTAAGCCAACCAACG--A-AA-CGAGCGGGCGGG
580 TGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGG
* * * *
5713654 CGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGTAAGCCATGGATCGATAGGGTGGTAGAT
645 CGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGT
* * * *
5713719 GGTTTTAGGCACATCTTCATATTTCTACGGGCCAGTGCCATTTTTTTGGCTTGTAAATTCATACA
710 GGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* *
5713784 ATGGTCCCTTAAGCCTTCACGCT-AAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGAT
775 ATGGTCCCTTAAGCCTTCACG-TGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAAT
* ** * * * *
5713848 TTTCATAACTTTTTAAGGTTTGGGTTTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCAAAC
839 TTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* *
5713912 TTGGTTGACGTGATCCTTGTA-TTTTTTTGGCATGCACAAAAAAATTCAGCTAAAGACTCGAAGT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
5713976 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
66 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* *
5714041 GCAAACCTCTAAAATCTCAAATGCCCTTTAA-GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
131 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* ** *
5714105 GGGGGCCAATATAAGGGCCATGTACTGGTACCCATCGCACATCATGTGCGCACACCCCCCCAGGC
196 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GGC
* * ** * **
5714170 CCCCCGATCGTCGGAA-GCTAATGCCGCTGGTCAGGTTCTCCGACGATGCTCCGGTGATGGTGCC
259 CCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCC
* **
5714234 CCGACGAAG-AAAATGCGCCACCAGCACATGCTCC-AGCCCAGCATGTGCTGCCTTAACCCTCGG
324 CCGACGAAGAAAAATGCGGCACCAGCACATGC-CCGAGCCCAGCATGTGCTGCCGCAACCCTCGG
** * *
5714297 TCCAATTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTGTATGCC
388 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * * *
5714362 TAAGTCAGCCTATAAAACGAGTGTGAGGGCGTTCAACCGGCCAGAGGGGCGAGATGCGCAAGTCG
453 TAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCG
* ** * * * * * *
5714427 GGGATCATC-GGGTCCCCCTCTACATGCTACCGATCCTGCT-ATCACAACCCTCGGGCTGGTCTG
518 AGGATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCT-GCAACCCTCGGTCCGGTCTG
* * * * *
5714490 ATCTTAAACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG--A-AA-CGAGCGGACGGGTG
582 ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCG
* * * * * *
5714551 GGCGGGCATTATGCCGACCAGAGTGACGGGATGCACAAGCCGTGGATCGATAAGGTGGTAGGTGG
647 GGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGG
* *
5714616 GTTTAGGCACATCTTCATATTTGTACGTGCCAATGCCATTTTTATGGCTTGTAAGTTCATACAAT
712 GTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* ** * * * *
5714681 GGTCCCTTAAGCCATCTTGTGAAGTTTCACGGCAAGACGAATCGTTTTCTCTTTTTCACGACTTT
777 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCAC-AATTT
* * * *
5714746 T-AAAACTTTTTACGGTTTGGGATTTTTAAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAAC
841 TCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
5714807 TTGGTAAAGGTGATCCTTGTATTTTTTTTGGCATGCTCAAAAAAATTCAACTAAAAACTCGAAGT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5714872 GTACAAGATTTTGTGACTATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
66 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * *
5714937 GCAAACCTATAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTCGAGATTTGATGAGGGATA
131 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
5715002 GGGGGCCAATATAAGGGCCAAGTACCGGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCC
196 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CC
* *
5715067 CCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
260 CCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCC
* * * * ** * * * *
5715132 CGACAAAAAAAAATACGACACCAGCACATGGTCGAGCCCAGCATGTACTGCCGTAAACCTTGGTC
325 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * * * *
5715197 TGGTCGGATCTTAGACTGGGAATGAACTCCATTTGCTTAGACTGGGAATGAAGTACGTATGCCTA
390 CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* **
5715262 AGTCAACTCGCGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGC-AGGATGCGCAAG-CTG
455 AGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGA-GATGCGCAAGTC-G
* * * * * * * * * *
5715325 GGGATCGG-TCGGGTACCCCTCTGCGTGTTGCCAATCCTGCTG-TCGCAAACTTCGATCGGGTCC
518 AGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCT-GCAACCCTCGGTCCGGTCT
*
5715388 GATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAATG-G-GCGGGCAG
581 GATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-AA-GCGAGCGGGCGG
* * *
5715451 ACGGGCAGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGA-GGATCGATAGGGTGGTAG
644 GCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCC-ATGGATCGATAGGGTGGTAG
* *
5715515 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
708 GTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * **
5715580 GAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
773 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAA
* * * *
5715645 TTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTTGGAAGGGGTTTTGGCCCCAACC
838 TTTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * **
5715710 TTGTTAGACGTGATCCTTGTATTATTGTTGGCATGCACAAAGCAATTCAGCTAAAAACTCGAAGT
1 TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
*
5715775 GTACAAGATTTTGTGACCATTTGAAAAAACTGTCCCCAATTT-AGACACTTTAATGGCTACTGGC
66 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC-ATTTCAGACACTTTAATGGCTACTGGC
*
5715839 AGCAAACCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
130 AGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT
* *
5715904 AGGGGGCCAATATAAGGGCGAAGTACCAGCA-CCATCGCACATCATGTGCGCACACGCCCCCCGA
195 AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGG
* * * * * * *
5715968 CCCTCTCGATCGCCGGAACTCCAATGCCATCAAAT-AGGTTCTCCGGCGATGCTCTGACGATGGT
258 CCC-CCCGATCGTCGGAACCCCAATGCC-GCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGT
** * * *
5716032 GCCCCGACGAAGAAAAATATGGCACCAGCACATGCTCGAGCGCAGCATGTGCTGTCGCAACCCTC
321 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* ** * * * ** *
5716097 AGTCTAGTCCAATCTTGGACTAGGAATGAACTTTGTATGCTTAGACTGGGAATGAACTTCGTATG
386 GGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * * * * *
5716162 CCTAAGTGAACCCATGAAACGAGCGTGTGGGCACTCAGCCGGCAAGAGGGGCAAGATGCGTAAGC
451 CCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGT
* * * *** *
5716227 CGAGGATCAG-TCGGGTCCCCCTCTGCGTGCTGCCGAT-CTCGCTACCATAACCCTCGGTCCGAT
516 CGAGGATCGGCT-GGGTCCCCCTCTGCGTGCTACCGATCCT-GCTGCTGCAACCCTCGGTCCGGT
* *
5716290 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATG--A-AA-CGA--------
579 CTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGG
* * *
5716343 ----GCGGGCACTATGCCGACCAGAGAGACGGGATGTGCAAGCCATGCATCGATAGGGTGGTAGG
644 GCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGG
5716404 TGGGTTTAGGCACATCTTCAT
709 TGGGTTTAGGCACATCTTCAT
5716425 GGCAAGACGA
Statistics
Matches: 5306, Mismatches: 622, Indels: 264
0.86 0.10 0.04
Matches are distributed among these distances:
866 7 0.00
867 657 0.12
868 14 0.00
869 6 0.00
870 3 0.00
871 47 0.01
872 161 0.03
873 144 0.03
874 244 0.05
875 5 0.00
876 5 0.00
877 75 0.01
878 175 0.03
879 1 0.00
880 1 0.00
883 2 0.00
884 1 0.00
887 4 0.00
888 75 0.01
889 2 0.00
890 2 0.00
891 1 0.00
892 2 0.00
893 71 0.01
894 99 0.02
895 743 0.14
896 539 0.10
897 138 0.03
898 157 0.03
899 87 0.02
900 7 0.00
901 5 0.00
902 118 0.02
903 874 0.16
904 819 0.15
905 15 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (902 bp):
TTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGT
GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCC
CCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCC
GACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC
GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
GTCAACCCATGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGAGATGCGCAAGTCGAGG
ATCGGCTGGGTCCCCCTCTGCGTGCTACCGATCCTGCTGCTGCAACCCTCGGTCCGGTCTGATCT
TAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCGAGCGGGCGGGCGGGCG
GGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTT
AGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTCAAA
ACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
Found at i:5714344 original size:26 final size:26
Alignment explanation
Indices: 5714308--5714360 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5714298 CCAATTCGAT
5714308 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5714334 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5714360 C
1 C
5714361 CTAAGTCAGC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5716956 original size:26 final size:26
Alignment explanation
Indices: 5716920--5716998 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
5716910 TCGGTTCGAT
5716920 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5716946 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5716972 CTTAGAGTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5716998 C
1 C
5716999 CTAAGTGAAC
Statistics
Matches: 52, Mismatches: 1, Indels: 0
0.98 0.02 0.00
Matches are distributed among these distances:
26 52 1.00
ACGTcount: A:0.27, C:0.19, G:0.28, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5720048 original size:904 final size:898
Alignment explanation
Indices: 5718158--5721210 Score: 4355
Period size: 895 Copynumber: 3.4 Consensus size: 898
5718148 TGGGAATTCA
*
5718158 TACAAGATTTTGTGACCATTTGAAAAAAGCGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
1 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
5718223 CAAACCTGTAAAATCTGAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
66 CAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
* * *
5718288 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGTACATCATGTACGTACACCCCCTGGCCCC
131 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCC
** * * *
5718353 CCGATCATCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGA-TACTGCTCCGATGATGGTGCCCC
196 CCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGA-TGCTCCGATGATGGTGCCCC
* * ** * *
5718417 AACGAAGAAAAATACGGCACCAGCACACGCCCGAGCCCAGCATGTGCTATCGTAACCCTCGGTTC
260 AGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAACCTCGGTCC
* * **
5718482 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACTGGGAATGAGCTGTGTATGCCTAA
325 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTACGTATGCCTAA
* * * *
5718547 GTCAACCCATGAAACGAATGTGCGGGCGCTCAGCCGGGCAGAGGGGCGGGATGCACAAGACGGGG
390 GTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGG
* * * * * * * * * * *
5718612 ATC-GATCGTGTCCCCCTTTGCCTGCTATCGATCCTACTGTCGCAACCTTCGATCCGGTCTGATC
455 ATCAGATCGAGTCCCCCTCTACGTGCTGTCGATCCTGCTCT-GCAACCCTAGGT-TGGTCTGATC
* * * * * *
5718676 TTAGACTGGTAATTAACCTGTACGCCTAAGCCAACCGACGAAACAAGCGGACGGGC--G-A-ACG
518 TTAGACTGGCAATGAACCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCG
* * *
5718737 GGCACTCCATCAGCCAGAGAGACGAGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTGGGTTT
583 GGCACTACATCAGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* *
5718802 AGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
648 AGGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
5718867 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAA
713 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAA
* *
5718932 ACTTTTTACGATTC-GATTTTTGAAAATTTTTTTAGAAGGAGTTTTGGCCCTAAACCTGGTAGAC
778 ACTTTTTACGGTTCAGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAA-CTGGTAGAC
* *
5718996 GTGATCCTTGTATTTTTGTTGGCATGCGTAAAACAATTCAGCTAAAAACTCAAAGAG
842 GTGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCAAAGTG
5719053 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
1 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
5719118 CAAACCTGTAAAATCTCAAATGCACTTTAATGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
66 CAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
*
5719183 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTAGCCCT
131 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCC-
* * *
5719248 CCCGATCGCCGGAACCCCAATGCCATCGATCAGGTTTTCCGGCGATGCTCCGATGATGGTGCCCC
195 CCCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCC
* * * * * * *
5719313 GGTGAAGAAAAATACGACACTAGCACATGCCCGAGGCCAGCATGTACTGCTGTAAACCTCGGTCC
260 AGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAACCTCGGTCC
* * * *
5719378 GGTCCGATCTTAGACTGGAAATGAACTCCATTTGCTTAGACTGGGAATAAACTACGTATGCCTAA
325 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTACGTATGCCTAA
* * * *
5719443 GTCAACCCATGAAATGAACGTGCGGGCGCTTAGTCGGCCAGAGGGGTGGGATGCGCAAGTCGGGG
390 GTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGG
* * * *
5719508 ATCAGACCGAGTCCCCCTCTACGTGTTGCCAATCCTGCTACTGCAACCCTAGGTTGGGTCTGATC
455 ATCAGATCGAGTCCCCCTCTACGTGCTGTCGATCCTGCT-CTGCAACCCTAGGTT-GGTCTGATC
* * *
5719573 TTAGACTGGGAATGAACTCCGTATGCCCAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGC
518 TTAGACTGGCAATGAAC-CTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGC
* * *
5719638 GAGCACTACGTCAACCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
582 GGGCACTACATCAGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * *
5719703 TAGGTACATCTTCATATTTCTACGTGCGAATGCCATTTTTATGGCATGTGAATTCATACAATGGT
647 TAGGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
* * * *
5719768 CCCTTAAGCCTCCACGTGAAGTTTCATGGCAAAATGACTCGTTTTTTATTTTTCATGATTTTTGA
712 CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGA
** * * * * *
5719833 AACTTTTTGTGGTTCGAGATTTTTTAAAATTTCTTCGGAAAGTGTTTTGGCCCTAAACTTGGTAG
777 AACTTTTTACGGTTC-AGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAAC-TGGTAG
*
5719898 ACTTGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCAAAGTG
840 ACGTGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCAAAGTG
*
5719957 TACAAGATTTTGTGACCGTTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
1 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
5720022 CAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
66 CAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
5720087 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCC
131 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGG-CCC
*
5720152 CCCGATCGCCGGAACCCCAATG-C-TCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCC
195 CCCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCC
* * * * *
5720215 GGTGAAGAAAAATACGGCACCAGCACATG-CCGAGCCCAGCATGTGCTGCCATAACCCTCGGTCT
260 AGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAACCTCGGTCC
* *
5720279 GGTCCGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAA
325 GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTACGTATGCCTAA
* * * * * * * *
5720344 GTCAACCCACGAAACGAGCGTGCGAGCCCTCAACCGGTCGGAGGGGCGGGATGTGCAAGAT-GGG
390 GTCAACCCATGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAG-TCGGG
* ** *
5720408 GATCA-ATCGAGTCCCCCTCTACGTGCTGTCGATCTTGCTGCCACAACCCTTGGTCTGGTCTGAT
454 GATCAGATCGAGTCCCCCTCTACGTGCTGTCGATCCTGCT-CTGCAACCCTAGGT-TGGTCTGAT
5720472 CTTAGACTGGCAATGAACCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGC-GGA
517 CTTAGACTGGCAATGAACCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGG-
* *
5720536 CGGGCACTACACCAGCCAGAGAAACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
581 CGGGCACTACATCAGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGT
* ** * *
5720601 TTTGGTACATCTTCATATTTCTTTGTGCCAATGCCATTTTTATGCCTTGTTAATTCATACAATGG
646 TTAGGTACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
5720666 TCTCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
711 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTG
* * *
5720731 AAACTATTTACGGTTCAAGATTTTTGAAAATTTTTTTGGAAGGAGTTTCGGCCCCAAAC---TAG
776 AAACTTTTTACGGTTC-AGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTGGTAG
* * * * ** * *
5720793 GCGTCATCCTTCTTTTTTTAATGGCATGCATAAAAAAATTCAGCTAAAAACTCGAAGTG
840 ACGTGATCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCAAAGTG
* *
5720852 TACAAGATTTTGTGACCATTTGAAAAAAGTG-CCTCCATTTCAGACACTGTAATGGCTACTGGCG
1 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCC-CCATTTCAGACACTTTAATGGCTACTGGCA
* * * *
5720916 GCGAACCGGTAAAATCTCAAAAGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA
65 GCAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA
* * * **
5720981 GGGGGCCAATATAAGGTCCAAGTAGCAGCACCCATCACACATCATGTTTGCACACCCCCCTGGCC
130 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTGGCC
* * * * *
5721046 CCCCGATCGCTGGAACCCCAATGCCACCGGTCAGGTTCTCCAATGATACTCC-AGTGATGGTGCC
194 CCCCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTCCGA-TGATGGTGCC
* * * *
5721110 CCAGCGAATAAAAATACGGCACCAGCACATGTCCGAGCCCAGCATTTGCTGCCG-CAACCATCGG
258 CCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAACC-TCGG
*
5721174 TCCGATCCGATCTT-GACTGGGAATGAACTCCGTATGC
322 TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC
5721211 CTAAGCCAAC
Statistics
Matches: 1926, Mismatches: 208, Indels: 46
0.88 0.10 0.02
Matches are distributed among these distances:
894 2 0.00
895 431 0.22
896 234 0.12
897 143 0.07
898 73 0.04
899 265 0.14
900 66 0.03
901 145 0.08
902 257 0.13
903 2 0.00
904 305 0.16
905 3 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.25
Consensus pattern (898 bp):
TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
CAAACCTGTAAAATCTCAAATGCACTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAG
GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTGGCCCC
CCGATCGCCGGAACCCCAATGCCATCGGTCAGGTTCTCCGACGATGCTCCGATGATGGTGCCCCA
GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGTAAACCTCGGTCCG
GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTACGTATGCCTAAG
TCAACCCATGAAACGAACGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGA
TCAGATCGAGTCCCCCTCTACGTGCTGTCGATCCTGCTCTGCAACCCTAGGTTGGTCTGATCTTA
GACTGGCAATGAACCTGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCAGGCGGGC
ACTACATCAGCCAGAGAAACGAGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG
TACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCT
TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACT
TTTTACGGTTCAGATTTTTGAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAACTGGTAGACGTGA
TCCTTGTATTTTTGTTGGCATGCATAAAACAATTCAGCTAAAAACTCAAAGTG
Found at i:5720316 original size:26 final size:26
Alignment explanation
Indices: 5720287--5720339 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5720277 CTGGTCCGAT
*
5720287 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5720313 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5720339 C
1 C
5720340 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5721241 original size:4 final size:4
Alignment explanation
Indices: 5721232--5721262 Score: 53
Period size: 4 Copynumber: 7.8 Consensus size: 4
5721222 GATGAAATGA
*
5721232 GCGG GCGG GCGG GCGG GCGG GCCG GCGG GCG
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GCG
5721263 AGCAGGCACT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
4 25 1.00
ACGTcount: A:0.00, C:0.29, G:0.71, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:5723389 original size:899 final size:893
Alignment explanation
Indices: 5721383--5723721 Score: 3355
Period size: 899 Copynumber: 2.6 Consensus size: 893
5721373 GGCTTGTAAA
* * *
5721383 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTTTAAAACTTTTTAC
1 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
*
5721448 GGTTTGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
66 GG-TTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
5721513 TGTATTTTTGTTGGCATGCACAAAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
130 TGTATTTTTGTTGGCATGCAC-AAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
5721578 CATTTGAAAAATGTGTCCCCATTTCAGACACTTTAACGGCTACTGGCAGCAAACCTGTAAAATCT
194 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * * *
5721643 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGGTTAGTGATAGGGGGCCAATATAAGGG
259 CAAATGCTCTTTAAGGGGGTGTGAGTTCT-TAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * *
5721708 CCAAGTACCAGCACCCATCGGACATCATATGCGCACACCCCCCCAGCCCCCCCAATCGTCGGAAC
323 CCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCCC-GGCCCCCCGATCGTCGGAAC
* * * *
5721773 ACC-AATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGGCGAGGAAAAATG
387 -CCTAATG-CGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATG
* * *
5721837 CGGCACCAGCAAATGCCCGAGCCCAGCATGTGCTGTCACAACCCTCGGTCCGGTCTGATCTTCA-
450 CGGCACCAGCACATGCTCGAGCCCAGCATGTGCTG-CTCAACCCTCGGTCCGGTCTGATCTT-AG
* * *
5721901 ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACCCCGTATGCCTAAGTCGACCCACGAA
513 ACTGGGAATGAACTCCGTATGCTTACACTGGGAATGAACCCCGTATGCCTAAGTCAACCCACAAA
* * * * * *
5721966 GCGAGCGTGCGGGCACTCAGCCGGCCAGATGGGCGGGATGCGTAAGCCAGGGATTGGTCGAGTCC
578 ACGAGCGTACGGGCACTCAGCCGGCCAGATGGGCGAGATGCGCAAGCCAGGGATCGATCGAGTCC
* * * * *
5722031 CCCTCTACATGCTGTCAATCCTGCTGCTATAACCCTCCATCCGTCTGATTTTAGACTGGGAATGA
643 CCCTCTACATGCTGCCAATCCTGCTACCACAACCCTCCATCCGTCTGATCTTAGACTGGGAATGA
* * **
5722096 ACTTCATATGCCTAACCAACCGATGAAACGAGCAGGCGGGCGGATGGGTGGGCACTATGCCGCCC
708 ACTTCATATGCCTAACCAACCGACGAAACGAGCAGGCGGGC-GA-GGGCGGGCACTACACCGCCC
* * * *
5722161 AGAGAGACGGATTCGTAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCATCATAT
771 AGAGAGACGGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGAACATCATCATAT
* *
5722226 TTCTGCATGTCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCACTTAAGCC
836 TTATGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCACTTAAGCC
5722284 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
1 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
* * * ** *
5722349 GGTTAAGGATTTTTTAAAATTTTTTTGGAAGGATTTTTGGCCCCAAACTTGGTAGACAAGATACT
66 GGTTGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* *
5722414 TGTATTTTTGTTGGCATTCACAAAAACATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
130 TGTATTTTTGTTGGCATGCACAAGAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
5722479 AATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCT
194 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
5722544 CAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
259 CAAATGCTCTTTAAGGGGGTGTGAGTTCTT-AGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * *
5722609 CCAAGTACCAGCACCCATCACACATCCTGTGCGCTCACCCCCCCGGCCCCCCTGATCGTCGGAAC
323 CCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCCCGGCCCCCC-GATCGTCGGAAC
* * * *
5722674 CCTAATGCGCC-GTCAGGTTCTTCCGGCGATGCTCCGACGATGGTGCCCCAACTAAGAAAAATGT
387 CCTAATGCGCCGGTCAGGTTC-TCCGGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGC
* *
5722738 GGCACCAGCACATGCTCGAGCCCAGTATGTGCTGCCTCAACCCTCGGTCTGGTCTGATCTTAGAC
451 GGCACCAGCACATGCTCGAGCCCAGCATGTGCTG-CTCAACCCTCGGTCCGGTCTGATCTTAGAC
* * * *
5722803 TGGAAATGAACTCCGTATGCTTACACTGTGAATGAACTCTGTATGCCTAAGTCAACCCACAAAAC
515 TGGGAATGAACTCCGTATGCTTACACTGGGAATGAACCCCGTATGCCTAAGTCAACCCACAAAAC
* * * * *
5722868 GAGCGTACGGGCGCTCAGTCGGCCAGA-GAGGCGAGATGCGCAAGCCGGGGATCGATTGGGTCCC
580 GAGCGTACGGGCACTCAGCCGGCCAGATG-GGCGAGATGCGCAAGCCAGGGATCGATCGAGTCCC
* * * *** *
5722932 CCTCTGCATGCTGCCCATCCTGCTACCGCAACCCTTGGTTCGGTCTGATCTTAGACTGGGAATGA
644 CCTCTACATGCTGCCAATCCTGCTACCACAACCC-TCCATCCGTCTGATCTTAGACTGGGAATGA
* * *
5722997 AC-TCTGTATGCCTAAGCCAACCGACGAAATGAGC-GTGCGGGC-A-GGCGGGCACTACACCGGC
708 ACTTC-ATATGCCTAA-CCAACCGACGAAACGAGCAG-GCGGGCGAGGGCGGGCACTACACCGCC
* * *
5723058 CAGAGAGACGGGATGCGCAAGTCGTGGATCGATATGGTGGTAAGTGGGTTTAGGAACATCTTCAT
770 CAGAGAGAC-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGAACATCATCAT
** *
5723123 ATTTATGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC-CATTAGGCC
834 ATTTATGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCAC-TTAAGCC
* * *
5723183 TTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTGC
1 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
* * **
5723248 GGTTCGAGATTTTTTAAAATTTTTTCGGAAAGAGTTCTGGCATCAAACTTGGTAGACGTGATCCT
66 GGTT-GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
*
5723313 TGTATTTTTGTTAGCATGCACAAGGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
130 TGTATTTTTGTTGGCATGCACAA-GAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* *
5723378 CGTTGGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
194 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* *
5723443 CCAATGCTCTTTAAGGGGGTGTGAGTTCTCTTGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
259 CAAATGCTCTTTAAGGGGGTGTGAGTTCT-TAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* * * * *
5723508 CCAAGTACCAGCACCCATTGCACATCATTTGTGCACACCCCCCCGACCCCCCGATCGCCGGAACC
323 CCAAGTACCAGCACCCATCGCACATCATATGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACC
* *
5723573 CTAATGCAGCCGGTCAGGTTCTCCGGTGATGCTCTGACGATGGTGCCCCGACAAAGAAAAATCCG
388 CTAATGC-GCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCG
* * *
5723638 GCACCAGCACATGGTCGAGCCCAGCATTTGCCGCTGCAACCCTCGGTCCGGTCTGATCTTAGACT
452 GCACCAGCACATGCTCGAGCCCAGCATGTGCTGCT-CAACCCTCGGTCCGGTCTGATCTTAGACT
*
5723703 GGGAATGAACTCTGTATGC
516 GGGAATGAACTCCGTATGC
5723722 CTAAGCCAAC
Statistics
Matches: 1286, Mismatches: 132, Indels: 42
0.88 0.09 0.03
Matches are distributed among these distances:
898 45 0.03
899 568 0.44
900 264 0.21
901 387 0.30
902 22 0.02
ACGTcount: A:0.25, C:0.24, G:0.24, T:0.27
Consensus pattern (893 bp):
TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGC
GGTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTT
GTATTTTTGTTGGCATGCACAAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
AATGCTCTTTAAGGGGGTGTGAGTTCTTAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
AGTACCAGCACCCATCGCACATCATATGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCTA
ATGCGCCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGCCCCGACAAAGAAAAATGCGGCAC
CAGCACATGCTCGAGCCCAGCATGTGCTGCTCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAA
TGAACTCCGTATGCTTACACTGGGAATGAACCCCGTATGCCTAAGTCAACCCACAAAACGAGCGT
ACGGGCACTCAGCCGGCCAGATGGGCGAGATGCGCAAGCCAGGGATCGATCGAGTCCCCCTCTAC
ATGCTGCCAATCCTGCTACCACAACCCTCCATCCGTCTGATCTTAGACTGGGAATGAACTTCATA
TGCCTAACCAACCGACGAAACGAGCAGGCGGGCGAGGGCGGGCACTACACCGCCCAGAGAGACGG
ATGCGCAAGCCGTGGATCGATAGGGTGGTAAGTGGGTTTAGGAACATCATCATATTTATGCATGC
CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCACTTAAGCC
Found at i:5724675 original size:716 final size:715
Alignment explanation
Indices: 5722957--5725158 Score: 3310
Period size: 716 Copynumber: 3.1 Consensus size: 715
5722947 CATCCTGCTA
* *
5722957 CCGCAACCCTTGGTTCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
1 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
* * * ** *
5723022 GAAATGAGCGTGCGGGC---AGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGTCGTG
66 GAAACGAGCGGGCGGGCGGGCGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * **
5723084 GATCGATATGGTGGTAAGTGGGTTTAGGAACATCTTCATATTTATGTGTGCCAATGCCATTTTTA
131 GATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTATACGTGCCAATGCCATTTTTA
* *
5723149 TGGCTTGTAAATTCATACAATGGTCCATTAGGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG
196 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG
* *
5723214 TTTTCTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAAA
261 TTTTTTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAA
* * * * *
5723279 GAGTTCTGGCATC-AAACTTGGTAGACGTGATCCTTGTATTTTTGTTAGCATGCACAAGGAAATT
326 GAGTTTTGGC-CCGAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAAAT
* **
5723343 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCGTTGGAAAAAAGTGTCCCCATTTCAGACA
390 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACA
*
5723408 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCCAATGCTCTTTAAGGGGGTGTGAGTTCTC
455 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT-
* * *
5723473 T-TGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATT
519 TGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATG
* * *
5723537 TGTGCACACCCCCCCGACCCCCCGATCGCCGGAACCCTAATGCAGCCGGTCAGGTTCTCCGGTGA
584 TGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCC-AATGCAGCCGGTCAGGTTCTCCGGTGA
* * **
5723602 TGCTCTGACGATGGTGCCCCGACAAAGAAAAATCCGGCACCAGCACATGGTCGAGCCCAGCATTT
648 TGCTCTGACGATGGTGCCCCG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATTT
5723667 GCCG
712 GCCG
*
5723671 CTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
1 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
5723736 GAAACGAGCGGGCGGGCGGGCGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
66 GAAACGAGCGGGCGGGCGGGCGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* * * *
5723801 GATCAATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACATGCCAATGCCA-TTTTA
131 GATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTATACGTGCCAATGCCATTTTTA
* * *
5723865 GAGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
196 -TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC
* * *
5723930 GTTTTTTATTTTTCATGATTTTCGAAACTTTTTACGGTTTGGGATTGTTTAAAATTTTTTCGGAA
260 GTTTTTTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAA
*
5723995 GGAGTTTTGGCCCGAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAAAT
325 AGAGTTTTGGCCCGAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAAAT
*
5724060 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTTAGACA
390 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACA
5724125 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTT
455 CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTT
*
5724190 GAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGT
520 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
*
5724255 GCGCACA-CCCCCCGGCCCCCCGTTCGTCGGAACCTCAATGCAGCCGGTCAGGTTCTCCGGTGAT
585 GCGCACACCCCCCCGGCCCCCCGATCGTCGGAACC-CAATGCAGCCGGTCAGGTTCTCCGGTGAT
*
5724319 GCTCTGGCGATGGTGCCCCAGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATTTG
649 GCTCTGACGATGGTGCCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATTTG
5724384 CCG
713 CCG
* * * * *
5724387 CCGCAACCATGGGTCCGGTCCGATCTT-GACTAGGAATGAACTCCGTATGCCTAAGCCAACCGAC
1 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
*
5724451 GAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCACAAGCCGT
66 GAAACGAGCGGGCGGGCGGGC-GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
* * *
5724516 GGATCGATAGGGTGGTAAGTGTGTTTAGGCACATCTTCATATTTCTACGTGCGAATGCCATTTTT
130 GGATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTATACGTGCCAATGCCATTTTT
* * *
5724581 ATGGCATGTGAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAAATGACT-
195 ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTC
* * * *
5724645 GATTTTTTATTTTTCATGATTTTTGAAACTTTTTGTGATTCGGGATTTTTTAAAATTTTTTTGGA
260 G-TTTTTTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGA
* * *
5724710 AAGTGTTTTGG-CAGTAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCATAAA-AAA
324 AAGAGTTTTGGCCCG-AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAA
*
5724773 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCAATTTCAG
388 A-TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAG
*
5724838 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGTGGTGTGAGTT
452 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * * *
5724903 CTCGAGGTTTGATAAGTGATAGGGGGCCAATATAAGGGCCAGGTACCAGCACCCATCGCACATCA
517 CTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * *
5724968 TGGGCGCACACCCCCCTCCCGGCCCCCCCGATCATTGGAACCCCAATGCCGTCGGTCAGGTTCTC
582 TGTGCGCACA--CCCC-CCCGG-CCCCCCGATCGTCGGAA-CCCAATGCAGCCGGTCAGGTTCTC
* ** * * * *
5725033 TGGCAATGCTCCGACGATGGTGCCCCGGCGGAGAAAAATTCGGCAGCAGCACATGCCCGAGCCCA
642 CGGTGATGCTCTGACGATGGTGCCCC-GCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCA
** *
5725098 GCAAGTGCTG
706 GCATTTGCCG
** * * *
5725108 CCATAACCCTCAGTCCGGTTTGATCTTAGACTGGGAATGAACCCTGTATGC
1 CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGC
5725159 TTAGACTGGG
Statistics
Matches: 1351, Mismatches: 117, Indels: 32
0.90 0.08 0.02
Matches are distributed among these distances:
714 77 0.06
715 63 0.05
716 599 0.44
717 465 0.34
719 3 0.00
720 5 0.00
721 117 0.09
722 22 0.02
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.27
Consensus pattern (715 bp):
CCGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAACCGAC
GAAACGAGCGGGCGGGCGGGCGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
GATCGATAGGGTGGTAAGTGGGTTTAGGCACATCTTCATATTTATACGTGCCAATGCCATTTTTA
TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCG
TTTTTTATTTTTCATGATTTTCGAAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGGAAA
GAGTTTTGGCCCGAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAGAAAATC
AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTCAAAAAAGTGTCCCCATTTCAGACAC
TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTG
AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
CGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCAATGCAGCCGGTCAGGTTCTCCGGTGATGC
TCTGACGATGGTGCCCCGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATTTGCCG
Found at i:5725168 original size:26 final size:26
Alignment explanation
Indices: 5725132--5725184 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
5725122 CCGGTTTGAT
5725132 CTTAGACTGGGAATGAAC-CCTGTATG
1 CTTAGACTGGGAATGAACTCC-GTATG
5725158 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5725184 C
1 C
5725185 ATAAGTCAAA
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5726799 original size:26 final size:26
Alignment explanation
Indices: 5726770--5726822 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5726760 CCGGTCTGAT
* *
5726770 CTTAGACCGGGAATGAACTCCGCATG
1 CTTAAACCAGGAATGAACTCCGCATG
* *
5726796 CTTAAACTAGGAATGAACTCCGTATG
1 CTTAAACCAGGAATGAACTCCGCATG
5726822 C
1 C
5726823 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.30, C:0.25, G:0.23, T:0.23
Consensus pattern (26 bp):
CTTAAACCAGGAATGAACTCCGCATG
Found at i:5728583 original size:26 final size:26
Alignment explanation
Indices: 5728547--5728599 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5728537 TAGTTCTGAT
5728547 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
5728573 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
5728599 C
1 C
5728600 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:5729470 original size:26 final size:26
Alignment explanation
Indices: 5729441--5729490 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
5729431 TCAGTCCGAT
*
5729441 CTTAGACTGGGAATGAACTCCGTACG
1 CTTAGACTGGAAATGAACTCCGTACG
*
5729467 CTTAGATTGGAAATGAACTCCGTA
1 CTTAGACTGGAAATGAACTCCGTA
5729491 GGCCTAAGTC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.20, G:0.24, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTACG
Found at i:5730372 original size:26 final size:26
Alignment explanation
Indices: 5730343--5730393 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
5730333 CCGGTCCGAT
5730343 CTTAGACTGGGAATAAACTCCGTATC
1 CTTAGACTGGGAATAAACTCCGTATC
*
5730369 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAATAAACTCCGTAT
5730394 GCCTAAGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.22, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATC
Found at i:5730593 original size:12 final size:12
Alignment explanation
Indices: 5730576--5730605 Score: 60
Period size: 12 Copynumber: 2.5 Consensus size: 12
5730566 GATGAAATGA
5730576 GCGGGCGGACGG
1 GCGGGCGGACGG
5730588 GCGGGCGGACGG
1 GCGGGCGGACGG
5730600 GCGGGC
1 GCGGGC
5730606 ACTATGTCGG
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.07, C:0.27, G:0.67, T:0.00
Consensus pattern (12 bp):
GCGGGCGGACGG
Found at i:5731281 original size:26 final size:26
Alignment explanation
Indices: 5731252--5731303 Score: 104
Period size: 26 Copynumber: 2.0 Consensus size: 26
5731242 CTAGTCCGAT
5731252 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5731278 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5731304 TCTAAGTCAA
Statistics
Matches: 26, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5731493 original size:4 final size:4
Alignment explanation
Indices: 5731484--5731517 Score: 59
Period size: 4 Copynumber: 8.5 Consensus size: 4
5731474 GACGAAACGA
*
5731484 GCGG GCGG GCGG GCGG GCGG GCGG GCAG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GCGG GC
5731518 ACTACGTCGG
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
4 28 1.00
ACGTcount: A:0.03, C:0.26, G:0.71, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:5732195 original size:26 final size:26
Alignment explanation
Indices: 5732166--5732216 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
5732156 AATCCGATCA
*
5732166 TAGACTGGGAACGAACTCCGTATGCT
1 TAGACTAGGAACGAACTCCGTATGCT
* *
5732192 TAGACTATGAATGAACTCCGTATGC
1 TAGACTAGGAACGAACTCCGTATGC
5732217 CTAAGTCAAC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.22, G:0.24, T:0.25
Consensus pattern (26 bp):
TAGACTAGGAACGAACTCCGTATGCT
Found at i:5733100 original size:26 final size:26
Alignment explanation
Indices: 5733071--5733123 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5733061 CCGATCCGAT
*
5733071 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5733097 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5733123 C
1 C
5733124 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5733726 original size:906 final size:907
Alignment explanation
Indices: 5725990--5761220 Score: 15617
Period size: 902 Copynumber: 38.7 Consensus size: 907
5725980 CCAGCACATG
** ** * * *
5725990 GCCGGGGATCGACCGGG-CCCCCATCTGCATGCTGCCGATCCTGCTGCTGTAACGCTCAGTCCGG
1 GCCGGGGATCGGTCGGGTCCCCC-TCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGG
* * *
5726054 TCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA-C--TG--ACGA--A-GCGAGCG
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* ** * * * *
5726111 GGCGGGCAGGCGGGCTTTATGCCCGCCAGAGAGACGGGATGTGCAAGCCGTGCATCGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
** *
5726176 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTCAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * ** * *
5726241 CATACAATGGTCACTTAAGCCTTCACGGGAAGTTTCATGGCAAGGTGACTTGTTTTCTCTTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * *
5726306 ATGATTTTCAAAACTTTTAG-G-TTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGGCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTT-GGCCC
* * *
5726369 C-AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAGAAACTTCAGCTAAAAACTT
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * * *
5726433 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTCCCAATTCCAGACACTTTAATGGCTAC
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
5726498 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTGTCGAGGTTTGATGA-
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
5726562 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
5726627 GG-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * ** * *
5726691 TGCCCTGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAGCAAAGCATGTGCTGCTGCAACTCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * * * *
5726756 TGGTCCGGTCTGATCTTAGACCGGGAATGAACTCCGCATGCTTAAACTAGGAATGAACTCCGTAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * *
5726821 GCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCAGCCAGAGGGGCGAGATGCGCAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
** * * **
5726885 GCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTACTACCGCAACCCTCAGTCCATT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * *
5726950 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGTGGGCAG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
** * *
5727015 GCGGGCGGTTGGGCAGTACGCCGGCCAGAAAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
5727080 TAGGT-GGTTTACGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * * * *
5727144 ATACAATGGTCCATTAAGCCTTCACATGAAGTTTCAAGGCAACACGACTTGTTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * * ** * **
5727209 CGATTTTTGAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTAGAAAGAGTTTTGGATCCA
326 TGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * * *
5727274 AACATGGTAGATGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA
391 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAA
* *
5727339 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATAGCTACTG
456 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
5727404 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
521 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
* *
5727469 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCCA
586 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCG
* * * **
5727534 GCCCCCTCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCAACGATGCTCCGACGATGGT
650 GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGT
** *
5727599 GCCCCGGTGAAGAAAAATGCGGCACCAGCACAT------G-CC--C----G-TGCCACAACCCTC
715 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * * *
5727650 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGTCAGGGAATGAACTCTGTATG
780 GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* *
5727715 CCTAAGTCAACCCACGAAAGGAGCGTGCGGGCTGCTCAGCCGACCAGAGGGGCGGGATGCGCAA
845 CCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
** * * * * * *
5727779 GCCGGGGATCGGTCAAGTCCCCCTCTGTGTGCTACCAATCCTGCGGCCGTAACCCTCATTTCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * *
5727844 -TCGATCTTAGACTAGTAATGAACTCCTTATGGCTAAGCCAACCGACGAAAC-A--A--------
66 CT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* *
5727897 -----GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* *
5727957 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
5728022 CATACAATGGTCCCTTAATCCTTCACGTGAAGTTTCATGGCATGATGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* *
5728087 ATGATTTTTAAAACTTTTTGCGGTTCAGGATCTTTTT-AAATTTTTTCGGAATGAGTTTTGGCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGAT-TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * * *
5728151 CAAACTTGGTAGACATGATACTTGTATTTTTGTTGACTTGCACAAAAAAATTCAGCTAAAAACTC
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * * *
5728216 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTTCCCATTTCGGACACTTTAATGGCTAT
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
5728281 TGGCAGCAAACCTATAAAATCTCAAATGCTCTTTCAGGGGGTGCGAGTTCTCAAGGTTTGATGAG
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * **
5728346 GGATAGGGAGGACAATATAAGGGCCAAGTTCCAGCACCCATTACACATCATGTGCGCACACACCC
584 GGATAGGG-GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCC
* * ** * *
5728411 CCGGACCCCCCGATCGTCGGAACCCCAATACCGCC-G--A-----T-C-AAGAT-CTTCGGCGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * * *
5728465 GGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCTGAGCCCAGGATATGCTGCCGCAACC
712 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * *
5728530 CTCGGTCTAGTTCTGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCCG
777 CTCGGTC-CGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * *
5728595 TATGCCTAAGTCAACCCACGAAACGAGCGTGTGGGTGCTCAACCGGCCAGAGGGGCGGGATGCAC
841 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
5728660 AA
906 AA
* ** * ** * *
5728662 GCCGGGGATCGGTCGGGTCCCCTTCTACGTGTTGTTGATCTTGCTGCCGCAACCCTTAGTCCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
*
5728727 CTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-A---------
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * *
5728780 GCGGGCGGGCGGGCACTTCGTCGGCTAGAGAGACGGGAT-CGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
5728844 TAGGTGGGTTTAGTG-ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
196 TAGGTGGGTTTAG-GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
5728908 CATATAATGGTCCATTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * * * *
5728973 ATGATTTTTGAAACTTTTTGCGGTTCGGGATTTTTTTAAATTTTTTCGAAAGGAGTATGGGTCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
** * * *
5729038 AAACTTTTTAGACGTGATCCTTCTATTTTTGTTGGCATGCATAAAAAAATTCAGCTAAAAACTCG
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
*
5729103 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAGTTTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
5729168 GGCAGCAAACCTGTAAAATCTGAAACGCTCTTTAAGGGGGTGTGAGTGCTCAAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* ** * * *
5729233 AATAGGGGGCCAATATAATAGCCAAGTACCAGCACCCATCGCACATCATGTGCACATACCCCCTG
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* *
5729298 GCCCCCCCGATCGTCGGAACCCCAATGCCACCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGT
650 GCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGT
* * *
5729363 GCCCCGACGAAGAAAAATGTGGCACCAGCACATGACCGAGCCCAGCATGTGCTACCGCAACCCTC
715 GCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC
* * * * *
5729428 GGTTC-AGTCCGATCTTAGACTGGGAATGAACTCCGTACGCTTAGATTGGAAATGAACTCCGTAG
780 GGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* *
5729492 GCCTAAGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * *
5729556 GCCGGGGATCGGTCGGGTCACCCTCTGTGTGCTGTCGATCCTGCTGCCACAACCCTCAGTCTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
** * * *
5729621 CCAATTTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-A-TCGAGCGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * * *
5729682 GC-GGCGGGCGGGCACCACGCTGGCCAAAGAGATGGGATGCGCAAGCCGTGGATCGAT-GCGGTG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG-GGTG
5729745 GTAGGTGGGTTTAGGCACATCTTCATATTTCT--ATGGGCCAATGCCATTTTTATGGCTTGTAAA
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT--GCCAATGCCATTTTTATGGCTTGTAAA
*
5729808 CTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
258 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
* * * * * * * ** *
5729873 TCACGATTTTCAAAACTTTTTCCGGTTT-GGGGTTTTTTTAAATTTTTTCGAAAATATTTTTGGC
323 TCATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGC
* *
5729937 CCCAAACTTGTTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAAC
387 CCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAAC
*
5730002 TCAAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
452 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* *
5730067 ACTGGCAGCAAACCTGTAAAATCTCGAATGCTCTTTAAGGGATGTGTGAGTTCTCAAGGTTTG-T
517 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-GGTGTGAGTTCTCAAGGTTTGAT
*
5730131 GAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
581 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * *
5730196 CCTGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGATCAGGTTCT-CGGAAGATGCTCTGACG
646 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGG-CGATGCTCCGACG
**** * * *
5730260 ACAACGCCAC-AGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGTCGCA
710 ATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
* * * *
5730324 ACCCCCGGTCCGGTCCGATCTTAGACTGGGAATAAACTCCGTATCCTTAGACTGGGAATGAACTC
774 ACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * *
5730389 CGTATGCCTAAGTCAACCCACGAAACGAGCGCGCGGGCGCTCAGCCGGCCAGAGAGGCGAGATGT
839 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
**
5730454 AAAA
904 GCAA
** * * * * * * *
5730458 GCCGGGGATCAATCGGGTGCCCCTTTGCGTGCTGCCGATCCTACTGCCGCAACGCTCGGTCTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
** * * * *
5730523 CCAATCTTAGACTGGGAATGAACTCCGAATGCCTAAGCCAACCGATGAAATGAGCGGGCGGACGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC---AGG-CGG
* * *
5730588 GCGGGCGGACGGGCGGGCACTATGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
127 GCGGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGG
* * * *
5730653 GTGGTAGGTGGGTTTAGCCACATCTTCATATTTCTGCGTGCCAATGCCATTTGTATCGCTTGTAA
192 GTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAA
* *
5730718 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTTGTTTTCTATTT
257 ATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTT
* * *
5730783 TTCACGATTTTCAAAA-TTTTTGCGGTTT-GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
322 TTCATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGG
* * * * *
5730846 CCCCAAACTTGGTAGACATGATCCTTGTATTTTTGTTGGCATGCTCAAAATATTTCAGCTATAAA
386 CCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAA
* *
5730911 CTCAAAGTGTACAAGATTTTGTGACCATTTGAGAAAAGTGTCCCGATTTCAGACACTTTAATGGC
451 CTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGC
* * *
5730976 TACTGGCAGCAAACCAGTAAAATCTCAAATGATCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGAT
516 TACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGAT
*
5731041 GAGGGATAGGGGGCCAATATAAGGGTCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
581 GAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC
* * * * * *
5731106 CCCGG-CCCCCCGATCGCCGGAACCCCAAGGCCGTCGGTCAGGTTCTCCGACGTTGCTCC-AGTG
646 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGA-CG
* * * * *
5731169 ATGGTGCCTCGAAGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTACCGTAA
710 ATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* *
5731234 CCCTCAGT-CTAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
775 CCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
* * * * *
5731298 CGTATGTCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGACTAGAGGGGC-AGATGC
839 CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
5731362 GCAA
904 GCAA
* *** * * * ** ** **
5731366 GTCGGGGATCACCCAGGTCCCCCTCTATGTGCTGCCGATCTTGCTTTCGCAACCCTTGGTTTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* *
5731431 CTGATCTTAGAGTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCAGGCGG
* * *
5731496 GCGGGCGGGCGGGCAGGCGGGCACTACGTCGGCCAGAGAGACGGGACGTGCAAGCCGTGGATCGA
127 GCGGGCGGGC--G--GGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGA
* *
5731561 TAGGGTGGTTGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCCT
188 TAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTT
* *
5731626 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCT
253 GTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCT
* * * *
5731691 ATTTTTCATGATTTTTGAAACTTTTTGTAG-TTCAGGATTTTTTAAAATTTTTT-TGAAAGAGTT
318 ATTTTTCATGATTTTTAAAACTTTTTG-CGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTT
* * *
5731754 TTGGGCCCAAACTTGGT-GAACGTGATCCTTGTATTTTTGTTGGCATGCTCAAAAAAATTTAGCT
382 TTGGCCCCAAACTTGGTAG-ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
*
5731818 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTA
446 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* *
5731883 ATGGCTACTGGCAGCAAACCTGTAAAATCTAAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGT
511 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGT
* *
5731948 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACAAGCACCAATCGCACATCATGTGCGCA
576 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * *
5732013 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCACCGATCAGGTTCTCCGACGATGCTCC
641 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCC
* * * ** * ** *
5732078 GATGATGGTGCCCAG-CGGAGAAAAATGTAGCACCAGCACCTGCTGGAGCCGAGCATGTGCTGCC
706 GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* ** *** * * **
5732142 GCAACCTTCATTTTAATCCGATCATAGACTGGGAACGAACTCCGTATGCTTAGACTATGAATGAA
771 GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * *
5732207 CTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGCGCTCAGCTGGCCAGAAGGGCAGGA
836 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
*
5732272 TGCACAA
901 TGCGCAA
* ** * ** * *
5732279 GCCAGGGATCGGTCGGGTCCCCCTCTGCATGCTGTCGATCCTGCTGCCATAAACCTCAGTCCGAT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * * * * *
5732344 TTGATCTTAGACTGGGAATGAACTCCGTATGTCTAAGCCAACTGACGGAACAAGCGGGCGGGGGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
**** * * * *
5732409 GCGCATAGGCGGGCACTACGTCGGCCAGAGAGATGGGATGCGCAAGTCGTCGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * * * *
5732474 TAGGTGGGTGTAAGCACATTTTCATATTTCTGCATGCCAAAT-ACATTTTTATGTCTTGTAAATT
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCC-AATGCCATTTTTATGGCTTGTAAATT
* *
5732538 CATATAATGGTCCCTTAAGCCTACACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * * * *
5732603 AGGATTTTCAAAATTTTTTGTGGTTCCA-GATTTTTTAAAATTTCTTCGAAAGGAGTTTTGGGCC
325 ATGATTTTTAAAACTTTTTG-CGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * *
5732667 CAAACTTGG-CGAACGTGATCCTTGTATTTTTCTTGGCATGCACAAAAAGAAATCAGCTAAAAAC
389 CAAACTTGGTAG-ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATTCAGCTAAAAAC
*
5732731 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCCCCATTTCAGACACTTTAATGGCT
452 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
*
5732796 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATG
517 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
* *
5732861 AGGGATAGCGGGCCAATATAAGGGCCAAGTACAAGCACCCATCGCACATCATGTGCGCACACCCC
582 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * ** *
5732926 CCGGCCCCCCCGATCG-CCGAACCCGAATGCTGCCAATCAGGTTCTCCGGCGATGCTCTGACGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * *
5732990 GGTGCCTCGAC-AGAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCAGCAAC
712 GGTGCCCCGACGA-AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * *
5733054 CCTCGGCCCGATCCGATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTG
776 CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
** * *
5733119 TATGCCTAAGTCAA-CCACGAAACGAGCGTGCGGGCGCTCAGTTGGCCAGATGGGCGGGATGCGG
841 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
5733183 AA
906 AA
** * * * * * *
5733185 GCCGGGGATCGACCGGGTCCACCTCTGTGTGCTACCGATCTTACTACCGCAACCCTCTA-TCCAG
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTC-AGTCCGG
* * * *
5733249 TCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGGCAACCGACGGAACGAGCAGGCGGGCG
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* ** * * * *
5733314 GGCGGGTGGGCATGCACTCCACCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATTGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* *
5733379 GTAGGTGGGTTTAGGCACATCTTCATATATCTGCATGCCAATGCCATTTTTATGGCTTTTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
5733444 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTTAACGGCAAGAGGACTCGTTTTCTATTTTT
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAG-TTTCATGGCAAGACGACTCGTTTTCTATTTTT
* *
5733509 CATAATTTTTAAAACTTTTTACGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
324 CATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * * *
5733574 CAAACTTGGTAGGCATGATCCTTTTATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAACTC
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * *
5733639 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAGTGGCTAT
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
*
5733704 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* *
5733769 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATTTGCGCACACCCCCC
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* ** *
5733834 GG-CCCCCCGATCGCCAAAACCCCAATACCGCCGGTCAGG---T-------T-CTCCGA-GATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * * * *
5733886 TGCCTCGGCGAAGAAAAAGGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC-AAAACC-
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* *
5733949 C--T-CG----G----T---CT--G---G---TCCG-AT-CTTACACTAGGAATGAACTCCGTAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
** * * * *
5733990 GCCTAAGTCAACCCACGAAACGAGCAAGCGGCCCACTCAACCGGCCAGTA-GGGCAGGATGCGCA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGG-GCGCTCAGCCGGCCAG-AGGGGCGGGATGCGCA
5734054 A
907 A
* * * * * ** *
5734055 GCCGGGGATCGGTCGGGTCCCCCGCTATGTGCTGTCGATCCTGCTTCTGCAACCCTTGGTTCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * * * *
5734120 CTGATCTTAGACTGGGAATGACCTTCATATCCCTAAGCCAACCGACGAAAC--G-A-GTGGGTGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* *** * *
5734181 GCGGGCAGGCATTCACTATGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* *
5734246 TAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTGTGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
5734311 ATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAGTCGTTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * ** *
5734376 TGATTTTTTAAACGTTTTGCGTTTCAGGATTTTTTAAAATTTTTTC-GAAACAGTTTTGGGCCCA
326 TGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
* * * * *
5734440 AACATGGTAGACGAGATCATTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCCA
391 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAA
* * *
5734505 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAAACACTTGAATGGCTACTG
456 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
5734570 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
521 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
** * * *
5734635 ATAGGGGGATATTATACGGGCTAAGTACCAGCACCCATCGCACATCATGTGCGCACAACCCCCC-
586 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC-ACCCCCCG
** * * *
5734699 -CCGACCCTTGATCGTCGGAACCCCAAT---GTC-G-CAGG---T----C-AAG-TCCGGCGATG
650 GCC--CCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATG
* * * *
5734749 GTGCCCCGACGAAGAAAAATGCAGCATCAGCACATGCCCAAACCCAGCATGTGCTG-CGACAACC
713 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG-CAACC
*******************
5734813 CTCGGTCCGATCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
777 CTCGGTCCGATCC---------------------------------GATCTTAGACTGGGAATGA
*****************************************************************
5734878 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
809 ACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCG
**********************************
5734943 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
874 GGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
*****************************************************************
5734977 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
*****************************************************************
5735042 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
*****************************************************************
5735107 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*****************************************************************
5735172 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*****************************************************************
5735237 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
*****************************************************************
5735302 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
326 TGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
*****************************************************************
5735367 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
391 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAA
*****************************************************************
5735432 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
456 AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
*****************************************************************
5735497 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
521 GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
*****************************************************************
5735562 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
586 ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG
*****************************************************************
5735627 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
651 CCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTG
*****************************************************************
5735692 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
716 CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
*****************************************************************
5735757 NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
781 GTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
**** * * * * * * ** **** *
5735822 NNNNGATCTTAGA-CCA-GGAATGAAC-TCCGTATGCG-T-AGACTGGGAATGAACTAC-GTATG
846 CTAAG-TC--A-ACCCACGAAACGAGCGTGCG--GGCGCTCAG-CCGGCCA-GAGGGGCGGGATG
5735881 C-CTAA
903 CGC-AA
* * *** *** * * * * * * * ** ** *
5735886 GTC----AACCCACGAAACGACCGTAC-GGGCGCTCAGCC-AGCCAG-AGGGGCAGGATGCGCAA
1 GCCGGGGATCGGTCGGGTC-CCCCT-CTGTGTGCT--GCCGATCCTGCTGCCGCA--ACCCTC-A
* * * *** * * * ** * * * ***
5735944 G-CCGG--GGA---TAGGCCGGG--TCCCCCTCTACGTACTACC-GATCCTGCTGCCGCAACCCT
59 GTCCGGTCTGATCTTAGACTGGGAAT-GAACTC--CGTA-TGCCTAAGCCAACCGACGAAACGAG
* ** *** * * ** ** * * * * * * *
5736000 CAGTCCGATCTCATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACAAAACGAG-C
120 CAG-GCGGGC-GGGC--GGGC--GG-GCGGGC-AC-TACGCC--GGCC-A--GA-GAGACGGGAT
* ** * * * * * * ** *
5736064 GGGCGGGCGGGTGG-GC-ACTACGCTGGCCAGAGAGACGGGAT-GTGCA-AGCCGTGGCTCGATA
170 GCGCAAGC-CGTGGATCGA-TAGGGTGG-TAG-GTG--GGTTTAG-GCACA-TC-T---TC-ATA
*** * * *** * * * ** * ** * * * ** **
5736125 GGGCGGTAGGTGGGTTTAGGCACATCTTCAT-ATTTCTGCATGCCAATGCCATTTTCATGGATTG
222 TTTCTGCA--T--GCCAATGC-CATTTTTATGGCTTGTAAAT-TC-ATACAATGGTC----CCT-
* * * * * * *
5736189 TAAATTCATACAATGGTC-CCTTAAGCCTTCACGTG-AAGTTTCATGGCAAGACGATTCATTTTT
275 T-AA-GC---C--T--TCACGTGAAG-TTTCATG-GCAAG----A---C--GAC---TCGTTTTC
* * * * * * *
5736252 TATTTTACGTGATTTTTGAAACTTTTTGAGGTTC-GAGATTTTTTAAAATTTTTTTGAAAGGAGT
317 TATTTTTCATGATTTTTAAAACTTTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGT
* * * *
5736316 TTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTTTTGCCATGCACAAAAAAATTCAACT
381 TTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCT
* * *
5736381 AAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTA
446 AAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTA
* *
5736446 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGAGGTGTGAGTTCTCAAGGT
511 ATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGT
5736511 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
576 TTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCA
* * *
5736576 CACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAG---T-------T-CTCC
641 CACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCC
** * *
5736630 GACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTTCC
706 GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
* * * ** *
5736695 GCAACTCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCTGTA-GCTTAGACTGGGAATGAA
771 GCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * *
5736759 CT-CGTATGCCTAGGTCAACCCATGAAACGAGCTTACGGGCGCTCAGTCAGCCAGA-----GGGA
836 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
5736818 TGCGCAA
901 TGCGCAA
* * * * * * *
5736825 GTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCTTGATGTCGTAACCCTCAGTCCAGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* *
5736890 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAATCGACGAAAC--G-A-----GCGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * **
5736947 GCGGACGGGCGGGCACTACGCTGGCCAGAGAGATAGGATGCGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
** * *
5737012 TAGGTGCATTTAGGAACATCTTCATATTTCTGCATGGCAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
5737077 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * *
5737142 CGATTTTCAAAACTTTTTGCAGTTT-GGGATTTTTTTAAATTTTTTCGGAAGGATTTTTGGCCCC
326 TGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
5737206 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
*
5737271 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGACACTTTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * * * *
5737336 AGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGACTTCTCGAGGCTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* *
5737401 GACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGGACATCATGTGCGCACACCCCCCC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCC
* * * *
5737466 CGGCCCCCCCGACCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTCGATGGTCTGACGATG
648 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATG
* *
5737531 GTGCCTCGACGAAGAAAAATGCGACACCAGCACATGCCCGA-CCCAGCATGTGCTGCCGCAA-CC
713 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
5737594 -C--T-C-A---G-TC-----C--GG--T----T-CG-AT-CTTAGACT-GGAATGAACTCCGTA
778 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * * * *
5737633 TGCCTAAGTCATCCCACTAAACAAGCGTGCAGGTGTTCAGCCGGCCAGAGGGGTGGGATGCACAA
843 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * *
5737698 GCCGAGGATCGGCCAGGTCCCCCTCTGCGTGCTACCGATCATGCTGCCACAACCCTC-GATTCGG
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGG
** * * * * * * *
5737762 TCCAATCTTAGACTGGAAATGAACTCTGTATGCCTAAGCAAACAGATGAAAC--G-A-GCGGACA
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* * *
5737823 GACGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
5737888 GTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * * *
5737953 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTCATTTTTTATTTTAC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * *
5738018 GTGATTTTTGAAACTTTTTGAGGTTC-GAGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGGCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * * *
5738082 CAAACTTGGCAGACGTGATCCTTGTATTTTTTTTGCCATGCACAAAAAAATTCAACTAAAAACTC
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* * *
5738147 GAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTAC
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
5738212 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGAGGTGTGAGTTCTCAAGGTTTGATGAG
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
5738277 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * *
5738342 GGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAG---T-------T-CTCCGACGATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * *
5738396 TGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCTTCCGCAACTCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * ** *
5738461 CGGTCTGGTCTAATCTTAGACTGGGAATGAACTCTGTA-GCTTAGACTGGGAATGAACT-CGTAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * * * *
5738524 GCCTAGGTCAACCCATGAAACGAGCTTACGGGCGCTCAGTCAGCCAGA-----GGGATACGCAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * *
5738583 GCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCTTGATGTCGTAACCCTCAGTCCAGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
*
5738648 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCGACGAAAC--G-A-----GCGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * **
5738705 GCGGACGGGCGGGCACTACGCTGGCCAGAGAGATAGGATGCGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
** * *
5738770 TAGGTGCATTTAGGAACATCTTCATATTTCTGCATGGCAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
5738835 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCTAGAC-AGCTCGTTTTCTATTTTTC
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-CTCGTTTTCTATTTTTC
* * * * * * *
5738899 AAGATTTTTGAAACTTTTTACGGTTCAGGATTTTTTAAAATTTTTTCAGAAGAAGTTTTTGCCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * * * *
5738964 AAACTTGGTAGACATGATCCTCGTATTTTTCTTGGCATGCACAAAACAATTCAGCTAAAAACTCG
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
* *
5739029 AAGTGTACAAGATTTTGCGACCATTTAAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
5739094 GGCATCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* * * *
5739159 GATAGAGGGCCAATCTAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCACACACCCCCCC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC
* * * * * *
5739224 GGCCCACCCGATTGTCGAAACACCAATGTCGTCGGTCAGGTTCT-C--CG--G-T-----GATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * * * ** *
5739278 TACCCCGACGAAGAAAAATGCAGCCCCAGCACATGCCCGAGCCCAGCATCTACTTTCGCGACCCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * ** *
5739343 CAGTTCGGTCTGATCTTAGACTGGGAATGAACTCC-TATGCTTAGACTACGAATGAACTCCATAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * ** * *
5739407 GCCTAAGTCAACCTACGAAACGAGCGTACGGGCGCTCAGCCGGATAGAGGGGCAGGATGCGTAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * *
5739471 GCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCACAACCCTCAGTCAGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * *
5739536 CCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGACGAAA--TG-A-GCGGGCGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * * ** *
5739597 GCGGGCGCGTGGGCACTACGCCGACCAGAGAGATAGGATGCGCAAGCCGTGGATCGATAAGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * *
5739662 TAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCATTTTTATGGGTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
5739727 ATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-AGCTCGTTTTCTATTTTTC
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-CTCGTTTTCTATTTTTC
* * * * * * * *
5739791 TTGATTTTTGAAACTTTTTACGGTTC-GAGATTTTTTTAAATTTTTTTGGAAGGAGTTTTTGCCG
325 ATGATTTTTAAAACTTTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* *
5739855 CAAACTTGGTATACGTGATCCTTGTATTTTTCTTGGCATGCA-AAAAACAATTCAGCTAAAAACT
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATTCAGCTAAAAACT
* * *
5739919 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTCAGACACTTTAAAGGCTA
453 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * **
5739984 CTGGCAGCAAACCTGTAAAATCTCAAATGCGCTTTAAGGGGGGGTGAGTTCTTGAGGTTTGATGA
518 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* *
5740049 GGGATAGGGGGCCAATATAAAGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCC
583 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC
*
5740114 CCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGA---T-C--C--T
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * * *
5740171 GGTGCCCCGACGAAGAAAAATACGGCACC-GACACATTCTCGAG-CCAGCATGTGCTGCCGGAAC
712 GGTGCCCCGACGAAGAAAAATGCGGCACCAG-CACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
*
5740234 CCTCGGTCC-A---G-TC-----C----CAT---CT---TA-G---AGA--GGGAATGAACTCCG
776 CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * * **
5740273 TATGCCTAGGTCAACCCACGAAACAAGCGTACGGGCGCTCAGTCGGCCAGAGACGCGGGATGCGC
841 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
5740338 AA
906 AA
* * * * * ** * *
5740340 GCCGAGGATC-GACTGGGTCCCCCTTTGCGTGCTGCTGATCCTATTGCTGCAACCCTC-GTTCCT
1 GCCGGGGATCGGTC-GGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCG
* * * *
5740403 GTCTGATCTTGGATTGGGAATGAACTCCGTATCCCTAAGCCAACCGACGAAAC--G-A-GTGGGC
64 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGC
* * *
5740464 GGGCGGGCGGGCAGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
129 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
*
5740529 GGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
194 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
5740594 TCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
259 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* * * * * * * *
5740659 CACGATTTTTGAAACTATTTGCGGTTCATGATTTTTTAAAATTTTTTCGAAAGGTGTTTTAGCCC
324 CATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* *
5740724 CAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTC
* *
5740789 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTCATGGCTAC
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
5740854 TGGCAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGAGGTGTGAGTTCTCGAGGTTTGATGAG
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
*
5740919 GGATA-AGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * * * * *
5740983 TGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCTATGCTCTGGCGATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * * *
5741048 TTCCTCGATGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCTGCAACCCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * * *
5741113 CGGTCTGGTCCGATCTTAGAATGGGAATAAACTCTGTATGCTTAGACTGGGAATGAACTCCATAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* ** * * * *
5741178 GCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAAACGGCTAGAGGGGCAGGATGTGAAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * *
5741242 GTCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCGCAACCCTC-GATCTGA
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGG
**
5741306 T-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTAACGAAACGA--A--CGGGC
65 TCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGC
* * * * * *
5741366 AGACGGGCGGGCGTGCACTACGCCGGCCAGAGAGACGGGATGCCCAAGCCGTGGATTGATAAGGT
129 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
5741431 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
194 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
5741496 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTT
259 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* ** * * * *
5741561 CACGATTTTCGAAACTTTTTGTGGTTCGGGATTTTTTAAAATTGTTTT-GGAAGGAGTTTTAGCC
324 CATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATT-TTTTCGGAAGGAGTTTTGGCC
* * * * *
5741625 ACAACCTTGGAAGACGTGATCCTTTTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACT
388 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* * *
5741690 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATACTTTAAAGGCTA
453 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
** *
5741755 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGCTTTGATGA
518 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* * *
5741820 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACCCATCGCACATCACGTGCGCAAACCCCC
583 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC
** * * * * **
5741885 CCGGCCCCCCCGATCACCGGAAACCTAATGCCGCCAGTCAGGTTCTCCGACGATGCTCCGGTGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * ** *
5741950 GGTGCCCCCG-CGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCACATGCTACCGCAAC
712 GGTG-CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
* * *
5742014 CCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATTGGGAATGAACTCCG
776 CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCG
* * * * *
5742079 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTTAGCAGGCCAGAGGGGTGGGATACGC
841 TATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGC
5742144 AA
906 AA
* * * ** * * ** *
5742146 GTCGGGGATTGGCCGGGTCCCCCTCTGCATGCTGCCAATCCTGCTACCATAACCCTC-GATCTGG
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGG
** * * * * *
5742210 TCCCATCTTAGACTAGGAATGCACTCCGTATACCTAAGCCAACCGACAAAAAGAGCAGGC---C-
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* ** * * * * *
5742271 GACAAGCGAGCGGGCACTATGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGGTTGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
5742336 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* *
5742401 CATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
** ** * * * * *
5742466 ATGATTTTCGAAACTTTTTATGGTTCAGGATTTCTTAAACTTTTTTCAGAAGGAGTTTTGGTCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
5742531 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC-AACAAACTC
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAA-AAACTC
* * * *
5742595 GAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTTAGACACTTTAATGGCTAC
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * **
5742660 TAGCAGCAAACCTGTGAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAG
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
** * * *
5742725 GGATAGGGGGCCAATATAAGGGATAAGTACTAGCACCAATCACACATCATGTGCGCACA-CCCCC
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
* * **
5742789 GG-CCCGCCGATCGCCGGAACCCCAATGCCGCCAATCAGG-T-T----C--T-C-CCG-CGATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * * * *
5742842 TGCCCTGACAAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCAGTCGCAACCCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * * ** * * *
5742907 TGATCCAATTCGATCTTAGACTGGGAATGAACTCAATATGCTTAGATTAGGAATGAACTCCGCAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * * *
5742972 GCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCAGGCTAGAGGGGTGGGATGCGCAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * ** * ** * *
5743036 GCCGGGGATCGATCGGGTCCCCCGCTACGTGCTGCCGATCCTACTATCGAAACCCTCAGTCTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* *
5743101 CTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACGAAATGAGCA--------G
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * * * * *
5743158 ACGGGCGGGTGGGCACTACTCCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAAGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
5743223 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
*
5743288 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACGACTCGTTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * *
5743353 TGATTTTTAAAACTTTTTTCGGTTC-GAGATTTTTTCAAATTTTTTCGGAAGGATTTTTGGCCCC
326 TGATTTTTAAAACTTTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* *
5743417 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG-AGTGCACAAAACAATTCATCTAAAAACTC
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTC
* * *
5743481 GAAGTGTACAAGATATTGTGACAATTTGAAAAAAAG-GTCCCCATTTCAGACACTTTAATGGCTA
454 AAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
*
5743545 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
518 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* * * * **
5743610 GGGATAGGGGGCCAATATAAGGGCCAATTACCATCACCCATCACACATCATGTACG--C-CGGCC
583 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* *** ** * *** ** ** * ** *
5743672 AGAG-AGACGGGAT-G-CGCAAGCCTTGGATCGATAGGGTGGT-AGGTTGGTTTAGGCACAT-CT
648 CG-GCCCCCCCGATCGTCGGAA-CC-CCAAT-G--CCGCCGGTCAGGTT--CTCCGGC-GATGCT
* * * ** * * * ***** ** * * *
5743732 TC-A-TATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCA-TACAATGGTCCCTTAAG
704 CCGACGA--T-GGTGCCCCGACG-AAGAAAAAT-GC--G-GCA-CCAGCAC-AT-G-CCC--GAG
* * * * * * * * * ** ****
5743794 CCTTCACGTTAAGTTTCATGGC-CAGACGACTC-GT---TTTCTATTTTTCAC-GATTTTTGAAA
755 CC--CA-G-CATG-TGC-TGCCGCA-AC-CCTCGGTCCGATCCGATCTTAGACTG-GGAATG-AA
*** * * * * ** **** * * *** *** **
5743853 CTTTTTACGGTTTGGGATTTTTGAAAATTTTTTCAGAAAT-CCTTTTTTGGCCC-C-AAACTTG-
810 CTCCGTA-TGCTT-AGA---CTGGGAATGAACTCCG-TATGCCTAAGTCAACCCACGAAACGAGC
** * ** * **** ** * *
5743914 GTG-GAGATGATC--CTTG-TATTTTTGTTGGCATGCACAA
869 GTGCG-GGCGCTCAGCCGGCCA-GAGGGGCGGGATGCGCAA
**** ** * **** * * * ** * ** * ***
5743951 ---AAAAAT---TTAGCTAAAAACTC-GAAGTG-TACAAGATTTTG-TGAC-C-A-TTTGAAAAA
1 GCCGGGGATCGGTCGGGT-CCCCCTCTG-TGTGCTGC-CGATCCTGCTGCCGCAACCCT-CAGTC
* ** ** * * * *
5744004 AGTGTCCCCAT-TTCAGACACT-TTAATG-GCTAC-TA-G-C--AGCAAACCTGTAAAATCTTAA
62 CG-GT-CTGATCTT-AG--ACTGGGAATGAACTCCGTATGCCTAAGCCAACC-G----A-C-GAA
* ** * * * * ** * * *
5744061 ATGCTCTTTAAGG-GGGTGTGAGTTCTCGAGGTTTGATGAGGG-A-TA-GGGGGCCA-ATATAAA
115 ACGAGC----AGGCGGGCG-G-G----CG-GG--CG-GGCGGGCACTACGCCGGCCAGAGA-GAC
* * ** * ** * *** ********* * ** *
5744121 GGCAAAGTACCAGCAC--CCATCGCACATCAT-GTACGCACACCCCCCGGC-C-CCCCCA-ATCA
165 GG-GATGCGCAAGC-CGTGGATCG-ATAGGGTGGTA-G-GTGGGTTTAGGCACATCTTCATAT-T
* * * ** * ** * * ** * * * *** ** *** *
5744180 CCGGAACCCCAATGCCGTCGGTCA-GG-TTCTCCAGTGATGCTCCGGT-GATGGTGCC-CCAACG
224 TCTGCATGCCAATGCCAT-TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC-ACG
* *** * * *** * * * ** ****
5744241 AAGAAAAAT-ACGGCACCAGCAC-ATGCCCG-AGCCTAGCATGTGC-TGCA---GCAAAACCCGG
287 -TGAAGTTTCATGGCA--AG-ACGA--CTCGTTTTCTA--TTTTTCATG-ATTTTTAAAACTTTT
* * * * * * * * ** *
5744299 TCCAG--TC-CGA--TCTTAGAA-----TGGGAATGAACTCCGTAT-G-CTTAGAC-TGG--GA-
343 TGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAA-GGAGT---TTTGGCCCCAAACTTGGTAGAC
* *** ** * ** * * ** ***** **
5744348 ATGAACTCC--GTATGCCT-AAGTCAACCAACAAAACAAGTGTGC-GGGCGCTC--AGTTGGCCA
403 GTG-A-TCCTTGTATTTTTGTTGGCATGC-ACAAAAAAATTCAGCTAAAAACTCAAAG-TGTACA
***** * ** ** ** * * ** * *
5744407 GAGGGGCGGGATGCACAAGTCGGGGATCGATCGGGTTCCCC---TCTG-CGTGTTGTCGAT-CCT
464 -A-GATTTTG-TG-ACCA-T--TTGA-AAAAAGTG-TCCCCATTTCAGAC-ACTT-T-AATGGCT
* * * ** ***
5744467 ACT-ACCGCAACCCTCGGTCCGATCCGATCTCAGACTAGGAATGAACTCCGTATGCCTAA-GCCA
517 ACTGGCAGCAAACCT--GT---A--AAATCT----C-A--AATG--CT-C-T-T---TAAGGGGG
*** *** *** * * * * * *
5744530 ACCGACG-AAACAAGCGGGCGA-GCGGG--CGGGCGGGC-ACA-ACGCCGGCCAGAG-A-GATGG
560 TGTGA-GTTCTCAAG-GTTTGATGAGGGATAGGG-GGCCAATATAAG--GGCCA-AGTACCA--G
* * * ** * * * ****** * ** * *
5744587 GATGCGCAAGACGTGCATCGATAGGGTG-ATAGGTGGGTTTAGGCACATCTTC-ATAGTTC-TAC
617 CA--C-CCA-TCGCACATC-AT-GTGCGCACA----CCCCCCGGC-C-CCCCCGATCG-TCGGA-
** **** * ** * ** * * * *
5744649 ATGCCAATGCC-ATTTTTATGGTT-T---GTTA-GTTCATACAATAGTCCCTTAAGCCTTCACG-
668 ACCCCAATGCCGCCGGTCA-GGTTCTCCGGCGATGCTCCGACGATGGTGCC-----CC--GACGA
* ** * * * * ***** ***** ** *** * **
5744707 TG-AAGTTTCATGGCAAGACGGCTCATTTTTTA-TTTTTCAT-TATTTTTGAAACTTTTTACGGT
725 AGAAAAATGC--GGC-A-CCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC--CCT-CGGT
* * * ** * * * * ** * *
5744769 TCGA---GATTTTTTAAAATTTCTTCGAAAGGAGT---TTTGGCCCCAAACTTGGTAGACGTG-A
783 CCGATCCGA--TCTT-AGA---CTGGGAATGAACTCCGTAT-G-CTTAGAC-TGG--GA-ATGAA
* ** * *** * * * * ***** * * *
5744827 -TCCTTGTA-G-TTTTGTTGGAGTGCACAAAACAATTCAT-CTAAAAACTCGAAG-TGTACAAGA
836 CTCC--GTATGCCTAAG-T-CAACCCACGAAACGA-GCGTGC-GGGCGCTC--AGCCG-GCCAGA
*** * ** **
5744887 TATTGTGACAATTTG-AA
892 -GGGGCG-GGATGCGCAA
****** ** *** * * * * * * * ** *
5744904 AAAAAAG-TC-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTG-TAAAATCTCAAAT
1 GCCGGGGATCGGTCGGGTC--CCCCTCT-GT-G-TGCT-GC--CGATCCTGCT---GCCGC-AA-
* * ** * * ** * ** *** **
5744966 TCTCTTTAAG-GGGGTGTGAGTTCTT-GAGGTTTG-ATGAGGGA-T-AG-GGGCC-AATATAAGG
53 -C-C-CTCAGTCCGGTCTGA--TCTTAGA-CTGGGAATGA---ACTCCGTATGCCTAAGCCAACC
* * * * ** *** ** * * *
5745024 GCCAAATACCATCA--C---C---C-ATCACAC-ATCATGTACCCCGGCCAAAGAGACGGGATGC
109 GACGAA-ACGAGCAGGCGGGCGGGCGGGCGGGCGGGCA-CTACGCCGGCCAGAGAGACGGGATGC
* * **
5745079 GCAAGCCTTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATTTCTGTGTGCCAAT
172 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAAT
* *
5745144 GCCATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCA
237 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * * *
5745209 AGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTT-GGGATTTTTGAAAAT
302 AGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAAT
* ****
5745273 TTTTTCAGAAATCCTTTTTTGGCCCCAAACTTGGTAGA-GATGATCCTTGTATTTTTGTTGGCAT
366 TTTTTC-GGAA-GGAGTTTTGGCCCCAAACTTGGTAGACG-TGATCCTTGTATTTTTGTTGGCAT
* * *
5745337 GCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAATGTC
428 GCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
* * *
5745402 CCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTTAAATGCTCTTTAAGGG
493 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * *
5745467 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCAAAGTACCAGCACCCA
558 GGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* ** *
5745532 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCAATCACCGGAACCCCAATGCCGTCGGTCAG
623 TCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAG
* * * * *
5745597 GTTCTCCAGTGATGCTCCGGCGATGGTGACCCGACGAAGAAAAATACGGCACCAGCACATGCCCG
688 GTTCTCCGGCGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCG
* * * * * *
5745662 AGCCCAGCATGCGCTGCAGCAAAACCT-GATCC-AGTCCGATCTTAGAATGGGAATGAACTTCGT
753 AGCCCAGCATGTGCTGCCGC-AACCCTCGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGT
* * * * * *
5745725 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCCCAAAACAAGTGTGCGGGTGCCC
816 ATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
** *
5745790 AGTTGGCCAGAGGGGCGGGATGCGTAA
881 AGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * * * * * ** * *
5745817 GTCGGGGCTCGATCGGGTTCCCCTCTGCGTGTTGTCGATCCTACTGCTGCAACCCTTGGTTCGAT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * *
5745882 CTGATATTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC-A--A-GCGGGCGA
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* *
5745943 GCGGGCGGGCGGGCA-TGACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGCATCGATAGGGTG
131 GCGGGCGGGCGGGCACT-ACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* * * * * * *
5746007 ATAGGTGGGTTTAGGCACATCTTCATAGTTCTACGTGCCAATGCCATTTTTATGGTTTGTTACTT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * * * *
5746072 CATACAAAGGTCCCTTAAGCCTTCACGCGAAGTTTCATGGCAAGACGGCTCATTTTTTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * *
5746137 ATGATTTTTGAAACTTTTTACGGTTTGA-GATTTTTTAAAATTTCTTCGAAAGGAGTTTTGACCC
325 ATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* * *
5746201 CAAACTTGGTAGACGTGATTCTTGTATTTTT-TTGGGCATGCACAAAAAAGTTGAGCTAAAAACT
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTT-GGCATGCACAAAAAAATTCAGCTAAAAACT
* * * *
5746265 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAATTGTCTTCAATTT-AGACACTTTAATGGCT
453 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC-CCCATTTCAGACACTTTAATGGCT
** **
5746329 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCATGAGTTCTTGAGGTTTGATG
517 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
*
5746394 AGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
582 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
** * * *
5746459 CTAGCACCCCCGATCGTCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGA-
* * *
5746524 GCTCTGGCGACGATGCCCCGACAAAGAAAAATGTGACACCAGCACATGCCCGAGCCCAGCATGTG
711 ----T---G--G-TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTG
* * *
5746589 CTGCCACAACCCTCGGTCTGATTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
766 CTGCCGCAACCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
*
5746654 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGG
831 ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGG
*
5746719 CGGAATGCGCAA
896 CGGGATGCGCAA
* * * * ** * * ** *
5746731 GTCGGGGACCGATCGGGTTCCCCTCTGCATGCTGCCGATCCTACGGTTGCAACCCTCGGTCCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * *
5746796 CTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACTGATGAAAC--G-A---------
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* *
5746849 GCGGGCGGGCGGG-ACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*
5746913 TAGGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * * * *
5746978 ATACAATGGTCCCTTAAACCTTCACGTGAAGTTTCATGGCAAAACCACTAGTTTTCTGTTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * * * * *
5747043 TGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAATTTTTTTTGAAAGGCATTTTTGG-CCC
326 TGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTGGCCCC
* * *
5747107 AAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCTTGCACAAAAAAATTCAGCTAAAAACTCG
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
** * *
5747172 AAGTGTACAAGATTTTGTCTCCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTAGT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
*
5747237 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTTAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* *
5747302 GATAGGGGGCCAATATAAGGGCCATGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCC
** * * * * * *
5747367 CGTTCCCCCCGATCGCCTGAACCCAAATGCCGCCAGTCAGGTTCTCCGGTGATGC-CCTGGCGAT
648 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCC-GACGAT
* ** * * *
5747431 GGTGCCCTGACGAAGAAAAATGTAGCACCAGGACATGCCCGAGCCCAGCATGTGCTGTCGAAACC
712 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* *
5747496 CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGT
777 CTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * * *
5747561 ATGCCTAAGTGAACCCACGAAGCGAGCATGCGGTCACTCAGCCTGCCAGAGGGGCGGGATGCGCA
842 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
5747626 A
907 A
* * * ** *
5747627 GCCGAGGATCGATCGGGT-CCCC-C----T-CTG-CG----TGCTGCCGTAACCCTTGGTCTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * *
5747680 CTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAAC--G-A---------
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * * ***
5747733 ----GCGGACGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGTAATGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* * * * * * *
5747794 GAGGTGGGTTTGGGCACATATTCATATTTCTGCTTGCCAGTTCCATTTTTATGGCTTCTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * * *
5747859 ATACAATGGTCCCTTAAGCCTTCTCGTGCAGTTTCATGGGAAGACGACTCGTTTTTTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * *
5747924 CGATTTTTGAAACTTTTTCCGATTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCA
326 TGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
*
5747989 AACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACT-AG
391 AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA-
* *
5748053 AACTGTACAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
*
5748117 GGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* * *
5748182 GATAGGGGGCCAATATAAGGTCCAAGTACCAGCACCCATCACACATCATGTGTGCACACCCCCCC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC
* * * * *
5748247 TGGCCCCCCCGATCGTCGGAACCCCAATGCAGCCAGTCAGGTTCTCCAGTGATGCTCCGATGATG
649 -GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATG
* ** * *
5748312 GTG-CCCGACGAAGAAAAATGCAGCACCAGCACATGCCTAAGCCCAGCATGTACTGCCGCAACAC
713 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* ** *** * **
5748376 TCGGTTCGGCCCGATCTTAGACTGGGAATGAACTTAATATGCCTA-A----G--CCAA--CCG-A
778 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * **** ** * * * *
5748431 ---CGAA-ACGAGATGGGCG-GGCGGGCAG-GCGGGCACT-ACGCCGGCCAGAGAGACGGGATGC
843 TGCCTAAGTC-A-ACCCACGAAACGAGC-GTGCGGGCGCTCA-GCCGGCCAGAGGGGCGGGATGC
5748489 GCAA
904 GCAA
* *
5748493 GCCGTGGATTGATAGAGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCC-
1 GCCG-GG---GAT----CGGT---CGGG--T---C-C--C--C----CTCTGTGTG-C--TGCCG
** ** * * ** * * * ** * * *
5748557 ATTTTTATGGCTTGTAA-ATTCA-TACAATGGTC---CCTTAAGCCT-TCACGTGAAGT--TTCA
38 ATCCTGCT-GC-CGCAACCCTCAGT-C--CGGTCTGATCTT-AGACTGGGA-ATGAACTCCGT-A
* * * ** * * * * ** ** * ******
5748614 TGAC-AAGACGACTCCTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTCGGGATTTTTT
95 TGCCTAAG-CCA-ACC--GACGA-----AACGA---GC-AGGC---GGGCGG-GCGGG-CGGGCG
*** * *** *** * * ** * * *** * *
5748678 AAAATTATTTCGG--A-AG-GA-GTTTTCACCCAAAACTTGG-TAGACGTGATCCTTGTA--T-T
142 GGCACTACGCCGGCCAGAGAGACGGGAT-GCGCAAGCCGTGGATCGA--T-AGGGTGGTAGGTGG
* * *** * * * ** * * * *
5748734 TTTCTTGGCATGCAT-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATT-
203 GTT-TAGGCA--CATCTTCATATTTCTGC---ATGC-C-AA-TG--CCA-TTTTTATG-GC-TTG
* * * * *
5748797 TGAAA---A-A-AAT-GTCCCCATTTCAGACACTTTA-ATG--G-CT-ATTGGC-AG-CAAAC-C
254 T-AAATTCATACAATGGT-CCC--TTAAG-C-CTTCACGTGAAGTTTCA-TGGCAAGAC-GACTC
* *** * *** * * **** * * * *
5748848 -TGTAAAATCTCAAATGCTCTTTAAGGGGTTGTGAGTTCTCAAGG-TTTGATGAGGGATACGGGG
311 GTTTTCTATTTTTCATGATTTTTAAAACTTTTTGCGTT-TC-AGGATTT-TTTA---A-A-----
* * ** *** *** * * * *** * *
5748911 CCA-ATATAAGGGCTGAGTTCCAGCACCCATCGCCCATCATGTGCGCACAC--CCCCCAATCGGA
364 --ATTTTTTCGGAAGGAGTTTTGGC-CCCA------AAC-T-TG-GTAGACGTGATCC--TTGTA
***** * *** * * * ** * * * * *
5748973 TCCCCCTAT-GCGTGCTATCAATCCTACTGCCG-TAACCTTCACTC-CAGTCTGATCTTAGACTG
415 TTTTTGT-TGGCATGC-A-CAA-AAAAATTCAGCTAA---AAACTCAAAGTGT-A-C-AAGATTT
* * * *** **** * *** **** * * * *
5749035 GGAATTTACTCCATATG-CCTAAGCCAACCGATGAAATGAGCAGGCGAGTGGGTGC--GCGGGCA
470 TG---TGA--CCATTTGAAAAAAGTGTCCCCATTTCA-GA-CACTTTAATGGCTACTGGC-AGCA
* * * ** * * ** * * *
5749097 CTACGTCGGCTAGAGA-GACAGGATGCGC---AA-GCCGTG-GA--TC-GATAGG-GTGGT-AGG
527 -AAC--CTG-TA-AAATCTCA-AATGCTCTTTAAGGGGGTGTGAGTTCTCA-AGGTTTGATGA-G
*** * * * * ***** * **** *
5749151 TGGATTTAGGCACATCTTCATATTTCTATGTGCCAA-TGCCA-TTTTTATAGGTTGTAAAT-T-C
584 -GGA--TAGG--GGGC--CA-A--TATAAGGGCCAAGTACCAGCACCCATCGCACAT-CATGTGC
* **** ** * * * *** *** * * *
5749212 ACACAATGGTCCCTTAAGCCTTCACGTTAAGT-TTCATGACAA-GACGACTCGTTTTCTA--TTT
638 GCAC-A----CCCCCCGGCCCCCCCGAT-CGTCGGAACCCCAATGCCG-C-CG--GTC-AGGTTC
* * ** ** * ** ** ** * * * ** ***
5749273 TTC-ACGATTTTCAAAAC-TTTTTGCAGTTCGA-GATTTTTTAAAATTTTTTCGGAAGAAG-TTT
692 TCCGGCGATGCTC-CGACGATGGTGC--CCCGACGA----AGAAAA---ATGCGGCACCAGCACA
* * ** * * ** ** * * *
5749334 TGGCCCCAAACTTGGAAG-ATGTGAT-CCTTG-TA-TTTTTGTTCGCATCCATAAAAATATTCAG
747 T-GCCC-GAGC---CCAGCATGTGCTGCC--GCAACCCTCGGTCCG-ATCC-----GATCTT-AG
** * ** * * * ** ** *
5749395 -CT-AAAAT-ATCGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCATATCAGACA
798 ACTGGGAATGAAC--TCCGT--ATG--CTT-AGA-C-TGGGAATGAA----CTCCGTAT--G-C-
* * * *** * * * * ** **
5749457 CTTTAATGGCTA-CTAGCAGCAAACCTGTAAAATATCAAGTGCTCTTTAAGGGGGTGTAAGTTCT
846 C--TAA-GTCAACCCA-C-G-AAA-C-G-AGCGT-GC--GGGCGC--TCA-GCCG-GCCAG----
* *** * *
5749521 CGGGGTTTGATGAGGGATA
891 AGGGGCGGGATG-CGCA-A
* * *** * **** * * * *
5749540 G--GGGGCCAAT--TTAAGGG-CCAAGTACCAGCACCCAGCACACATCATG-TG-CGCACACCCC
1 GCCGGGG---ATCGGT-CGGGTCCCCCT--CTGTGTGCTGC-C-GATCCTGCTGCCGCA-ACCCT
* * *** * ** * *** * * * * * * * ***
5749598 CCGGCCCCCCCGATCGCCGAAAC-CCCAATG-CCGCCGGTCAGGTTCT---CCGA-TGATGCTCC
57 CAGTCCGGTCTGAT--CTTAGACTGGGAATGAACTCC-GT-ATG-CCTAAGCCAACCGACGAAAC
* ** ** ** ****** * * * * * *
5749657 G-GCGATGGTGCCCCAATGAAGAAAAATGTGGCACCA-GCACATGCCTGAGCCCAGCATGTGCTG
117 GAGC-A-GGCG-GGC-GGGCGGGCGGGCG-GGCACTACGC-C-GGCCAGAG---AG-ACGGGATG
* ** ** ** * * *
5749720 TCGCAA-CCGTCTGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCA-ACCC
171 -CGCAAGCCG--TG---GATC-GA---TAGGGT-GG--T-AGGTGGGT-T---T-AGGCACATCT
* * *** * * * ****** * * * ** *
5749783 ACGAAACGGGCGTGC-GGGCACGTAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGAT-CGAT
217 TC-ATA-TTTC-TGCATGCCA-AT-GCCATTTTTA-TGGC---TTGTA-AATTC----ATACAAT
* ** * * * * * *
5749846 CGGGT-CC----GCCTCTACATGCTGCCGATCCTACTGCCGC-A-AC-CCTCGGTCTGATCCAAT
268 --GGTCCCTTAAGCCT-T-CACG-TGAAGTTTC-A-TG--GCAAGACGACTC-GT-T-TTCTATT
* *** * * * * ***** ****** *
5749903 TTT-AT-ACTGCGAATGAACTCCGTATGC--CTAAGCGA-ACCGAAAAAAACGAGCGGACGGGCG
321 TTTCATGATTTTTAA--AACT--TTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGA-----A
* *** * ** * * * * * ** *
5749963 GGCGTGCGGGCGGGCCCTACACCGGCCAGAGAGACGACATGCGCAAGCCGTGGATCGATAGGGTG
376 GGAGTTTTGGC---CCC-AAACTTG---G-TAGACG---T--G--ATCCTTGTAT--TTTTGTTG
* ***** *** * ** * ***** * * *
5750028 GTAGGTGGGTTTAGGCA--CATCTTTATA-TTTTTTTGTGCCAATGCCATTTTTATG-GC--TTG
424 GCA--TGCACAAAAAAATTCAGCTAAAAACTCAAAGTGT-ACAA-G--A-TTTTGTGACCATTTG
* * * * * * *** *
5750087 TAAATTCATACAGTGGT-CCC--TTAAG-C-CTTCACGTGAAGTTTCATGGCA--AGACGACT-C
482 -AAA---A-A-AGT-GTCCCCATTTCAGACACTTTA-ATG--GCTAC-TGGCAGCAAACCTGTAA
* * * * * *** * * * * * * *******
5750144 ATTTTC-TAT--T-TTTCATGATTTTTGAAACTTTTTACGG--T--T-CGGGAT-TTTTTTAAAT
536 AATCTCAAATGCTCTTTAAGGGGGTGTG--AGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAA-
* * **** * * * **********
5750199 TTTTTGAAAGG---AGTTTTGGC-CCCA----A-A-CTTGGTAGACGTGA-TCCCTATATTTTTT
598 --TAT-AAGGGCCAAGTACCAGCACCCATCGCACATCAT-GT-G-CG-CACACCCCCCGGCCCCC
** * * * **** * * **** ** * * * *
5750253 TTG-GCAT-GCAAAAAAAATTCAG-C--T-AAAAACT-CGAAG-TG-TAC-AAGATTTTGTG-AC
656 CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGA--TGGTGCCC
** * * ** * * *** * * *
5750307 C-ATTTAA-AAAAA-G-TG-TCC--C-CATTTCAGA-CACTTTAGTGGCTACTGGCAGCAAACCT
719 CGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA-T-G-TGCT-GCCGCAACCCT
*** * * * ** * * * * * * **
5750363 --GTAAAATCTCAAATGCTCTTTGA-GGGGTGTG-AGTTC-TCAAGGTTTGA-TGAGGGATAGGG
779 CGGTCCGATC-C----GATCTTAGACTGGGAATGAACTCCGT-ATGCTTAGACTG-GGAAT-GAA
** * * * * * ** * * * **
5750422 GGCCACTATAAGGGCAAAGTACCAGCACCCATCGCACATC-A-TGTGCGCACACCCCCTGGCCCC
836 CTCC-GTAT---GCCTAAGT--CA--ACCCA-CG-A-AACGAGCGTGCG--GGCGCTC-AGCCGG
* ** * * ** *
5750485 CCTGATCGTC-AGAACCCCAA
887 CCAGAGGGGCGGGATGCGCAA
* * * * ** * * *
5750505 TGTCGCCGG-TCAGGTTCTCTGACGATGCTCCGAC-GATGGTGCCCCGACGAAGAAAAAT-ATGG
1 -GCCG-GGGATC-GG---TC-G--GGT-CCCCCTCTG-T-GTG--CTG-C--CG----ATCCT-G
* * * * * * *
5750567 C-ACCGGCACATGCCC-GAGCCCAGCATGTGCTACCGCAACCCTTGGTCCAGTCCGATCTTAGAC
44 CTGCC-GCA-A--CCCTCAGTCC-G---GT-CT---G--A-TC-T--T--AGACTGG--------
* ** * * *
5750630 TGGGAATGAACTCCGTATGCCTAAGTCAACCCCCGAAACGAGCA------------TGTGGAC--
81 ---GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGGGCGGGCGGGCGG
* * * * * ** ** *
5750681 GCTC-A-GCCGGCCAGAGGGCCGGGATGCGCAAGTCGAGGATCGACCGGGTCCCCCACTACGT--
143 GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT-----GGTAGGTGG
* *** * * * ** * * * * * *
5750742 GCTGCCGCAACCCTCAGTTCGGTCCAATCTT-AG-ACTGGGAATG-AACTCTGTATGCCTAAGCC
203 GTTTAGGC-A-CATC--TTC-AT---AT-TTCTGCA-TGCCAATGCCA-TTTTTATGGCT-TG-T
*** * ** * * *** * * ***
5750804 AACCGACGAAACGAGCGGGCGGACGTGCGGGCACTACGCCG-GCCAGAGAGACGGGATGTGCAAG
255 AA-ATTC-ATAC-AATGGTC---CCT-TAAGC-CTTC-ACGTG--A-AGTTTC---ATG-GCAAG
* * ** * * * * * * **
5750868 CCGTGGA-TCGATAGGGTGGTAGGTGGGTTT-ATGCACATCTTCATA-TTTTTACGTGCCAATGC
304 AC---GACTCG-T---TTTCTA--T--TTTTCATG-A-TTTTTAAAACTTTTTGCGTTTC-A-G-
* *** * ** * * * *
5750930 CA-TTTTTATGGCTTGTAAATTCATACAGTG-GTCTCTTAAGCCTTC--ACGTGAAGTTTCATGG
353 GATTTTTTA-AAATT-T--TTTCGGA-AG-GAGT-T-TT-GGCC-CCAAACTTG--G--T-A-GA
* * * * ** * ** **** * * *
5750991 CGAGA-CGACTCGT-TTTCTATT----T-TTC-AAGATTTTC-G----AAACTTTTTGCGGTTCG
402 CGTGATC--CTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAG-TGTACA
* * *** *
5751043 AGATTGTT-TAAGATCTTTTCAGAAAGATTTTTGGCCCCAAACTTGGT-AGACATTATCCTTGT-
464 AGATT-TTGT--GACCATTT--GAAA-A-AAGTGTCCCC--A-TT--TCAGAC---A--CTT-TA
*** ** * * * * ** ****
5751105 ATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAAACTCGAA-G-TGTACAAGATTTTGTGA--
511 ATGGCTACTGGCA-G--C--AAAC---CTG-TAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * * ** * * * * *
5751166 -C-C-A--TTTGA--A--AAAAGTGTCCCCATTTCA-GACACTTTAATGGCTACGGGCAGCAAAC
567 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC-C---AA--G-TAC---CAGC-ACC
* * * ****** **** * * *
5751221 C-T-GTAAAATC-TGAAATGCTCTTTA-AGGGGGTGTGAGTTCTCGAGGTTTGGTGAGGGATAGG
621 CATCG-CACATCATG---TGCGC---ACACCCCCCG-GCCCCCCCGA----TCGT--CGGA-A--
* * * * * ** **
5751282 GGGCCAATATAAGGGCCAAGTACCAG-CACCGATCGTACATCATGTGCGCACAC-CCCCCGA---
669 --CCCCA-AT----GCC--G--CCGGTCA--G---GTTC-TC-CG-GCG-ATGCTCCGACGATGG
** *** * * **
5751342 CCCCCCGATCGCCCAAACCCCATTGCCGC-CGGTCAGGTTCTCCGACGATGGTGCCCCGA-CGAA
714 TGCCCCGA-CGAAGAAA----AATGCGGCAC---CA-G-----C-AC-A---TG-CCCGAGCCCA
* ** * * * * * * * * **
5751405 GAAAAATACGGCAC-CAGCACT-TG-CCTGACCCCGGCATGTGCTGTCGCAACCCTCGG--TCCA
759 G-CATGTGCTGC-CGCAACCCTCGGTCC-GA-TCC-G-A--T-CT-TAG--A--CTGGGAATGAA
* * *
5751465 GTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTACACTGGGAATGAACTCCGTATGCCTAAG
810 CTCCG-T-AT-G------------CT---TA-G-----ACTGGGAATGAACTCCGTATGCCTAAG
* * * *
5751530 TTAACCCACGAAACGAGCGTACGGGCGCTCAACCGGCCAGAGGGGCGGGATGCGAAA
851 TCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * *
5751587 GCCGAGGATCGGTCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTGCCGCAACCCTCAGTCCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * * *
5751652 CAGATCTTAGACTAGGAATGAACTCTGTACGCCTAAGCCAACCAACGAAACGA--A------CGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * * *
5751709 GTGGGTGGGCGGGCACTACGCCGGCCATAGAGACGGGATGTGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
*** *
5751774 TAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCGAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* *
5751839 ATACAATGGTCCCTTAAGCCTTCTCGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * * *
5751904 CGATTTTCT-AAACTTTTTGTGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGCGTTTTGGCCCC
326 TGATTTT-TAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * * * * *
5751968 AAACTTTGTAGACGTGATACTTTTATTTTTGTAGGCATGCACAAAACAATTCAGCTAAAAACTCG
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
* * * *
5752033 AAGTGTGCAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCAGACCCTTTAATGGCTATT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * **
5752098 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTATGGGGGTGTGAGTTCTTGAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* * * *
5752163 GATAGGGGGCCAATATAAGGGCCAAGTACTAGTACCCATCACCCATCATGTGCGCACACCCCCCC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC
* * * ** * *
5752228 GACCCCCCCGATCATTGGAACCATAATGCCGCTGGTTAGGTTCT-C--CGA---T-----GATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * * ** *
5752282 TGCCCCGATGAATAAAAATGTGGCACCAGCACATGCCCGAAACCAGCATGTGCTGCCACAACCCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * * *
5752347 CGG-CCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTGGACCGGGAATGAACTCCGTA
779 CGGTCCGA-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * ** * * * * *
5752411 TGCCTAAGTTAACACACAAAATAAGCGAGCAGGCACTCAACCGGCCAGAGGGGCGGGATGCGCAT
843 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * *
5752476 GCCGGGGATTGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCACAACCCTTAGTCCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * * * *
5752541 -TGGCTCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCGACTGATGAAA--TG-A--------
66 CT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* * * * *
5752594 -GCGGGCGGGCGGGAACTACGTCGACCAGAGAGATGGGATGCGCAAGCCATGGATCGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* * * *
5752658 GTAGGTGGGTTTAGGTACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
*
5752723 CATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * * *
5752788 ACGATTTTTAAAACTTTTTACGGTTCGGGATTTGTTAAAATTTTTTCGAAAGGAGTTTTAGCCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * * * *
5752853 AATCTTGGCAGACATGATCCTTTTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAATACTCA
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
*
5752918 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
5752983 GGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGCGGTGTGAGTTCTCGAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
* ** *
5753048 GATAGAGGGTGAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCACA-ACACCCCC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC-CCCCC
* ** * * ** ** *
5753112 GGCCCCCCCGATCGCCAAAACCCCAATACCGTCGGTCAGGTTCTCCGATGATGCTTTGGCGATGG
649 GGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGG
* * *
5753177 TGCCCCGACGAAGAAAAATGCAGCACCAGCACATGGCCGAGCCCAGCATGTGCTGCCGTAACCCT
714 TGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT
* * *
5753242 CGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCTTATGCTTAGACTGGGAATGAACTCCGTAT
779 CGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTAT
* * * *
5753307 GCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGTCGGCCAGAGGGACGGGATGTGCAA
844 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * * * * *
5753371 GCCGGGGATTGGTCGGGTCCCCCTCTGCT-TGCTGCCAATCTTGCAGCCACAACCCTCGGTCCGG
1 GCCGGGGATCGGTCGGGTCCCCCTCTG-TGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGG
*
5753435 TCT-AGTCTTAGATTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-A-GCGGGC
65 TCTGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGC
* * ** * * * * *
5753495 GGGTGGGCGCGCATGCACTACGTCGGCCAGAGAGACAGGATGCGCAAGTCGTGGATCAATAGGAT
129 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* *** * *
5753560 GGTAAGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGTCATTTTTATGGGTTGTAAAT
194 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
5753625 TCATACAATGGTCCCTTAAGCCTTCACTTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
259 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* *
5753690 CATGATTTTCAAAACTTTTTGCAGTTT-GGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
324 CATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
* * * * *
5753754 ACAAACTTGGTAGATGTGATCCTTGTATTTTT-TTCGCATCCATAAAAAAATTCAGCTAAAAACT
388 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
5753818 CGATGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
453 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* * * * *
5753883 CTGGCAACAAACCTGTAAAATATCAAGTGCTCTTTAAGGGGGTGTAAGTTCTCGAGGTTTGATGA
518 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* *
5753948 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCAATCGCACATCATGTGCACA-ACCCCC
583 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCC
* * * *
5754012 CCGGCCCCCCCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * * * *
5754077 GGTGCCCCGATGAACAAAAATGCAGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCGTAACC
712 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * * *
5754142 CTTGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCTTATGCTTAGACCGGGAATGAACTCCGT
777 CTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * * *
5754207 ATGCCTAAGTCAACCCATGAAACGAGCGTACAGGCGCTCAACCGGCCAGAGGGGCGGGATGTGCT
842 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
5754272 A
907 A
** * * *
5754273 GCCGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCTTGCTGCTGCAACCCTCGGTCCGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * *
5754338 CT-AGTCTT-GATTGGGAATGAACTCCGTATGCCTAAGCGAACCGACGAAAC--G-A-GCGGGCA
66 CTGA-TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* * * ** * *
5754397 GGCGGGCGCGCGTGCACTACGCTGGCCAGAGAGATAGGATGCGCAAGTCGTGGATCAATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
*
5754462 GTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
5754527 CATACAATGGTCCCTTAAGGCTTCACGTGAAGTTTCATGGCAAGACAACTCATTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * * * * *
5754592 ACGATTTCTAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGG-CCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * *
5754656 AAACTTGGCAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAACATTCAGCTAAAATCTCA
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
* *
5754721 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCACTTCAGACACATTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * ** **
5754785 GGCAGCAAACCTGTAAAATCCCAAATGCTTTTTAAGGATGTGTGAGTTCTTGAGGTTTGATGAGG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
*
5754850 GATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCTCTC
585 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CC-C-C
** * * * **
5754915 CCCCCGCCCCCCAATCTTCGGAACCCCACTGCCGCCTTTCAGG-T-T------A---TCCGACGA
647 CCGGC-CCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGA
* * *
5754969 TGGTGCCTCGACGAAGAAAAATACGGCACAAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAAC
711 TGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-
*
5755034 CCTCGCTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCTG
775 -C-C-CTC--G---G-TC-----C-------G-A-TCCG-AT-CTTAGACTGGGAATGAACTCCG
5755099 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
815 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
*
5755164 CAGTCGGCCAGAGGGGCGGGATGCGCAA
880 CAGCCGGCCAGAGGGGCGGGATGCGCAA
* * ** * * * * * * *
5755192 GACGGGGGATCGGTCGGGTCCCCCTCCGCATGTTACTGATCCTACTGCCGCAACCCTTAGTCTGA
1 G-CCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGG
** * * * * * * **
5755257 TCCAATCTTAAACTAGGAATGAACTCCATA-GCCTAAGCCAACCAATGAAAC--G-A-GTGGGTA
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
*** * * * *
5755317 GATAGGCGCGCGGGCACTACGTC-GCCAGAGAGACAGGATGCGCAAGCCGTGGATTGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* ***
5755381 GCAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * * *
5755446 CATACAACGGTCCCTTAAGCCTTCACGTTAAGTTTCATGGCAAGACCACTCGTTTGCTA-TTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* *
5755510 ATGATTTTTGAAACTTTTTGCGGTTT-GGGATTTTTTAAAATTTTTTCGGAAGGCA-TTTTGGCC
325 ATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGG-AGTTTTGGCC
*
5755573 CCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC-GACTAAAAAC
388 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG-CTAAAAAC
* *
5755637 TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT-CCCATTTCAGACACCTTAATGGCT
452 TCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
* ** *
5755701 ACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGAAGTGTGAGTTCTCGAGGTTTGATG
517 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
** *
5755766 AGGGATAGGGGGCCAATATAAGGGTGAAGTTCCAGCACCCATCGCACATCATGTGCGCACACCCC
582 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * * * * *
5755831 CCCGACACCCCGATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCCAGCGATGCTCCGGCGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * *
5755896 GGTGCCCCGATGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACC
712 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * * *
5755961 CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTGAGAACGAACTTCGT
777 CTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* *
5756026 ATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGTA
842 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
5756091 A
907 A
* * * * * * ** *
5756092 GCCGGGGATCGGTCGGGTCCCCCTCTATGTCCTGTCAATCCTGCTACCGTAACCCTC-GATTTGA
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGG
*
5756156 TCTGATCTTAGACTGGGAATGAACTCCGTATGTCTAAGCCAACCGACGAAAC--G-A-----GCG
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
** * * * * * *
5756213 GGCGGGCGGGCGGGCTTTTCGCCAGCCAGAGAGACGGGATGCGTAGGTCGTGGATTGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* * * * *
5756278 GTTGGTGGGTTTAGGCACATGTTTATATTTCTGCATGCCAAAGCCATTTTAATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
5756343 CATACAATGTTCCATTAAGCCTTCACGTGAAGTTTCAAGGCAAGACGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* ** * *
5756408 ACGATTTTCCAAACTTTTTGCGGTTC-GAGATTTTTTAAATTTTTTTCGGAAGGAGTTTTGGCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
* *
5756472 CAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCATGCA-AAAAAAAGGTCAGCTAAAAACT
389 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TTCAGCTAAAAACT
* * * * * *
5756536 CGAAGTGTTCAAGATTTTGTGGCCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAATTGCTA
453 CAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
* *
5756601 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTATAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
518 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
* * *
5756666 GAGATAGGGGGCCAATATAAGGGCTAAGTACCAGCACCCATCGCACATCATGTGTGCACA-CCCC
583 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * * * **
5756730 CTGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCAGTGATGTTTCGGTGATG
648 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATG
* * * * **
5756795 GTGCCCCAACGAAGAAAAATGCAGCACCAGCACATGCCCGAGCCCAGCATATGTTGTAGCAACCC
713 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * * * *
5756860 TCGGTTCGGTTCGATCTTAGACTAGGAATGAACTCCATATGCTTAGACTGGGAATGAACTCTGTA
778 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * ** *
5756925 TGCCTAAGTCAACGCACAAAACGAGCGTGCAAGCGCTCAGCCGGCCAAAGGGGCGGGATGCGCAA
843 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
* * ** * * * *
5756990 -CTCGGAGATTGACCGGGTCCCCCTCTATGTGCTGCCAATCTTGCTACCGCAACCCTCAGTCCGG
1 GC-CGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGG
** * * ** *
5757054 TCCAATCTTAGACTGGGTATGAACTCCATATGCCTAAGCCAACCGACGAAAC-A--A-GTAGGTG
65 TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* * ** * * **
5757115 GGCAGGCGGGTGGGCACTATACCGGCCAGAAAGATGGGACACGCAAGCCGTGGATCGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
* * ** *
5757180 GTAGGTGGGTTTCAGGCACATCTTCATGTTTTTGTGTGCCAATGCCATTTTTATGGCATGTAAAT
195 GTAGGTGGGTTT-AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
* * *
5757245 TCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCTTTTTTTATTTTT
259 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* ** * * * * *
5757310 CACGATTTTCCAAACATTTTACGGTTT-GGGATTTTTAAAAATTTTTTCGAAAGGAGTTTTGGCC
324 CATGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
* * * *
5757374 CCGAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCATAAAACAATTCAGCTAAAAACT
388 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
5757439 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCT
453 CAAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
** * *
5757504 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAAGTGTGAGTTCACGAGGTTTGATG
517 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
*
5757569 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCC
582 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC
* * *
5757634 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTTCGACGAT
647 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGAT
* * * **
5757699 GGTGCCCCGACGAAGAAAAATGCGTCACCAGCACATGCTCGAGCCCAGCATGTGGTGTTGCAACC
712 GGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACC
* * * * * * *
5757764 CTCGGTCTGGTCCGAGCTTAGACCGGAAATGAACTCCATATGCTTAGACTGGGAATGATCTCCGT
777 CTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGT
* * * * **
5757829 ATGCCTAAGTCAACCCACAAAACGAGCGTACGGGCGCTCAGCCGGCTAGAGGGGCAGGATGCATA
842 ATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCA
5757894 A
907 A
* * * * * * * * * **
5757895 GTCGAGGATTGATCGGGTCCCCCTCAGTGTGCTGTCGATCCTGCTACTGCAACCCTCGGTTTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* ** *
5757960 CCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAGTGACGAAA--TG-A-GCGGGCGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * ** * ** *
5758021 ACGGGCGGGCGAGCACTACATCGGCCTGAGAGGGGGGATGTGCAAGCCGTGGATCGATAGGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* *
5758086 TACGTGGGTTTAGGTACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
* * *
5758151 ATACAATGGTCCCTTAAGCCTTCCCGTCAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * *
5758216 TGATTTTTGAAACTTTTTGCGGTTT-GGGATTTTTTTAAATTTTTTCGGAAGGATTTTTGGCCCC
326 TGATTTTTAAAACTTTTTGC-GTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
** * * *
5758280 AAACTTGGTAGACGTGATCCTTGTAGCTTTGTTGGCATGCACAAATATATTCAGCTAAAAACTCG
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
* *
5758345 AACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACCCTTTAATGGCTACT
455 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
5758410 GGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTAAGATTT-ATTGAG
520 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGA-TGAG
*** *
5758474 GGATA-GGGGCGGGTATAA-GGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCC
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCC
** * * * * * * **
5758537 CGGCCCCTTCGATCGCCGAAACCCCAATGCCGTCGGTCAGGTTCTTCGGCTATGCTCTGGTGATG
648 CGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATG
* * **
5758602 GTTCCCCGACGAAGAAAAATGCGGCACCAACACATGCCCGAGCCCAGCATGTGCTGCTACAACCC
713 GTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCC
* * * * ** * *
5758667 TCGATCTGGTCCGATCTTAGACTGGGAATAAACTCTATATGCTTAGATTGGGAATGAACTCTGTA
778 TCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTA
* * * * * *
5758732 TGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAACTGGCTAGAGGGGCAGGATGCGAAA
843 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
** * * * * *
5758797 GTTGAGGATCGATCGGGTCCCCCTCTGTGTGCTGCTGATCCTGCTGCCGCAACCCTC-GATCTGA
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAG-TCCGG
5758861 T-TCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA--A--CGGGC
65 TCT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGC
* * * * * * *
5758921 GGACGGACGGGCGTGCACTACGCCGGCCAGAGAGACGGGATGCCCAAGCTGTGGATTGATAAGGT
129 GGGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
* * *
5758986 GGTAGGTGGGTTTAGGCACATTTTCATATTTCTACATGCCAATGCCATTTTTATGGTTTGTAAAT
194 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
* *
5759051 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCATTTTTTATTTTT
259 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
* ** * *
5759116 CATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTAAAATTGTTTT-GGAAGGAGTTTTGGCC
324 CATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATT-TTTTCGGAAGGAGTTTTGGCC
* * * * *
5759180 ACAACCTTGGAAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTGAGCTAAAAACT
388 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACT
* *
5759245 CGAAGTGTACAAGATTTTGCTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAAGGCT
453 CAAAGTGTACAAGATTTTG-TGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCT
** **
5759310 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGCCTTGATG
517 ACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATG
* *
5759375 AGGGATAGGGGACCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAAACCCC
582 AGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC
* * * * * * **
5759440 CCCAGCCCCCCCGATCGCCGAAAACCCAATGCCGCGGGTCAGGTTCTCCGACGATGCTCCGGTGA
646 CCCGGCCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGA
* * *
5759505 TGGTGCCCCCG-CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGGATGTGTTGCCGCAA
711 TGGTG-CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA
* * * * * *
5759569 CCCTCGATCCGGTCTGATCTTAGACTGGGAATGAAATCCGTATGCTTAGACAGGGAATGAACTCA
775 CCCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCC
* * * *
5759634 GTATGCCTAAGTCAACCCCATGAAACGAGCGTGCGGG-GCTTAGCAGGCCAGAGGGGTGGGATGC
840 GTATGCCTAAGTCAA-CCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGC
5759698 GCAA
904 GCAA
** * * * *
5759702 GCCGGGGAT-GG-CGGG-CCCCCTCTGCATGCTGCCAATCCTGCTACCGTAACCCTCGGTCCGG-
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* * * * * *
5759763 CTCCATCTTAGACTAGGAATGAACTCCGTTTACCTAAGCCAACTGACAAAACGAGCAGGC---C-
66 CT-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCG
* * * * * *
5759824 GACGAGCGAGCGGGCACTATGCCGGCCAGAGAGAAGGGATGCGCAA-CCGTGGGTCGATAGGGTG
130 GGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTG
5759888 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
195 GTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATT
* * *
5759953 CATACAGTGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTC
260 CATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTC
* * ** ** * * * *
5760018 ACGATTTTCAAAACTTTTTATGGCTCAGGATTTCTTAAAATTTTTTCAGAAGGATTTTTGGTCCC
325 ATGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
*
5760083 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCG
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCA
* * *
5760148 AAGCGTACAAGATTTTGTGACCATTTTG-AAAAAGTGCCCCCATTTTAGACACTTTAATGGCTAC
455 AAGTGTACAAGATTTTGTGACCA-TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
** * **
5760212 TACCAGCCAACCTGTAAAATCTCAAAATGCTCTTTAAGGGGGTGGTGAGTTCTTGAGGTTTGATG
519 TGGCAGCAAACCTGTAAAATCTC-AAATGCTCTTTAAGGGGGT-GTGAGTTCTCAAGGTTTGAT-
** * *
5760277 GAGGGATAGGGGGGCCAATAT-AGGGATAAGGTACTCA--ACCAACTCGCACATCCTGTGCGCAC
581 GAGGGATA-GGGGGCCAATATAAGGGCCAA-GTAC-CAGCACCCA-TCGCACATCATGTGCGCAC
* * *
5760339 AACCCCCGG-CCCGCCGATCG-CTGGAACCCCAATGCTGCC-GTCAGG-T-T----C--T-C-CC
642 ACCCCCCGGCCCCCCCGATCGTC-GGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCC
* * * * * * * *
5760391 G-CG-TGGTG-CCCGGCAAAGAAAAATGTGTC-CCAGCCAGATTGCCCGAGCCTAGCACGTGCAG
706 GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG-CACA-TGCCCGAGCCCAGCATGTGCTG
* * * ** *
5760452 CCGCAACCCT-GATCCAGTTTCCGATCCTAGACTGGGAATGATGAC-CAATATGCTTAGATTGGG
769 CCGCAACCCTCGGTCC-G-ATCCGATCTTAGACTGGGAATGA--ACTCCGTATGCTTAGACTGGG
* * *
5760515 AATGAACTCCGCATGCCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGG
830 AATGAACTCCGTATG-CCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGG
*
5760580 GGTGGGATGCGCAA
894 GGCGGGATGCGCAA
* * ** * * * * *
5760594 GCCGGGGATCGATCGGGTCCCCCGCTACGTGCTGCCGATCCTACTACCGAAAACCTCAGTCTGGT
1 GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
* *
5760659 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--TG-A-GCGGACGG
66 CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
* * *
5760720 GCGGGC---C-GGCACTACTCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGG
131 GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
* *
5760781 TAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATATTTATGGCTTGTAAATTC
196 TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
5760846 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
261 ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
* * * * *
5760911 TGATTTTTGAAACTTTTTTCGGTTC-GAGATTTTTTCAAATTTTTTCGGAAGGATTTTTGGCCCC
326 TGATTTTTAAAACTTTTTGCGTTTCAG-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCC
* * * * *
5760975 AAACTTGGTAGATGTGATCCTTGTATTTTTGTTGG-AGTGCATAAAACAATTCATCTAAAAAATC
390 AAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTC
* * **
5761039 AAAGTGTACAAGATATTGTGACAATTTGAAAAAAAAGTCCCCATTTCAGACACTTTAATGGCTAC
454 AAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* *
5761104 TGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCCCAAGGTTTGATGAG
519 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAG
* * * *
5761169 GGATAGAGGGCCAATATAAGGGCCAAATACCATCACCCATCACACATCATGT
584 GGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
5761221 ACGCCGGCCA
Statistics
Matches: 25810, Mismatches: 6602, Indels: 3855
0.71 0.18 0.11
Matches are distributed among these distances:
861 5 0.00
862 1 0.00
863 7 0.00
864 344 0.01
865 104 0.00
866 219 0.01
867 70 0.00
868 137 0.01
869 652 0.03
870 138 0.01
871 5 0.00
872 5 0.00
873 107 0.00
874 6 0.00
875 84 0.00
876 36 0.00
877 473 0.02
878 63 0.00
879 451 0.02
880 312 0.01
881 1063 0.04
882 153 0.01
883 231 0.01
884 237 0.01
885 625 0.02
886 834 0.03
887 60 0.00
888 166 0.01
889 236 0.01
890 365 0.01
891 127 0.00
892 890 0.03
893 203 0.01
894 475 0.02
895 572 0.02
896 221 0.01
897 166 0.01
898 485 0.02
899 223 0.01
900 384 0.01
901 779 0.03
902 2865 0.11
903 1184 0.05
904 1513 0.06
905 1571 0.06
906 701 0.03
907 679 0.03
908 144 0.01
909 268 0.01
910 296 0.01
911 209 0.01
912 603 0.02
913 217 0.01
914 290 0.01
915 62 0.00
916 24 0.00
917 45 0.00
918 95 0.00
919 514 0.02
920 142 0.01
921 57 0.00
922 44 0.00
923 21 0.00
924 19 0.00
925 19 0.00
926 80 0.00
927 23 0.00
928 46 0.00
929 56 0.00
930 27 0.00
931 11 0.00
932 15 0.00
933 22 0.00
934 21 0.00
935 22 0.00
936 15 0.00
937 4 0.00
938 36 0.00
939 42 0.00
940 41 0.00
941 36 0.00
942 32 0.00
943 48 0.00
944 46 0.00
945 23 0.00
946 22 0.00
947 10 0.00
948 15 0.00
949 12 0.00
950 41 0.00
951 52 0.00
952 22 0.00
953 28 0.00
954 8 0.00
955 16 0.00
956 7 0.00
957 13 0.00
958 15 0.00
959 16 0.00
960 33 0.00
961 13 0.00
962 13 0.00
963 12 0.00
964 29 0.00
965 14 0.00
966 8 0.00
967 10 0.00
968 4 0.00
969 8 0.00
970 13 0.00
971 20 0.00
972 30 0.00
973 20 0.00
974 31 0.00
975 41 0.00
976 20 0.00
977 37 0.00
978 23 0.00
979 30 0.00
980 38 0.00
981 31 0.00
982 22 0.00
983 19 0.00
984 31 0.00
985 11 0.00
986 10 0.00
987 25 0.00
988 20 0.00
989 22 0.00
990 24 0.00
991 24 0.00
992 27 0.00
993 27 0.00
994 30 0.00
995 23 0.00
996 7 0.00
997 24 0.00
998 19 0.00
999 10 0.00
1000 11 0.00
1001 3 0.00
1002 12 0.00
1003 6 0.00
1004 16 0.00
1005 5 0.00
1006 6 0.00
1007 6 0.00
1008 12 0.00
1009 11 0.00
1010 11 0.00
1011 8 0.00
1012 11 0.00
1013 3 0.00
1014 7 0.00
1015 5 0.00
1016 7 0.00
1017 3 0.00
1018 21 0.00
1019 7 0.00
1020 8 0.00
1021 11 0.00
1022 8 0.00
1023 13 0.00
1024 378 0.01
1025 339 0.01
1026 324 0.01
1027 334 0.01
1028 288 0.01
1029 231 0.01
1030 284 0.01
1031 361 0.01
1032 294 0.01
1033 309 0.01
1034 266 0.01
1035 275 0.01
1036 853 0.03
1037 228 0.01
1038 224 0.01
1039 285 0.01
1040 244 0.01
1041 211 0.01
1042 277 0.01
1043 261 0.01
1044 293 0.01
1045 379 0.01
1046 707 0.03
1047 245 0.01
1048 153 0.01
1049 112 0.00
1050 110 0.00
1051 131 0.01
1052 100 0.00
1053 407 0.02
1054 245 0.01
1055 121 0.00
1056 226 0.01
1057 223 0.01
1058 272 0.01
1059 376 0.01
1060 248 0.01
1061 167 0.01
1062 141 0.01
1063 146 0.01
1064 124 0.00
1065 122 0.00
1066 205 0.01
1067 183 0.01
1068 436 0.02
1069 204 0.01
1070 138 0.01
1071 118 0.00
1072 137 0.01
1073 135 0.01
1074 557 0.02
1075 89 0.00
1076 62 0.00
1077 669 0.03
1078 64 0.00
1079 44 0.00
1080 51 0.00
1081 43 0.00
1082 53 0.00
1083 53 0.00
1084 72 0.00
1085 48 0.00
1086 39 0.00
1087 103 0.00
1088 193 0.01
1089 25 0.00
1090 18 0.00
1091 13 0.00
1092 239 0.01
1093 20 0.00
1094 31 0.00
1095 7 0.00
ACGTcount: A:0.25, C:0.23, G:0.24, T:0.25
Consensus pattern (907 bp):
GCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCAGTCCGGT
CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAGGCGGGCGG
GCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGG
TAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTC
ATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCA
TGATTTTTAAAACTTTTTGCGTTTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCA
AACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAA
AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTG
GCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGG
ATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG
CCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTG
CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCG
GTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGC
CTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAA
Found at i:5737831 original size:881 final size:877
Alignment explanation
Indices: 5735857--5743662 Score: 9393
Period size: 881 Copynumber: 8.8 Consensus size: 877
5735847 TCCGTATGCG
* * *
5735857 TAGACTGGGAATGAACTACGTATGCCTAAGTCAACCCACGAAACGACCGTACGGGCGCTCAGCCA
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* * * * * *
5735922 GCCAGAGGGGCAGGATGCGCAAGCCGGGGATAGGCCGGGTCCCCCTCTACGTACTACCGATCCTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * *
5735987 CTGCCGCAACCCTCAGTCCGATCTC-ATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAAC
131 CTGCCGCAACCCTCA-TTCGGTC-CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * *
5736051 CGAC-AAA-AC-GAGCGGGCGGGCGGGTGGGCACTACGCTGGCCAGAGAGACGGGATGTGCAAGC
194 CGACGAAAGACGGAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* *
5736113 CGTGGCTCGATAGGGCGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
* *
5736178 TTCATGGATTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * * * * * *
5736243 TTCATTTTTTATTTTACGTGATTTTTGAAACTTTTTGAGGTTCGAGATTTTTTAAAATTTTTTTG
388 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCG
* * * *
5736308 AAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTTTTGCCATGCACAAAAAA
453 GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAA
* * *
5736373 ATTCAACTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
518 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
5736438 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGAGGTGTGAGTT
583 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
*
5736503 CTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
648 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
5736568 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAG-T-T-C-TC
713 TGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTC
** *
5736629 --CGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGCT
778 GACGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCT
* * *
5736692 TCCGCAACTCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCTGTAGCT
843 GCCGCAA--C-C---C--GTCTAGTC----ACT-GG-AT--A-TCTGTATCT
* * * * *
5736744 TAGACTGGGAATGAACT-CGTATGCCTAGGTCAACCCATGAAACGAGCTTACGGGCGCTCAGTCA
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* *
5736808 GCCAGA-----GGGATGCGCAAGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCTTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * * * * * *
5736868 ATGTCGTAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAATC
131 CTGCCGCAACCCTCA-TTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* **
5736933 GACG-AA-AC-GAGCGGGCGGACGGGCGGGCACTACGCTGGCCAGAGAGATAGGATGCGCAAGCC
195 GACGAAAGACGGAGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
** * *
5736995 GTGGATCGATAGGGTGGTAGGTGCATTTAGGAACATCTTCATATTTCTGCATGGCAATGCCATTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
5737060 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
324 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * * *
5737125 TCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTGCAGTTTGGGATTTTTTTAAATTTTTTCGG
389 TCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGG
*
5737190 AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
454 AAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAA
* *
5737255 TTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
519 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
* * *
5737320 CACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGACTTC
584 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * *
5737385 TCGAGGCTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGGACATCAT
649 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
5737450 GTGCGCACACCCCCCCCGGCCCCCCCGACCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGT
714 GTGCGCACA--CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGT
* *
5737515 CGATGGTCTGACGATGGTGCCTCGACGAAGAAAAATGCGACACCAGCACATGCCCGA-CCCAGCA
777 CGA----C-GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
5737579 TGTGCTGCCGCAACCC-TC-AGTC-C-GG-T-TC-G-ATCT
837 TGTGCTGCCGCAACCCGTCTAGTCACTGGATATCTGTATCT
* * * * * * *
5737612 TAGACT-GGAATGAACTCCGTATGCCTAAGTCATCCCACTAAACAAGCGTGCAGGTGTTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* * * * * * *
5737676 GCCAGAGGGGTGGGATGCACAAGCCGAGGATCGGCCAGGTCCCCCTCTGCGTGCTACCGATCATG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * * * *
5737741 CTGCCACAACCCTCGATTCGGTCCAATCTTAGACTGGAAATGAACTCTGTATGCCTAAGCAAACA
131 CTGCCGCAACCCTC-ATTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * * *
5737806 GATGAAACGAGCGGA-CAGACGGGCGGGCGGGCACTACGCCGACCAGAGAGACGGGATGTGCAAG
195 GACGAAA-GA-CGGAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
*
5737870 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCAATGCCAT
257 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
5737935 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
322 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * * * * *
5738000 ATTCATTTTTTATTTTACGTGATTTTTGAAACTTTTTGAGGTTCGAGATTTTTTAAAATTTTTTT
387 ACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTC
* * * *
5738065 GAAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTATTTTTTTTGCCATGCACAAAAA
452 GGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAA
* *
5738130 AATTCAACTAAAAACTCGAAGTGTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
517 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * *
5738195 AACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGGAGGTGTGAGT
582 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
*
5738260 TCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
647 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
5738325 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCGGTCAAG-T-T-C-T
712 ATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGT
* *
5738386 C--CGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCTGAGCCCAGCATGTGC
777 CGACGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGC
* * *
5738449 TTCCGCAACTCTCGGTCTGGTCTAATCTTAGACTGGGAATGAACTCTGTAGCT
842 TGCCGCAA--C-C---C--GTCTAGTC----ACT-GG-AT--A-TCTGTATCT
* * * * *
5738502 TAGACTGGGAATGAACT-CGTATGCCTAGGTCAACCCATGAAACGAGCTTACGGGCGCTCAGTCA
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* *
5738566 GCCAGA-----GGGATACGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCTTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * * * * * *
5738626 ATGTCGTAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
131 CTGCCGCAACCCTCA-TTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* **
5738691 GACG-AA-AC-GAGCGGGCGGACGGGCGGGCACTACGCTGGCCAGAGAGATAGGATGCGCAAGCC
195 GACGAAAGACGGAGCGGGCGG-CGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
** * *
5738753 GTGGATCGATAGGGTGGTAGGTGCATTTAGGAACATCTTCATATTTCTGCATGGCAATGCCATTT
259 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
* *
5738818 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGCCTAGAC-AG
324 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA-
* *
5738882 CTCGTTTTCTATTTTTCAAGATTTTTGAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTC
388 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTTTC
* * * * *
5738946 AGAAGAAGTTTTT-GCCCCAAACTTGGTAGACATGATCCTCGTATTTTTCTTGGCATGCACAAAA
452 GGAAGGA-TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAA
* * *
5739010 CAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGCGACCATTTAAAAAAAGTGTCCCCATTTC
516 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
5739075 AGACACTTTAATGGCTACTGGCATCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
581 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
5739140 TTCTCGAGGTTTGATGAGGGATAGAGGGCCAATCTAAGGGCCAAGTACCAGCACCCATTGCACAT
646 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * * * * * *
5739205 CATGTGCACACACCCCCCCGGCCCACCCGATTGTCGAAACACCAATGTCGTCGGTCAGGTTCT-C
711 CATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * * * *
5739269 --CG--G-TGATGGTACCCCGACGAAGAAAAATGCAGCCCCAGCACATGCCCGAGCCCAGCATCT
775 GTCGACGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGT
* ** * * * *
5739329 ACTTTCGCGACCCTCAGTTCGGTCTGATCTTAGACTGGGAATGAACTCCTATGCT
840 GCTGCCGC-AACC-C-G-TC--T-AG-TC----ACT-GG-AT-ATCT-GTAT-CT
** * *
5739384 TAGACTACGAATGAACTCCATATGCCTAAGTCAACCTACGAAACGAGCGTACGGGCGCTCAGCCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
** * * * *
5739449 GATAGAGGGGCAGGATGCGTAAGCCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* * *
5739514 CTGCCACAACCCTCAGTCAGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACC
131 CTGCCGCAACCCTCATTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * **
5739579 GACGAAATGAGCGG-GCGGGCGGGCGCGTGGGCACTACGCCGACCAGAGAGATAGGATGCGCAAG
195 GACGAAA-GA-CGGAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAG
* * *
5739643 CCGTGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCGTGCCAATGCCAT
257 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCAT
* *
5739708 TTTTATGGGTTGTAAATTCATAAAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC-
322 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * *
5739772 AGCTCGTTTTCTATTTTTCTTGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTT
387 A-CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTT
* * * *
5739837 TGGAAGGAGTTTTT-GCCGCAAACTTGGTATACGTGATCCTTGTATTTTTCTTGGCATGCA-AAA
451 CGGAAGGA-TTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
*
5739900 AACAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATT
515 AA-AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5739965 TCAGACACTTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCGCTTTAAGGGGGGGTG
579 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * *
5740030 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCCAAGTACTAGCACCCATCGCAC
644 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
5740095 ATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
709 ATCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCT
* * * *
5740160 CCG--G-CGATC-CTGGTGCCCCGACGAAGAAAAATACGGCACC-GACACATTCTCGAG-CCAGC
773 CCGTCGACGA-CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAG-CACATGCCCGAGCCCAGC
* * * **
5740219 ATGTGCTGCCGGAACCC-TC-GGTC-C---A-GTC-CCATCT
836 ATGTGCTGCCGCAACCCGTCTAGTCACTGGATATCTGTATCT
** * * *
5740253 TAGAGAGGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAACAAGCGTACGGGCGCTCAGTCG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
** * * * *
5740318 GCCAGAGACGCGGGATGCGCAAGCCGAGGATC-GACTGGGTCCCCCTTTGCGTGCTGCTGATCCT
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATCCT
** * * * * * * *
5740382 ATTGCTGCAACCCTCGTTCCTGTCTGATCTTGGATTGGGAATGAACTCCGTATCCCTAAGCCAAC
130 GCTGCCGCAACCCTCATT-CGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * *
5740447 CGACGAAACGA-GTGGGCGGGCGGGCGGGCAGGCACTACGTCGACCAGAGAGACGGGATGCGCAA
194 CGACGAAA-GACG-GAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
5740511 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCA
256 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
5740576 TTTTTATGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
321 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* *
5740641 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTATTTGCGGTTC-ATGATTTTTTAAAATTTTT
386 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTT
* * *
5740705 TCGAAAGG-TGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAA
450 TCGGAAGGAT-TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAA
5740769 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
514 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5740834 TCAGACACTTTCATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGAGGTGTG
579 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
*
5740899 AGTTCTCGAGGTTTGATGAGGGATA-AGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
644 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* *
5740963 ATCATGTGCGCACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTC
709 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * * * * *
5741028 CGGCTATGCTCTGGCGATGGTTCCTCGATGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCA
774 C-G-T-CG-AC-GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
* *
5741093 GCATGTGCTGCTGCAACCCTCGGTCTGGTCCGATCTTAGAATGGGAATAAACTCTGTATGCT
834 GCATGTGCTGCCGCAA-CC-C-GTCTAGT-C-A-C------T-GG-AT--A-TCTGTAT-CT
* **
5741155 TAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAAACG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* * * * * * * *
5741220 GCTAGAGGGGCAGGATGTGAAAGTCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCTGATCCTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* *
5741285 CTGCCGCAACCCTCGA-TCTGATTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
131 CTGCCGCAACCCTC-ATTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
** * * * *
5741349 TAACGAAACGAACGG-GCAGACGGGCGGGCGTGCACTACGCCGGCCAGAGAGACGGGATGCCCAA
194 CGACGAAA-G-ACGGAGCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
5741413 GCCGTGGATTGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
256 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
5741478 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
321 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
5741543 GACTCATTTTCTATTTTTCACGATTTTCGAAACTTTTTGTGGTTCGGGATTTTTTAAAATTGTTT
386 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATT-TTT
* * * * * *
5741608 T-GGAAGGAGTTTTAGCCACAACCTTGGAAGACGTGATCCTTTTATTTTTTTTGGCATGCACAAA
450 TCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
5741672 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
515 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
5741737 CAGATACTTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
580 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * *
5741802 GTTCTTGAGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACCCATCGCACA
645 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * *
5741867 TCACGTGCGCAAACCCCCCCGGCCCCCCCGATCACCGGAAACCTAATGCCGCCAGTCAGGTTCTC
710 TCATGTGCGCACA-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* ** * *
5741932 CGACGATGCTCCGGTGATGGTGCCCCCG-CGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCC
774 CGTCGA-----CGACGATGGTG-CCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
** * * *
5741996 AGCACATGCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCT
833 AGCATGTGCTGCCGCAA-CC-CG-T-C--T-AG-TC----ACT-GG-AT--A-TCTGTAT-CT
* * * * *
5742059 TAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTTAGCAG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* * * * * * *
5742124 GCCAGAGGGGTGGGATACGCAAGTCGGGGATTGGCCGGGTCCCCCTCTGCATGCTGCCAATCCTG
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
* ** * * * *
5742189 CTACCATAACCCTCGA-TCTGGTCCCATCTTAGACTAGGAATGCACTCCGTATACCTAAGCCAAC
131 CTGCCGCAACCCTC-ATTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAAC
* * * * * * * *
5742253 CGACAAAAAGA-GCAGGCCGACAAGCGAGCGGGCACTATGCCGGCCAGAGAGATGGGATGCGCAA
194 CGAC-GAAAGACGGA-GCGGGC-GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
5742317 GCCGTGGGTTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
256 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
* *
5742382 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGAT
321 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** * *
5742447 GACTCGTTTTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTC-AGGATTTCTTAAACTTTTT
386 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGA-GATTTTTTAAAATTTTT
* * * *
5742511 TCAGAAGGAGTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
450 TCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAA
* *
5742576 AAAATTCAGC-AACAAACTCGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATT
515 AAAATTCAGCTAA-AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
5742640 TTAGACACTTTAATGGCTACTAGCAGCAAACCTGTGAAATCTCAAATGCTCTTTAAGGGGGTGTG
579 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* ** * * *
5742705 AGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGATAAGTACTAGCACCAATCACAC
644 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* **
5742770 ATCATGTGCGCACA-CCCCCGG-CCCGCCGATCGCCGGAACCCCAATGCCGCCAATCAGGTTCT-
709 ATCATGTGCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * *
5742832 C--C--CG-CGATGGTGCCCTGACAAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATG
774 CGTCGACGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATG
* * * **
5742892 TGCAGTCGCAACCCTTGATCCAATTCGATCTTAGACTGGGAATGAACTCAATATGCT
839 TGCTGCCGCAACCC--G-T-C---TAG-TC----ACT-GG-AT--A-TCTGTAT-CT
* * * * * * *
5742949 TAGATTAGGAATGAACTCCGCATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCAG
1 TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
* * * * * *
5743014 GCTAGAGGGGTGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCGCTACGTGCTGCCGATCCTA
66 GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
** * * * *
5743079 CTATCGAAACCCTCAGTCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACC
131 CTGCCGCAACCCTCATTC-GGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
* * * *
5743144 GACGAAATGA-GCAGAC--G-GGCGGGTGGGCACTACTCCGGCCAGAGAGACGGGATGCACAAGC
195 GACGAAA-GACGGAG-CGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * *
5743205 CATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATT
258 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
5743270 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACGA
323 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
5743335 CTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTTCGGTTCGAGATTTTTTCAAATTTTTTCG
388 CTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCG
* *
5743400 GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG-AGTGCACAAAAC
453 GAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCA-TGCACAAAAA
* * *
5743464 AATTCATCTAAAAACTCGAAGTGTACAAGATATTGTGACAATTTGAAAAAAAG-GTCCCCATTTC
517 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTC
5743528 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
581 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
5743593 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAATTACCATCACCCATCACACAT
646 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
5743658 CATGT
711 CATGT
5743663 ACGCCGGCCA
Statistics
Matches: 6042, Mismatches: 694, Indels: 367
0.85 0.10 0.05
Matches are distributed among these distances:
864 44 0.01
865 20 0.00
867 63 0.01
868 109 0.02
869 585 0.10
870 12 0.00
871 3 0.00
872 3 0.00
873 100 0.02
874 10 0.00
875 83 0.01
876 21 0.00
877 473 0.08
878 10 0.00
879 1 0.00
880 15 0.00
881 1044 0.17
882 133 0.02
883 93 0.02
884 11 0.00
885 104 0.02
886 495 0.08
887 31 0.01
888 108 0.02
889 16 0.00
890 316 0.05
891 19 0.00
892 511 0.08
893 29 0.00
894 57 0.01
895 36 0.01
896 1 0.00
898 1 0.00
900 3 0.00
901 40 0.01
902 604 0.10
903 65 0.01
904 757 0.13
905 9 0.00
907 1 0.00
908 2 0.00
909 1 0.00
910 1 0.00
911 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.25
Consensus pattern (877 bp):
TAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCG
GCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTG
CTGCCGCAACCCTCATTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG
ACGAAAGACGGAGCGGGCGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCATGATTTTTGAAACTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAA
GGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGTCGAC
GACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCC
GCAACCCGTCTAGTCACTGGATATCTGTATCT
Found at i:5739395 original size:25 final size:26
Alignment explanation
Indices: 5739357--5739408 Score: 79
Period size: 25 Copynumber: 2.0 Consensus size: 26
5739347 TCGGTCTGAT
**
5739357 CTTAGACTGGGAATGAACTCC-TATG
1 CTTAGACTACGAATGAACTCCATATG
5739382 CTTAGACTACGAATGAACTCCATATG
1 CTTAGACTACGAATGAACTCCATATG
5739408 C
1 C
5739409 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 19 0.79
26 5 0.21
ACGTcount: A:0.31, C:0.23, G:0.19, T:0.27
Consensus pattern (26 bp):
CTTAGACTACGAATGAACTCCATATG
Found at i:5741178 original size:26 final size:26
Alignment explanation
Indices: 5741127--5741179 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
5741117 CTGGTCCGAT
**
5741127 CTTAGAATGGGAATAAACTCTGTATG
1 CTTAGAATGGGAATAAACTCCATATG
* *
5741153 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGAATGGGAATAAACTCCATATG
5741179 C
1 C
5741180 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.17, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATAAACTCCATATG
Found at i:5742060 original size:26 final size:26
Alignment explanation
Indices: 5742031--5742083 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5742021 CCGGTCCGAT
5742031 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5742057 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5742083 C
1 C
5742084 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5742731 original size:904 final size:899
Alignment explanation
Indices: 5740259--5743662 Score: 4713
Period size: 904 Copynumber: 3.8 Consensus size: 899
5740249 ATCTTAGAGA
* *
5740259 GGGAATGAACTCCGTATGCCTAGGTCAACCCACGAAACAAGCGTACGGGCGCTCAGTC-GGCCAG
1 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAG-CAGGCCAG
** * * * * * *
5740323 AGACGCGGGATGCGCAAGCCGAGGATCGACTGGGTCCCCCTTTGCGTGCTGCTGATCCTATTGCT
65 AGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTACC
* * * * * *
5740388 GCAACCCTCGTTCCT-GTCTGATCTTGGATTGGGAATGAACTCCGTATCCCTAAGCCAACCGACG
130 ACAACCCTCGAT-CTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
** * * * *
5740452 AAACGAGTGGGCGGGCGGGCGGGCAGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGTG
194 AAACGAGCAGGC-GACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
* *
5740517 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTTATATTTCTGCATGCCAATGCCATTTTTA
258 GATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
*
5740582 TGGCTTGTAAATTCATACAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
323 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * * * *
5740647 TTTTCTATTTTTCACGATTTTTGAAACTATTTGCGGTTCATGATTTTTTAAAATTTTTTCGAAAG
388 TTTTCTATTTTTCACGATTTTCGAAACTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTCGGAAG
* * *
5740712 GTGTTTTAGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTC
453 GAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
5740777 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
518 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* * *
5740842 TTTCATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGATCTTTAAGGAGGTGTGAGTTCTCG
583 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* *
5740907 AGGTTTGATGAGGGATA-AGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTG
648 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTG
* * *
5740971 CGC-ACACCCCCCTGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGCTAT
713 CGCAAC-CCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCC-GC-AT
* * * * * * *
5741035 GCTCTGGCGATGGTTCCTCGATGAAGAAAAATGCGGCACCAGCACATGCTCGAGCCCAGCATGTG
775 GCTCCGG-GATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTG
* * * * * * * *
5741100 CTGCTGCAACCCTCGGTCTGGTCCGATCTTAGAATGGGAATAAACTCTGTATGCTTAGACT
839 CTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCAGTATGCTTAGATT
* * *
5741161 GGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCA-AACGGCTAG
1 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCA-GGCCAG
* * * * * * * *
5741225 AGGGGCAGGATGTGAAAGTCGAGGATCGATCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCC
65 AGGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTACC
* * * **
5741290 GCAACCCTCGATCTGATTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTAACGA
130 ACAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGA
* * * *
5741355 AACGAACGGGCAGACGGGCGGGCGTGCACTACGCCGGCCAGAGAGACGGGATGCCCAAGCCGTGG
195 AACGAGCAGGC-GACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
5741420 ATTGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
259 ATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
*
5741485 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCAT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
*
5741550 TTTCTATTTTTCACGATTTTCGAAACTTTTTGTGGTTCGGGATTTTTTAAAATTGTTTT-GGAAG
389 TTTCTATTTTTCACGATTTTCGAAACTTTTTGTGGTTCAGGATTTTTTAAAATT-TTTTCGGAAG
* * * * *
5741614 GAGTTTTAGCCACAACCTTGGAAGACGTGATCCTTTTATTTTTTTTGGCATGCACAAAAAAATTC
453 GAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
5741679 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGATAC
518 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
5741744 TTTAAAGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTG
583 TTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCG
* * * *
5741809 AGCTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGAACCCATCGCACATCACGTG
648 AGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTG
* * *
5741874 CGCAAACCCCCCCGGCCCCCCCGATCACCGGAAACCTAATGCCGCCAGTCAGGTTCTCCGACGAT
713 CGC-AACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCG-C-AT
**
5741939 GCTCCGGTGATGGTGCCCCCG-CGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCACAT
775 GCTCCGG-GATGGTG-CCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGT
*
5742003 GCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGATT
838 GCTACCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCAGTATGCTTAGATT
* * *
5742065 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCACTTAGCAGGCCAGA
1 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCAGGCCAGA
* * * * * * * * *
5742130 GGGGTGGGATACGCAAGTCGGGGATTGGCCGGGTCCCCCTCTGCATGCTGCCAATCCTGCTACCA
66 GGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTACCA
* * * * * *
5742195 TAACCCTCGATCTGGTCCCATCTTAGACTAGGAATGCACTCCGTATACCTAAGCCAACCGACAAA
131 CAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
* ** * * * *
5742260 AAGAGCAGGCCGACAAGCGAGCGGGCACTATGCCGGCCAGAGAGATGGGATGCGCAAGCCGTGGG
196 ACGAGCAGG-CGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
* *
5742325 TTGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
260 TCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATG
* *
5742390 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGATGACTCGTT
325 GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
* * * * *
5742455 TTCTATTTTTCATGATTTTCGAAACTTTTTATGGTTCAGGATTTCTTAAACTTTTTTCAGAAGGA
390 TTCTATTTTTCACGATTTTCGAAACTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGA
* *
5742520 GTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
455 GTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
* * *
5742585 C-AACAAACTCGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTTAGACACT
520 CTAA-AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * *
5742649 TTAATGGCTACTAGCAGCAAACCTGTGAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGA
584 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
** * *
5742714 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGATAAGTACTAGCACCAATCACACATCATGTGC
649 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGC
* * *
5742779 GC-ACACCCCCGG-CCCGCCGATCGCCGGAACCCCAATGCCGCCAATCAGGTTCTCC-C--G---
714 GCAACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGCATGCTC
* * *
5742836 C--GATGGTGCCCTGACAAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGC-AGT
779 CGGGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTA-C
* ** * *
5742898 CGCAACCCTTGATCCAATTCGATCTTAGACTGGGAATGAACTCAATATGCTTAGATT
843 CGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCAGTATGCTTAGATT
* * * * * *
5742955 AGGAATGAACTCCGCATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGTGCTCAGCAGGCTAGA
1 GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCAGGCCAGA
* * * * * *
5743020 GGGGTGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCGCTACGTGCTGCCGATCCTACTATCG
66 GGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTA-CC
* *
5743085 A-AACCCTC-AGTCTGGTCTGATCTTAGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACG
130 ACAACCCTCGA-TCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG
* * * * *
5743148 AAATGAGCA---GACGGGCGGGTGGGCACTACTCCGGCCAGAGAGACGGGATGCACAAGCCATGG
194 AAACGAGCAGGCGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
5743210 ATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTAT
259 ATCGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTAT
*
5743275 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAGGGCAAGACGACTCGT
324 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* ** *
5743340 TTTCTATTTTTCATGATTTTTAAAACTTTTT-TCGGTTC-GAGATTTTTTCAAATTTTTTCGGAA
389 TTTCTATTTTTCACGATTTTCGAAACTTTTTGT-GGTTCAG-GATTTTTTAAAATTTTTTCGGAA
* * *
5743403 GGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG-AGTGCACAAAACAAT
452 GGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA-TGCACAAAAAAAT
* * *
5743467 TCATCTAAAAACTCGAAGTGTACAAGATATTGTGACAATTTGAAAAAAAG-GTCCCCATTTCAGA
516 TCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGA
5743531 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
580 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
5743596 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAATTACCATCACCCATCACACATCAT
645 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCAT
5743661 GT
710 GT
5743663 ACGCCGGCCA
Statistics
Matches: 2237, Mismatches: 243, Indels: 60
0.88 0.10 0.02
Matches are distributed among these distances:
885 3 0.00
886 449 0.20
887 9 0.00
889 6 0.00
890 271 0.12
891 2 0.00
893 1 0.00
896 1 0.00
899 1 0.00
901 40 0.02
902 605 0.27
903 58 0.03
904 783 0.35
905 8 0.00
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCAGGCCAGA
GGGGCGGGATGCGCAAGCCGAGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTACTACCA
CAACCCTCGATCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAA
ACGAGCAGGCGACGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGAT
CGATAAGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGG
CTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTT
TCTATTTTTCACGATTTTCGAAACTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTCGGAAGGAG
TTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGC
TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTT
AATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGG
TTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGC
AACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGCATGCTCCG
GGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCAAGCCCAGCATGTGCTACCGC
AACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCAGTATGCTTAGATT
Found at i:5744105 original size:490 final size:488
Alignment explanation
Indices: 5743178--5744156 Score: 1586
Period size: 490 Copynumber: 2.0 Consensus size: 488
5743168 GGGCACTACT
5743178 CCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATC
1 CCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATC
5743243 TTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
66 TTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
5743308 TTCACGTGAAGTTTCAGGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTTC
131 TTCACGTGAAGTTTCAGGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
** * **
5743373 GGTTCGAGATTTTTTCAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
196 GGTTCGAGATTTTTGAAAATTTTTTCGAAACCATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* *
5743438 TGTATTTTTGTTGGAGTGCACAAAACAATTCATCTAAAAACTCGAAGTGTACAAGATATTGTGAC
261 TGTATTTTTGTTGGAGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGAC
*
5743503 AATTTGAAAAAAAGGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
326 AATTTGAAAAAAAGGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCT
*
5743568 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
391 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGG
* * *
5743633 CCAATTACCATCACCCATCACACATCATGTACG
456 CAAAGTACCAGCACCCATCACACATCATGTACG
* * * *
5743666 CCGGCCAGAGAGACGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATC
1 CCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATC
***
5743731 TTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
66 TTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * *
5743796 TTCACGTTAAGTTTCATGGCCAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
131 TTCACGTGAAGTTTCAGGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
* * * *
5743861 GGTTTGGGATTTTTGAAAATTTTTTCAGAAATCCTTTTTTGGCCCCAAACTTGGTGGA-GATGAT
196 GGTTCGAGATTTTTGAAAATTTTTTC-GAAA-CCATTTTTGGCCCCAAACTTGGTAGACG-TGAT
* *
5743925 CCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTG
258 CCTTGTATTTTTGTTGG-AGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTG
*
5743989 TGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAA
322 TGACAATTTGAAAAAAAG-GTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAA
*
5744053 AATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
386 AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
*
5744118 AAAGGCAAAGTACCAGCACCCATCGCACATCATGTACG
451 AAAGGCAAAGTACCAGCACCCATCACACATCATGTACG
5744156 C
1 C
5744157 ACACCCCCCG
Statistics
Matches: 452, Mismatches: 34, Indels: 8
0.91 0.07 0.02
Matches are distributed among these distances:
488 204 0.45
489 11 0.02
490 236 0.52
491 1 0.00
ACGTcount: A:0.27, C:0.19, G:0.22, T:0.32
Consensus pattern (488 bp):
CCGGCCAGAGAGACGGGATGCACAAGCCATGGATCGATAAGGTGGTAGGTGGGTTTAGGCACATC
TTCATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
TTCACGTGAAGTTTCAGGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTTAC
GGTTCGAGATTTTTGAAAATTTTTTCGAAACCATTTTTGGCCCCAAACTTGGTAGACGTGATCCT
TGTATTTTTGTTGGAGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGAC
AATTTGAAAAAAAGGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCT
CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGG
CAAAGTACCAGCACCCATCACACATCATGTACG
Found at i:5744339 original size:26 final size:26
Alignment explanation
Indices: 5744310--5744362 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5744300 CCAGTCCGAT
5744310 CTTAGAATGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
5744336 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
5744362 C
1 C
5744363 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:5745487 original size:489 final size:488
Alignment explanation
Indices: 5744571--5745544 Score: 1470
Period size: 489 Copynumber: 2.0 Consensus size: 488
5744561 GGGCACAACG
* *
5744571 CCGGCCAGAGAGATGGGATGCGCAAGACGTGCATCGATAGGGTGATAGGTGGGTTTAGGCACATC
1 CCGGCCAAAGAGACGGGATGCGCAAGACGTGCATCGATAGGGTGATAGGTGGGTTTAGGCACATC
* * *
5744636 TTCATAGTTCTACATGCCAATGCCATTTTTATGGTTTGTTAGTTCATACAATAGTCCCTTAAGCC
66 TTCATAGTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATAGTCCCTTAAGCC
* * **
5744701 TTCACGTGAAGTTTCATGGCAAGACGGCTCATTTTTTATTTTTCATTATTTTTGAAACTTTTTAC
131 TTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
* **
5744766 GGTTCGAGATTTTTTAAAATTTCTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
196 GGTTCGAGATTTTTGAAAATTTCTTCGAAACCAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
* *
5744831 TGTAGTTTTGTTGGAGTGCACAAAACAATTCATCTAAAAACTCGAAGTGTACAAGATATTGTGAC
261 TGTAGTTTTGTTGGAGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGAC
* *
5744896 AATTTGAAAAAAAAGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
326 AATTTGAAAAAAAAGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCT
* * *
5744961 CAAATTCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-GGGGCCAATATAAGGG
391 CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGG
*
5745025 CCAAA-TACCATCACCCATCACACATCATGTACC
456 -CAAAGTACCAGCACCCATCACACATCATGTACC
* * * * *
5745058 CCGGCCAAAGAGACGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATC
1 CCGGCCAAAGAGACGGGATGCGCAAGACGTGCATCGATAGGGTGATAGGTGGGTTTAGGCACATC
* *** * *
5745123 TTCATATTTCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCC
66 TTCATAGTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATAGTCCCTTAAGCC
* *
5745188 TTCACGTTAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
131 TTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
* * * **
5745253 GGTTTGGGATTTTTGAAAATTTTTTCAGAAATCCTTTTTTGGCCCCAAACTTGGTAGA-GATGAT
196 GGTTCGAGATTTTTGAAAATTTCTTC-GAAA-CCAGTTTTGGCCCCAAACTTGGTAGACG-TGAT
* * *
5745317 CCTTGTATTTTTGTTGGCA-TGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTG
258 CCTTGTAGTTTTGTTGG-AGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTG
* *
5745381 TGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAA
322 TGACAATTTGAAAAAAAAGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAA
*
5745446 ATCTTAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
387 ATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATA
*
5745511 AAGGCAAAGTACCAGCACCCATCGCACATCATGT
452 AAGGCAAAGTACCAGCACCCATCACACATCATGT
5745545 GCGCACACCC
Statistics
Matches: 436, Mismatches: 45, Indels: 9
0.89 0.09 0.02
Matches are distributed among these distances:
487 195 0.45
488 5 0.01
489 197 0.45
490 39 0.09
ACGTcount: A:0.28, C:0.18, G:0.21, T:0.32
Consensus pattern (488 bp):
CCGGCCAAAGAGACGGGATGCGCAAGACGTGCATCGATAGGGTGATAGGTGGGTTTAGGCACATC
TTCATAGTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATAGTCCCTTAAGCC
TTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
GGTTCGAGATTTTTGAAAATTTCTTCGAAACCAGTTTTGGCCCCAAACTTGGTAGACGTGATCCT
TGTAGTTTTGTTGGAGTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATATTGTGAC
AATTTGAAAAAAAAGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCT
CAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGG
CAAAGTACCAGCACCCATCACACATCATGTACC
Found at i:5745738 original size:26 final size:26
Alignment explanation
Indices: 5745702--5745754 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5745692 CCAGTCCGAT
*
5745702 CTTAGAATGGGAATGAACTTCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
*
5745728 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGAATGGGAATGAACTCCGTATG
5745754 C
1 C
5745755 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGAATGGGAATGAACTCCGTATG
Found at i:5746519 original size:11 final size:11
Alignment explanation
Indices: 5746503--5746533 Score: 53
Period size: 11 Copynumber: 2.8 Consensus size: 11
5746493 CGGTCAGGTT
5746503 CTCCGGCGATG
1 CTCCGGCGATG
5746514 CTCCGGCGATG
1 CTCCGGCGATG
*
5746525 CTCTGGCGA
1 CTCCGGCGA
5746534 CGATGCCCCG
Statistics
Matches: 19, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
11 19 1.00
ACGTcount: A:0.10, C:0.35, G:0.35, T:0.19
Consensus pattern (11 bp):
CTCCGGCGATG
Found at i:5746652 original size:26 final size:26
Alignment explanation
Indices: 5746616--5746668 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
5746606 CTGATTCGAT
5746616 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5746642 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5746668 C
1 C
5746669 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5747176 original size:905 final size:888
Alignment explanation
Indices: 5745066--5748410 Score: 4492
Period size: 905 Copynumber: 3.7 Consensus size: 888
5745056 CCCCGGCCAA
* *
5745066 AGAGACGGGATGCGCAAGCCTTGGATCGATAGGGTGGTAGGTTGGTTTAGGCACATCTTCATATT
1 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * *
5745131 TCTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAATGGTCCCTTAAGCCTTCACGTT
66 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* *
5745196 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTTGGG
131 AAGTTTCATGGCAAGACGACTAGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
* ***
5745261 ATTTTTGAAAATTTTTTCAGAAATCCTTTTTTGGCCCCAAACTTGGTAGA-GATGATCCTTGTAT
196 ATTTTTTAAAATTTTTTC-GAAA-GGATTTTT-GCCCCAAACTTGGTAGACG-TGATCCTTGTAT
* *
5745325 TTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
257 TTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTT
* *
5745390 GAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTAGCAGCAAACCTATAAAATCTTAAAT
322 GAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAAT
* * *
5745455 GCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAAGGCAAAG
387 GCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAG
* *
5745520 TACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCCAATCACCGGAACCCCAA
452 TACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAA
* * * ** *
5745584 TGCCGTCGGTCAGGTTCTCCAGTGATGCTCCGGCGATGGTGACCCGACGAAGAAAAATACGGCAC
517 TGCCGCCAGTCAGGTTCTCCAGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGACAC
* * * * *
5745649 CAGCACATGCCCGAGCCCAGCATGCGCTG-CAGCAAAACCT-GATCCAGTCCGATCTTAGAATGG
582 CAGCACATGCCCGAGCCCAGCATGTGCTGCCA-C-AACCCTCGGTCGA-TCCGATCTTAGACTGG
* * *
5745712 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCCCAAAACAAG
644 GAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAG
* * ** *
5745777 TGTGCGGGTGCCCAGTTGGCCAGAGGGGCGGGATGCGTAAGTCGGGG-CTCGATCGGGTTCCCCT
709 CGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGAC-CGATCGGGTTCCCCT
* * *
5745841 CTGCGTGTTGTCGATCCTACTGCTGCAACCCTTGGTTCGATCTGATATTAGACTAGGAATGAACT
773 CTGC-TG-TG-CGATCCTAC-G-TGCAACCCTTGGTCCGGTCTGATCTTAGACTAGGAATGAACT
* *
5745906 CCGTATGCCTAAGCCAACCGACGAAACAAGCGGGCGAGCGGGCGGGCGGG-CATGACGTCGGCCA
833 CCGTATGCCTAAGCCAACCGATG--A-AA-----CGAGCGGGCGGGCGGGAC-T-ACGTCGACCA
5745970 G
888 G
* * *
5745971 AGAGACGGGATGCGCAAGCCGTGCATCGATAGGGTGATAGGTGGGTTTAGGCACATCTTCATAGT
1 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * * *
5746036 TCTACGTGCCAATGCCATTTTTATGGTTTGTTACTTCATACAAAGGTCCCTTAAGCCTTCACGCG
66 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * *
5746101 AAGTTTCATGGCAAGACGGCTCA-TTTTTTATTTTTCATGATTTTTGAAACTTTTTACGGTTTGA
131 AAGTTTCATGGCAAGACGACT-AGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGG
* * *
5746165 GATTTTTTAAAATTTCTTCGAAAGGAGTTTTGACCCCAAACTTGGTAGACGTGATTCTTGTATTT
195 GATTTTTTAAAATTTTTTCGAAAGGATTTTTG-CCCCAAACTTGGTAGACGTGATCCTTGTATTT
* * *
5746230 TTTTGGGCATGCACAAAAAAGTTGAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
259 TTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGA
* * * *
5746295 AAAAATTGTCTTCAATTT-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATG
324 AAAAAATGTC-CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATG
** ** *
5746359 CTCTTTAAGGGGGCATGAGTTCTTGAGGTTTGATGAGGGATAAGGGGCCAATATAAGGGCCAAGT
388 CTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGT
** * * *
5746424 ACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCTAGCACCCCCGATCGTCGGAACCCTAAT
453 ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAAT
* * * *
5746488 GCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGCTCTGGCGACGATGCCCCGACAAAGAAA
518 GCCGCCAGTCAGGTTCTCCAGTGATGCTCCGGCGA-----T---G--G-TGCCCCGACGAAGAAA
*
5746553 AATGTGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCTGATTCGATCT
572 AATGTGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTC-GATCCGATCT
*
5746618 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
636 TAGACTGGGAATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
*
5746683 GAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGAATGCGCAAGTCGGGGACCGATCGGG
701 GAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGACCGATCGGG
* *
5746748 TTCCCCTCTGCATGCTGCCGATCCTACGGTTGCAACCCTCGGTCCGGTCTGATCTTAGACTGGGA
766 TTCCCCTCTGC-TG-TG-CGATCCTAC-G-TGCAACCCTTGGTCCGGTCTGATCTTAGACTAGGA
* *
5746813 ATGAACTTCGTATGCCTAAGCCAACTGATGAAACGAGCGGGCGGGCGGGACTACGTCGACCAG
826 ATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGACTACGTCGACCAG
*
5746876 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATT
1 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* *
5746941 TCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACGTG
66 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * **
5747006 AAGTTTCATGGCAAAACCACTAGTTTTCTGTTTTTCATGATTTTCAAAACTTTTTACGGTTCGGG
131 AAGTTTCATGGCAAGACGACTAGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
* * *
5747071 ATTTTTTAAATTTTTTTTGAAAGGCATTTTTGGCCCAAACTTGGTAGACGTGATCCTTGTATTTT
196 ATTTTTTAAAATTTTTTCGAAAGG-ATTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* **
5747136 TTTTGGCTTGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTCTCCATTTGAA
260 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
5747201 AAAAATGTCCCCATTTCAGACACTTTAATGGCTAGTGGCAGCAAACCTGTAAAATCTCAAATGCT
325 AAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCT
* *
5747266 CTTTTAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCATGTAC
390 CTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* ** * *
5747331 CAGCACCCATCGCACATCATGTGTGCACACCCCCCCCGTTCCCCCCGATCGCCTGAACCCAAATG
455 CAGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATG
* *
5747396 CCGCCAGTCAGGTTCTCCGGTGATGC-CCTGGCGATGGTGCCCTGACGAAGAAAAATGT-AGCAC
519 CCGCCAGTCAGGTTCTCCAGTGATGCTCC-GGCGATGGTGCCCCGACGAAGAAAAATGTGA-CAC
* * *
5747459 CAGGACATGCCCGAGCCCAGCATGTGCTGTCGA-AACCCTCGGTCCGGTCCGATCTTAGACTGGG
582 CAGCACATGCCCGAGCCCAGCATGTGCTG-CCACAACCCTCGGT-CGATCCGATCTTAGACTGGG
* *
5747523 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTGAACCCACGAAGCGAGC
645 AATGAACTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC
* * * * * * *
5747588 ATGC-GGTCACTCAGCCTGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTC
710 GTGCGGGT-GCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGACCGATCGGGTTCCCCTC
* * *
5747652 TGC-GTGC--TGC--CGT--AACCCTTGGTCTGGTCTAATCTTAGACTAGGAATGAACTCCGTAT
774 TGCTGTGCGATCCTACGTGCAACCCTTGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTAT
*
5747710 GCCTAAGCCAACCGATGAAACGAGCGGACGGGC---ACTACGTCGACCAG
839 GCCTAAGCCAACCGATGAAACGAGCGGGCGGGCGGGACTACGTCGACCAG
*** * * *
5747757 AGAGACGGGATGCGCAAGTAATGGATCGATAGGGTGGGAGGTGGGTTTGGGCACATATTCATATT
1 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * * * *
5747822 TCTGCTTGCCAGTTCCATTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCTCGTG
66 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * * * *
5747887 CAGTTTCATGGGAAGACGACTCGTTTTTTATTTTTCACGATTTTTGAAACTTTTTCCGATTCAGG
131 AAGTTTCATGGCAAGACGACTAGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
* *
5747952 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTAGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
196 ATTTTTTAAAATTTTTTCGAAAGGA-TTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTT
* *
5748017 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTAGAACTGTACAAGATTTTGTGACCATTTG-A
260 TTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAA
* *
5748081 AAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCT
325 AAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCT
*
5748146 CTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGTCCAAGTAC
390 CTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTAC
* * *
5748211 CAGCACCCATCACACATCATGTGTGCACACCCCCCCTGGCCCCCCCGATCGTCGGAACCCCAATG
455 CAGCACCCATCGCACATCATGTGCGCACACCCCCCC-GGCCCCCCCGATCGCCGGAACCCCAATG
* ** *
5748276 CAGCCAGTCAGGTTCTCCAGTGATGCTCCGATGATGGTG-CCCGACGAAGAAAAATG-CAGCACC
519 CCGCCAGTCAGGTTCTCCAGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGA-CACC
** * * * **
5748339 AGCACATGCCTAAGCCCAGCATGTACTGCCGCAACACTCGGTTCGGCCCGATCTTAGACTGGGAA
583 AGCACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGG-TCGATCCGATCTTAGACTGGGAA
5748404 TGAACTT
647 TGAACTT
5748411 AATATGCCTA
Statistics
Matches: 2175, Mismatches: 229, Indels: 98
0.87 0.09 0.04
Matches are distributed among these distances:
878 1 0.00
879 89 0.04
880 209 0.10
881 301 0.14
884 71 0.03
886 1 0.00
887 1 0.00
888 1 0.00
890 2 0.00
892 1 0.00
893 2 0.00
894 1 0.00
895 4 0.00
896 194 0.09
897 4 0.00
899 1 0.00
902 2 0.00
903 294 0.14
904 16 0.01
905 625 0.29
906 25 0.01
907 56 0.03
908 1 0.00
911 3 0.00
912 1 0.00
913 6 0.00
914 259 0.12
915 4 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (888 bp):
AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
AAGTTTCATGGCAAGACGACTAGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGGTTCGGG
ATTTTTTAAAATTTTTTCGAAAGGATTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
TTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
AAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTC
TTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
AGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCC
GCCAGTCAGGTTCTCCAGTGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGTGACACCAGC
ACATGCCCGAGCCCAGCATGTGCTGCCACAACCCTCGGTCGATCCGATCTTAGACTGGGAATGAA
CTTCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
GTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGTCGGGGACCGATCGGGTTCCCCTCTGCTGTG
CGATCCTACGTGCAACCCTTGGTCCGGTCTGATCTTAGACTAGGAATGAACTCCGTATGCCTAAG
CCAACCGATGAAACGAGCGGGCGGGCGGGACTACGTCGACCAG
Found at i:5747548 original size:26 final size:26
Alignment explanation
Indices: 5747512--5747564 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5747502 CCGGTCCGAT
*
5747512 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5747538 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5747564 C
1 C
5747565 CTAAGTGAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5751508 original size:26 final size:26
Alignment explanation
Indices: 5751472--5751524 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5751462 CCAGTTCGAT
*
5751472 CTTAGACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
5751498 CTTACACTGGGAATGAACTCCGTATG
1 CTTACACTGGGAATGAACTCCGTATG
5751524 C
1 C
5751525 CTAAGTTAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTACACTGGGAATGAACTCCGTATG
Found at i:5753292 original size:26 final size:26
Alignment explanation
Indices: 5753256--5753308 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
5753246 CTGGTCCGAT
*
5753256 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5753282 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5753308 C
1 C
5753309 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5754195 original size:26 final size:26
Alignment explanation
Indices: 5754158--5754210 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5754148 CCGGTCTGAT
* *
5754158 CTTAGACTGGGAATGAACTCCTTATG
1 CTTAGACCGGGAATGAACTCCGTATG
5754184 CTTAGACCGGGAATGAACTCCGTATG
1 CTTAGACCGGGAATGAACTCCGTATG
5754210 C
1 C
5754211 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACCGGGAATGAACTCCGTATG
Found at i:5755087 original size:26 final size:26
Alignment explanation
Indices: 5755051--5755129 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
5755041 CTGGTCTGAT
5755051 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
5755077 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5755103 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
5755129 C
1 C
5755130 CTAAGTCAAC
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.19, G:0.27, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:5756020 original size:26 final size:26
Alignment explanation
Indices: 5755977--5756029 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
5755967 CCGGTCCGAT
* *
5755977 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGAGAACGAACTTCGTATG
5756003 CTTAGACTGAGAACGAACTTCGTATG
1 CTTAGACTGAGAACGAACTTCGTATG
5756029 C
1 C
5756030 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGAGAACGAACTTCGTATG
Found at i:5757820 original size:26 final size:26
Alignment explanation
Indices: 5757779--5757832 Score: 72
Period size: 26 Copynumber: 2.1 Consensus size: 26
5757769 TCTGGTCCGA
5757779 GCTTAGACCGGAAATGAACTCCATAT
1 GCTTAGACCGGAAATGAACTCCATAT
* * * *
5757805 GCTTAGACTGGGAATGATCTCCGTAT
1 GCTTAGACCGGAAATGAACTCCATAT
5757831 GC
1 GC
5757833 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 4, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.22, G:0.24, T:0.26
Consensus pattern (26 bp):
GCTTAGACCGGAAATGAACTCCATAT
Found at i:5758718 original size:26 final size:26
Alignment explanation
Indices: 5758682--5758734 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
5758672 CTGGTCCGAT
5758682 CTTAGACTGGGAATAAACTCTATATG
1 CTTAGACTGGGAATAAACTCTATATG
* * *
5758708 CTTAGATTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATAAACTCTATATG
5758734 C
1 C
5758735 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.15, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCTATATG
Done.