Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 19268551
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 68000 characters in sequence are not A, C, G, or T
File 55 of 120
Found at i:6304784 original size:26 final size:26
Alignment explanation
Indices: 6304755--6304807 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6304745 GTTAACCTAG
6304755 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6304781 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6304807 G
1 G
6304808 ATTGGACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6307375 original size:26 final size:26
Alignment explanation
Indices: 6307339--6307391 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6307329 GTTGACTTAG
6307339 GCATAGGGAGTTCATTCCCAGTCTAA
1 GCATAGGGAGTTCATTCCCAGTCTAA
*
6307365 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATAGGGAGTTCATTCCCAGTCTAA
6307391 G
1 G
6307392 ATCGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.23, G:0.23, T:0.28
Consensus pattern (26 bp):
GCATAGGGAGTTCATTCCCAGTCTAA
Found at i:6308292 original size:26 final size:26
Alignment explanation
Indices: 6308242--6308292 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
6308232 GTTGACTTAG
* *
6308242 GCATACGGAGTTCATTTCTACTCTAA
1 GCATACGGAGTTCATTCCCACTCTAA
*
6308268 GCATACGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCACTCTA
6308293 GGATTGGACC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.25, G:0.18, T:0.31
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCACTCTAA
Found at i:6309185 original size:26 final size:26
Alignment explanation
Indices: 6309149--6309201 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6309139 GTTGACTTAG
*
6309149 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6309175 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6309201 G
1 G
6309202 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6311816 original size:26 final size:26
Alignment explanation
Indices: 6311787--6311839 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
6311777 GTTGACTTAG
*
6311787 GCATACAGAGTTCATTCCCATTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
** *
6311813 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6311839 G
1 G
6311840 ATTTGACCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.23, G:0.17, T:0.32
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6311955 original size:185 final size:185
Alignment explanation
Indices: 6311629--6311988 Score: 494
Period size: 185 Copynumber: 1.9 Consensus size: 185
6311619 TTGGCTTAGC
6311629 CATACGGAGTTCATTCCCTGTCTAAGATCAGACCGGACTGAGGGTTACAGCAGCAGGATCGACAG
1 CATACGGAGTTCATTCCCTGTCTAAGATCAGACCGGACTGAGGGTTACAGCAGCAGGATCGACAG
* * ** * * * *
6311694 TATGCAGATGGGGACCCAGCCGATCCCTGACTTGCTTATCCCACCCCTCTGGCTGGCTGAGCGAC
66 CACGCAGATGGGGACCCAGCCGATCCCCAACTTGCGTATCCCACCCCTCTGCCCGACTGAGCGAC
*
6311759 CGCATGCTCATTTCGTGGGTTGACTTAGGCATAC-AGAGTTCATTCCCATTCTAAG
131 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGA-AGTTCATTCCCATTCTAAG
* ** * * * *
6311814 CATATGGAGTTCATT-CCTAGTCTAAGATTTGACCGGGCTGAGGGTTGCGGCAGCAGGATCGGCA
1 CATACGGAGTTCATTCCCT-GTCTAAGATCAGACCGGACTGAGGGTTACAGCAGCAGGATCGACA
* *
6311878 GCACGCAGA-GGGAGACTCGGCCGATCCCCAACTTGCGTATCCCACCCCTCTGCCCGACTGAGC-
65 GCACGCAGATGGG-GACCCAGCCGATCCCCAACTTGCGTATCCCACCCCTCTGCCCGACTGAGCG
6311941 ACCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTC
129 A-CCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTC
6311989 ATAGTCTAAG
Statistics
Matches: 153, Mismatches: 18, Indels: 8
0.85 0.10 0.04
Matches are distributed among these distances:
184 7 0.05
185 145 0.95
186 1 0.01
ACGTcount: A:0.21, C:0.29, G:0.26, T:0.23
Consensus pattern (185 bp):
CATACGGAGTTCATTCCCTGTCTAAGATCAGACCGGACTGAGGGTTACAGCAGCAGGATCGACAG
CACGCAGATGGGGACCCAGCCGATCCCCAACTTGCGTATCCCACCCCTCTGCCCGACTGAGCGAC
CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGAAGTTCATTCCCATTCTAAG
Found at i:6314787 original size:841 final size:837
Alignment explanation
Indices: 6313537--6316116 Score: 2577
Period size: 841 Copynumber: 3.0 Consensus size: 837
6313527 GGCTTAGGCA
* *** * *
6313537 TACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGCAGCACATGCTGGGCTC
1 TACGGAGTTCATTCCCAGTCTAAGATTGGACCAAATCGAGGGTTGCGGCAGCACATGCTGGACTC
* * *** * *
6313602 GGGCATGTGCTGGTGCCATATTTTTCTTCGTTGAGCCACCATCGTCAGAGCATCACCGGAGCATT
66 AGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGTCGGAGCAT---C--AGC---
** * * *
6313667 GTCAGAGAACCTGATTGGCGGCATTGGGGTTCCGGTGATCGGGGGGGCC-GAGGGGGTGTGCGCA
123 --CAGAGAACCTGACCGACGACTTTGGGGTTCCGGTGATC--GGGGGCCGGA-GGGGTGTGCGCA
*
6313731 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
183 CATGATGTGAGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG
* * *
6313796 AGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGACATTAAAGT
248 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * * * * *
6313861 GTGTAAAATGGGGACACTTTTTTCAAATTGTCACAAAATATTGTACACTTCAAGTTTTTAGCTGA
313 GTCTGAAATGGGGACAATTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
* *
6313926 ATGTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTTTACCAATTTTGGGGCCAAAACTCCT
378 AT-TTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCT
* * *
6313991 TCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACG
442 TTCGAAAAAATTTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACG
*
6314056 AGTCGTCTTGCCATGAAAC-CACTTGTGAAGGCTTAAGGGACCATTGTATGAATTTTCAAGCCAA
507 AGTCGTCTTGCCATGAAACTCAC--GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAA
* * * *
6314120 AAAAATGACATTGGTATGCAAAAATATGAAGATGTGCCTAAACCAACCTATCACCCTATCGATCC
570 AAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCC
* * * *
6314185 ACGGCTTACGCATCCCGTCTCTCTAGCCAGCGTAGTGCCCGCCTGCCCA-CTCGTTTCATCAGTT
635 ACGGCTTGCGCATCCCGTCTCTCTGGCC-GCGTAGTGCCCGCCCGCCCACCTCGTTTCATCGGTT
* * * * *
6314249 GGCTTAGGCATACAGAGTTCATTCCTAGTGTAAGATCAGATCGGACTGAGGGTTGCAGCCGTAGG
699 GGCTTAGGCATACAGAGTTCATTCCTAGTCTAAGATCGGACCGGACTGAGGGTTGC-GCAGCAGG
* ** *
6314314 ATCAGTAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTGTGCATCCTGCCCCTCTAGCCGGC
763 ATCAGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTACGCATCCCGCCCCTCTAGCCGGC
6314379 TAAGCGCCCG
828 TAAGCGCCCG
*
6314389 TACGGAGTTCATTCCCAATCTAAGATTGGACCAAATCGAGGGTTGCGGCAGCACATGCTGGACTC
1 TACGGAGTTCATTCCCAGTCTAAGATTGGACCAAATCGAGGGTTGCGGCAGCACATGCTGGACTC
*
6314454 AGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGTCGGAGCATC-GCCGGAGAAC
66 AGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGTCGGAGCATCAGCCAGAGAAC
*
6314518 CTGACCGACGACTTTGGGGTTTCGGTGATCAGGAGGGCCGGAGGGGTGTGCGCACATGATGTGAG
131 CTGACCGACGACTTTGGGGTTCCGGTGATC-GG-GGGCCGGAGGGGTGTGCGCACATGATGTGAG
*
6314583 ATGGGTGCTGGTACTTGGCCCTTATATTGCCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
6314648 CCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGG
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
6314713 GGACAATTTTTTCAAATAGTTACAAAATCTTGTTCACTTCGAGTTTTTAGCTGAATCTTTTTATG
324 GGACAATTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-TTTTTGTG
* *
6314778 CATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCCTTTCG----AA-
388 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAAT
*
6314838 --TAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGC
453 TTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
* * *
6314901 CATGAAACTTAACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCC-ATAAAATGGCATT
518 CATGAAAC-TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAAAAAAATGGCATT
*
6314965 GGCA--CATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCG
582 GGCATGCA-A-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
6315028 CATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACCCGCTCGTTTCGTCGGTTGGA
645 CATCCCGTCTCTCTGGCCG-CGTAGT----GCCCGCCCGCCCA--C-CTCGTTTCATCGGTTGGC
* * * * *
6315093 TTAGGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGGCAACAAGACC
702 TTAGGCATACAGAGTTCATTCCTAGTCTAAGATCGGACCGGACTGAGGGTTGC-GCAGCAGGA-T
* * * * * *
6315158 CA-CAGCACGTAGAGGGGGACCCGGTTGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTG
765 CAGCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTACGCATCCCGCCCCTCTAGCCGGCTA
6315222 AGCGCCCG
830 AGCGCCCG
* ** * ** * * * * *
6315230 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT-CATTCCCAGTCTATGCATACGGAGTT
1 TACG-GAG-TTC----ATT--CCCAGTC-TA-AGA-TTGGA---CCA---AAT-C-GA-GG-GTT
** * * * * * * **
6315294 -CATTCCCAGTCTAAGATCGAATCGGACTAAGG-GT-TGC-AGTAG-CACATGTTGGCCTCGGGC
45 GC---GGCAG-C--ACAT-G-CT-GGACTCAGGCATGTGCTGGT-GCCACAT-TT---TTC-TTC
* * * * * * * * * * * * * * *
6315354 ATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCACCG-GAGCATCG-TCGAAGAACCTA
95 A----C-CGAG--GCA----CCATCGTCGGAGCATCAGC-CAGAGAACCT-GACCGACG-ACTTT
*** * ** * * * *
6315417 ACCG--ACAAT-ATTGGGGTTCCGACGATCGGGGCGCCGGGAGCGGTGTGCACACATGATGTGTG
146 GGGGTTCCGGTGA-T--CG------------GGG-GCC-GGAGGGGTGTGCGCACATGATGTGAG
* *
6315479 AGGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAC
194 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
6315544 CCCTTTAAGGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
259 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
6315609 GGACAGTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAATTTTTTGTG
324 GGACAATTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTTTTGTG
* * *
6315674 CATGCCAACAAAAACACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCCTTTTGAAAAAAT
388 CATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAAT
* *
6315739 TTTAAAAAATCCCGACCCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
453 TTTAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
* *
6315804 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTGTGAATTTACAAGCCATAAAAATGGCATT
518 CATGAAAC-TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAAAAAAATGGCATT
* * *
6315869 GGCATGTAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCTATCGATCCACGGCTTGCGCA
582 GGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * *
6315934 TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGGCCCACCCGCCCGCTCGTTCCTTCGGTTGGCTT
647 TCCCGTCTCTCTGGCC-GCGTAGTGCCCGCCCGCCCA------C-CTCGTTTCATCGGTTGGCTT
* * *
6315999 AGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGA-TCGAGGGTTGCGACAGCAGGATCA
704 AGGCATACAGAGTTCATTCCTAGTCTAAGATCGGACCGGACT-GAGGGTTGCG-CAGCAGGATCA
* * * *
6316063 GCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCTCGACCCTCT
767 GCAGCACGCAGAGGGGGACCCGGTCGATCCCCGACTTACGCATCCCGCCCCTCT
6316117 GGCTGGCTGA
Statistics
Matches: 1448, Mismatches: 177, Indels: 154
0.81 0.10 0.09
Matches are distributed among these distances:
831 2 0.00
832 2 0.00
833 87 0.06
834 104 0.07
836 2 0.00
837 14 0.01
840 2 0.00
841 421 0.29
842 5 0.00
843 3 0.00
846 2 0.00
847 2 0.00
849 4 0.00
850 2 0.00
851 3 0.00
852 106 0.07
854 3 0.00
857 2 0.00
858 1 0.00
859 1 0.00
860 3 0.00
861 3 0.00
863 3 0.00
864 1 0.00
866 10 0.01
867 7 0.00
868 2 0.00
869 8 0.01
870 2 0.00
871 2 0.00
875 1 0.00
876 2 0.00
878 3 0.00
881 1 0.00
882 14 0.01
883 10 0.01
884 7 0.00
894 2 0.00
895 4 0.00
896 254 0.18
897 3 0.00
900 14 0.01
903 112 0.08
904 210 0.15
905 1 0.00
906 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (837 bp):
TACGGAGTTCATTCCCAGTCTAAGATTGGACCAAATCGAGGGTTGCGGCAGCACATGCTGGACTC
AGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGTCGGAGCATCAGCCAGAGAAC
CTGACCGACGACTTTGGGGTTCCGGTGATCGGGGGCCGGAGGGGTGTGCGCACATGATGTGAGAT
GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
ACAATTTTTTCAAATAGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTGTGCAT
GCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTT
AAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
GAAACTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCAAAAAAATGGCATTGGCA
TGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
GTCTCTCTGGCCGCGTAGTGCCCGCCCGCCCACCTCGTTTCATCGGTTGGCTTAGGCATACAGAG
TTCATTCCTAGTCTAAGATCGGACCGGACTGAGGGTTGCGCAGCAGGATCAGCAGCACGCAGAGG
GGGACCCGGTCGATCCCCGACTTACGCATCCCGCCCCTCTAGCCGGCTAAGCGCCCG
Found at i:6315292 original size:26 final size:26
Alignment explanation
Indices: 6315256--6315306 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
6315246 GTTGACTTAG
6315256 GCATACGGAGTTCATTCCCAGTCTAT
1 GCATACGGAGTTCATTCCCAGTCTAT
6315282 GCATACGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
6315307 AGATCGAATC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.24, C:0.27, G:0.20, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAT
Found at i:6316196 original size:26 final size:26
Alignment explanation
Indices: 6316160--6316212 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6316150 GTTGACTTAG
6316160 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6316186 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6316212 G
1 G
6316213 ATCGGACCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6316244 original size:904 final size:901
Alignment explanation
Indices: 6314389--6316786 Score: 3550
Period size: 902 Copynumber: 2.7 Consensus size: 901
6314379 TAAGCGCCCG
* * ** * *
6314389 TACGGAGTTCATTCCCAATCTAAGATTGGACCAAATCGAGGGTTGCGGCAGCACATGCTGGACTC
1 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTC
* *
6314454 AGGCATGTGCTGGTGCCACATTTTTCTTCACCGAGGCACCATCGTCGGAGCATCGCCGGAGAACC
66 GGGCATGTGCTGGTGCCACATTTTTCTTCA-CGAGGCACCATCGCCGGAGCATCGCCGGAGAACC
* * *
6314519 TGACCGACGACT-TTGGGGTTTCGGTGATCAGGAGGGCC-GGAGGGGTGTGCGCACATGATGTGA
130 TGACCGAC-AATATTGGGG-TTCCGCGATC-GG-GGGCCGGGAGGGGTGTGCGCACATGATGTGA
* *
6314582 GATGGGTGCTGGTACTTGGCCCTTATATTGCCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
191 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
* *
6314647 CCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATG
256 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
6314712 GGGACAATTTTTTCAAATAGTTACAAAATCTTGTTCACTTCGAGTTTTTAGCTGAATCTTTTTAT
321 GGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATCTTTTTAT
* *
6314777 GCATGCCAACAAAAATACAAGGATCACGTCAACCAAGTTTGGGGCCAAAACTCCTTTCG----AA
386 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAA
* *
6314838 ---TAAAAAATCTCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCGTCTTG
451 TTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
6314900 CCATGAAACTTAACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCAT-AAAATGGCAT
516 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
**
6314964 TGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGC
581 TGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGC
* *
6315029 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCACCCGCTCGTTTCGTCGGTTGGAT
646 ATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCACCCACCCGCTCGTTCCGTCGGTTGGAT
* *
6315094 TAGGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGGGTTGCGGCAACAAGACCC
711 TAGGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGACAACAAGACCC
** * * *
6315159 ACAGCACGTAGAGGGGGACCCGGTTGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAG
776 ACAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGACCCTCTGGCCGGCTGAG
*
6315224 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTATGCA
841 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * ** * * *
6315285 TACGGAGTTCATTCCCAGTCTAAGATCGAATCGGACTAAGGGTTGCAGTAGCACATGTTGGCCTC
1 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTC
* * * * *
6315350 GGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCACCGGAGCATCGTCGAAGAACC
66 GGGCATGTGCTGGTGCCACATTTTTCTTCA-CGAGGCACCATCGCCGGAGCATCGCCGGAGAACC
* * * *
6315415 TAACCGACAATATTGGGGTTCCGACGATCGGGGCGCCGGGAGCGGTGTGCACACATGATGTGTGA
130 TGACCGACAATATTGGGGTTCCG-CGATCGGGG-GCCGGGAGGGGTGTGCGCACATGATGTGAGA
*
6315480 GGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACC
193 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACC
* *
6315545 CCTTTAAGGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
258 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* * *
6315610 GACAGTTTTTTCAAATGGGCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAAT-TTTTTGTG
323 GACAATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATCTTTTTATG
* * *
6315674 CATGCCAACAAAAACACAAGGATCATGTCTACCAAGTTTGGGGCCAAAAATCCTTTTGAAAAAAT
387 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAAT
*
6315739 TTTAAAAAATCCCGACCCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
452 TTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
*
6315804 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTGTGAATTTACAAGCCATAAAAATGGCATT
517 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* *
6315869 GGCATGTAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCTATCGATCCACGGCTTGCGCA
582 GGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCA
* * * * *
6315934 TCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCGGCCCACCCGCCCGCTCGTTCCTTCGGTTGGCTT
647 TCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCACCCACCCGCTCGTTCCGTCGGTTGGATT
* * * * * *
6315999 AGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCAGA-TCGAGGGTTGCGACAGCAGGA-TC
712 AGGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCAGACT-GAGGGTTGCGACAACAAGACCC
* *
6316062 AGCAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCTCGACCCTCTGGCTGGCTGA
776 A-CAGCACACAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGACCCTCTGGCCGGCTGA
*
6316127 GTGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
840 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
**
6316189 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTCACCTC
1 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTC
* *
6316254 GGGCATGTG-TTGTGCCACATTTTTCTTCACTGTGGCACCATCGCCGGAGCATCGCCGGAGAACC
66 GGGCATGTGCTGGTGCCACATTTTTCTTCAC-GAGGCACCATCGCCGGAGCATCGCCGGAGAACC
**** *
6316318 TGACCTG-TGGCATTGGGGTTCCTGCGATCGGGGGGCCGGG-GGGGTGTGCGCACATGATGTGCG
130 TGACC-GACAATATTGGGGTTCC-GCGATC-GGGGGCCGGGAGGGGTGTGCGCACATGATGTGAG
*** **
6316381 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCGAACATCAAAAATTGAGAACTCACAC
192 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAC
* *
6316446 CCCCTTAAAGAGCATTTGAGATTTTACAGGCTTGCCGCCAGTAGCCATTAAAGTGTCTGAAATGG
257 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * * * * * * *
6316511 GGACACTTCTTTCAAATGCTCCCAAAATCTTATACACTTCGATTTTTTAGCTGATTGTTTTTATG
322 GGACAATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATCTTTTTATG
* *
6316576 CATGCCAACAAAAATACACGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAAT
387 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAAT
* ** *
6316641 TTTAAAAAATCCCGAACCGCTAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGC
452 TTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
*
6316706 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCGTAAAAATGGCATT
517 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
*
6316771 GGCATGCAGAAATATG
582 GGCATGTAGAAATATG
6316787 CAGAAACATG
Statistics
Matches: 1347, Mismatches: 135, Indels: 34
0.89 0.09 0.02
Matches are distributed among these distances:
894 2 0.00
895 11 0.01
896 380 0.28
897 3 0.00
900 2 0.00
901 2 0.00
902 392 0.29
903 186 0.14
904 369 0.27
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (901 bp):
TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGCCTC
GGGCATGTGCTGGTGCCACATTTTTCTTCACGAGGCACCATCGCCGGAGCATCGCCGGAGAACCT
GACCGACAATATTGGGGTTCCGCGATCGGGGGCCGGGAGGGGTGTGCGCACATGATGTGAGATGG
GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCC
TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
AATTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATCTTTTTATGCATG
CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTTGAAAAAATTTTA
AAAAATCCCGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
TGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACAGCTTGCGCATCCC
GTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCACCCACCCGCTCGTTCCGTCGGTTGGATTAGGC
ATACCGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGACAACAAGACCCACAGC
ACACAGAGGGGGACCCGGTCGATCCCCGGCTTACGCATCCCGACCCTCTGGCCGGCTGAGCGCCC
GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
Found at i:6318437 original size:26 final size:26
Alignment explanation
Indices: 6318401--6318453 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6318391 GTTGACTTAG
6318401 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6318427 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6318453 G
1 G
6318454 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6319337 original size:26 final size:26
Alignment explanation
Indices: 6319301--6319353 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6319291 GTTGACTTAG
*
6319301 GCATACGGAGTTCATTCCCCGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6319327 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6319353 G
1 G
6319354 ATCGGATTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.28, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6320228 original size:26 final size:26
Alignment explanation
Indices: 6320198--6320249 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
6320188 GTTGACTTAG
*
6320198 GCATA-CGATGTTCATTCCCAGTCTAA
1 GCATATCGA-GTTCATTCCCAGCCTAA
*
6320224 GCATATGGAGTTCATTCCCAGCCTAA
1 GCATATCGAGTTCATTCCCAGCCTAA
6320250 TATCGGATTA
Statistics
Matches: 23, Mismatches: 2, Indels: 2
0.85 0.07 0.07
Matches are distributed among these distances:
26 21 0.91
27 2 0.09
ACGTcount: A:0.27, C:0.27, G:0.17, T:0.29
Consensus pattern (26 bp):
GCATATCGAGTTCATTCCCAGCCTAA
Found at i:6320995 original size:887 final size:890
Alignment explanation
Indices: 6318371--6321890 Score: 4632
Period size: 899 Copynumber: 3.9 Consensus size: 890
6318361 AGCCCGCCCT
* * * *
6318371 CCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * ** * *
6318436 GTTCATTCCCAGTCTAAGATCAGACCGGA-CAGAGGTTTACGGCAACACATGCTTGACTCGGGCA
66 GTTCATTCCCAGTCTAAGATCGGATCGGACCA-AGGGTTGCTACAACACATGCTGGGCTCGGGCA
* * * * *
6318500 TGTGCTGGTGCCGTATTTTTCTTCACCGGGGCACCATCGCGAGAGGATCGCTAGAGAACCTGACC
130 TGTGCTGGTGCCGCATTTTTCTCCACCGAGGCACCA-CTC-----GA-CGC-GGAGAACCTGACC
* * *
6318565 GACGGCATTGAGGTTTCGACGATCGGGGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGT
187 GACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCACACATGATGTGCGATGGGT
6318629 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTT
252 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC-AGAACTCACACCCCCTT
* * *
6318694 AAAAAGCATTTGAGATTTTGCAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
316 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
*
6318759 TTTTTTCAAATGGTCACAAAATCTTGTACA-TTTCGAGTTTTTAAATGAATTTTTTTGTGCATGC
381 TTTTTTCAAATGGTCACAAAATCTTGTACACTTT-GAGTTTTTAGATGAATTTTTTTGTGCATGC
* * * * *
6318823 CAACAAAAATACAAGGATCACGTCT---AAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTAAAA
445 CAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTGAAAAAATTTTAAA
* * *
6318885 ACAATCCCAAACCGGAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATGA
510 A-AATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* * *
6318950 AACTTCACGTGAAGGCTTAAGGGACCACTGTATGAATTTAGAAGCCATGAAAATGGCATTGGCAT
574 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
* *
6319015 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCCCA
639 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* * * *
6319080 TCTCTCTGGCCGACGTAGTGCCCGCCCGTTCGCCCGTCCGCTCCTTTCATCGATTGGCTTAGGCA
704 TCTCTCTGGCCGGCGTAGTGCCCGCCCG-T---CCGCCCGCTCCTTTCGTCGGTTGGCTTAGGCA
* * **
6319145 TACTGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGCTACGGCAGCAGGATCGACAGCA
765 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCA
*** * * * * * *
6319210 TGCAGAGGGGGACCTGATAGATCCGCAGCTTGCTCAACCCGCCCATCTGGCCGGCTGAGCG
830 TGCAGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCAGCCCCTCTGGCCGGCTGAGCG
* *
6319271 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCCGTCTAAGCATACGGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * *
6319336 GTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGATTGCTGCAAAACATGCTGGGCTCGGGCAT
66 GTTCATTCCCAGTCTAAGATCGGATCGGACCAAGGGTTGCTACAACACATGCTGGGCTCGGGCAT
* ***
6319401 GTGCTGGTGCCGTATTTTTCTCTGTCGAGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCG
131 GTGCTGGTGCCGCATTTTTCTCCACCGAGGCACCA-C-TC---G-A-CG-CGGAGAACCTGACCG
* * * *
6319466 ACGGCATTGGGGTTCCGATGATC-GGGGGGCCGGTGGGGGTGTGCGCACATGATGTACGATGGCT
188 ACGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGGTGTGCACACATGATGTGCGATGGGT
*
6319530 GCTGGTTCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCATGAACTCACACCCCCTT
252 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCA-GAACTCACACCCCCTT
* * *
6319595 AAAGAGCATTTGAGATTTTACAGGTTTTCTACCAGTAGCCATTAAAGTGTCTGAAATGTGGACAC
316 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
6319660 -TTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGATTTTTTTTGTGCATGCC
381 TTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGATGAATTTTTTTGTGCATGCC
*
6319724 AAGAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTTCGAAAAAATTTT-AA
446 AAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CTTTTGAAAAAATTTTAAA
** **
6319787 AAATCCCAAACCGCAAAAAGTTTTGAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGTTATGAA
510 AAATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* *
6319852 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGAATTGGCACG
575 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
*
6319917 CAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
640 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* ** ** * *
6319982 CTCTCTGGCCGGCGTAGTGCCCACCCG-CCGGCCTACTTGTTCCATCGGTTGGCTTAGGCATACG
705 CTCTCTGGCCGGCGTAGTGCCCGCCCGTCC-GCCCGCTCCTTTCGTCGGTTGGCTTAGGCATACG
*
6320046 GAGTTCATTCCCAGTCTAAGATCAGACC-GAATCGAGGGTTGTGGCAGCAGGATCGACAGCATGC
769 GAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGATCGACAGCATGC
* *
6320110 AGAGGGGGACCCGGCCGATCCTCGGCTTGCGCATCCAGCCCCTCTGGCCGGCTGAGCG
833 AGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCAGCCCCTCTGGCCGGCTGAGCG
*
6320168 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATAC-GATGTTCATTCCCAGTCTAAGCATATGG
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGA-GTTCATTCCCAGTCTAAGCATACGG
* * ** * * *
6320232 AGTTCATTCCCAGCCTAATATCGGATTAGATCAAGGGTTGTTACAGCACATGCTGGGCTCGGGCA
65 AGTTCATTCCCAGTCTAAGATCGGATCGGACCAAGGGTTGCTACAACACATGCTGGGCTCGGGCA
* * *** *
6320297 CGTGCTGGTGCCACATTTTTCTCCGTTGAGGCACCA-TCG-C-CGGAGAACCTGACTGACGGCAT
130 TGTGCTGGTGCCGCATTTTTCTCCACCGAGGCACCACTCGACGCGGAGAACCTGACCGACGGCAT
* * *
6320359 TGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGTACACATGATGTTCGATGGGTGCTGGTTC
195 TGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTAC
* * *
6320424 TTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTTGCA-AACTCACACCCCCTTACAGGGC
260 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACC-T-CAGAACTCACACCCCCTTAAAGAGC
* *
6320488 ATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTT
323 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* * *
6320553 GAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGATTTTTTTTGTGCATGCCAAGAAAA
388 AAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGATGAATTTTTTTGTGCATGCCAAGAAAA
* *
6320618 ATACAAGGATCACGTCTACCAAGTTTGGGCCCAAAACTACTTTTGAAAAAATTTTAAAAAATCCT
453 ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CTTTTGAAAAAATTTTAAAAAATCCC
* * * * *
6320683 GAACCACAAAAATTTTCGAAAATCCTGAAAAATGGAAAACGAGTCGTCTTGCCATGAAACTTCAC
517 AAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
*
6320748 GTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAGAAAT
582 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
6320813 ATGAAGATGTGCCTAAACCCACCTACCA-CCTATCGATCCACGGCTTGCG-ATCCCGTCTCTCTG
647 ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTG
* * * * * ** * * *
6320876 GCCGGCGCAATGTCCGCCCGTCCACCCGCTCGTTTCGTTAGTTGGCTTAGGTACACAGAGTTCAT
712 GCCGGCGTAGTGCCCGCCCGTCCGCCCGCTCCTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * *
6320941 TCCCAGTCTAGGATCAGACCAGACCGAGGGTTGTGACAGAAGGATCGGCAGCATGTAGATGGGGA
777 TCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCATGCAGAGGGGGA
*
6321006 CCTGGCCGATCCCCGGCTTGCGCATCCCA-CCCCTCTGGCCGGTTGAGCG
842 CCTGGCCGATCCCCGGCTTGCGCAT-CCAGCCCCTCTGGCCGGCTGAGCG
* * * * *
6321055 CCCGCTCGCTCGTTTCATGGGTTGACTTTGGCATATGGAGTTCATTCACAGTCTAAGCATACAGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * *** *
6321120 GTTCATTCCCAGTCTAAGATCGGACCGAACCAAGGTTTACGGTAGCACATGCTGGGCTCGGGCAT
66 GTTCATTCCCAGTCTAAGATCGGATCGGACCAAGGGTTGCTACAACACATGCTGGGCTCGGGCAT
* * * * *
6321185 TTGCTGGTGCCGCATTTTTCTTCACTGGGGCACCATCGTCGTACCATCATCGGAGAACCTGACCG
131 GTGCTGGTGCCGCATTTTTCTCCACCGAGGCACCA-C-TCG----A-C-GCGGAGAACCTGACCG
* * * * * * *
6321250 GCGGTATTGTGGTTCCGATGATCGGGGGGGTCGGGGGGGGTGTACGCACATGATGTGCGATGGGT
188 ACGGCATTGGGGTTCCGACGATCGGGGGGG-CCGGGGGGGTGTGCACACATGATGTGCGATGGGT
*
6321315 GTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
252 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC-AGAACTCACACCCCCTT
* * *
6321380 AAAGTGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACAC
316 AAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
** *
6321445 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGATGAATTTTTTTGTGCATGTC
381 TTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGATGAATTTTTTTGTGCATGCC
* * * ** *
6321510 AATAAAAATACAGGGATCACTTCTACCAAGTTTGGGGCCAATTCTCTTTCTAAAAAAATTTTAAA
446 AAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTT-TGAAAAAATTTTAAA
* ** * *
6321575 AAATCCCAAACCGCAAAAAGTTTAAAAAATTGTGAAAAATAGAGAATGAGTCGTCTTGCCATGAA
510 AAATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
* * * * * *
6321640 ACTTCATGGGAAGGGTTAAAGGACCATTTTATGAATTTACAAGCCAGAAAAATGGCATTGGCATG
575 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
* *
6321705 CAGAAATATGGAGATGTGCCTAAACCCACGTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
640 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
*
6321770 CTCTCTGGCCGGCGTAGTGCTCGCCCGTCCGCTCGCCCGCCCGCTCCTTTCGTCGGTTGGCTTAG
705 CTCTCTGGCCGGCGTA--G-T-GCCCG--C-C-CGTCCGCCCGCTCCTTTCGTCGGTTGGCTTAG
* * * *
6321835 CCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGATGCGGCAGCA
762 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCA
6321891 CATGTTGGGC
Statistics
Matches: 2318, Mismatches: 252, Indels: 91
0.87 0.09 0.03
Matches are distributed among these distances:
886 180 0.08
887 401 0.17
888 57 0.02
889 155 0.07
890 3 0.00
891 1 0.00
894 2 0.00
896 6 0.00
897 277 0.12
898 46 0.02
899 412 0.18
900 286 0.12
901 381 0.16
902 14 0.01
903 17 0.01
904 1 0.00
905 4 0.00
907 1 0.00
908 1 0.00
909 73 0.03
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (890 bp):
CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
GTTCATTCCCAGTCTAAGATCGGATCGGACCAAGGGTTGCTACAACACATGCTGGGCTCGGGCAT
GTGCTGGTGCCGCATTTTTCTCCACCGAGGCACCACTCGACGCGGAGAACCTGACCGACGGCATT
GGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACT
TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAGAACTCACACCCCCTTAAAGAGCATT
TGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAA
TGGTCACAAAATCTTGTACACTTTGAGTTTTTAGATGAATTTTTTTGTGCATGCCAAGAAAAATA
CAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTTGAAAAAATTTTAAAAAATCCCAAAC
CGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGA
AGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGA
AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCG
GCGTAGTGCCCGCCCGTCCGCCCGCTCCTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCC
AGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCATGCAGAGGGGGACCTG
GCCGATCCCCGGCTTGCGCATCCAGCCCCTCTGGCCGGCTGAGCG
Found at i:6321613 original size:899 final size:899
Alignment explanation
Indices: 6318371--6321890 Score: 4770
Period size: 887 Copynumber: 3.9 Consensus size: 899
6318361 AGCCCGCCCT
* * * *
6318371 CCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* * * *
6318436 GTTCATTCCCAGTCTAAGATCAGACCGGA-CAGAGGTTTACGGCAACACATGCTTGACTCGGGCA
66 GTTCATTCCCAGTCTAAGATCGGACCGAACCA-AGGTTTACGGCAACACATGCTGGGCTCGGGCA
* * * * **
6318500 TGTGCTGGTGCCGTATTTTTCTTCACCGGGGCACCATCG-CGAGAGGATCGCTAGAGAACCTGAC
130 TGTGCTGGTGCCGCATTTTTCTTCACTGAGGCACCATCGTCGACATCATCG---GAGAACCTGAC
* * *
6318564 CGACGGCATTGAGGTTTCGACGATCGGGGGGGCC--GGGGGGTGTGCGCACATGATGTGCGATGG
192 CGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTACGCACATGATGTGCGATGG
*
6318627 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCC
257 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
* *
6318692 TTAAAAAGCATTTGAGATTTTGCAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
322 TTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
* *
6318757 ACTTTTTTCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTAAATGAATTTTTTTGTGCATG
387 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTGTGCATG
* *
6318822 CCAACAAAAATACAAGGATCACGTCT---AAGTTTGGGGCCAAAACTCCTTTCAAAAAAA-TTAA
452 CCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTTTA
* * *
6318883 AAACAATCCCAAACCGGAAAAAGTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCAT
517 AAA-AATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCAT
* * *
6318948 GAAACTTCACGTGAAGGCTTAAGGGACCACTGTATGAATTTAGAAGCCATGAAAATGGCATTGGC
581 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
*
6319013 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCATCC
646 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* * * * *
6319078 CATCTCTCTGGCCGACGTAGTGCCCGCCCGTTCGCCCGTCCGCTCCTTTCATCGATTGGCTTAGG
711 CGTCTCTCTGGCCGGCGTAGTGCCCGCCCG-T---CCGCCCGCTCCTTTCGTCGGTTGGCTTAGG
* * **
6319143 CATACTGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGCTACGGCAGCAGGATCGACAG
772 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAG
*** * * * * * *
6319208 CATGCAGAGGGGGACCTGATAGATCCGCAGCTTGCTCAACCCGCCCATCTGGCCGGCTGAGCG
837 CATGCAGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAGCG
* *
6319271 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCCGTCTAAGCATACGGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
** * * * * * *
6319336 GTTCATTCCCAGTCTAAGATCGGATTGGACCGAGGATTGCTGCAAAACATGCTGGGCTCGGGCAT
66 GTTCATTCCCAGTCTAAGATCGGACCGAACCAAGGTTTACGGCAACACATGCTGGGCTCGGGCAT
* ** *
6319401 GTGCTGGTGCCGTATTTTTC-TCTGTCGAGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACC
131 GTGCTGGTGCCGCATTTTTCTTCACT-GAGGCACCATCGTC-GA-CATCATCGGAGAACCTGACC
* * * * *
6319465 GACGGCATTGGGGTTCCGATGATC-GGGGGGCCGGTGGGGGTGTGCGCACATGATGTACGATGGC
193 GACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTACGCACATGATGTGCGATGGG
*
6319529 TGCTGGTTCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTC-ATGAACTCACACCCCC
258 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGA-GAACTCACACCCCC
* *
6319593 TTAAAGAGCATTTGAGATTTTACAGGTTT-TCTACCAGTAGCCATTAAAGTGTCTGAAATGTGGA
322 TTAAAGAGCATTTGAGATTTTACAGGTTTGT-TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA
* * *
6319657 CAC-TTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGATTTTTTTTGTGCAT
386 CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTGTGCAT
*
6319721 GCCAAGAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCCAAAACTCCTTTCGAAAAAATTTT
451 GCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTTT
** **
6319785 -AAAAATCCCAAACCGCAAAAAGTTTTGAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGTTAT
516 AAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCAT
*
6319849 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGAATTGGC
581 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
* *
6319914 ACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
646 ATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* ** ** * *
6319979 CGTCTCTCTGGCCGGCGTAGTGCCCACCCG-CCGGCCTACTTGTTCCATCGGTTGGCTTAGGCAT
711 CGTCTCTCTGGCCGGCGTAGTGCCCGCCCGTCC-GCCCGCTCCTTTCGTCGGTTGGCTTAGGCAT
*
6320043 ACGGAGTTCATTCCCAGTCTAAGATCAGACC-GAATCGAGGGTTGTGGCAGCAGGATCGACAGCA
775 ACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGTGGCAGCAGGATCGACAGCA
* *
6320107 TGCAGAGGGGGACCCGGCCGATCCTCGGCTTGCGCAT-CCAGCCCCTCTGGCCGGCTGAGCG
839 TGCAGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCA-CCCCTCTGGCCGGCTGAGCG
*
6320168 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATAC-GATGTTCATTCCCAGTCTAAGCATATGG
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGA-GTTCATTCCCAGTCTAAGCATACGG
* * ** * * **** *
6320232 AGTTCATTCCCAGCCTAATATCGGA-TTAGATCAAGGGTTGTTACAGCACATGCTGGGCTCGGGC
65 AGTTCATTCCCAGTCTAAGATCGGACCGA-ACCAAGGTTTACGGCAACACATGCTGGGCTCGGGC
* * * ** *
6320296 ACGTGCTGGTGCCACATTTTTCTCCGTTGAGGCACCA---TCG----C--CGGAGAACCTGACTG
129 ATGTGCTGGTGCCGCATTTTTCTTCACTGAGGCACCATCGTCGACATCATCGGAGAACCTGACCG
*
6320352 ACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGTA--CACATGATGTTCGATGGG
194 ACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGG-GTGTACGCACATGATGTGCGATGGG
* * *
6320415 TGCTGGTTCTTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTTGCA-AACTCACACCCCC
258 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCG-AGAACTCACACCCCC
* * * *
6320479 TTACAGGGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
322 TTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
** * * *
6320544 ACTTTTTTTGAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGATTTTTTTTGTGCATG
387 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTGTGCATG
* * **
6320609 CCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGCCCAAAACTACTTTTGAAAAAATTTTA
452 CCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTTTA
** * * * *
6320674 AAAAATCCTGAACCACAAAAATTTTCGAAAATCCTGAAAAATGGAAAACGAGTCGTCTTGCCATG
517 AAAAATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATG
*
6320739 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCA
582 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
6320804 TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCA-CCTATCGATCCACGGCTTGCG-ATCCC
647 TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
* * * * * ** * *
6320867 GTCTCTCTGGCCGGCGCAATGTCCGCCCGTCCACCCGCTCGTTTCGTTAGTTGGCTTAGGTACAC
712 GTCTCTCTGGCCGGCGTAGTGCCCGCCCGTCCGCCCGCTCCTTTCGTCGGTTGGCTTAGGCATAC
* * * * * *
6320932 AGAGTTCATTCCCAGTCTAGGATCAGACCAGACCGAGGGTTGTGACAGAAGGATCGGCAGCATGT
777 GGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCATGC
* *
6320997 AGATGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGTTGAGCG
842 AGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAGCG
* * * * *
6321055 CCCGCTCGCTCGTTTCATGGGTTGACTTTGGCATATGGAGTTCATTCACAGTCTAAGCATACAGA
1 CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
* *
6321120 GTTCATTCCCAGTCTAAGATCGGACCGAACCAAGGTTTACGGTAGCACATGCTGGGCTCGGGCAT
66 GTTCATTCCCAGTCTAAGATCGGACCGAACCAAGGTTTACGGCAACACATGCTGGGCTCGGGCAT
* *
6321185 TTGCTGGTGCCGCATTTTTCTTCACTGGGGCACCATCGTCGTACCATCATCGGAGAACCTGACCG
131 GTGCTGGTGCCGCATTTTTCTTCACTGAGGCACCATCGTCG-A-CATCATCGGAGAACCTGACCG
* * * * *
6321250 GCGGTATTGTGGTTCCGATGATCGGGGGGGTCGGGGGGGGTGTACGCACATGATGTGCGATGGGT
194 ACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTACGCACATGATGTGCGATGGGT
*
6321315 GTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
259 GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTT
* *
6321380 AAAGTGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACAC
324 AAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC
* *
6321445 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGATGAATTTTTTTGTGCATGTC
389 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTGTGCATGCC
* * * **
6321510 AATAAAAATACAGGGATCACTTCTACCAAGTTTGGGGCCAATTCT-CTTTCTAAAAAAATTTTAA
454 AAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTC-AAAAAAATTTTAA
* ** * *
6321574 AAAATCCCAAACCGCAAAAAGTTTAAAAAATTGTGAAAAATAGAGAATGAGTCGTCTTGCCATGA
518 AAAATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* * * * * *
6321639 AACTTCATGGGAAGGGTTAAAGGACCATTTTATGAATTTACAAGCCAGAAAAATGGCATTGGCAT
583 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
* *
6321704 GCAGAAATATGGAGATGTGCCTAAACCCACGTACCACCCTATCGATCCACGGCTTGCGCATCCCG
648 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
*
6321769 TCTCTCTGGCCGGCGTAGTGCTCGCCCGTCCGCTCGCCCGCCCGCTCCTTTCGTCGGTTGGCTTA
713 TCTCTCTGGCCGGCGTA--G-T-GCCCG--C-C-CGTCCGCCCGCTCCTTTCGTCGGTTGGCTTA
* * * *
6321834 GCCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGATGCGGCAGCA
770 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCA
6321891 CATGTTGGGC
Statistics
Matches: 2314, Mismatches: 249, Indels: 105
0.87 0.09 0.04
Matches are distributed among these distances:
886 171 0.07
887 404 0.17
888 61 0.03
889 155 0.07
890 3 0.00
893 1 0.00
894 2 0.00
896 9 0.00
897 271 0.12
898 55 0.02
899 402 0.17
900 283 0.12
901 377 0.16
902 28 0.01
903 12 0.01
904 1 0.00
905 4 0.00
907 1 0.00
908 1 0.00
909 73 0.03
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (899 bp):
CCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGA
GTTCATTCCCAGTCTAAGATCGGACCGAACCAAGGTTTACGGCAACACATGCTGGGCTCGGGCAT
GTGCTGGTGCCGCATTTTTCTTCACTGAGGCACCATCGTCGACATCATCGGAGAACCTGACCGAC
GGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGGTGTACGCACATGATGTGCGATGGGTGC
TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
AGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTGTGCATGCCAA
GAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTTCAAAAAAATTTTAAAAA
ATCCCAAACCGCAAAAAGTTTCAAAAATCCTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
CTCTGGCCGGCGTAGTGCCCGCCCGTCCGCCCGCTCCTTTCGTCGGTTGGCTTAGGCATACGGAG
TTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGTGGCAGCAGGATCGACAGCATGCAGAG
GGGGACCTGGCCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAGCG
Found at i:6323958 original size:877 final size:876
Alignment explanation
Indices: 6321803--6329700 Score: 8302
Period size: 877 Copynumber: 8.9 Consensus size: 876
6321793 CCCGTCCGCT
* * * * * *
6321803 CGCCCGCCCGCTCCTTTCGTCGGTTGGCTTAGCCATACGGAGTTCATTCCCAGTCTAAGATCAGA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * * *
6321868 CCGGACCGAGGGATGCGGCAGCACATGTTGGGCTCGGGCATGTGCTGGTGACC-CATTTTTCTTC
66 TCGGGCCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG-CCGCATTTTTCTTC
* * * * **
6321932 GTCGAGGCACCATCGTCGGAGCATCGTTGGAGAACCTGACTGACGGCATTGATGTTCCGACGATC
130 GTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
** * *
6321997 AGG-GGGGCTAGGGGGTGTGTGGACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
195 -GGAGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
* * *
6322061 CCCCCTATCCCTCATCAAA-CTTCAAGAACTCACACCCCCTTAAAGACCGTTTGAGATTTTACAG
259 CCCCCTATCCCTCATCAAACCTT-GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
6322125 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
323 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
6322190 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
388 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
* * *
6322255 TACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGCAAAACGTTT
453 TACCAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTT
* * *
6322319 TAAAAATCGTGAAAAATAGAAAACAAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
518 CAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
*
6322384 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAA
583 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAA
* * * * * * *
6322449 ACCCAGCTACTACCCTATCGATCCATGGCTTGCGCGTCCCGTCTCTCTTGCTGGCATAGTGCCCG
648 ACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCTCG
* * *
6322514 CCTGCCCGCCCACCCGCTCGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
713 CCCGCCCG-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* ** ** *
6322579 ATTGGACCAGACCGAGGGTTGCGACAGCAGGATCGGCAGCACGCAGA---GG----G---GATCC
777 ATCGGACTGGACCGAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCC
* **
6322634 CCAGCTTGCGCATCCCGTCCCTCTGGCCGGCTGAG
842 CCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* *
6322669 CGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAGATCGGA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * * * * *
6322734 CCGGACCAAGGGTGGTGGCAGCACATGCTGGGCTC-AGCGATGTGCTGGTGCCGCATTTTTCTTC
66 TCGGGCCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGC-ATGTGCTGGTGCCGCATTTTTCTTC
** * * * * * *
6322798 ACCGGGGCACCATCGTCAGAGCATCGTCGGAGAACCTGACCGGCGGCATTGAGGTTCAGGCGATC
130 GTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
* * **
6322863 GGGGGGGCCGGGGGGGTGTGCGCATATGATGTGCGATGGGTGCTGGTACTTTATCCCTTATATTG
195 GGAGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC-TTGGCCCTTATATTG
*
6322928 GCCCTCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
258 GCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* *
6322993 GTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTAACAAAATC
323 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
* **
6323058 TTGTACACTTCGAGTTTTTAGTTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCGTGTC
388 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
* **
6323123 TACCAGGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCTGGAACCGTAAAAAGTTT
453 TACCAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTT
* *
6323188 CAAAAATCATGAAAAATAGAAAAGGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
518 CAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
6323253 CCATTGTATGAATTTACAAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTA
583 CCATTGTATGAATTTAC-AAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTA
* * * * *
6323318 AACCCACCTACCATCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTTTGGTCGGCATAGTGCTC
647 AACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCTC
* * * * *
6323383 GCCCGCCCGTCGCCCGCTCATTTCGTCAGTTGGCTTACGCATACAGAGTTCATTCCCAGTCTAAG
712 GCCCGCCCGCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* *
6323448 ATCAGACTGGACCAAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCC
777 ATCGGACTGGACCGAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCC
* * * * * *
6323513 TCGGCTTGTGCATCCCACCCTTTTGGCCAGTTGAG
842 CCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* * *
6323548 CGCCCGCACGTTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCAAAGATCGGA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * * * * *
6323613 -CGGTGCCGAGGGTTACGAC-CCACGTGCTGGGCTCGGGCATGTGCTGGTGCCACCTTTTTCTTC
66 TCGG-GCCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
** * * * *
6323676 ACCGGGGCACCATCACCGGAGCATCGTCGGAGAACCTGACCGATGCCATTGGTGTTCCGACGATC
130 GTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC
* *
6323741 GGAGGGGCCAGGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACCTGGCCCTTATATTGG
195 GGAGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG
* * *
6323806 CCCCCTATCCCTTATCAAACCTTGAGAACTCACACCCCTTTAATGAGCATTTGAGATTTTACAGG
259 CCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
*
6323871 TTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
324 TTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * *
6323936 CGTACACTTCGAGTTTTTAGTTGAATTTTTTTGTGCATGCCAATAAAAATACAAGGATCACGTCT
389 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * * * *
6324001 ACCAAGTTTAGGGCCAAAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAATCGCAAAAAGTTTC
454 ACCAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTC
* * *
6324066 AAAAATCGTGAAAAATAG-AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAGGGGGC
519 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
* * ** * *
6324130 CATTGTATGAATTTACAATCTATAAAAATGGCATTGGTGCACAAAAATATGAAGATGTGCCTAAA
584 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAA
* * * **
6324195 CCCACCTACCACCCTATCGGTCCA-CGCTTGCGCATCCTGTCTCTCTGGCC-G-GT-GTAAT-GC
649 CCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCTCGC
* * * * *
6324255 CCACCCGCTTGCCCGCTCGTTT-GTCAGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAGGA
714 CCGCCCGC-CGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * * * * ** * * *
6324319 TTGGA-TCAGACCGAGGGTTACGATAGCAAGATCGGA-AAAACGGAAAGGGGGACCCGACGGATC
778 TCGGACT-GGACCGAGGGTTGCGGTAGCAGGATC-GACAGCACGCAGAGGGGGACCCGACCGATC
* * **
6324382 CCCGACTTGTGCATCCTGCCCCTCTGGCCGGCTGAG
841 CCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* * *
6324418 CACCCACACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG-AT-C-
*
6324483 GAGTTCATTCCCAGTCTAAGATTGGATCGGACAGAGGGTTGCGGCAGCACATGCTAGGCTCGGGC
63 G-G---------A-TC---G---GG--C---C-GAGGGTTGCGGCAGCACATGCTGGGCTCGGGC
* * * *
6324548 ATGTGCTGGTGTCGCATTTTTCTTTGTCGGGGCACCATTGCCAGAGCATCGTCGGAGAACCTGAC
105 ATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGAC
* ** * * * * *
6324613 TGGTGGCATTGGGGTTCTGACAATTGAAGGGGGCCGGGGGGGCGGGTGTGCGCATATGATGTGCG
170 CGACGGCATTGGGGTTCCGACGATCGGA-GGGGCC----GGG-GGGTGTGCGCACATGATGTGCG
*
6324678 ATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAC
229 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACAC
* * * * * *
6324743 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCGAATTGCCATTGACAGTTTCCGAAATG
294 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT-AAAGTGTCTGAAATG
* * *
6324808 GGGACACTTTTTTTCAAATGGTTCACAAATTCTTTTACACTTCAAGTTTTTTAGCTGAATTTTTT
358 GGGACAC-TTTTTTCAAATGG-TCACAAAATCTTGTACACTTCGAG-TTTTTAGCTGAATTTTTT
* * * *
6324873 TGTGCATGCCAAAAAAAAATACAAGGGATCATGTCTACCAAGGTTTGGGGGCCAAAACCTCATTT
420 TGTGCATGCC-AACAAAAATACAA-GGATCACGTCTACCAA-GTTT-GGGGCCAAAA-ATCCTTT
* * * ** *
6324938 TG-AAAAA-CTTAAAAAACACTCCGAACCACAAAAAGTTTAAGAAAATCATTGAAAAATAGAAAA
480 CGAAAAAATTTTAAAAAA-TC-CCGAACCGTAAAAAGTTTCA-AAAATCA-TGAAAAATAGAAAA
* * *
6325001 CGAGT--TCTTGGCCATCCAAAACTTCACTTGAAGGCTTAAGGGACCATTGTATTAATTTACAAG
541 CGAGTCGTCTT-GCCAT--GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
*
6325064 CCATAAAAATAGGCATTGGCACGTAGAAATATGAAGATGTGCCCTAAACCCCACCTATCCACCCT
603 CCATAAAAAT-GGCATTGGCACGCAGAAATATGAAGATGTG-CCTAAA-CCCACCTA-CCACCCT
* *
6325129 ATCGATCCATGGCTTGCGCATTCCGTCTCATCCCTGGCCGACGTAGTGC-CGCCC-CTCCGCCG-
664 ATCGATCCATGGCTTGCGCATCCCGTCTC-T--CTGGCCGGCGTAGTGCTCGCCCGC-CCGCCGC
* * * * **
6325191 -CGGTCGTTTCATCGGTTGGCTTAGGCATGACCGGAGTTCAGTCCCAGTCTAAGATCAGACCAGA
725 CCGCTCGTTTCGTCGGTTGGCTTAGGCAT-A-CGGAGTTCATTCCCAGTCTAAGATCGGACTGGA
* * * * ** * * *
6325255 CCGAGAGTTGCAGTAGCAAGATCTG-CAGCACGTAGAGGTTGACCCGGCCGATCCCCAGCTTGCA
788 CCGAGGGTTGCGGTAGCAGGATC-GACAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCG
** * *
6325319 CATCCTGCCCC-CTGGCTGACTGAG
852 CATCCCACCCCTCTGGCCGGCTGAG
* * **
6325343 CGCCCGTACGCTCATTTCGTGTTTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T---C-TA--
*
6325408 GAGTTCATTCCCAGTCTATGATCAGATCGGCCGAGGGTTGCGGCAGCACATGCTAGGCGT-GGGC
58 -AG---A-T--C-G-----GATC-G---GGCCGAGGGTTGCGGCAGCACATGCTGGGC-TCGGGC
* * ** * * *
6325472 ATGTGCTAGTGCTGCATTTTTCTTCACCGGGGCGCCATCGTCGAAGCATCGTCGGAGAACCTGAC
105 ATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGAC
*
6325537 CGACGGCATTGGGGTTCC-AGCGATCGGGGGGGCCGGGGTGGTGTGCGCACATGATGTGCGATGG
170 CGACGGCATTGGGGTTCCGA-CGATCGGAGGGGCCGGGG-GGTGTGCGCACATGATGTGCGATGG
** *
6325601 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCACACCCCA
233 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCC
* * * *
6325666 TTAGAGATCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAA------GAAATAGGGAC
298 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
* * * * *
6325725 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTGGCTGACTTTTTTTATACATG
363 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
** *
6325790 CCAACAAAAATACAAGGATCGTGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTA
428 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTA
* * * *
6325855 AAAAATCCCAAACCGCAAGAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCTTGCCATG
493 AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
* *
6325920 AAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCCTAAAAATGGCATTGGCA
558 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * * * * * *
6325985 CACAGAAATATGAAGATGTACCTAAACCCGCCTACCACCATATCGATCCACGACTTGCGCCTCCC
623 CGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCC
* * * * *
6326050 GTCTCTGTGGCTGGCGTAGTGCCCGCCAG--C-CCGCCCGCTCATTTCGTCGGTTGGCTTAGGCA
688 GTCTCTCTGGCCGGCGTAGTGCTCGCCCGCCCGCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
* * * * * * *
6326112 TACGGAGTTCATTCGCAGTCAAAGATGGGA-TCGGATCGAGGGTTGTGGCAGTAGGATCGACAGC
753 TACGGAGTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTTGCGGTAGCAGGATCGACAGC
* * * * * *
6326176 ACGTAGAGGGGGACCCGATCTATCCCCGGCTTACACATCCCACCCCTCTGGCTGGCTGAG
817 ACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* * *
6326236 CTCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCGTACGGAGCTCATTCCCAGTCTATGCATACG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG----T-C-TA--
* * * *
6326301 GAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGTAACACATGCTGGGCTCAGGC
58 -AG---A-T--C-G-----GATCGG----G-CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGC
* ** * *
6326366 ATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGAAGAACCTAAC
105 ATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGAC
** * * * * * * *
6326431 CGGTGGCATTGGTGTTCCGGCGATTGG-GGGGTCCGGGGGGCTGTCCACACAGGATGTTCGATGG
170 CGACGGCATTGGGGTTCCGACGATCGGAGGGG-CCGGGGGG-TGTGCGCACATGATGTGCGATGG
* * **
6326495 GTGCTGGTACATGGCCCTTATATTGGCCCCCTGTCCCTCATCAAACCTCCAGAACTCACA-CCCC
233 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCC
*
6326559 TTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
298 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
*
6326624 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATG
363 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * *
6326689 CCAAAAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCGCAAAACT-CTTTCCAAAAAAATTT
428 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC-CAAAAATCCTTT-CGAAAAAATTT
* ** ** * *
6326752 AAAAAAATCTTGAACC-TCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTACC
491 TAAAAAATCCCGAACCGT-AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* * * *
6326816 ATGAAACTTCACGAGAAGGCTTAAAGGACTATTGTATGAATTTAAAAGCCATAAAAATGGCATTG
555 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * * * * * *
6326881 GAATGAAAAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATTCACGACTTGCGCAT
620 GCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCAT
* *
6326946 CCCGTCTCTCTGGCCGGTGTAGT--T--CCCG--C-CCGCCCGCTCGTTTCGTGGGTTGGCTTAG
685 CCCGTCTCTCTGGCCGGCGTAGTGCTCGCCCGCCCGCCGCCCGCTCGTTTCGTCGGTTGGCTTAG
** * * **
6327004 GCATGTGGAGTTCATTCCCAGTCTAAGATCGGACTGGATCGAGGGTTGTGGTAGCAGGATCGGTA
750 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGTAGCAGGATCGACA
* ** * * * * *
6327069 GCATGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCTCATCTCGCCCCTCTGGCCGGTTGAA
815 GCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* **
6327131 TGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAAA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * * * *
6327196 CCAGACCAAGGCTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
66 TCGGGCCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* * * * * * **
6327261 TCAGGGTACCATCGTCGGAGCATCGCCGGAGAACCTGATCGGCGGCATTGGGGTTCCGGGGATC-
131 TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG
*
6327325 GA-------GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAAATTGGCC
196 GAGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* * *
6327383 CCCTATCCCTCATCAAACCTCGAGAACTCA-AACCCCTTAAAGAGCATTTGAGAAATTTAACAGG
261 CCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAG--ATTTTACAGG
*
6327447 TTTGCCTG-CAGTAGCCAATTAAAGTG-ATGAAATGGGGACGA-TTTTTTCAAAATGGTCACAAA
324 TTTG-CTGCCAGTAGCC-ATTAAAGTGTCTGAAATGGGGAC-ACTTTTTTC-AAATGGTCACAAA
* *
6327509 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTCTTTGTGCAATCCCAA-AAAAATACAAGGATCA
385 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC-ATGCCAACAAAAATACAAGGATCA
* * * * ** *
6327573 CGTCTACCAAGTATGGGACCCCAAAACCCCATC-AAGCAACAATTTTTCAAAAAT-CCGAAACCG
449 CGTCTACCAAGTTTGGG-GCCAAAAATCCTTTCGAA--AA-AA-TTTTAAAAAATCCCG-AACCG
* * *
6327636 TAAAAAGTTTTGGAAAAATCATCGAAAAATAGAAAACGAGTCTTCTTGGCCATGAAACTTCAGTG
508 TAAAAAG-TTT-CAAAAATCAT-GAAAAATAGAAAACGAGTCGTCTT-GCCATGAAACTTCA-CG
* *
6327701 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATA
568 TGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATA
*
6327766 TGAAGATGTGCCTAAACCCACCTTCCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGG
633 TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGG
* * * *
6327831 CCGACGTAGTGCCCGTCCGCTCCACCCGCCCGCCCACCCTCCCGCTCGTTTCATCGATTGGCTTA
698 CCGGCGTAGTG--C-T-CG-----CCCGCCCG-----CCGCCCGCTCGTTTCGTCGGTTGGCTTA
* ** * * * *
6327896 GGCATACGGAGTTCATTCCCAGTGTAAGATCAAACCGGACCAAGGGTTGTGGTAGCA-GATCGGC
749 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGTAGCAGGATCGAC
* ** ** ** * * *
6327960 AGCACGCAGAGGGCGATACGGTCGATCCTTGGCTTGCGCATCCTACCCCTCTGGCCGACTTAG
814 AGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCGGCTGAG
* * * * *
6328023 CGGCCGCATGTTCTTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTGTAAGCATATG
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCA--GT---C-TA--
* * *
6328088 GAGTTCATTCCCAGTCTAAGATCGAACTGGACCAAGGGTTGCGGCAGCACATGCTAGGCTCGAGC
58 -AG---A-T--C-G-----GATCG----GG-CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGC
* ***
6328153 ATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCAT---C--A--A----CGGAGAACCTTTT
105 ATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGAC
* *
6328207 C-AGTGGCATTGGGGTTCCG--G--C-GA----ACGGGGGGTGTGCGCACATGATGTGCGATGGG
170 CGA-CGGCATTGGGGTTCCGACGATCGGAGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGG
* * * * * *
6328262 TGCTGGTACTTGGCCCTTATATTGGCCCCTTATTCGTCTTCAAATCTT-AAAACTCACA-CCCCT
234 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCT
* * *
6328325 TAAAGAGCTTTTGAGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGGAATGGGGACA
299 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * * *
6328390 CCTTTTTAAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTACATGC
364 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
* * **
6328455 CAA-AAAAATACAAGGATCACGTCTACCAAGTTCGGGGCCAAAACA-CC-TTCCAAAAAAAATTA
429 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-ATCCTTTCGAAAAAATTTTA
** * *
6328517 AAAAATCCCGATTCATAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATG
493 AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
*
6328582 AAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
558 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * **
6328647 CAACAGAAATATGAAGATGTGCCTAAACCCACCTACCAACCTATCGATCCATGGCTTGTTCATCC
623 C-GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCC
* ** * * ** *
6328712 CGTTTCTCTAACCGACGTAGTGCCCCACAGCCCGCCCGCCGCGCCGCATCG-TTCGTCACTTCGC
687 CGTCTCTCTGGCCGGCGTAGTG---CTC-GCCCGCCCGCCGC-CCGC-TCGTTTCGTCGGTTGGC
* * * * *
6328776 TTAGAGCATACTAGAGTTCA-T--CAGTCTAAAGATGGGA-TCAGACCGAGGG-TGTGGTAGTAG
746 TTAG-GCATAC-GGAGTTCATTCCCAGTCT-AAGATCGGACT-GGACCGAGGGTTGCGGTAGCAG
* * * * *
6328836 GATCGACAGCAACGCACAAGGGGGGACTTTCTG-TCGATACCCCCGCTTGGCGCAT-CCGCCCCT
807 GATCGACAGC-ACGCA-GA-GGGGGAC---CCGACCGAT-CCCCGGCTT-GCGCATCCCACCCCT
6328899 CT-GCC-GCTGAG
864 CTGGCCGGCTGAG
*
6328910 CGCCCGC-CG-TCG-TT-GTAGGTTGACTTA-GCATACGGAGTTCATT-CCAGTCTAAGATCGGA
1 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
* * *
6328969 TCGGACCGAGGGTTGTGGC-GTCAACATGCTAGGCT-GGGCATGTGCTGGTGCCGGCATTTTT-T
66 TCGGGCCGAGGGTTGCGGCAG-C-ACATGCTGGGCTCGGGCATGTGCTGGTGCC-GCATTTTTCT
* * * * * * *
6329031 TCG-CGCGGTGCACC-TCACCGGATCATCGTCGGATAAGCTTGACCGACGACATTGGAGTTCCGG
128 TCGTCG-GG-GCACCATCGCCGGAGCATCGTCGGAGAA-CCTGACCGACGGCATTGGGGTTCCGA
* *
6329094 CTGATCGG-GGGG-TGGGGGGTGGTGGCGCACATGATGGTGCAAT-GG-G-T--TACTTGGCCCT
190 C-GATCGGAGGGGCCGGGGGGT-GT-GCGCACATGAT-GTGCGATGGGTGCTGGTACTTGGCCCT
* * *
6329152 TATATTGGCCCCCTATTCCCTCATACCAACATCGAGAACTCACACCCCCTTAAAGAGCATTTGAG
251 TATATTGGCCCCCTA-TCCCTCAT-CAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAG
* * * * * *
6329217 AATTTATAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTGGAATGGGGACACCTTTTTCAAATTGT
314 ATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGT
*
6329282 CACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT-TGCATGCCAACAAAAATATAAG
379 CACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAG
* *
6329346 GATCACGTCTACCAAGTTTGGGGCCAAAACAT-CTTCCAAAAAAATTTTAAAAAATCCCGAACCG
444 GATCACGTCTACCAAGTTTGGGGCCAAAA-ATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCG
** * * *
6329410 TAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACATCACGTTAAG
508 TAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
** * *
6329475 GCTTAAAAGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGTAATATGAAG
573 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAG
* * * * *
6329540 ATGTGCCTAAACCCTCCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTTTGGTCGAC
638 ATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGC
* * * *
6329605 GTAGAGCCCGCCCGCCCGCCCGCCCGTTCGTTTCGTCGGTTGGCTTAGGCATACGTAGTTCATTC
703 GTAGTGCTCGCCCGCCCG-CCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
* *
6329670 CCAGTCTAAGATCGGACCGAACCGAGGGTTG
767 CCAGTCTAAGATCGGACTGGACCGAGGGTTG
6329701 TGGCAGCACA
Statistics
Matches: 5970, Mismatches: 775, Indels: 566
0.82 0.11 0.08
Matches are distributed among these distances:
854 3 0.00
855 35 0.01
856 26 0.00
858 1 0.00
859 1 0.00
860 99 0.02
861 5 0.00
862 40 0.01
863 95 0.02
864 13 0.00
865 12 0.00
866 179 0.03
867 70 0.01
868 246 0.04
869 297 0.05
870 308 0.05
871 37 0.01
872 146 0.02
873 70 0.01
874 45 0.01
875 79 0.01
876 81 0.01
877 521 0.09
878 274 0.05
879 106 0.02
880 1 0.00
881 3 0.00
882 33 0.01
883 54 0.01
884 17 0.00
885 15 0.00
886 8 0.00
887 19 0.00
888 9 0.00
889 18 0.00
890 8 0.00
891 59 0.01
892 279 0.05
893 243 0.04
894 234 0.04
895 195 0.03
896 29 0.00
897 129 0.02
898 24 0.00
899 311 0.05
900 36 0.01
901 94 0.02
902 206 0.03
903 70 0.01
904 39 0.01
905 64 0.01
906 110 0.02
907 55 0.01
908 27 0.00
909 36 0.01
910 35 0.01
911 37 0.01
912 22 0.00
913 18 0.00
914 8 0.00
915 50 0.01
916 25 0.00
917 7 0.00
918 77 0.01
919 142 0.02
920 16 0.00
921 1 0.00
923 21 0.00
924 118 0.02
925 64 0.01
926 93 0.02
927 1 0.00
928 1 0.00
930 7 0.00
931 2 0.00
932 2 0.00
933 1 0.00
934 2 0.00
936 2 0.00
937 1 0.00
938 2 0.00
942 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (876 bp):
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
TCGGGCCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
TCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCG
GAGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
CCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
CAAGTTTGGGGCCAAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAA
AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACC
CACCTACCACCCTATCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCTCGCCC
GCCCGCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG
GACTGGACCGAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGG
CTTGCGCATCCCACCCCTCTGGCCGGCTGAG
Found at i:6324486 original size:26 final size:26
Alignment explanation
Indices: 6324450--6324502 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6324440 GTTGACTTAG
6324450 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
6324476 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6324502 G
1 G
6324503 ATTGGATCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6325404 original size:26 final size:26
Alignment explanation
Indices: 6325375--6325425 Score: 102
Period size: 26 Copynumber: 2.0 Consensus size: 26
6325365 TTTGACTTAG
6325375 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6325401 GCATACGGAGTTCATTCCCAGTCTA
1 GCATACGGAGTTCATTCCCAGTCTA
6325426 TGATCAGATC
Statistics
Matches: 25, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.27, G:0.20, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6326856 original size:899 final size:896
Alignment explanation
Indices: 6323580--6329708 Score: 6531
Period size: 899 Copynumber: 6.9 Consensus size: 896
6323570 GTTGACTTAG
* * * * * * *
6323580 GCATACGGAGTTCATTCCCAGTCAAAGATCGGA-CGGTGCCGAGGGTTACGAC-CCACGTGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGG-ACCGAGGGTTGCGGCAGCACATGCTAG
** * ** *
6323643 GCTCGGGCATGTGCTGGTGCCACCTTTTTCTTCACCGGGGCACCATCACCGGAGCATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* * * * *
6323708 AACCTGACCGATGCCATTGGTGTTCCGACGATCGGAGGGGCCAGGGGGGTGTGCACACATGATGT
130 AACCTGACCGGTGGCATTGGGGTTCCGGCGATCGG-GGGGCC-GGGGGGTGTGCGCACATGATGT
* * *
6323773 GCGATGGGTGCTGGTACCTGGCCCTTATATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
6323838 CACCCCTTTAATGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
258 CACCCC-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
6323903 TGGGGACACTTTTTTCAAATGGTCACAAAATCTCGTACACTTCGAGTTTTTAGTTGAATTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * *
6323968 GTGCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTTAGGGCCAAAACTCCTTTCGAAAA
387 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* * * * *
6324033 AATTTTAAAAAATCTCGAATCGCAAAAAGTTTCAAAAATCGTGAAAAATAG-AAACGAGTCGTCT
452 AATTTTAAAAAATCCCGAACCTCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * * *
6324097 TGCCATGAAACTTCACGTGAAGGCTTAGGGGGCCATTGTATGAATTTACAATCTATAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
** * *
6324162 ATTGGTGCACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGGTCCAC-GCTTGC
582 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* ** * * ** *
6324226 GCATCCTGTCTCTCTGGCCGGTGTAATGCCCACCCGCTTGCCCGCTCGTTT-GTCAGTTGGCTTA
647 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * * * ** * *
6324290 GGCATACAGAGTTCATTCCCAGTCTAGGATTGGATCAGACCGAGGGTTACGATAGCAAGATCGGA
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCAGGATC-GA
** * * * * * *
6324355 -AAAACGGAAAGGGGGACCC-GACGGATCCCCGACTTGTGCATCCTGCCCCTCTGGCCGGCTGAG
776 CAGCACGCAGAGGGGGACCCGGTC-GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
* *
6324418 CACCCACACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
840 CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC-GAGTTCATTCCCAGTCTAA
* * *
6324476 GCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACAGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGG
* * *
6324541 CTCGGGCATGTGCTGGTG-TCGCATTTTTCTTTGTCGGGGCACCATTGCCAGAGCATCGTCGGAG
66 CTCGGGCATGTGCTGGTGCT-GCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
* * * * * *
6324605 AACCTGACTGGTGGCATTGGGGTTCTGACAATTGAAGGGGGCCGGGGGGGCGGGTGTGCGCATAT
130 AACCTGACCGGTGGCATTGGGGTTCCGGCGATCG--GGGGGCC----GGG-GGGTGTGCGCACAT
* *
6324670 GATGTGCGATGGGTGCTGGTACTTGGCCTTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGA
188 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGA
* * * * *
6324735 ACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCGAATTGCCATTGACAGTTT
253 ACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT-AAAGTGT
* * * *
6324800 CCGAAATGGGGACACTTTTTTTCAAATGGTTCACAAATTCTTTTACACTTCAAGTTTTTTAGCTG
316 CTGAAATGGGGACAC-TTTTTTCAAATGG-TCACAAAATCTTGTACACTTCGAG-TTTTTAGCTG
*
6324865 AATTTTTTTGTGCATGCCAAAAAAAAATACAAGGGATCATGTCTACCAAGGTTTGGGGGCCAAAA
378 AATTTTTTTGTGCATGCC-AAAAAAAATACAA-GGATCACGTCTACCAA-GTTT-GGGGCCAAAA
* *** * * * *
6324930 CCTCATT-TTGAAAAA-CTTAAAAAACACTCCGAACCACAAAAAGTTTAAGAAAATCATTGAAAA
439 -CTCCTTCCAAAAAAATTTTAAAAAA-TC-CCGAACCTCAAAAAGTTT-CGAAAATCA-TGAAAA
* * *
6324993 ATAGAAAACGAGT--TCTTGGCCATCCAAAACTTCACTTGAAGGCTTAAGGGACCATTGTATTAA
499 ATAGAAAACGAGTCGTCTT-GCCAT--GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAA
**
6325056 TTTACAAGCCATAAAAATAGGCATTGGCACGTAGAAATATGAAGATGTGCCCTAAACCCCACCTA
561 TTTACAAGCCATAAAAAT-GGCATTGGCACACAGAAATATGAAGATGTG-CCTAAA-CCCACCTA
* *
6325121 TCCACCCTATCGATCCATGGCTTGCGCATTCCGTCTCATCCCTGGCCGACGTAGTG-CCGCCC-C
623 -CCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC-T--CTGGCCGACGTAGTGCCCGCCCGC
* * * *
6325184 TCCGCCGCGGTCGTTTCATCGGTTGGCTTAGGCATGACCGGAGTTCAGTCCCAGTCTAAGATCAG
684 -CCGCC-CGCTCGTTTCGTCGGTTGGCTTAGGCAT-A-CGGAGTTCATTCCCAGTCTAAGATCGG
* * ** * * ** * *
6325249 ACCAGACCGAGAGTTGCAGTAGCAAGATCTG-CAGCACGTAGAGGTTGACCCGGCCGATCCCCAG
745 ACCGGACCGAGGGTTGTGGTAGCAGGATC-GACAGCACGCAGAGGGGGACCCGGTCGATCCCCGG
* * * * * * **
6325313 CTTGCACATCCTGCCCC-CTGGCTGACTGAGCGCCCGTACGCTCATTTCGTGTTTTGACTTAGGC
809 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
6325377 ATACGGAGTTCATTCCCAGTCTAA
874 ATAC-GAGTTCATTCCCAGTCTAA
* * *
6325401 GCATACGGAGTTCATTCCCAGTCTATGATCAGATCGG-CCGAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGG
* ** * * *
6325465 CGT-GGGCATGTGCTAGTGCTGCATTTTTCTTCACCGGGGCGCCATCGTCGAAGCATCGTCGGAG
66 C-TCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAG
** *
6325529 AACCTGACCGACGGCATTGGGGTTCCAGCGATCGGGGGGGCCGGGGTGGTGTGCGCACATGATGT
130 AACCTGACCGGTGGCATTGGGGTTCCGGCGATC-GGGGGGCCGGGG-GGTGTGCGCACATGATGT
*
6325594 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCCAGAACTCA
193 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
6325659 CACCCCATTAGAGATCATTTGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAA------GAAA
258 CACCCC-TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * * *
6325718 TAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTGGAGTTTTTGGCTGACTTTTTTT
322 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * ** * *
6325783 ATACATGCCAACAAAAATACAAGGATCGTGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAA
387 GTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAA
* * * * *
6325848 AATTTTAAAAAATCCCAAACCGCAAGAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGTCT
452 AATTTTAAAAAATCCCGAACCTCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCT
* *
6325913 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTACAAGCCCTAAAAATGGC
517 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * *
6325978 ATTGGCACACAGAAATATGAAGATGTACCTAAACCCGCCTACCACCATATCGATCCACGACTTGC
582 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * *
6326043 GCCTCCCGTCTCTGTGGCTGGCGTAGTGCCCGCCAGCCCGCCCGCTCATTTCGTCGGTTGGCTTA
647 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
* * * * * * *
6326108 GGCATACGGAGTTCATTCGCAGTCAAAGATGGGATCGGATCGAGGGTTGTGGCAGTAGGATCGAC
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCAGGATCGAC
* * * * * * * *
6326173 AGCACGTAGAGGGGGACCCGATCTATCCCCGGCTTACACATCCCACCCCTCTGGCTGGCTGAGCT
777 AGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * *
6326238 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCGTACGGAGCTCATTCCCAGTCTAT
842 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC-GAGTTCATTCCCAGTCTAA
* * * * *
6326294 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGTAACACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGG
* ** *
6326359 CTCAGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCACCGAAGA
66 CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * * * * *
6326424 ACCTAACCGGTGGCATTGGTGTTCCGGCGATTGGGGGGTCCGGGGGGCTGTCCACACAGGATGTT
131 ACCTGACCGGTGGCATTGGGGTTCCGGCGATCGGGGGG-CCGGGGGG-TGTGCGCACATGATGTG
* * *
6326489 CGATGGGTGCTGGTACATGGCCCTTATATTGGCCCCCTGTCCCTCATCAAACCTCCAGAACTCAC
194 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
*
6326554 ACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATG
259 ACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
6326619 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGT
324 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
*
6326684 GCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTT-GGGCGCAAAACTCTTTCCAAAAAA
389 GCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGC-CAAAACTCCTTCCAAAAAA
* ** * *
6326748 ATTTAAAAAAATCTTGAACCTCAAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
453 ATTTTAAAAAATCCCGAACCTCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* * * * *
6326813 ACCATGAAACTTCACGAGAAGGCTTAAAGGACTATTGTATGAATTTAAAAGCCATAAAAATGGCA
518 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* * * * * *
6326878 TTGGAATGA-AAAAATATGAAGATGTGCCTAAACCCACCTGCCACCCTATCGATTCACGACTTGC
583 TTGGCA-CACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
** * *
6326942 GCATCCCGTCTCTCTGGCCGGTGTAGT----TCCCGCCCGCCCGCTCGTTTCGTGGGTTGGCTTA
647 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
** * * **
6327003 GGCATGTGGAGTTCATTCCCAGTCTAAGATCGGACTGGATCGAGGGTTGTGGTAGCAGGATCGGT
712 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCAGGATCGAC
* * * * **
6327068 AGCATGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCTCATCTCGCCCCTCTGGCCGGTTGAATG
777 AGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCG
6327133 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
842 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATAC-GAGTTCATTCCCAGTCTAA
* * *
6327189 G-AT-C--A----A-----A--C------C--A---GACCAAGGCTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGG
* * * * *
6327228 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCAGGGTACCATCGTCGGAGCATCGCCGGAGA
66 CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
* * * *
6327293 ACCTGATCGGCGGCATTGGGGTTCCGGGGATC-----G--AGGGGGTGTGCGCACATGATGTGCG
131 ACCTGACCGGTGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* *
6327351 ATGGGTGCTGGTACTTGGCCCTTAAATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAAAC
196 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
6327416 CCCTTAAAGAGCATTTGAGAAATTTAACAGGTTTGCCTG-CAGTAGCCAATTAAAGTG-ATGAAA
261 CCCTTAAAGAGCATTTGAG--ATTTTACAGGTTTG-CTGCCAGTAGCC-ATTAAAGTGTCTGAAA
*
6327479 TGGGGACGA-TTTTTTCAAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTCT
322 TGGGGAC-ACTTTTTTC-AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
6327543 TTGTGCAAT-CCCAAAAAAATACAAGGATCACGTCTACCAAGTATGGGACCCCAAAACCCCAT-C
385 TTGTGC-ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGG--GCCAAAACTCCTTCC
* * *
6327606 AAGCAACAATTTTTCAAAAAT-CCGAAACCGT-AAAAAGTTTTGGAAAAATCATCGAAAAATAGA
447 AA--AA-AAATTTTAAAAAATCCCG-AACC-TCAAAAAG-TTTCG-AAAATCAT-GAAAAATAGA
* *
6327669 AAACGAGTCTTCTTGGCCATGAAACTTCAGTGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
504 AAACGAGTCGTCTT-GCCATGAAACTTCA-CGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
** * *
6327734 AGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTTCCACCCTAT
567 AGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
*
6327799 CGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGTCCGCTCCACCCGCCCGC
632 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTG--C--CCG-----CCCGCCCG-
* * * **
6327864 CCACCCTCCCGCTCGTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTGTAAGATCAA
687 -------CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * ** **
6327929 ACCGGACCAAGGGTTGTGGTAGCA-GATCGGCAGCACGCAGAGGGCGATACGGTCGATCCTTGGC
745 ACCGGACCGAGGGTTGTGGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGGTCGATCCCCGGC
** * * * * * *
6327993 TTGCGCATCCTACCCCTCTGGCCGACTTAGCGGCCGCATGTTCTTTTCGTGGGTTGACTTAGGCA
810 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
*
6328058 TACAGAGTTCATTCCCAGTGTAA
875 TAC-GAGTTCATTCCCAGTCTAA
* * * *
6328081 GCATATGGAGTTCATTCCCAGTCTAAGATCGAACTGGACCAAGGGTTGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGG
*
6328146 CTCGAGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCAT---C--A--A----CGGAGA
66 CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
*** * *
6328200 ACCTTTTCAGTGGCATTGGGGTTCCGGCGA--------ACGGGGGGTGTGCGCACATGATGTGCG
131 ACCTGACCGGTGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
* * * * * * *
6328257 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATTCGTCTTCAAATCT-TAAAACTCACAC
196 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* * *
6328321 CCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGATGCCAGTAGCCATTAAAGTGTCTGGAATGGG
261 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* * * *
6328386 GACACCTTTTTAAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTAC
326 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
* * *
6328451 ATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTCGGGGCCAAAACACCTTCCAAAAAAA-A
391 ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATT
* * * *
6328514 TTAAAAAATCCCGATTCAT-AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGC
456 TTAAAAAATCCCGA-ACCTCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGC
*
6328578 CATGAAACTTCACATGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
520 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATT
* * **
6328643 GGCACAACAGAAATATGAAGATGTGCCTAAACCCACCTACCAACCTATCGATCCATGGCTTGTTC
585 GGCAC-ACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* ** **
6328708 ATCCCGTTTCTCTAACCGACGTAGTGCCCCACAGCCCGCCCGCCGCGC-CGCATCGTTCGTCACT
649 ATCCCGTCTCTCTGGCCGACGTAGTG--CC-C-GCCCGCCCGCC-CGCTCG--T--TTCGTCGGT
* * * * *
6328772 TCGCTTAGAGCATACTAGAGTTCA-T--CAGTCTAAAGATGGGATCAGACCGAGGG-TGTGGTAG
705 TGGCTTAG-GCATAC-GGAGTTCATTCCCAGTCT-AAGATCGGACCGGACCGAGGGTTGTGGTAG
* * * * *
6328833 TAGGATCGACAGCAACGCACAAGGGGGGACTTTCTGTCGATACCCCCGCTTGGCGCAT-CCGCCC
767 CAGGATCGACAGC-ACGCA-GA-GGGGGAC--CCGGTCGAT-CCCCGGCTT-GCGCATCCCGCCC
*
6328897 CTCT-GCC-GCTGAGCG--C-C-CGC-CG--TC-------G--TT--G--TA-G-GTTGA----C
825 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGAGTTCATTCCC
6328934 --T-T-A
890 AGTCTAA
* *
6328937 GCATACGGAGTTCATT-CCAGTCTAAGATCGGATCGGACCGAGGGTTGTGGC-GTCAACATGCTA
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAG-C-ACATGCTA
* * *
6329000 GGCT-GGGCATGTGCTGGTGCCGGCATTTTT-TTCG-CGCGGTGCACC-TCACCGGATCATCGTC
64 GGCTCGGGCATGTGCTGGTG-CTGCATTTTTCTTCGTCG-GG-GCACCATCGCCGGAGCATCGTC
* * ** * * *
6329061 GGATAAGCTTGACCGACGACATTGGAGTTCCGGCTGATCGGGGGG-TGGGGGGTGGTGGCGCACA
126 GGAGAA-CCTGACCGGTGGCATTGGGGTTCCGGC-GATCGGGGGGCCGGGGGGT-GT-GCGCACA
* * *
6329125 TGATGGTGCAAT-GG-G-T--TACTTGGCCCTTATATTGGCCCCCTATTCCCTCATACCAACATC
187 TGAT-GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA-TCCCTCAT-CAAACCTC
* * *
6329185 GAGAACTCACACCCCCTTAAAGAGCATTTGAGAATTTATAGGTTTGCTGCCAGTGGCCATTAAAG
249 GAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
* * *
6329250 TGTCTGGAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
313 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG
* *
6329315 AATTTTTTT-TGCATGCCAACAAAAATATAAGGATCACGTCTACCAAGTTTGGGGCCAAAACAT-
378 AATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-TC
*
6329378 CTTCCAAAAAAATTTTAAAAAATCCCGAACCGT-AAAAAGTTTTGAAAATCATGAAAAATAGAAA
442 CTTCCAAAAAAATTTTAAAAAATCCCGAACC-TCAAAAAGTTTCGAAAATCATGAAAAATAGAAA
* * * **
6329442 ACGAGTCATCTTGCCATGAAACATCACGTTAAGGCTTAAAAGACCATTGTATGAATTTACAAGCC
506 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
** * *
6329507 ATAAAAATGGCATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCTATCGAT
571 ATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
* * *
6329572 CCACGGCTTGCGCATCCCGTCTCTTTGGTCGACGTAGAGCCCGCCCGCCCGCCCGCCCGTTCGTT
636 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCG--C--TCGTT
* *
6329637 TCGTCGGTTGGCTTAGGCATACGTAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGT
697 TCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGT
*
6329702 GGCAGCA
762 GGTAGCA
6329709 CATGCTGGGC
Statistics
Matches: 4433, Mismatches: 591, Indels: 440
0.81 0.11 0.08
Matches are distributed among these distances:
854 3 0.00
855 52 0.01
856 42 0.01
857 1 0.00
858 2 0.00
860 96 0.02
861 5 0.00
862 40 0.01
863 97 0.02
864 12 0.00
865 9 0.00
866 10 0.00
867 41 0.01
868 7 0.00
869 116 0.03
870 23 0.01
871 21 0.00
872 137 0.03
873 68 0.02
874 22 0.00
875 15 0.00
876 19 0.00
877 261 0.06
878 126 0.03
879 4 0.00
880 6 0.00
881 1 0.00
882 16 0.00
883 38 0.01
884 13 0.00
885 17 0.00
886 5 0.00
887 15 0.00
888 10 0.00
889 14 0.00
890 7 0.00
891 58 0.01
892 284 0.06
893 246 0.06
894 235 0.05
895 203 0.05
896 61 0.01
897 130 0.03
898 19 0.00
899 325 0.07
900 32 0.01
901 89 0.02
902 204 0.05
903 71 0.02
904 36 0.01
905 64 0.01
906 109 0.02
907 59 0.01
908 27 0.01
909 36 0.01
910 35 0.01
911 34 0.01
912 22 0.00
913 17 0.00
914 8 0.00
915 51 0.01
916 25 0.01
917 6 0.00
918 83 0.02
919 138 0.03
920 16 0.00
921 2 0.00
922 8 0.00
923 27 0.01
924 118 0.03
925 100 0.02
926 82 0.02
927 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (896 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGG
CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCGGAGA
ACCTGACCGGTGGCATTGGGGTTCCGGCGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCG
ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATT
TTAAAAAATCCCGAACCTCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
GCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
CCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGCAGGATCGACAGCA
CGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCG
CACGCTCGTTTCGTGGGTTGACTTAGGCATACGAGTTCATTCCCAGTCTAA
Found at i:6328084 original size:26 final size:26
Alignment explanation
Indices: 6328055--6328107 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6328045 GTTGACTTAG
*
6328055 GCATACAGAGTTCATTCCCAGTGTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
**
6328081 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6328107 G
1 G
6328108 ATCGAACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6330369 original size:717 final size:715
Alignment explanation
Indices: 6328933--6330416 Score: 2127
Period size: 717 Copynumber: 2.1 Consensus size: 715
6328923 TGTAGGTTGA
*
6328933 CTTA-GCATACGGAGTTCATT-CCAGTCTAAGATCGGATCGGACCGAGGGTTGTGGCGTCAACAT
1 CTTAGGCATAC-GAGTTCATTCCCAGTCTAAGATCGGA-CGAACCGAGGGTTGTGGCGTCAACAT
* * *
6328996 GCTAGGCTGGGCATGTGCTGGTGCCGGCATTTTTTTCGCGCGGTGCACCTCACCGGATCATCGTC
64 GCTAGGCTAGGCATGTGCTGGTGCCGGCATTTTTTTCGCGCGGTGCACCTCACCGGAGCATCGCC
* * * * *
6329061 GGATAAGCTTGACCGACGACATTGGAGTTCCGGCTGATCGGGGGGTGGGGGGTGGTGGCGCACAT
129 GGAGAAGCCTGACCGACGACATTGGAGTTCCGACTGATCGGAGGGTGGAGGGTGGTGGCGCACAT
*
6329126 GATGGTGCAATGGGTTACTTGGCCCTTATATTGGCCCCCTATTCCCTCATACCAACATCGAGAAC
194 GATGGTGCAATGGGTTACTTGGCCCTTATATTGGCCCCCTATTCCCTCATACAAACATCGAGAAC
* *
6329191 TCACACCCCCTTAAAGAGCATTTGAGAATTTATAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTG
259 TCACAACCCCTTAAAGAGCATTTGAGAATTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTG
*
6329256 GAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
324 GAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTT
* * * *
6329321 TTTTGCATGCCAACAAAAATATAAGGATCACGTCTACCAAGTTTGGGGCCAAAACATCTTCCAAA
389 TTTTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCAAAAACACCTTCCAAA
*
6329386 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCAT
454 AAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCAT
* * *
6329451 CTTGCCATGAAACATCACGTTAAGGCTTAAAAGACCATTGTATGAATTTACAAGCCATAAAAATG
519 CTTACCATGAAACATCACGTGAAGGCTTAAAAGACCATTGTATGAATTTACAAGCCAAAAAAATG
* * * *
6329516 GCATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCTATCGATCCACGGCTT
584 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGCTT
* * * * ** * * * *
6329581 GCGCATCCCGTCTCTTTGGTCGACGTAGAGCCCGCCCGCCCGCCCGCCCGTTCGTTTCGTCGGTT
649 GCGCATCCCGTCTCTCTGGCCGACGTAGAGCCAGCCCGCCCACCCGCCCACTCATTTCATCGATC
6329646 GG
714 GG
6329648 CTTAGGCATACGTAGTTCATTCCCAGTCTAAGATCGGACCGAACCGAGGGTTGTGGCAG-C-ACA
1 CTTAGGCATACG-AGTTCATTCCCAGTCTAAGATCGGA-CGAACCGAGGGTTGTGGC-GTCAACA
* * *
6329711 TGCTGGGCTCAGGCATGTGCTGGTG-CTGCATTTTTCTTCGTTG-GG-GCACCATCACCGGAGCA
63 TGCTAGGCT-AGGCATGTGCTGGTGCCGGCATTTTT-TTCG-CGCGGTGCACC-TCACCGGAGCA
* * * *
6329773 TCGCCGGAGAA-CCTGATCGGCGCCATTGGGGTTCCGAC-GATCGGAGGGTCCGGAGGGT-GT-G
124 TCGCCGGAGAAGCCTGACCGACGACATTGGAGTTCCGACTGATCGGAGGGT--GGAGGGTGGTGG
6329834 CGCACATGAT-GTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA-TCCCTCAT-CA
187 CGCACATGATGGTGCAAT-GG-G-T--TACTTGGCCCTTATATTGGCCCCCTATTCCCTCATACA
*
6329896 AACCTCGAGAACTCACAACCCCTTAAAGAGCATTTGAGAATTTACAGGTTTGCTGCCAGTGGCCA
247 AACATCGAGAACTCACAACCCCTTAAAGAGCATTTGAGAATTTACAGGTTTGCTGCCAGTGGCCA
*
6329961 TTAAGGTGTCTGGAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTT
312 TTAAAGTGTCTGGAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTT
*
6330026 TAGCTAAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTT-GGGCAAA
377 TAGCTAAATTTTTTT-TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCAAA
* * * *
6330090 AACACCTTCCGAAAACATTTTAAAAAATCCTGAACCGCAAAAATTTTTGAAAATCATGAAAAATA
441 AACACCTTCCAAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATA
* * * * **
6330155 GAAAATGAGTCGTCTTATCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
506 GAAAACGAGTCATCTTACCATGAAACATCACGTGAAGGCTTAAAAGACCATTGTATGAATTTACA
*
6330220 AGCCAAAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCGACCACCCTAT
571 AGCCAAAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCGACCACCCTAT
* * * *
6330285 CGATCCACGGTTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCAGCCC-CCCTACCCGTCCAC
636 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGAGCCAGCCCGCCC-ACCCGCCCAC
6330349 TCATTTCATCGATCGG
700 TCATTTCATCGATCGG
*
6330365 CTTAGGCATACAGAGTTCAGTCCCAGTCTAAGATCGGACGAGACCGAGGGTT
1 CTTAGGCATAC-GAGTTCATTCCCAGTCTAAGATCGGACGA-ACCGAGGGTT
6330417 ACAGTAACAA
Statistics
Matches: 688, Mismatches: 62, Indels: 36
0.88 0.08 0.05
Matches are distributed among these distances:
714 7 0.01
715 28 0.04
716 69 0.10
717 509 0.74
718 49 0.07
719 26 0.04
ACGTcount: A:0.27, C:0.24, G:0.23, T:0.26
Consensus pattern (715 bp):
CTTAGGCATACGAGTTCATTCCCAGTCTAAGATCGGACGAACCGAGGGTTGTGGCGTCAACATGC
TAGGCTAGGCATGTGCTGGTGCCGGCATTTTTTTCGCGCGGTGCACCTCACCGGAGCATCGCCGG
AGAAGCCTGACCGACGACATTGGAGTTCCGACTGATCGGAGGGTGGAGGGTGGTGGCGCACATGA
TGGTGCAATGGGTTACTTGGCCCTTATATTGGCCCCCTATTCCCTCATACAAACATCGAGAACTC
ACAACCCCTTAAAGAGCATTTGAGAATTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTGGA
ATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTT
TTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCAAAAACACCTTCCAAAAA
AATTTTAAAAAATCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCATCT
TACCATGAAACATCACGTGAAGGCTTAAAAGACCATTGTATGAATTTACAAGCCAAAAAAATGGC
ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCGACCACCCTATCGATCCACGGCTTGC
GCATCCCGTCTCTCTGGCCGACGTAGAGCCAGCCCGCCCACCCGCCCACTCATTTCATCGATCGG
Found at i:6330565 original size:26 final size:25
Alignment explanation
Indices: 6330529--6330579 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 25
6330519 GTTGACTTAG
6330529 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATT-CCAGTCTAA
6330555 GCATACGGAGTTCATTCCAGTCTAA
1 GCATACGGAGTTCATTCCAGTCTAA
6330580 TATCGGACCA
Statistics
Matches: 25, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 9 0.36
26 16 0.64
ACGTcount: A:0.27, C:0.25, G:0.20, T:0.27
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCAGTCTAA
Found at i:6331463 original size:26 final size:26
Alignment explanation
Indices: 6331433--6331485 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6331423 GTTGACTTAG
6331433 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
6331459 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
6331485 G
1 G
6331486 ATCAAACCAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:6332074 original size:26 final size:26
Alignment explanation
Indices: 6332045--6332097 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6332035 GTTGACATAG
* *
6332045 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCACAGCCTAA
*
6332071 GCATACGGAGTTTATTCACAGCCTAA
1 GCATACGGAGTTCATTCACAGCCTAA
6332097 G
1 G
6332098 ATGGGATGGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCACAGCCTAA
Found at i:6332099 original size:612 final size:614
Alignment explanation
Indices: 6331104--6332348 Score: 1394
Period size: 612 Copynumber: 2.0 Consensus size: 614
6331094 AGGCTTAAGG
6331104 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
*
6331169 AAACCCACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTACC
66 AAACCAACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTACC
* *
6331234 TGCCCGTCCGCCCGCCCGTTGATTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCAGTCTA
131 CGCCCGCCCGCCCGCCCGTTGATTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCAGTCTA
* *
6331299 AGATCGGACCGGACCAAGGGTTGCGGCAGCAGGATTGGTAGCACGCAGAGGTAGACTCGACCGAT
196 AGATCAGACCGGACCAAGGGTTGCGGCAGCAGGATTGGTAGCACACAGAGG-AGACTCGACCGAT
* * * * * *
6331364 CCCCGGCTTGCACATCCCGCCCTTCTGGCCGGCTGAGCGCTAGCACGTTCATTTCATGGGTTGAC
260 CCCAGGCTTGCACATCCCGCCCCTCTGGACGGCTGAGCACCAGCACGCTCATTTCATGGGTTGAC
* * * * *
6331429 TTAGGCATATGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAAACC
325 ATAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCACAGCCTAAGATCAAACC
* * * *
6331494 AGACCGAGGGTTGCGGCAGCACATGCCAGGCTCGTGCATGTGCTGGTGCTGCATTTTTCTTCACC
390 AGACCGAGGGTTACGGCAGCACATGCCAGGCTCGGGAATGTGCTGGTGCCGCATTTTTCTTCACC
* * * *
6331559 GGGGCACCAT-CA-G-CGGAGAACCTGACCGGCGGCATT-GGGTTTCCGGCGAT-GGGGGCCGGG
455 GGGGCACCATCCACGCCGGAGAACCTGACAGACGGCATTAAGG-TTCCGGCAATCGGGGGCCGGG
** *
6331619 GGGGGTGTGCGTACATGATGTGTGATGGGTGCT-GGTACTT-CCTTAATATTGGCCCCCTATCCC
519 GGGGGTGTGCACACATGATGTGCGATGGGTG-TAGGTACTTGCCTT-ATATTGGCCCCCTATCCC
* *
6331682 T-TTCAAACCTCAAGAACTCACACCCCCTTAAA
582 TCATCAAACCTCAAGAACCCACACCCCCTTAAA
6331714 GACCATTGTATGGAATTTACAAGCCAT-AAAAT-GC-TTGGC-TGCAGAAATAAT-AAGATGT-C
1 GACCATTGTAT-GAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT-ATGAAGATGTGC
* * *
6331773 CTAAACCAACCTACC-CCCTATCGATTCAC-GCTTGTGCATCCCGTCTCTCTGGCC-AGCGTAGT
64 CTAAACCAACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGA-CGTAGT
* *
6331835 -CCCGCGCCGCCCGCCAGTCTTGCTACCG-T-ATTT-GATCGGTTGGCTTTA-GCATACGGAGTT
128 ACCCGC-CCGCCCGCC---C--GC--CCGTTGATTTCG-TCGATTGGC-TTAGGCATACGAAGTT
* *** *
6331895 GCGATTCTCAGTCTAAGATCAGACTCGGATTGA-GGTTG-GGTAGCAGGATCTGGCTAGCACACA
183 -C-ATTCCCAGTCTAAGATCAGAC-CGGACCAAGGGTTGCGGCAGCAGGAT-TGG-TAGCACACA
* * * *
6331958 GAGG-GGC-CGGACCTATCCCAAGGCTTTGCGCATCCCGCCCCTCGGTGGAC-GCTGAGCACCCG
243 GAGGAGACTC-GACCGATCCC-AGGC-TTGCACATCCCGCCCCTC--TGGACGGCTGAGCACCAG
* *
6332020 CACGCTCGTTTCAT-GGTTGACATAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTT
303 CACGCTCATTTCATGGGTTGACATAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTC
*** *** * * *
6332084 ATTCACAGCCTAAGATGGGATGGGTCCGAGGGTTACGGTAGCACATGCTAGGCTCGGGAATGTGC
368 ATTCACAGCCTAAGATCAAACCAGACCGAGGGTTACGGCAGCACATGCCAGGCTCGGGAATGTGC
* * *
6332149 TGGTGCCGTATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACAGATGG
433 TGGTGCCGCATTTTTCTTCACCGGGGCACCAT---C----CA-CGCCGGAGAACCTGACAGACGG
*
6332214 CATTAAGGTTCCGGCAATCGGGGGGCCTGGGGGGGTGTGCACACATGATGTGCGATGGGTGTAGG
490 CATTAAGGTTCCGGCAATC-GGGGGCCGGGGGGGGTGTGCACACATGATGTGCGATGGGTGTAGG
* * *
6332279 TACTTGGCCCTTATATTGGCCCCCTATGCCTCATCAAACCTCGAGAACCCACATCCCCTTAAA
554 TACTT-G-CCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACCCACACCCCCTTAAA
*
6332342 GAGCATT
1 GACCATT
6332349 TGAGATTTTA
Statistics
Matches: 531, Mismatches: 62, Indels: 66
0.81 0.09 0.10
Matches are distributed among these distances:
603 5 0.01
604 38 0.07
605 12 0.02
606 15 0.03
607 17 0.03
608 8 0.02
609 28 0.05
610 42 0.08
611 48 0.09
612 159 0.30
613 21 0.04
614 4 0.01
620 2 0.00
622 1 0.00
623 29 0.05
624 3 0.01
625 44 0.08
627 18 0.03
628 37 0.07
ACGTcount: A:0.22, C:0.28, G:0.27, T:0.24
Consensus pattern (614 bp):
GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
AAACCAACCTACCACCCTATCAATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTACC
CGCCCGCCCGCCCGCCCGTTGATTTCGTCGATTGGCTTAGGCATACGAAGTTCATTCCCAGTCTA
AGATCAGACCGGACCAAGGGTTGCGGCAGCAGGATTGGTAGCACACAGAGGAGACTCGACCGATC
CCAGGCTTGCACATCCCGCCCCTCTGGACGGCTGAGCACCAGCACGCTCATTTCATGGGTTGACA
TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCACAGCCTAAGATCAAACCA
GACCGAGGGTTACGGCAGCACATGCCAGGCTCGGGAATGTGCTGGTGCCGCATTTTTCTTCACCG
GGGCACCATCCACGCCGGAGAACCTGACAGACGGCATTAAGGTTCCGGCAATCGGGGGCCGGGGG
GGGTGTGCACACATGATGTGCGATGGGTGTAGGTACTTGCCTTATATTGGCCCCCTATCCCTCAT
CAAACCTCAAGAACCCACACCCCCTTAAA
Found at i:6332979 original size:26 final size:26
Alignment explanation
Indices: 6332949--6333000 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
6332939 GTTGACTTAG
*
6332949 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6332975 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6333001 TATCGGACCA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.27, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:6333885 original size:26 final size:25
Alignment explanation
Indices: 6333849--6333899 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 25
6333839 GTTGACTTAG
6333849 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATT-CCAGTCTAA
6333875 GCATACGGAGTTCATTCCAGTCTAA
1 GCATACGGAGTTCATTCCAGTCTAA
6333900 AATCGAACCG
Statistics
Matches: 25, Mismatches: 0, Indels: 1
0.96 0.00 0.04
Matches are distributed among these distances:
25 9 0.36
26 16 0.64
ACGTcount: A:0.27, C:0.25, G:0.20, T:0.27
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCAGTCTAA
Found at i:6335656 original size:26 final size:26
Alignment explanation
Indices: 6335620--6335672 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6335610 GTTGACTTAG
6335620 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
6335646 GCATATGGAGTTCATTTCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6335672 G
1 G
6335673 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6335943 original size:903 final size:900
Alignment explanation
Indices: 6331714--6347217 Score: 18990
Period size: 892 Copynumber: 17.4 Consensus size: 900
6331704 CCCCCTTAAA
*
6331714 GACCATTGTATGGAATTTACAAGCCAT-AAAAT-GC-TTGGC-TGCAGAAATAAT-AAGATGT-C
1 GACCATTGTAT-GAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAAT-ATGAAGATGTGC
* * *
6331773 CTAAACCAACCTACC-CCCTATCGATTCAC-GCTTGTGCATCCCGTCTCTCTGGCCAGCGTAGT-
64 CTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTG
*
6331835 CCCGCGCCGCCCGCCAGTCTTGCTACCGTATTTGATCGGTTGGCTTTA-GCATACGGAGTTGCGA
129 CCCGC-CCGCCCGCC---C--GCT--CGT-TTCG-TCGGTTGGC-TTAGGCATACGGAGTT-C-A
* * * *
6331899 TTCTCAGTCTAAGATCAGACTCGGATTGA-GGTTG-GGTAGCAGGATCTGGCTAGCACACAGA-G
181 TTCCCAGTCTAAGATCAGAC-CGGACTGAGGGTTGCGGCAGCAGGATC-GGC-AGCACGCAGAGG
* * * * *
6331961 GGG-CCGGACCTATCCCAAGGCTTTGCGCATCCCGCCCCTCGGTGGAC-GCTGAGCACCCGCACG
243 GGGACCCGACCGATCCC-CGGC-TTGCGCATCCCGCCCCTC--TGGCCGGCTGAGCGCCCGCACG
* *
6332024 CTCGTTTCAT-GGTTGACATAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTTATTC
304 CTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* * * ** * * * * *
6332088 ACAGCCTAAGATGGGATGGGTCCGAGGGTTACGGTAGCACATGCTAGGCTCGGGAATGTGCTGGT
369 CCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * ** * **
6332153 GCCGTATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGCCGGAGAACCTGACAGATGGCATT
434 GCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATT
** * * *
6332218 AAGGTTCCGGCAATC-GGGGGGCCTGGGGGGGTGTGCACACATGATGTGCGATGGGTG-TAGGTA
499 GGGGTTCCGACGATCGGGGGGGCC-GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT-GGTA
* * *
6332281 CTTGGCCCTTATATTGGCCCCCTATGCCTCATCAAACCTCGAGAACCCACATCCCCTTAAAGAGC
562 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGC
* *
6332346 ATTTGAGATTTTACAGGTTTGCTGCCGGTAGCCGTTAAAGTGTCTGAAATGGGGACACTTTTTTC
627 ATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTC
* * * * *
6332411 GAATGGTCACAAAATCTTGTAAACTTCGAGTTTTTAGCTGAATCTTTTTGTGCATGCAAAAAAAA
692 AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC-CAACAAA
* **
6332476 AATACAAGGATCACATCTACCAAGTTT-GGGCCAAAACGCCTTCCGAAAAAATTTTAAAAAATCC
756 AATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCC
* * *
6332540 CGAACCGCAAAAAGTTTCAAAAATCATGAAAAATATAAAATGAGTCGTCTTGCCATGAAACTTCA
821 CGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCA
6332605 CGTGAAGGCTTAAGG
886 CGTGAAGGCTTAAGG
* * * *
6332620 GACCATTGTATGAATTTACGAGCCACAAAAATGGCATTGGCACGTAGAAATATAAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* *
6332685 AAGA-CCACCTACCACCCAATCGATCCACGGCTTGCGCATCCCGTCTCTCT-GCCCGACGTAGTG
66 AA-ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG-CGTAGTG
* * * *
6332748 CCCGCCCCCCTACCCGCCCGCTCGTTTCGACGGTCGGCTTAGGCATGCGGAGTTCATTCCCAGTC
129 CCCG---CCC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * * * * *
6332813 TAAGATCGGACCAGACCT-AAGGTTACGGTAGTAGGATCGACAGCACGCAGAGGGGGACACGACC
190 TAAGATCAGACCGGA-CTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACC
* * * *
6332877 GATCCTCGGCTTACGCATCCCACCCCTCTGGCCGACTGAGCGCCCGCACGCTCGTTTCATGGGTT
254 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTT
* *
6332942 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAATATCGG
319 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * *
6333007 ACCAGACCAAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATTTGCTGGTGTCGCATTTTTCTTC
384 ACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
* * ** * *
6333072 GTCGGGTCACCATCATCGGAGCATCATCGGAGAACCTGACCGGCAGCATTGGGGCTCC-A-GCAT
449 GTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACG-AT
* * *
6333135 C-GGGGGGCCGGGAGGGTGTGCGCAAATGATGTGCGATGGGTGCTGGTGCTTGGCCCTTATATTG
513 CGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* * *
6333199 GCCCCCTATCCCTAATCAAACCTCGAGAACTCACACCCCCTTAAGGGGCATTTGAGATTTTACAG
578 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
6333264 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
643 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
* * * * * *
6333329 TTGTACACTTTGACTTTTTAGCTTAATGTTTTTGTGCATGCCAATAAAAATACAAGGATCACATC
708 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
* * * * *
6333394 TACCAAGTGTGGGGCCAAAACTCTTTCCAAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGATT
773 TACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAG-TT
* * * * *
6333459 T-GAAAATCGTGAAAAATGGAAAACGAGCCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
837 TCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* *
6333522 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATAAGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * ** *
6333587 AAA-CCACCTACCACCCTATCGATCCACGGCTTGTGTATCCCGTCTCTAAGGCCGGCGTAGTACC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGT---
* * **
6333651 CGCCCGCCTGCCCGCCCCCTCGTTTCGTCATTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
128 -GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * * * ** *
6333716 AGATCGGACCGAACTGAGGGTTACGACAGCAAGATCGGCAACACGCAGAGGTAGACCCGACTGA-
192 AGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
* * * * *
6333780 CCCCAGCTTGCGCATCCCACCCCTCTGGCCGGCTGAGCGCCTGCACGCTCATTTCGTGGGTTGAC
257 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
* *
6333845 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT-CCAGTCTAAAATCGAACC
322 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* ** * * *
6333909 GGACCAAGCATTGCGGCCGCACATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATC
387 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * *
6333974 GGGGCACCA---T-----CA---CC-GAGAACCTGACCAGCGGTATTAGGGTTCCGACGATCGGG
452 GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGG
* *
6334027 GGGGCCGGGGAGGGTGTGCGTACATGATGTGCGATGGGTGCTGGTACTTGGCCCATATATTGGCC
517 GGGGCCGGGG-GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* * *
6334092 CCCTATCCCTCTTCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTT
581 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
* *
6334157 TGGTGCCAGTAGCCATTGAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
646 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * * *
6334222 TAGACATCGAGTTTTTAGCTGAATTTTTTTTGTGCATGCCAACAAAAATGCAAGGATCATGTCTA
711 TACACTTCGAGTTTTTAGCTGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
*
6334287 CCAA-TTTGGGGCCAAAACA-CCTTCCAAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGATTT
775 CCAAGTTTGGGGCCAAAA-ATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAG-TTT
* * *
6334350 -GAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAG
838 CAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* *
6334412 GACCATTGTATGAATTTACAAGCCGTAAAAATGGCATTGGCACGTA-AAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
*
6334476 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGGGTAGTCCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGT---
* * * *
6334541 CGCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTTATTCTCAGTCTA
128 -GCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
** * * *
6334606 AGATCAGATTGGACTGAGGGTTGCGGTAGCAGGATCAGCAGCACGCAGAGGGGGACCCAACCGAT
192 AGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
* * * * * * * *
6334671 CCCCAGCTTGTGCATCTCGCCCCTTTGGCCGGTTGAGCACCCGCACGCTAGTTTCGT-GG--G--
257 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
* **
6334731 TT--G---ACGGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGGATG
322 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * * *
6334791 GGACCGAGGGTTACGACAGCACATGCTGGGCTCGGGCATGTACTGGTGCCGCATTTTTCTTTGCC
387 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * * * * ** * *
6334856 GGGG---CA----C---GCATCGTCGGAGAACTTGACCGACAGCTTTAAGGTTCCGGCAATC-GG
452 GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGG
* * * ** *
6334910 GGGACCGTGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCTATTATTTTGGCCC
517 GGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* * *
6334975 CCTATCCCTCATCAAACCTTGAGAACTCACATCCCCTTAAAGAGCATTTGAGATTTTATAGGTTT
582 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
* * *
6335040 GCTGCCGGTAGCCGTTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGT
647 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* * * *
6335105 ACAGTTTGAGTTTTTAGCTTAATTTTTTTGTGCATGCCAACAAAAATACAAGGATGACGTCTACC
712 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
* * * * **
6335170 AAGTTTGGGACCAAAAATCTTTCCGAAAAAATTTTAAAAAAATCCCGAACCGCAGAAAGTTTTGA
777 AAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTT-AAAAAATCCCGAACCGTAAAAAGTTTCAA
* * *
6335235 AAATCATGAAAAACAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAG
841 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * * * * *
6335295 GACCACTGTTTGAATTGACAAGACATAAAAATGGCATTGGCACACAGAAATATGAAGATGTACCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
*
6335360 AAACCCACCTACCACCCTATCGATCAACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
* *
6335425 CGCCTGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCTCAGTCTAAGAT
131 CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
** * ** * * * *
6335490 TGGATCGGACCAAGGGTTGGGGCAGCAGGATCGGCAGTACGCAGAGGGGGACTCGATCGATCCCC
196 CAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCC
* * * * * *
6335555 GGCTTGCGCATCCCGCCCCTCTGGCCAGCTGAGCTCCTGCACGCTTGTTTCGTTGGTTGACTTAG
261 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* * *
6335620 GCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTTCCAGTCTAAGATCAGACCGGAC
326 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
* * * * *
6335685 CGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACACTTTTCTTCATCAGGG
391 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
* ** * *
6335750 CACCATCGTCAGAGCATCGTTGGAGAACCTGACCGGCGGCATTGGGGTTCCAATGATCGGGGGGG
456 CACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGG
*
6335815 CCGGGGGGGGCTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
521 CC-GGGGGGG-TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
*
6335880 TATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
584 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* * *
6335945 TGTCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAACCTTCTAC
649 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * * * *
6336010 ACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGTCAACAAAAAAAAAAGGATCACATCTACCAA
714 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA
* *
6336075 GTTTGGGGCCAAAATTCCTTCCGAAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAA
779 GTTTGGGGCCAAAAATCCTTCCG-AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAA
* * * * * *
6336140 ATCGTGAAAAATAGAAAATGAGTCGACTTGCCATAAAACTTCACGTGCAGGCTTAAGC
843 ATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * * *
6336198 GACCATTGTATGAATTTCCAAGCCTTAAAAATGCCATTGGCACGTAGAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* *
6336263 AAACCCACCTACCACCCTATCGATCGACGGCTTGTGCATCCCGTCTCTCTGGCC-GACGTAGTGC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG-CGTAGTG-
* * *
6336327 CCGTCGGCCCGGCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCT
129 CC--C-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * *
6336392 AAGATCGGACCAGACCGAGGGTTGCGGCAGTAGGATTGGCAGCACGCAGA-GGGGACCCGACTGA
191 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGA
* ** * *
6336456 TCCTCAACTTGCGCATCCCGCCCCTCTGGCCGGCTGAACACCCGCACGCTCGTTTCATGGGTTGA
256 TCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGA
* * * * *
6336521 CTTAGGCATATGGAGTTCATTCCCAATCTAAACATACAGAGTTCATTCCCAGCCTAAGATCGGAC
321 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGAC
* * * * **
6336586 CGGATCGAGGGTTGTGGCAGCACATGCTAGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCAC
386 CGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGT
* * * * *
6336651 CGGGGCACCATCATCGGAGCATCGTCAGAGAACCTGACCGGCGACATTGGGGATCCGACGATCGA
451 CGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCG-
** * * *
6336716 GGGGGGCCGATGCGGTGTGCGCACATGATGTGCGATGGGTGCTGTTACTTGGCCCTTATATTGGG
515 GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
* * * *
6336781 CCCCTATTCCTCACCAAACCTTGAGAACTCACACCCCCTTAAAGTGCATTTGAGATTTTACAGGT
580 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* * * *
6336846 TTCCTTGCCAATAGCAATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
645 TTGC-TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* ** * *
6336911 TGTACACTTTGAGTTTGAAGATGAACTTTTTTT-TGCATGCCAACAAAAATACAGGGATCACGTC
709 TGTACACTTCGAGTTTTTAGCTGAA-TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
** * * *
6336975 TACCAAGTTTGGGGCCAAATCTCCTTCTGAAAAAA-TTTAGAAAAATCTCGAACCG-CAAAAGTT
773 TACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTA-AAAAATCCCGAACCGTAAAAAGTT
*
6337038 TCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
837 TCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* *
6337102 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATGTGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * * * *
6337167 AAAGCCACCTACCACCCTATCGATCCACGACTTGCGCGTCCCGTCTCTCTGGCCGGCATAGTGCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTG--
* * *
6337232 CCCTGCCCGCCTGGCCGCTCGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAA
129 CCC-GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * * * * **
6337297 GATCGGACCGGA-TCACAGGTTGCAACAGTAGGATCGGTAGCATGTAGAGGCAGACCCGACCGAT
193 GATCAGACCGGACTGA-GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
** * * ** * * *
6337361 CTTCGGCTTACGCATCCAGCTTCTCTGGTCGACTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
257 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
* *
6337426 TTAGGGATACAGAGTTCATTCCCAG--T---C-TA---A--T-A-T--C-G-----GATC--A--
322 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * * *
6337466 -GACCGAGGGTTACAGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGTCGTATTTTTCTTCGTC
387 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * * * ** *
6337530 GGGGTACCA---T-----CAT---CGGAGAACTTGACAGGCGACATTAAGGTTCTGACGATCGGG
452 GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGG
** * * *
6337584 GGGGCCGGAAGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCTCTTATATTGGCAC
517 GGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* * *
6337649 CCTATCCCTCATCAAACCTCAAGAACTCACGCCCCTTTAAAGAGCATTTGAGATTTTACAGGTTT
582 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
* * *
6337714 GCTGCCAGTAGCCTTTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATATTGT
647 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* * * *
6337779 ACACTTCGAGTTTTTAGCTAAATTTTTTTATGCATACCAAAAAAAAATACAAGGATCACGTCTA-
712 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC-AACAAAAATACAAGGATCACGTCTAC
* * * **
6337843 CAACGTTTGGGACCAAAACA-CCTTCCCAAAAAATTTTAAAAAATCCTGAATGGTAAAAAGTTTC
776 CAA-GTTTGGGGCCAAAA-ATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTC
* *
6337907 GAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGAG
839 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAG-G
* *
6337970 G-CCATTGTATGAATTTACAAGCCATGAAAATGGCATTGGCACGCAGAAATATGGAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * *
6338034 AAACCCACCTACCACCCTATCGATCCATGGCTTGTGCATCCCATCTCTCTGGCCAGCGTAGTGCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
* * * *
6338099 CGCCCGCCCGCCCGCCTGCTTATTTCGTCAGTTGGCTTAGGCATAGGGAGTTCATTCGCAGTCTA
131 CGCCCGCCCGCCCG-CT-C--GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* ** * ** ** * *
6338164 AGATCAGACTGGACTGA-GGTTGTAGCAGTAGGATCACCAGCACAAAGAGAGGGACCCGATCGAT
192 AGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
* * *
6338228 CCCCGGCTTGCGCATCCCACCCCTCTGGCTGGCTGAGCGCCCGCACGTTCGTTTCATGGGTTGAC
257 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
* * * *
6338293 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATGCAGAGTTCATTCCCAGTCAAAGATCAGACC
322 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * * * *
6338358 GGACTGAGGGTTACGACAGCACATGCTGGGCCCGGGCATGTGCTGGTGCCACATTTTTCTTCATC
387 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * * * * *
6338423 GGGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGACGACATTAGGGTTTCAGA-GATCGA
452 GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATT-GGGGTTCCGACGATCGG
** *
6338487 GGGGG-CTAGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
516 GGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* *
6338551 CCCTATCCCTCATCAAACCTCTAGAACTCACACCCCCTTAAAGAGCATTTGCGATTTTACAGGTT
581 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
6338616 TGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
646 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * * * ** *
6338681 TACGCTTTGAGTTTTTAG-TGAATTTTTTTGTACATGCCAAAAAAAATACAAGGATCGTGTTTAC
711 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * * *
6338745 CAAGTTTTGGGGCCAAAAAGCCTTTCGAAAAAATTTAAAAAAATCCTGAACCATAAAAAGTTTCA
776 CAAG-TTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA
* * * *
6338810 AAAATCGTGAAAAATAGAAAACGGGTCATCTTGCCATGAACCTTCACGTGAAGGCTTAAGG
840 AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * * *
6338871 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATAAAGATCTACCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * *
6338936 AAACCCACCAACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCAAACGTAGTGCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
* * * * * *
6339001 CGCCTGCCCGCCTACCCGTTTGTTTCGTCAGTTGGCTTAGGCATACAGAGTTAATTCCCAGTCTA
131 CGCCCGCCCG----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* ** * * *
6339066 AGATCAGACCAG-CCAAGGGTT-----A-C-GG-T----AGCATGCAGAGGGGGACTCGGCCGAT
192 AGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
* * * * * * * *
6339118 CCTCGGCTTACACATCCTGCCCCTCTGGCTGGCTGAGCGCCCGCCCGCTCGTGTCGTGGGTTGAC
257 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
* * * * *
6339183 TTCGGCACACGGAGTTCATTCCCAGTCTAGGCATACGGAGTTCATTCCCAGCCTAGGATCGGACC
322 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * * * * *
6339248 AGATCGAGGGTTTCAG-AGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTTTTCGCC
387 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * * * * * * *
6339312 GAGACACCTTCGCCAGAGCATCACCGGAGAACCTGACCGACGGCATTGGGGTTGC-AGCGATCGG
452 GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGA-CGATCGG
* * *
6339376 GGAGGTC-GGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
516 GGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* *
6339440 CCCTATCCCTCATCAAACCTCGAGAACTCACTCCCCCTTAAAGAGCATTTGAGATTTTACAGATT
581 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
* *
6339505 TGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATGTTG
646 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * * * *
6339570 TACAGTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAGCAAAAATACAATGATGATGTCTAC
711 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
** * * * * *
6339635 CAAGTTTGGGGCCAAAACGCCTACCGAAAAAAATTTTAAAAAATCTCAAACGGCAAAAAGTTTCA
776 CAAGTTTGGGGCCAAAAATCCTTCCG-AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA
* *
6339700 AAAATCATGAAAAATAGAAAACTAGTCGTCTTGCCATGAAACTTCAGGTGAAGGCTTAAGG
840 AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
**
6339761 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * * *
6339826 -AACCCACCTACCACCCTATCGATCCACGGCTTGCGCTTCTCGTCTCTCTGGTCGGCGTAGTGCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
*
6339890 CGCCCGCCCGCCCACCTGCTCGTTTTGTCGGTTGGCTTAGGCATACGGAGTTCATT-CCAGTCTA
131 CGCCCGCCCG--C-CC-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
** * * * * * ** * **
6339954 AGATCAGACTAGACCGAGGGTTGTGGCAGCCGGATCGACATCACATAGAGGGGTACCCGGTCGAT
192 AGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
* * * * *
6340019 CCCCGACTTGTGTATCCCGCCCCTCTAGCCGACTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
257 CCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
* * * *
6340084 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCCCAGTCTAAGGTCAGACT
322 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC
* * * * ** *
6340149 AGACCGAAGGTTGCGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCATATTTTTCTTCGCC
387 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC
* * *
6340214 GGGGCACCA---TC---GC-T----GGAGAACCTGACTGGTGGCATTGGGGTTCCGGCGATCGGG
452 GGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGG
*
6340268 GGGG-CGGGGGGGTGTGCGCGCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
517 GGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCC
* *
6340332 CCTATCTCTCATCAAACCTCGAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTT
582 CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTT
* *
6340397 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTCTTCAAATGATCACAAAATCTTGT
647 GCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGT
* * * *
6340462 ACACCTCGAATTTTTAGCT-AATTTTTTTGCGCATGCCAACAAAAATACAAGGATCACATCTACC
712 ACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
** * * ***
6340526 AAGTTTGGGGCCAAAACGCCTTCCAAAAAAATTTTAAAAAATCCCGAACC-TCAAAAATTTTTGG
777 AAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGT-AAAAAGTTTCAA
* * *
6340590 AAATCCTAAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
841 AAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* **
6340650 GACCATAT-TATGAATTTAAAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCC
1 GACCAT-TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCC
* *
6340714 TAAACCCACCTACCGCCCTATCGATCCAGGGCTTGCGCATCCCGTCTCTCTGGCC-GACGTAGTG
65 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG-CGTAGTG
* * * * **
6340778 CCCGCCCGCCCACCCGCTCATTTCATCAGTTTATCTTAGGCATACGGAGTTCATTCCCAGTCTAA
129 CCCGCCCGCCCGCCCGCTCGTTTCGTC-GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * **
6340843 GATCAGACCAGACTGAGGGTTGTGGCAGCAGGATCGGCAGCACGTAAAGGGGGACCCGGTCGATC
193 GATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATC
* *
6340908 CCCGGCTTGCGCATCTCGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACT
258 CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACT
6340973 TAGGCA-ACGGAGTTCATTCCCAG--T---C-TA---AG---A-T--C-G-----GAT-----CG
323 TAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG
* * * * * * *
6341011 GACTGAGGGTTACGACAGCACATGCTAGACCCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCG
388 GACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCG
* * * * * *
6341076 GGGCACCATCGTC-GAGCATCGCTGGAGAACCTAACCGACGACATTAGGGTTCCGACGATCAGGG
453 GGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGG
*** *
6341140 GGGCTATGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
518 GGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* *
6341205 CTATCCCTCATCAAACCTCTAGAACTCACACCCCCTTAAAGTGCATTTGAGATTTTACAGGTTTG
583 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
*
6341270 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAATCTTGTA
648 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
** *
6341335 CACTTCGAGTTTTTAGCTGAATTTTTTTCCGCATGCCAGCAAAAATACAAGGATCACGTCTACCA
713 CACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* ** * **
6341400 AGTTTGGGGCCAAAACTCCTTTTGAAAATATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAA
778 AGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAA
* *
6341465 ATCATGAAAAATAGAAAAGGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
843 ATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * *
6341523 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAAAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
*
6341588 AAACCCACCTACCACCCCATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCC-GACGTAATGC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG-CGT-A-G-
* * * *
6341652 CTGCCCGCCCGCCTGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATACAGAGTTCATTCCTAGTCT
127 -TGCCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
** * * * *
6341717 AAGATCAGACCATACTGAGGGTTGCGTCAACAGGATCGAG-AACACGTAGAGGGGGACCCTG-CC
191 AAGATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCG-GCAGCACGCAGAGGGGGACCC-GACC
* * * *
6341780 AATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCCCTCACGCTCGTTTCGTGGGTT
254 GATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTT
* * * * *
6341845 GACTTAAGCATATGGAGTTCATTCCCAGTCTAAGCATACAGAGTTAATTCCCAGTCTAAGATCAG
319 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * * *
6341910 ACCGGATCGTGTGTTACGGCAACACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTC
384 ACCGGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
** * * ** * * ** *
6341975 ACCGGGGCACCATTGTCGGAGCATCGTCGGAGAACCTGACTAGTGGCATTGGGGTTTCGGTGACC
449 GTCGGGGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC
* * * * * * * ** *
6342040 GGGGGGTCCGACGGGTGTGTGCACACATTATGTGCGATGGTTGCTAGTACTTGAACTTTATATTG
514 GGGGGGGCCG-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTG
* * * *
6342105 GCCCCCTATCCCTCATCAAACCTCAAGATCTCACACCTCCTTAAAGAGCATTTGAGATTTTACAA
578 GCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAG
* * *
6342170 GTTTGTTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCATAAAATC
643 GTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATC
* *
6342235 TTATACATTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
708 TTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC
** * * *
6342300 TACCAA-TTTTTGGCCAAAACA-CCTTTCAAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTT
773 TACCAAGTTTGGGGCCAAAA-ATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTT
*
6342363 TCAAAAATCATGAAAAATA-AAAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
837 TCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* ** * *
6342426 GACCATTGTATGAATTTACAAGCCAAAAAAATGGCATTGGCACATAAAAATATGAAGATGTGCGT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * *
6342491 AAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCATCTCTCTGGCCGGCGT-G-G--
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
* * * * * *
6342552 TGCTCGACCGCCCGTTCATTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAGAT
131 CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * * * * *
6342617 CAGACCAGACTGAGGGTGGCGGCAACAGGATCGGCAGCACGCAGAGGCGCACCCGATCGATCCCT
196 CAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCC
* * * * *
6342682 GGCTTACGCATCCCACCCCTCTGGTCGGCTGAGCGCCCGTACGCTCGTTTCATGGGTTGGCTTAG
261 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* * * * * *
6342747 GCATACGGAGTTCATTCTCAGTCTAAGCGTACGAAGTTCATTCCCAGTCTAGGATCGAACTGGAC
326 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
* * * * * *
6342812 CAAGGGTTGCGGCAGCACATGTTGGGCGCGGGCATGTGCTGGTGCTGCATTTTTTTTCGTTGGGG
391 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
* ** **
6342877 CACCATCG-CTGGAGCATCGCCGGAGAACCTAACCGGCGGCATTGACGTTCCGACGATC-GAAGG
456 CACCATCGTC-GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG
* ** ** *
6342940 GCC-TGGGGGTGCACGCACATGATGTGCGATGGGTGCTGGTACTTGGCAATTATATTGGGCCCCT
520 GCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
*
6343004 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCACTTGAGATTTTACAGGTTTGCT
585 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
*
6343069 GCCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
650 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * * *
6343134 CTTCGAGTTTTGAGTTGAAATTTTTTGTGCATGCCAATAAAAATACAAGGATCACGTCTACCAAG
715 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
* * * * * ** *
6343199 TTT-TGGCCAAAACTCCTTTCGAAAAAATTTTTAAAAATCTCGAACAATAAAAGGTTTCAAAAAT
780 TTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
* *
6343263 CGTGAAAAATAGAAAACGAGTCGTCTTGCCATTAAACTTCACGTGAAGGCTTAAGG
845 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * *
6343319 GAACATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATATGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* *
6343384 TAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAACGTAGT---
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
* * *
6343446 -GCCCGCCCGTCCGTTCGTTTCGTCGGTTGGCTTAGGCATACGAAGTTCATT-CCAGTCTAAGAT
131 CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * * * * * * * **
6343509 CGGACCGGACTAAGGGTTACGGTAGCAGTATCAGCAGCATGTAGAGGGGGAACCGGTCGATCCCC
196 CAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCC
* * *
6343574 GACTTGCGCATCCCGCCCCTCTGGCCGGCTGAACGCCCGCACGCTCGTTTCGTGGGTTGACTTAG
261 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* * * *
6343639 GCATATC-GAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCTAGTCTAAAATTGGACCGGA
326 GCATA-CGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGA
* * * * * ** * * *
6343703 CCAAGGGTTGCGGCAGCAAATGCTGGGCTCGAGTATGTGCTGGTGTCATATTTTTCTTTGCCAGG
390 CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGG
* *
6343768 GCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGTGGCATTGGGGTTCCGGCGATCGGGGGG
455 GCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG
* * * *
6343833 GTCGGGGGGGTGTGCGCACATGATGTGCGATTGGAGCTGGTACTTGGCCCTTATATTGACCCCCT
520 GCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
** *
6343898 ATCCCTCATCAAACCTTAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCT
585 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* *
6343963 GCCAGTAGCCATAAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
650 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * *
6344028 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGTATCATGTCTACCAAG
715 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
* *
6344093 TTTGGGGCCAAAAATCCTTCCAAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAAT
780 TTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT
* *
6344158 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGGAGACTTAAGG
845 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * *
6344214 GACCATTGTATGAATTTACAAGCCTTAAAAATGGCATTTGCATGCAGAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* *
6344279 AAACCCACCTACCACCCTATCGATCCACGGCTTCCGCATCCCGTCTCTCTGGCCGGCGTAGT---
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
*
6344341 -GCCCGCCCG--C-C-CGTTTCGTCGGTTGGCTAAGGCATACGGAGTTCATTCCCAGTCTAAGAT
131 CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
* * ** *** * * * * * *
6344401 CAGATCGAACTGAGCATTATAGCAGTAGGATTGACAGCATGCAGAGGGGGACCCGACCGATGCCT
196 CAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCC
* * * *
6344466 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCTGAACGCTCATTTCATGGGTCGACTTAG
261 GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* *
6344531 GCATACGGAGTTCATTCCCAGTCTAAGCATATC-GAGTTCATTCCCAGTCTAAGATCGGATCAGA
326 GCATACGGAGTTCATTCCCAGTCTAAGCATA-CGGAGTTCATTCCCAGTCTAAGATCGGACCGGA
* * * * * *
6344595 CTGAGGGTTGTGACAGCACATGCTGGGCTCTGGCATGTGCTGGTGCCACCTTTTTCTTTCGTCGG
390 CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC-TTCGTCGG
* * * * *
6344660 GGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCAGCAGCGTTGGGGTTCCGACGATCGGGGG
454 GGCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGG
*
6344725 GGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCG
519 GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* * * * *
6344789 TATCCCTCATCAAACCTCCAAAACTCACACACCCTTAAAGAGCATTTGAGATTTTATAGGGTTGC
584 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* *
6344854 TGCCAGTAGCCATTAAAGTATCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTTGTAC
649 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* * * * * * *
6344919 ACTTTGATTTTTTAGATGAATTTTGTTGTGCATGCCAAAAAAAATATAAAGATCACGTCTACCAA
714 ACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAA
* * * * * *
6344984 GTTTGGGTCCAAAAATCCTTCCAAAAAAATTTTAAAAAATCTCAAACCGCAAAAAGTTTCCAAAA
779 GTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAA
* * * *
6345049 TCGTGAAAAATGGAAAACGAGTCGTCTTGCAATGAAACTTCATGTGAAGGCTTAAGG
844 TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * *
6345106 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAAAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* ** * * *
6345171 AAACCCACCTACCA-CCTATCAATCCACAACTTTCGCATCCCGTCTCTCTGGTCGGCGTAGTGCC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
* * *
6345235 CGCCCG--C-CCC-CTCAATTT-GTCTGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGA
131 CGCCCGCCCGCCCGCTC-GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* ** * * * * * *
6345295 TCAAATGGGACCGAGGGTTACAGCAGCAGGATCGGCAGCACGCAGAGGGGGAACCGGCCTATCCC
195 TCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCC
* * ** * * * *
6345360 CGACTTGCGCATCCCGCCCCTTTGGTTGGCAGAGCGCCAGCACGCTCATTTCGTGGGTTGACTTA
260 CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTA
6345425 GGCATACGGAGTTCATTCCCAG--T---C-TA---AG---------A-TC----A---GACCGGA
325 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGA
* ** * * * * **
6345464 CCGAGGGTTGTGATAGCACATGCTGGGCTCGTGCATGTACTGCTGCCGTATTTTTCTTCACCGGG
390 CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGG
* * * *
6345529 GCACAATCGTCAGAGCTTCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCC-AGCGATCGAGGG
455 GCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGA-CGATCGGGGG
*
6345593 GGCCGGGGGGGCTATGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCC
519 GGCCGGGGGGG---TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* * * * *
6345658 CCTTATCCCTCATCAAACCTCAAGCACTAACTCCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
581 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
6345723 TGCTGCCAGTAGCCTTTAAAGTGTCT-AGAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
646 TGCTGCCAGTAGCCATTAAAGTGTCTGA-AATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
* * * *
6345787 GTACACTTCGAGTTTTTAGCTGAATTTTTTTGTACATACCAAAAAAAATACAAGGATCAGGTCTA
710 GTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTA
* **
6345852 CCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTTG
775 CCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCA
6345917 AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
840 AAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* *
6345978 GACCATTGCATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCT
1 GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
* * *
6346043 AAACCCACCTACCACCCTATCGATACACAGCTTGCGCATCCCGTCTCCCTGGCC-GACGTAGTGC
66 AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAG-CGTAGTGC
* *
6346107 CCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGA
130 CCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
** * * * * * * * * ** * * *
6346172 TTTGATCAGACTAAGGGTTACGGTAGCAGGTTTGG-AGCACGTAGAGGGGGACTTGGCCGGTCCT
195 TCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCC
* * * * * *
6346236 CAGCTTGCGCATCCCACCCCTCTGGCCGACTGAGCGCCCGTACGCTCCTTTCATGGGTTGACTGA
260 CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTA
* * ** **
6346301 GGCATACGGAGTTCATTCTCAGTCTAAGCGTACGGAGTTCATTCCCAGTCTAAGATCATATTGGA
325 GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGA
* * ** * * * * **
6346366 CTGAGGGTTACGGCAGCACATGCTATGCCCGGGAATGTACTGGTGCTGCATTTTTCTTCACCGGG
390 CCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGG
* * *** *
6346431 GCACAATCGTCGAAGCATTATCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGG
455 GCACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGG
* * ** * *
6346496 GTC-GGGGGGTGTGCGCACATGATGTGCAATGGGTATTGGTATTTGGCCCTTATATTGGCCCTCT
520 GCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
*
6346560 ATCCCTCATCAGACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
585 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
* *
6346625 GCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACG
650 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACA
* * *
6346690 CTTTGAGTTTTTAGCTAAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCATG
715 CTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAG
* **
6346755 TTTGGGGCCAAAACTCCTTTCCGAAAAAATTTTAAAAAATCTTGAACCGTAAAAAGTTTCAAAAA
780 TTTGGGGCCAAAAATCC-TTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAA
*
6346820 TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCATGTGAAGGCTTAAGG
844 TCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
* * * * *
6346877 GACCGTTTGTACGAATTTACAAGCCATAAAAATGGCATTGGCATGGAAAAATATGAAGATGTGCC
1 GACC-ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCC
* * * * * *
6346942 TAAACCTACCTACCATCCTATCAATCCATGACTTACGCATCCCGTCTCTCTGG-CAGGCGTAGTG
65 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCA-GCGTAGTG
* * * * *
6347006 CCCGCCCACCCGCCCGATTGTTTCGTCGGTTGGCTTAGGTATACGAAGTTCATTCCCAGTCTAAG
129 CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* ** * * * * *
6347071 ATCAGACCGAACCAAGGGTTACGGTAGCAGGATCGGCAACACGTAGAAGGGGACCCGACCGATCC
194 ATCAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCC
* * *
6347136 CCGGCTTGCGCATGCCGCCCCTCTGGTCGGCTGAGCGCCCGCACGCTCGTTTCATGGTTTGACTT
259 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTT
6347201 AGGCATACGGAGTTCAT
324 AGGCATACGGAGTTCAT
6347218 CAGACTTTGT
Statistics
Matches: 12652, Mismatches: 1646, Indels: 605
0.85 0.11 0.04
Matches are distributed among these distances:
861 64 0.01
864 20 0.00
865 91 0.01
866 179 0.01
867 330 0.03
868 116 0.01
869 61 0.00
870 3 0.00
871 38 0.00
872 613 0.05
873 316 0.02
874 3 0.00
875 4 0.00
876 254 0.02
877 108 0.01
878 67 0.01
879 4 0.00
880 164 0.01
881 85 0.01
882 292 0.02
883 138 0.01
884 105 0.01
885 5 0.00
886 15 0.00
887 70 0.01
888 168 0.01
889 594 0.05
890 1081 0.09
891 399 0.03
892 1200 0.09
893 349 0.03
894 251 0.02
895 720 0.06
896 9 0.00
897 4 0.00
898 250 0.02
899 187 0.01
900 332 0.03
901 453 0.04
902 853 0.07
903 982 0.08
904 608 0.05
905 424 0.03
906 413 0.03
907 130 0.01
908 10 0.00
909 17 0.00
910 13 0.00
911 20 0.00
912 26 0.00
913 5 0.00
915 2 0.00
916 7 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (900 bp):
GACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCT
AAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCAGCGTAGTGCC
CGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
CAGACCGGACTGAGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCC
GGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGAC
CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGG
CACCATCGTCGGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGG
CCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTA
TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT
TTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC
ATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGG
Found at i:6339222 original size:26 final size:26
Alignment explanation
Indices: 6339186--6339239 Score: 90
Period size: 26 Copynumber: 2.1 Consensus size: 26
6339176 GGTTGACTTC
*
6339186 GGCACACGGAGTTCATTCCCAGTCTA
1 GGCACACGGAGTTCATTCCCAGCCTA
*
6339212 GGCATACGGAGTTCATTCCCAGCCTA
1 GGCACACGGAGTTCATTCCCAGCCTA
6339238 GG
1 GG
6339240 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.22, C:0.30, G:0.26, T:0.22
Consensus pattern (26 bp):
GGCACACGGAGTTCATTCCCAGCCTA
Found at i:6341888 original size:26 final size:26
Alignment explanation
Indices: 6341849--6341904 Score: 85
Period size: 26 Copynumber: 2.2 Consensus size: 26
6341839 TGGGTTGACT
** *
6341849 TAAGCATATGGAGTTCATTCCCAGTC
1 TAAGCATACAGAGTTAATTCCCAGTC
6341875 TAAGCATACAGAGTTAATTCCCAGTC
1 TAAGCATACAGAGTTAATTCCCAGTC
6341901 TAAG
1 TAAG
6341905 ATCAGACCGG
Statistics
Matches: 27, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.32, C:0.21, G:0.18, T:0.29
Consensus pattern (26 bp):
TAAGCATACAGAGTTAATTCCCAGTC
Found at i:6346335 original size:26 final size:26
Alignment explanation
Indices: 6346305--6346354 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
6346295 GACTGAGGCA
*
6346305 TACGGAGTTCATTCTCAGTCTAAGCG
1 TACGGAGTTCATTCCCAGTCTAAGCG
6346331 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
6346355 ATCATATTGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.24, C:0.24, G:0.22, T:0.30
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCG
Found at i:6347613 original size:26 final size:26
Alignment explanation
Indices: 6347584--6347636 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6347574 GGTTACTTAG
6347584 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6347610 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6347636 G
1 G
6347637 ATCGGATTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6348911 original size:26 final size:26
Alignment explanation
Indices: 6348881--6348933 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6348871 GTTGACTTAG
6348881 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6348907 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6348933 G
1 G
6348934 ATCGGATTAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6351948 original size:26 final size:26
Alignment explanation
Indices: 6351912--6351964 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6351902 GTTGACTTAG
*
6351912 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
6351938 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
6351964 G
1 G
6351965 ATCGGAACGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:6354530 original size:26 final size:26
Alignment explanation
Indices: 6354494--6354546 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6354484 GTTGACTTAG
*
6354494 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6354520 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6354546 G
1 G
6354547 ATCGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6355206 original size:906 final size:904
Alignment explanation
Indices: 6352779--6365045 Score: 15074
Period size: 894 Copynumber: 13.8 Consensus size: 904
6352769 GGGTTATGGT
* * * *
6352779 AGCACATGCTAGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCGTCATCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * * * *
6352844 GCATCACCAGAGAACCTGACAGGCGGCGTTGGGGTT-TCGACGATC-GGGGGGCCGGGGGGTGTG
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGTG
* * * * *
6352907 TGCACATGATGTGTGGTGGGTGCTGGTACTTGGCCCCTATATTGGGCCCCTATCCCTTATCAAAC
131 TGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
*
6352972 CTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTA
196 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
6353036 AAGTTTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
261 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * * * *
6353101 CTAAATTCTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCTAAAAC
326 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * * * *
6353166 T-CTTTCCAAAAAAATTTTAAAAAATCCCAAACTGTAAAAAGTTTCAAAAATCGTGGAAAATAGA
391 TCCTTT-CGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGA
*
6353230 AAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
455 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
* * *
6353295 CCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATTG
520 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * * * * *
6353360 ATCTATGGCTTGCGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGCCCGTCCACCCTCCCGTTCG
585 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCG
* * * * * * *
6353425 TTTCGTCAGTTGGCTTAGGCATACGAAGTTCAAT-CTAGTGTAAGATCAGACCGGACTGAGGGTT
650 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
* * * * * * * * *
6353489 GTGGCAACACGATCGGCAGCACGCAGTGGGGGACCGGATCGATCTCTGGCTTGTGCATCCCGCCC
715 GCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
* * * *
6353554 CTCTGGCTGGCTGAGCGCTCGCACGCTTGTTTCGTGGGTTGACTTAGGAATACGGAGTTCATTCC
780 CTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCC
* * **
6353619 CAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCGGA-TCAGACCGAGGGTTGTAGC
845 CAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTTGCGGC
* * * * *
6353679 CGCACATGTTGGGCTCGGCCATGTGCTGGTGCCACATTTTTCTTCACCGGGGCA--A-CATC---
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
6353738 G---CA--GGAGAACCTGACCGACGGCATTGGGGTT-TCGACGATCGGGGGGGCCGGGGGGTGTG
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGTG
* * * ** *
6353797 TGCACATGATGCGCGATGGGTGCTGATACTTGGCCGTTATATTATCCACCTATCCCTCATCAAAC
131 TGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* *
6353862 CTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTA
196 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* **
6353927 AAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAAAGTTGTACAC-T-GAGTTTTTAG
261 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
6353990 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
326 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * *
6354055 TCCTTTCGACAAAA-TTTAAAAAATCTCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAA
391 TCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAA
*
6354119 AACGAGTCGTCTTCCCATGAAACTTCACGTG-AGGTCTTAAGGGACCATTGTATGAATTTACAAG
456 AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG-CTTAAGGGACCATTGTATGAATTTACAAG
** * *
6354183 CCATAAAAATGGCATTGGCACACAGGAATACGAAGATGTGCCTAAACCCACCTACCACCCTATCG
520 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
*
6354248 ATCCACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC-CGCCGCCCGCCTGCCTGCCC
585 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC-CCGCCCG-C--CC-GCCC
* * * * * *
6354312 GCTCGTTTCGTCTGTTGGCTCAGGCATACGGAGTTCATTCCTC-GCCTAAGATCGGACCAAACCA
645 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCC-CAGTCTAAGATCAGACCAGACCG
* * * * * ** *
6354376 AGTGTTCCGGTAGTAGGATCGGCAGCACGCAGAGGGGGACCCAACCGATCGTCGGCTTGCACATC
709 AGGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATC
* * *
6354441 CCAG-CCCTCTGGCTGGCTGTGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATATGGAGT
774 CC-GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGT
* *
6354505 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGATCGAGGGTTGTG
838 TCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCG
6354570 GC
903 GC
* ** * *
6354572 AGCACATGCTGGGCTTGGTAATGTGCTGGTG-TACCATTTTTCTTCACCGGGGCACCATCGTCGG
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCA-CATTTTTCTTCGCCGGGGCACCATCGTCGG
* * * * * *
6354636 AGCATCACCGGAGAACCTGACCGACGACATTGAGGTTCTAG-CGATCGGGGGGGTCGGGGGGCGT
65 AGCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGT
* * * *
6354700 GTGCACATGATTTGCGATGGGTGCTGGCACTTGGCCCTTATATTTG-CCCTTATCCCTCATCAAA
130 GTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
*
6354764 CCTCGAGAACTCACAACCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
195 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * *
6354829 AAAGTGTCTGAAATGGGGACATTTTTTTCAAATGGTCACAAAAACTTGTACACTTCGATTTTTTA
260 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* *
6354894 GCTGAATTTTTTTGTGCACGCCAACAAAAATACAAGGATCACGCCTACCAAGTTTGGGGCCAAAA
325 GCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA
* * *
6354959 CTCCTTTCGAAAAAATTTAAAAAAATCTCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGA
390 CTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGA
*
6355024 AAACGAGTCGTCTTCCCATGAAACTTCACGTG-AGGTCTTAAGGGACCATTGTATGAATTTACAA
455 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG-CTTAAGGGACCATTGTATGAATTTACAA
*
6355088 GCCATAAAAATGGCATTGGCATGCGGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
519 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* * * * *
6355153 GATTCACGACTTGTGCATCCCGTCTCTCTGGCCGACGTAGT----GCCCGCCCGCCCGCTCGCTC
584 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
* * *
6355214 GTTTCGTCGATTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGT
649 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGT
** * * * * *
6355279 TGCGGCAATAGGATCGACAACACGCAGAGGGGGACTCGACCGATCCCTGGCTTGCGCATCCTGCC
714 TGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCC
* * * * * *
6355344 CCTCTGGGCAGCTGAGCGCCCGCACACTCATTTTGTGGGTTGACTTAGGCATACGTAGTTCATTC
779 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
**
6355409 CCAG--T---C-TA---AG---A-T--C-G-----GAT----C-GGACCGAGGGTTGCCAC
844 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
** * * * *
6355444 AGCACATGCTGGGCTCGGGCATGTGCTGGTAACACATTTTTCTTCACCGAGCCACCATTG-CTGG
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTC-GG
* * * * * **
6355508 ATCATCGTCGGAGAACCTGACCGACGACATTGAGGTT-TCGGCGATCGGGGGGGCTAGGGGGTGT
65 AGCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGT
* * ** *
6355572 GCGCACAAGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT-TACCTCTATCCCTCATCAAA
130 GTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* *
6355636 CCTGGAGAACCCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
195 CCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATT
* * *
6355701 AAAGTGTTTGAAATGGGGACACTTTTTTCAAAT-GTCACAAAATCTTGTACATTTTGAGTTTTTA
260 AAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTA
* * *
6355765 GCTAAATTGTGTTTGTGCATGCCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
325 GCTGAATT-TTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * * * * *
6355830 ACTCCTTCCAAAAAAATTTTAAAAAATCTCAAAGCGCAAAAGGTTTCAAAAATCTTGAAAAATAG
389 ACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAG
* * * *
6355895 AAAATGCGTCGCCTTCCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
454 AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAA
6355960 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
519 GCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATC
* *** ** * * ** * *
6356025 AATCTTTGGCTTGCATATCCCGTCTCTCTGGTCGACGTAGTGCCCGCTAGCCCGTCTGCCCGCTC
584 GATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTC
* * * * * *
6356090 GTTTCATCAGTTGGCTTAGGCGTACAGAGTTCATTCCCAGTCTAAGATTAGACCAGACTGAGGGT
649 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGT
* * * * *
6356155 TGTGGCAGCAGGATCGGTAGCACGCAGAGGGGGACCCGATCGATCCCCGGCTTGCACATCCCACC
714 TGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCC
* * * * * *
6356220 CTTCTGGCCGGCTGAGCGGCCGCACGCTCGTTTCTTGGGTAGTCTTAGGCATATGGAGTTCATTC
779 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
** * * ** *
6356285 AAAGTCTAACCATATGGAGTTCATTCTTAGTCTAAGATCGGA-TCGGACGGAGGGTTGCGGC
844 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTTGCGGC
*
6356346 AGCACA---T--GCT---GC-----C---T----CATTTTTCTTCACCGGGG---CA----C---
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* *
6356381 G-ATCATCGGAGAACCTGACCGACAGCATTAGGGTTC-CGGA-GATCGGGGGGGCCGGGGGGGTG
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTC-GACGATCGGGGGGGCC-GGGGGGTG
* *
6356443 TGCGCACATGATGTGCCATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
129 TGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
** *
6356508 ACCTTAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTA-CCAT
194 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
6356572 TAAAGTGTCTGAAAT-GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTC-ATGTTTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA-GTTTT
* *
6356635 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATTACGTCTACCAA-TTTGGGGCAAA
323 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
** * * * * * *
6356699 AAAACC-TCCCAAAGAAATTTTAAAAAATCTTGAACCGTAAAAAGTATCAAAAATTGTGAAAAAT
388 AACTCCTTTCGAAA-AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAAT
*
6356763 AGAAAACGAGTCGTCTTGCCATGAAACATCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
452 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* * *
6356828 AAGCCA-AAAATTTGGCATTGGCATGCAGAAATATGATGATGTGCCTAAACCCACCTACCATCCT
517 AAGCCATAAAA-ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * *
6356892 ATCGATCCATGACTTGCGCATCCCGTTTCTCTGGCCGACGTAGT----GCCCACCCGCCCGCCCG
581 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCG
* * * *
6356953 CTCGTTTCATCGGTTGGCTTAGGGATACAGAGTTCATTCCCAGTCTAAGATCGGA-CAGGACCGA
646 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCA-GACCGA
* * * * *
6357017 GGGATGCAGCAGCAGGATTGACAGCACGCAGA-GGGGACCC-AGCCGATCCCCAGCTTGCGCATC
710 GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATC
* * * *
6357080 CAGCCCCTCTGGCCGGCTTAGCGCCCGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGAAGTT
774 CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTT
* * * * *
6357145 CATTCCCAGTCT--G-A-GCGGAGTTCATTCCTAGTTTAAGATCGGA-TCGGATCGAGGGTTGCA
839 CATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTTGCG
*
6357205 GT
903 GC
* * * *
6357207 AGCACATGCTGGGCTCGGGCATGTGTTGGTGTCATATTTTTCTTCGTCGGGG---CA---T----
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * * *
6357262 -CATCATCGGAGAACCTAACCGGCGGCATTGGGGTT-TCGACGATCGGGGGGGCTGAGGGGTTGT
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCG-GGGGGTGT
* * *
6357325 GTGCACAGGATGTGTGATGGGTGCTGGTACTTAGCCCTTATATTGGCCCCCTATCCCTCATCAAA
130 GTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * *
6357390 CCT-GTAAAACTCACACCCCCTTAAAGAGTATTTGAGATTTTACAGGTTTGCTGCCAATAGCCAT
195 CCTCG-AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
6357454 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCATAAAATCTTGTACACTTCGTGTTTTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * *
6357519 AGCTGAA-TTTTTTGCGCATGCCAAAAAAAATATAAGGATCACGTCTACCAAGTTTGGGGACAAA
324 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * * *
6357583 ACAT-TTTTTGAAAAAAATTTAAAAAATCCCGAACCGTAAAAAG-TTTAAAAGATCATGAAAGAT
389 AC-TCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAA-ATCGTGAAAAAT
6357646 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
452 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
* *
6357711 AAACCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCTTA
517 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * * *
6357776 TCGATCCACGGCATGCGCATCCCGTCTCTCTAGCCGGCGTAGT----GCTCACCCG--CG--CGC
582 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGC
* * * * *
6357833 TCCTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTGAGG
647 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGG
* * * * * * *
6357898 GTGGCGGCAGTAGGATCGACAGCACACAGAGGGGGACCCGATCGATCCTCGGCTTGCGCATCCTG
712 GTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
** * * * *
6357963 CCCCTCTGGCCGATTGAACGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCGTACGGAGTACAT
777 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * * *
6358028 TCCCAGTCTAAGTATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCAGC
842 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
* * * * *
6358091 AGCACATGCTGGGCTTGAGCATGTGCTGGTGTCACATTTTTCTTCACCGAGGCACCATCGTCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * *
6358156 GCATCA-CTGGAGAACCTGACCGACGGCATTGGGGTTC-CAACGATCGGGGGGCCCGAGGGGTGT
66 GCATCATC-GGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGT
*
6358219 GCGCACATGATGTGCCG-TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
130 GTGCACATGATGTG-CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * *
6358283 ACCTCGAGAACTCACACCCCCTGAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGACAT
194 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
6358348 TAAAGTGTCTGAAATGGGGACACATTTTTCGAATGGTCACAAAATCTTGT--A---C-A---TTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * **
6358404 A----AA--GTTTT-T--A-GCCAACAAAAATACAAGGATCACGTCTAGCAAGTTTTGGAACAAA
324 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * * *
6358459 ACCCCTTCCGAAAAAATTTTAAGAAATCCCGAACCGTAAAAA-TTTT-GAAATACGTGAAAAACA
389 ACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAAT-CGTGAAAAATA
* * * *
6358522 GAAAACGAGTCGACTTGGCATGAAACTTCACGTTAAGGCTTAAGGGACCACTGTATGAATTTACA
453 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
**
6358587 AGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
518 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * *
6358652 CGATCCACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGTCCGCCTGCCCGCCCGCT
583 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCT
6358717 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG
648 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG
* ** * * * * * *
6358782 TTACGAAAGTAGGATCGGTAGCATGCAGAGGTGGACCC-AGTCAATCCCCGGCTTGCGCATCCCG
713 TTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGA-CCGATCCCCGGCTTGCGCATCCCG
* * *
6358846 CCCCTCTGGCCGTCTGAGCTCCCGCACGCTCGTTTCGTGTGTTGACTTAGGCATACGGAGTTCAT
777 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * * *
6358911 TGCCAGTCTAAGCATACGGAGTTCGTTCCCAGTCTAAGATTGGATTGGACCGAGGGTTGCGGC
842 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
* * * * *
6358974 AGCACATGCTGGGCTCGGACATGTGCTGGGGCCGCATTTTTCTTTGCCGAGGCACCATCGTCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * * *
6359039 GCATCGTCGGAGAACCTGACC-AGTGGCATTGGGGTTC-CGACGATCTGGGGGGTCGGGGCGGGT
66 GCATCATCGGAGAACCTGACCGA-CGGCATTGGGGTTCTCGACGATC-GGGGGGGCCGGG-GGGT
* * * *
6359102 GTGCGCACTTGATGTGCGATGGGTGCTGGTACTTCGCGCTTATATTGGCCCCCTATCCCTCATCA
128 GTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * *
6359167 AAACTCGAGAACTCACACCCCTTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCA
193 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
*
6359232 TTAAAGTGTCTGAAATGGGGACACTTTTTTCCAATGGTCACAAAATCTTGTACACTTCGAGTTTT
258 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * * *
6359297 TTGCCGAATTTTTTTGTGCATGCCAACAAAAATACAAAGGATCACATCTGCAAAGTTTGGGGCCA
323 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATAC-AAGGATCACGTCTACCAAGTTTGGGGCCA
* ** *
6359362 AAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACC-AACAAAAGTTTCGAAAATCATGAAAAA
387 AAACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTA-AAAAGTTTTAAAAATCGTGAAAAA
* *
6359426 TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTACGAATTTA
451 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
6359491 CAAGCCATAAAAATGGCATTGGCAGGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
516 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * ** **
6359556 ATCGATCCATGGCTTGCGTATCCCGTCTCTCTGGTCGGCGTAGCACCCATCCGCCCGCCCGCCCG
581 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCG
* * *
6359621 CTCATTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCAGATCGAG
646 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAG
* * * * *
6359686 GGTTACGGCAGCAGGATCGGTAGCATGTAGAGGGGGACCCAACCGATCCCCGGCTTGCGCAT---
711 GGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCC
* * * *
6359748 ACCCCTCTGGCCGACTGAGCGGCCACACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
776 GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
*
6359813 TTCCCAGTCTAAG-AT-C-G-G---------A--C------C-G-C---ACCGAGGGTTGTGGC
841 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
** * ** *
6359851 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCACCAGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* *** ** * *
6359916 GCATCGTCGGAGAACCTGTTTGGTGGCATTGGGGTT-TCGACGATCGAGGGGGCCGGGGGGGGTG
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGTG
* *
6359980 TGCTCACATGATGTGCGATGGGTGCTGTTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCTA
131 TG--CACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * *
6360045 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGAATTAACAGGTTTGCTGCCCGTAGCCAT
194 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
6360110 TAAAGTGTCTAAAATGAGGACAC-TTTTTCAAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTC-AAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* * * *
6360174 TATCTGAATTTTTTTGTGCACGCCAATAAAAATACAAGGATCACGTCTTCCAAGTTTGGGGCCAA
323 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * *
6360239 ACCTCCTTCCGAAAAAATTTTAAAAAATCTTGAACCGCAAAAAGTTTTGAAAATCGTGAAAAATA
388 AACTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATA
* * * * * *
6360304 GAGAACAAGTCATCTTGCCATGAAACTGCACGTGAAAGCTTAAGGGACCATTATATGAATTTACA
453 GAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACA
** ** * *
6360369 AGCCATAAAAATGGCATTGGCACACAGAAATACAAAGATGTGCCTTAACCCACCTACCAACCTAT
518 AGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTAT
* * * * *
6360434 GGATCCACTGCTTGCGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGCCCGCCCACCCGCTCGCT
583 CGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCT
* * * *
6360499 CGTTTCATCGGTCGGCTTAGGCATACGGTGTTCATTCCCAGTCTAAGATCAGACCAAACCGAGGG
648 CGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGG
* * * * * * ** * *
6360564 TTACAGTAGCAGGATTGGCAGCACGTAGAGGGGGACCCGGCCGATCCTGGGC-TCCTGCATCCTG
713 TTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGC-GCATCCCG
* * * *
6360628 CCCCTCTGGCCGGCTGAGCCCCCCGCGCGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCA
777 CCCCTCTGGCCGGCTGAG-CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCA
* * ** * **
6360693 TTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCAAGGGTTGCAAC
841 TTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
* * * * *
6360757 AACACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGCCGAGGCACCATCGCCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * * * ** * *
6360822 GCATCGTCGGAGAACCTGATCGACGGCATTAGGG-TCCCGGTGATCGGGCGGGCTGGAAGGGTGT
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGG--GGG-GT
* * * * * *
6360886 GTGCGCACATGAGGTACGATGGATGCTGGTACTTAGCCCTTATATTGGCCCCCTATCCTTCATCA
128 GTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
*
6360951 AACCTCGAGAACTCACACTCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
193 AACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCA
* * * *
6361016 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAGAATCCTGTACAGTTCAAGTTTT
258 TTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTT
* ** * *
6361081 TAGCTGAATTTTTTTATGCACACCAACCAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAA
323 TAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAA
* * * * * * *
6361146 AACTCC-TTCCAAAAAATTTTTCAAAAATCCCGAACCGCAAAAAGTTTCAAAAAACATGAAAAAT
388 AACTCCTTTCGAAAAAA-TTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAAT
* * * * *
6361210 AGAAAAACGAGTCGTCTTGCCTTGAAACGTCATGTAAAGGCTTAAGGGACCATTGTATGAGTTTA
452 AG-AAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * *
6361275 CAAGCCATAAAAATGGCATTTGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACTCT
516 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * *
6361340 ATCGATCCACGACTTGCGCATCCCGTCTCTCTAGCCGGCGTAGTGCCCGACCGCACGCCCGCCAG
581 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCG
* * * * * * *
6361405 CTCATTTCATCTGTTGGCTTAGGCAAACGGAGTTGACTCCCAGTCTAAGATC-GAACCGGACCGA
646 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCGA
* *
6361469 GGGTTGCGGCAGC---A----C-GCA-G-A-A-GGGGACCCGACCGATCCTCGGCTTGTGCATCC
710 GGGTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCC
* * ** *
6361522 CGCCCCTCT-GCCGGCTGAGCGCCCGCATGCTCATTTTATGGGTTGACTTAGGCATACAGAGTTC
775 CGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTC
* * *
6361586 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCGGA-TCGGACTGAGGGTTCCGG
840 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTTGCGG
6361650 C
904 C
* * * *
6361651 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGAGGCACCATTGTCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * *
6361716 GCATCA-CTGGAGAACCTGACCAATGGCATTGGGGTTC-CGGCGATCGGGGGGGCCGGGGGTGTG
66 GCATCATC-GGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGG-GTG
* * * * *
6361779 TGCGCACATGATGTGTGATGGGTGCTGGTACTTGGGCCTTATACTGGCTCCCTATCCCTCATCAA
129 TGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* * * *
6361844 ACCTTGAGAACTCAC-CCTCCTTAAAGTGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCAT
194 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
*
6361908 TAAAGTGTCTGAAATGGGGACACTTTTTGCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* *
6361973 AGCTGAATTTTTTTGTGCATGCCACCAAATATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
324 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
* * * * * *
6362038 AATCC-TTCAAAAATAATTTTAAAAATTCCCAAACCGTAAAAAGTTTTGAAAATCGTGAAAAATA
389 ACTCCTTTCGAAAA-AATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATA
*
6362102 GAAAACTAGTCGT-TTGGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
453 GAAAACGAGTCGTCTT-GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
*
6362166 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATTTGCCTAAACCCACCTACCACCCTA
517 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
*
6362231 TCGATCCACGGCTTGCGCATCTCGTCTCTCTGGCCGGCGTAGT--------GCCCGCCCGCCCGC
582 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGC
* * * * *
6362288 TCGTTTGGTCGATTGGCTTAGGCATACAGAATTCATTCCCAGTCTAAGATTAGACCAGACCGAGG
647 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGG
* * * * * * * * * *
6362353 GTTACGGCAACAGGATTGGCAGCATGTAGAGGAGGACCCGTCTGATCCCCGGCTTACGCATCACG
712 GTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
* * * * *
6362418 CCCCTCTGGCCGGTTGAGCTCCTGTACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCAT
777 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * * *
6362483 TCCTAGTCTAAGCATACGGAGTTCATTACCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGC
842 TCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
* * **
6362546 AGCACATGCTGGGCTGGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCACCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * *
6362611 GCATCGTCGGAGAACCTGACCGAAGGCATTGGGGTTC-CGACGATC-GGGAGGCCGGGGGGTGTG
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGTG
* * * *
6362674 CGCACATGATGTGCGACGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCTCTCATCAAAC
131 TGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
* *
6362739 CTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGGAGCCATTA
196 CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
* *
6362804 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATATTGTACACTTCAAGTTTTTAG
261 AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
* * *** * *
6362869 CTGAATTTTTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCTATGGAGTTTGAGGCCAAAAT
326 CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * *
6362934 TCCTTTCGAAAAAATTTTAAAAAATCT-GAAACTGCAAAAAGTTTCAAAAATCGTGAAAAATAGA
391 TCCTTTCGAAAAAATTTTAAAAAATCTCG-AACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGA
*
6362998 AAACGGGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
455 AAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAG
** *
6363063 CCATAAAAATTTCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
520 CCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
*
6363128 ATCCACGGCTTGCGCATCCTGTCTCTCTGGCCGGCGTAGT--------GCCCGCCCGCCCGCTCG
585 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCG
* * * * * *
6363185 TTTGGTCGGTTGGTTTAGGCATATGGAATTCATTCCCTGTCTAAGATCAGACCAGACTGAGGGTT
650 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTT
* * * * * * *
6363250 ACGGCAACAGGATCGACAGCACGCAGAGAGGGACCCGATCGATCCCCTGCTTGTGCATCCCGCCC
715 GCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCC
* * * * *
6363315 CTCTGGCCGGCTGAGCGCCCACACG-TGAGTTTCGCGGGTTGACTTAGGCAAACGGAGTTCATTT
780 CTCTGGCCGGCTGAGCGCCCGCACGCT-CGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
* * * * * * *
6363379 GCAGTCCAAGCATATGGAGTTCATTCCGAGTCTAAGATCAGACCGGACCGAGGGTTGCGGT
844 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
* *** ** * * *
6363440 AGCACATGCTAGGCTCGGGCATGTGCTGGTGTTGCATTTTTCTTCATCGGGGCACTATCGCCAGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * * * * *
6363505 GCATCACCAGAGAACCTAACCGGCGGCATTGGGGTT-TCGACGATCAGGGGAGCCGGGGGGGTGT
66 GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCC-GGGGGGTGT
* * *
6363569 GCGCACATGATGTGCGATTGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCAAA
130 GTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAA
* * *
6363634 CCTTGAGAACTCACACCCCCTTAAAAAGCATTTTGGGATTTTACAGGTTTGCTGCCAGTAGCCAT
195 CCTCGAGAACTCACACCCCCTTAAAGAGCA-TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
6363699 TAAAGTGTCTGAAATGGGAACGCTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * * *
6363764 AGCTGAATTTTTTTGTGCATGCCATCAAAAATAGAATGATCATGTCTACCAAGTTTTGGGCCAAA
324 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAA
*
6363829 ACTCC-TTCTGAAAAAATTTTAAAAAATCCCGAACCGTAAAAA-TTTTCAAAAATCGTGAAAAAT
389 ACTCCTTTC-GAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTT-AAAAATCGTGAAAAAT
* * *
6363892 AGAAAACGAGTCGTCTTGCCATGAAACTTCAGGTGACGGCTTAAGGGACAATTGTATGAATTTAC
452 AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
*
6363957 AAGCCGTAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
517 AAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
* * *
6364022 TTGATCCACGGCTTGCGCATCCCGTCTCTCCGGCCGGTGTAGT--------GCCCGCCCGCCCGC
582 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGC
* * * * * *** *
6364079 TCGTTTCATTGGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATCGGATTGGACCAAGG
647 TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGG
* ** * *
6364144 GTTGTGGCAGCAGGATCGATAGCACGCAAAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCG
712 GTTGCGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCG
* * * *
6364209 CCCCTCTGGTCGGCTGAGCCCCCGCACGTTCGTTTCGTGGGTTAACTTAGGCATACGGAGTTCAT
777 CCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCAT
* * * *
6364274 TGCCAGTCTAAGCATGC-AATGTTCATTCCCAATCTAAGATCGGA-TCGGACCGAGGGTTAG-GG
842 TCCCAGTCTAAGCATACGGA-GTTCATTCCCAGTCTAAGATCGGACT-GGACCGAGGGTT-GCGG
6364336 C
904 C
* * ** * * * *
6364337 AGCAAATGCTGGGCTCGAGCATGTGCTGGTGCTGCATTTTTCTTCGCCAGGGCATCATTGCCGGA
1 AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
* * * *
6364402 GCATC-GCTGGAGAACCTAACCGACGGCATCGGGGTTGC-GGA-GATCGGGGGGGCCGGGGGGTG
66 GCATCATC-GGAGAACCTGACCGACGGCATTGGGGTT-CTCGACGATCGGGGGGGCCGGGGGGTG
* * *
6364464 TGCGCACATGATATGCGATGGGTGCTGATACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
129 TGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
*
6364529 ACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
194 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* * ** *
6364594 TAAAGTGTTTAAAATGCAGACACTTTTTTCAAATGGTCACAAAATCTTCTACACTTCGAGTTTTT
259 TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* *
6364659 AGCTGAATTTTTTTGTTCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAA
324 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AA
*
6364724 AAC-CCTTTTGAAAAAATTTTAAAAAATCGT-GAACCGTAAAAA-TTTTCAAAAATCGTGAAAAA
388 AACTCCTTTCGAAAAAATTTTAAAAAATC-TCGAACCGTAAAAAGTTTT-AAAAATCGTGAAAAA
* *
6364786 TAGAAAAGGACTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
451 TAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* * * ** *
6364851 CAAGCCTTAAAAATAGCATTGGAACACAGAAATATGAAGATGTGCCTAAACCCACCTATCACCCT
516 CAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * * * * *
6364916 ATCAATACACTGCTTGCGCAACCCGTCTCTCTGGCCGACATAGT----GCCCACCCGCCCGTCCG
581 ATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCG
* ** * * *
6364977 CTCGTTTCGTCAGTTGGCTTAGGCATACGGAGCACATTCCCAGTCTAAGATCGGATCAGACAGAG
646 CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAG
6365042 GGTT
711 GGTT
6365046 TCGAGAGCAC
Statistics
Matches: 9889, Mismatches: 1208, Indels: 541
0.85 0.10 0.05
Matches are distributed among these distances:
861 46 0.00
862 1 0.00
864 2 0.00
865 92 0.01
866 96 0.01
869 12 0.00
870 208 0.02
871 138 0.01
872 631 0.06
873 77 0.01
874 2 0.00
875 180 0.02
876 632 0.06
877 314 0.03
878 1 0.00
879 107 0.01
880 154 0.02
881 191 0.02
882 158 0.02
883 589 0.06
884 106 0.01
885 179 0.02
886 2 0.00
887 7 0.00
888 210 0.02
889 119 0.01
890 251 0.03
891 316 0.03
892 122 0.01
893 307 0.03
894 1118 0.11
895 634 0.06
896 249 0.03
897 691 0.07
898 179 0.02
899 75 0.01
900 56 0.01
901 4 0.00
902 32 0.00
903 204 0.02
904 102 0.01
905 148 0.01
906 631 0.06
907 277 0.03
908 234 0.02
909 5 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (904 bp):
AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGGGGCACCATCGTCGGA
GCATCATCGGAGAACCTGACCGACGGCATTGGGGTTCTCGACGATCGGGGGGGCCGGGGGGTGTG
TGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAAC
CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTA
AAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAG
CTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC
TCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAA
AACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGC
CATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGA
TCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCCCGCTCGT
TTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTG
CGGCAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCC
TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
AGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTGCGGC
Found at i:6356299 original size:26 final size:26
Alignment explanation
Indices: 6356269--6356319 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
6356259 TAGTCTTAGG
6356269 CATATGGAGTTCATTCAAAGTCTAAC
1 CATATGGAGTTCATTCAAAGTCTAAC
**
6356295 CATATGGAGTTCATTCTTAGTCTAA
1 CATATGGAGTTCATTCAAAGTCTAA
6356320 GATCGGATCG
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.31, C:0.18, G:0.16, T:0.35
Consensus pattern (26 bp):
CATATGGAGTTCATTCAAAGTCTAAC
Found at i:6358932 original size:26 final size:26
Alignment explanation
Indices: 6358896--6358948 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6358886 GTTGACTTAG
*
6358896 GCATACGGAGTTCATTGCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6358922 GCATACGGAGTTCGTTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6358948 G
1 G
6358949 ATTGGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6361602 original size:26 final size:26
Alignment explanation
Indices: 6361573--6361625 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6361563 GTTGACTTAG
6361573 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
6361599 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6361625 G
1 G
6361626 ATCGGATCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6362498 original size:26 final size:26
Alignment explanation
Indices: 6362468--6362520 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
6362458 GTTGACTTAG
6362468 GCATACGGAGTTCATT-CCTAGTCTAA
1 GCATACGGAGTTCATTACC-AGTCTAA
6362494 GCATACGGAGTTCATTACCAGTCTAA
1 GCATACGGAGTTCATTACCAGTCTAA
6362520 G
1 G
6362521 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 24 0.92
27 2 0.08
ACGTcount: A:0.28, C:0.23, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTACCAGTCTAA
Found at i:6365896 original size:26 final size:26
Alignment explanation
Indices: 6365845--6365897 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6365835 GTTGACTTAG
* * *
6365845 GCATATGTAGTTCATTCCCCGTCTAA
1 GCATACGTAGTTCATTCCCAGCCTAA
6365871 GCATACGTAGTTCATTCCCAGCCTAA
1 GCATACGTAGTTCATTCCCAGCCTAA
6365897 G
1 G
6365898 ATCAAACCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.28, G:0.17, T:0.30
Consensus pattern (26 bp):
GCATACGTAGTTCATTCCCAGCCTAA
Found at i:6367350 original size:891 final size:890
Alignment explanation
Indices: 6365448--6368704 Score: 4201
Period size: 891 Copynumber: 3.7 Consensus size: 890
6365438 AATTTATCAA
** * * * *
6365448 AAAAAGTTTAAAAAATTGTG-AAAATAG-AAACGAGTGGTCTTG-CATGAAACTTCACATAAAGG
1 AAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
6365510 CTTAAGGGACCATTGTATGAATTTACAAGCCAT-AAAATGGCATTGGCACACAAGAAATATGAAG
66 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAC-AGAAATATGAAG
* * * * * *
6365574 ATGTGCGTAAACCCATGCTACCA-CCTATCGATACACAGGCTTGCGCATCCCGTCTTTCTAGCCG
130 ATGTGCCTAAACCCA-CCTACCACCCTATCGATCCAC-GGCCTGCGCATCCCATCTCTCTAGCCG
* * * *
6365638 GACGTAATGCCCATCCGCTCGCCCAGCGTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCATT
193 G-CGTAGTGCCC-GCC-C-CG--CA-C-TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * * * * *
6365703 CCCAGTCTAAGATCGGACCGGACCATGGGTTACGGTAGCAGCATCGGCAACACATAGAGGGGGAC
250 CCCAGTCTAAGATCGGACCGAACCAAGGGTTACGGCAGCAGGATCGGCAGCACGTAGAGGGGGAC
* * * * *
6365768 CCGGCCGATCCCCAGCTTGCGCATCCCGCTCCTC-GACCGGTTGAGCGCCCGCACGCTCATTTCA
315 CCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCA
* * *
6365832 TGGGTTGACTTAGGCATATGTAGTTCATTCCCCGTCTAAGCATACGTAGTTCATTCCCAGCCTAA
380 TGGGTTGACTTAGGCATACGGAGTTCATT-CCCGTCTAAGCATACG-AGTTCATTCCCAGTCTAA
* * * * * *
6365897 GATCAAACCAGACCAAAGATTGCGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCAACAGTT
443 GATCAGACCAGACCGAGGGTTGCGACAGCACATGCTGGGCTCG-GCATGTGCTGGTGCAACATTT
* * *
6365962 TTCTTCATCGGGGCACCA---TC---G---C-C-GGAGAACTTGACCGGCGGTATT-AGGGTTCC
507 TTCTTCGTCGGGGCACCATCGTCAGAGCATCGCTGGAGAACCTGACCGGCGGCATTGA-GGTTCC
* * * *
6366015 GACGATCGGGGGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTAATTGGCCCTTA
571 GACGATCAGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTA
* *
6366080 TATTGGCCCCTTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
636 TATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
*
6366145 TACAGGTTTGCTGA-AAGTAGCGAA-TAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCA
701 TACAGGTTTGCT-ACCAGTAGC-AATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCA
*
6366208 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATGCAAGGA
764 CAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGA
* * * * *
6366273 TCACGTCTACCATGTTTGGGACCAAAAATCCATCCGAAAAAATTTTTAAAAATCCAGAACC-T
829 TCATGTCTACCAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCC-GAACCGT
*
6366335 CAAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
1 -AAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAG
* **
6366400 GCTTAAGGGACCATAGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAG
65 GCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAG
* * *
6366465 ATGTGCCAAAACCCACCTACCACCCTATCGATCGACGGCCTGCGCATCCCATCTCTCTAGCCGGT
130 ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCCTGCGCATCCCATCTCTCTAGCCGGC
*
6366530 GTAGTGCCCGCCCACGCACTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
195 GTAGTGCCCGCCC-CGCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* ** *
6366595 AGATCGGACCGAACAAAGGGTTGTGGCAGCAGGATCGGCAGCACGTAGAGGGGGACCCGATCGAT
259 AGATCGGACCGAACCAAGGGTTACGGCAGCAGGATCGGCAGCACGTAGAGGGGGACCCGACCGAT
* * *
6366660 CCCCGGCTTGCAG-ATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTAGGTTGA
324 CCCCGGCTTGC-GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGA
* **
6366724 CTTAGGCATACGGAGTTCATTCCCTGTCTAAGCAAACGAAGTTCATTCCCAGTCTAAGATTGGAC
388 CTTAGGCATACGGAGTTCATTCCC-GTCTAAGCATACG-AGTTCATTCCCAGTCTAAGATCAGAC
* *
6366789 CAGACCGAGGGTTACGACAGCACATGCTGGGCTCAGGCATGTGCTGGTGTC-GCATTTTTCTTCG
451 CAGACCGAGGGTTGCGACAGCACATGCTGGGCTC-GGCATGTGCTGGTG-CAACATTTTTCTTCG
** *
6366853 TCGGGGCACCATCGTCAGAGCATCGCTGGAGAACCTGACCGAAGGCATTGAGGTTCCGGCGATC-
514 TCGGGGCACCATCGTCAGAGCATCGCTGGAGAACCTGACCGGCGGCATTGAGGTTCCGACGATCA
* *
6366917 GGGGGGCCGGGGGGTGTGCGCACATGATGTGTGAAGGGTGCTGGTACTTGGCCCTTATATTGGCC
579 GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
6366982 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
644 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
* *
6367047 TGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGG-CACTTTTTTCAAATTGTCACAAAATCTTG
709 TGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * *
6367111 TACACTTCGAGTTTTTAGCTGTATTTTTTTG-CCATGCCAACAAAAATACAAGGATTATGTCTAC
774 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTAC
* * *
6367175 CAAGGTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCTCGAACCGT
839 CAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATC-CGAACCGT
*
6367228 AAAATGTTTTGAAAATCGTG-AAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
1 AAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
** * *
6367292 CTTAAGGGACCATTGTATGAATTTTTAAGCCATGAAAATGGCATTGGCACGCAGAAATATGAAGA
66 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGA
* * ** ** *
6367357 TGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGAACATCCCATCTCTCCGGCAGGCG
131 TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCCTGCGCATCCCATCTCTCTAGCCGGCG
*
6367422 TAGTGCCCG-CCCG--CTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAG
196 TAGTGCCCGCCCCGCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * ** * **
6367484 ATCAGACC-AGACCGAAGGTTGTA--GCAGTAGGATTAGCAGCATGCGGAGGGGGACCCGACCGA
261 ATCGGACCGA-ACC-AAGGGT-TACGGCAGCAGGATCGGCAGCACGTAGAGGGGGACCCGACCGA
* * *
6367546 TCCCTGGCTTGTGCATCCCGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGA
323 TCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGA
6367611 CTTAGGCATACGGAGTTCA------T-T---C---C-----CA-----A-TCTAAGATCAGACCA
388 CTTAGGCATACGGAGTTCATTCCCGTCTAAGCATACGAGTTCATTCCCAGTCTAAGATCAGACCA
* * * ** *
6367652 GACCGAGGGTTGC-AGCAGCACATGCTCGGCTCGGGCATGTGTTGATGCTGCATTTTTCTTCGCC
453 GACCGAGGGTTGCGA-CAGCACATGCTGGGCTC-GGCATGTGCTGGTGCAACATTTTTCTTCGTC
* * *
6367716 GGGGCACCATCGCCAGAGCATCG-TCGGAGAACCTGACCGGCGGCATTGAGGTTCCGGCAATCAG
516 GGGGCACCATCGTCAGAGCATCGCT-GGAGAACCTGACCGGCGGCATTGAGGTTCCGACGATCAG
*
6367780 GGGGGCCGGGGGGGTGTGCGCACATGGTGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
580 GGGGGCC-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
*
6367845 TCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
644 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
6367910 TGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
709 TGCTACCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
*
6367975 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAAAAATACAAGGATCATGTCTAC
774 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTAC
* * * *
6368040 AAAGTTTAGGGCCAAAAATCCTTCCAAAAAAATTTTAAAAATTCCCGAACCGT
839 CAAGTTTGGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAAT-CCGAACCGT
** * *
6368093 AAAAAGTTTCAAAAATCGTGAAAAATAGAGAACGAGTTGTCTTGCCATGAAACTTCACGTGAAGG
1 AAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
*
6368158 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATTGCATTGGCACACAGAAATATGAAGA
66 CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGA
* * *
6368223 TGTGCCTAAACCCACCTACCAGCCTATCGATCCACGGCCTGCG-ACTCCCGTCTCTCTGGCCGGC
131 TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCCTGCGCA-TCCCATCTCTCTAGCCGGC
* * * * *
6368287 GTAGTGCCCGCCCGCCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTGATTCCTAGTCTA
195 GTAGTGCCCGCCC-CGCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * *
6368352 AGATCGGACC-ACACCGAGGGTTACGGTAGCAGGATCGACAGCACGTAGAGAGGGACCCGACCGA
259 AGATCGGACCGA-ACCAAGGGTTACGGCAGCAGGATCGGCAGCACGTAGAGGGGGACCCGACCGA
** * * *
6368416 TCCCCGGCTTGCGCATCCCGCCCCTCTGGCATGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTGA
323 TCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGA
* * *
6368481 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCTTTCCCAGTCTAAGATCGGAT
388 CTTAGGCATACGGAGTTCATTCCC-GTCTAAGCATAC-GAGTTCATTCCCAGTCTAAGATCAGAC
** * * ** *
6368546 TGGACCGAGGGTTGCGGCAGCACATGCTGGGCTTTGAAATGTGCTGGTGCCACATTTTTCTTCGT
451 CAGACCGAGGGTTGCGACAGCACATGCTGGGC-TCGGCATGTGCTGGTGCAACATTTTTCTTCGT
* * ** * *
6368611 CAGGGCACCATCG-CTGGAGCATCGCCAGAGAACCTGACAGGCGGCATTGGGGTTCCGACGATC-
515 CGGGGCACCATCGTC-AGAGCATCGCTGGAGAACCTGACCGGCGGCATTGAGGTTCCGACGATCA
* *
6368674 GGAGAGGCCGGGGGGTGTGCGCCCATGATGT
579 GG-GGGGCCGGGGGGTGTGCGCACATGATGT
6368705 ACACTTCGAA
Statistics
Matches: 2073, Mismatches: 219, Indels: 147
0.85 0.09 0.06
Matches are distributed among these distances:
860 3 0.00
861 123 0.06
862 9 0.00
863 151 0.07
864 58 0.03
865 92 0.04
866 167 0.08
867 4 0.00
868 3 0.00
869 4 0.00
870 165 0.08
873 1 0.00
876 1 0.00
877 1 0.00
878 1 0.00
879 1 0.00
880 1 0.00
881 1 0.00
883 121 0.06
884 152 0.07
885 4 0.00
886 2 0.00
887 169 0.08
888 23 0.01
889 18 0.01
890 49 0.02
891 254 0.12
892 105 0.05
893 63 0.03
894 153 0.07
895 54 0.03
896 119 0.06
897 1 0.00
ACGTcount: A:0.26, C:0.25, G:0.25, T:0.25
Consensus pattern (890 bp):
AAAAAGTTTTGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGG
CTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGA
TGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCCTGCGCATCCCATCTCTCTAGCCGGCG
TAGTGCCCGCCCCGCACTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
ATCGGACCGAACCAAGGGTTACGGCAGCAGGATCGGCAGCACGTAGAGGGGGACCCGACCGATCC
CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCATGGGTTGACTT
AGGCATACGGAGTTCATTCCCGTCTAAGCATACGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
CGAGGGTTGCGACAGCACATGCTGGGCTCGGCATGTGCTGGTGCAACATTTTTCTTCGTCGGGGC
ACCATCGTCAGAGCATCGCTGGAGAACCTGACCGGCGGCATTGAGGTTCCGACGATCAGGGGGGC
CGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTACC
AGTAGCAATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT
CGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTT
GGGGCCAAAAATCCTTCCGAAAAAATTTTAAAAAATCCGAACCGT
Found at i:6368515 original size:26 final size:26
Alignment explanation
Indices: 6368486--6368538 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6368476 GTTGACTTAG
6368486 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6368512 GCATACGGAGTTCTTTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6368538 G
1 G
6368539 ATCGGATTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6370172 original size:26 final size:26
Alignment explanation
Indices: 6370121--6370173 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6370111 GTTGACTTAG
* *
6370121 GCATACGTAGTTCATTCCCCGTCTAA
1 GCATACGTAGTTCATTCCCAGCCTAA
6370147 GCATACGTAGTTCATTCCCAGCCTAA
1 GCATACGTAGTTCATTCCCAGCCTAA
6370173 G
1 G
6370174 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.25, C:0.30, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACGTAGTTCATTCCCAGCCTAA
Found at i:6371041 original size:26 final size:26
Alignment explanation
Indices: 6371004--6371056 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6370994 GTTGACTTAG
* *
6371004 GCATACGGAGTTCATTCCCTGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6371030 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6371056 G
1 G
6371057 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:6374311 original size:899 final size:897
Alignment explanation
Indices: 6368702--6376963 Score: 10541
Period size: 899 Copynumber: 9.2 Consensus size: 897
6368692 GCGCCCATGA
* * * *
6368702 TGTACACTTCGAATTTTTAGCTCAATTTTTTTGTGCATGCCATCAAAAATA-GAGCGATCACGTC
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAG-GATCACGTC
* *
6368766 TACCAAGTTTTGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGTAAAAA-TTT
65 TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTT
* * * * *
6368830 TCAAAAATCGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCAGGTGACGGCTTAAGGG
130 T-GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG
* *
6368895 ACAATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAAAAATATGAAGATGTGCCTA
194 ACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTA
* * *
6368960 AACCCACCTACCACCCTATTGATCCACGGCTTGCGCATCCCGTCTCTCCGGCCGGTGTAGT----
259 AACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC
* * * * *
6369021 GCCTGCCCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGATA
324 GCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATC
** * * * * *
6369086 GGATTGGACCAAGGGTTGTGGCA-ACAGGATCGATTGCACGCAGAGGGGGCCCCGATCCGATCCC
389 GGACCGGACCGAGGGTTGCGGCAGA-AGGATCGGTAGCACGCAGAGGGGGACCCGA-CCGATCCC
* *
6369150 C-GCTTGCGCATCCCGCCCCTCTGGTCCGGCTGTA-CGCCCCGCACCGCTCGTTTCATGGGTTAA
452 CGGCTTGCGCATCCCGCCCCTCTGG-CCGGCTG-AGCG-CCCGCA-CGCTCGTTTCGTGGGTTGA
* * * *
6369213 CTTAGGCATACGGAGTTCATTGCCCAGTCTAAGCATGCAAAGGTCATTCCCCAGTCTAAGATCGA
513 CTTAGGCATACAGAGTTCATT-CCCAGTCTAAGCATACGAAGTTCATT-CCCAGTCTAAGATCGA
* ** *
6369278 TCAGACCGAGGGTTGGGAGCAGCCACATGCTGGGCCTCGGGCATGTGCTGGTGCCGCATTTTTCT
576 ACAGACCGAGGGTTACG-GCAG-CACATGCTGGG-CT-GAGCATGTGCTGGTGCCGCATTTTTCT
* ** * *** * * * *
6369343 TC-GCCAGGCATCATTGCCGGGAGCATCGCCGGAGAACCTAACCGACGGCATCGGGGTTGCGGA-
637 TCATCGGGGCACCATCATC-GGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTT-CCGAC
* * *
6369406 GATC-GGGGGCCGGGGGGGTGTGTGCACATGATATGCGATGGG-GCTTGATACTTGGCCCTTATA
700 GATCGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGC-TGGTACTTGGCCCTTATA
6369469 TTGGCCCCCTATCCCTCATC-AACC-CGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
764 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * *
6369532 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTAAAATGGGGACACTTTTTTCAAATGGTAACAAA
829 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
6369597 ATCT
894 ATCT
* * * *
6369601 TCTACACTTCGAGTTTTTAGCTGAATTTTTTTTTTCATGCCAACAAAAATACAAGGATCATGTCT
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * *
6369666 ACCAAGTTTGGGGCCAAAACCCCTTCTGAAAAAATTTTAAAAAATCGCGAACCGTAAAAA-TTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
* * * *
6369730 CAAAAATCGTGAAAAATAGAAAAAGACTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
131 -GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * * ** *
6369795 CCATTGTATGAATTTACAAGCCTTAAAAATAGCATTGGAACCCAGAAATATGAAGATGTGCCTAA
195 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAA
* * * * * *
6369860 ACCCACCTATCACCCTATCGATCCAAGACTTTCGCATCCGGTCTCTCTGGCCGACGTAGTGCCCG
260 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* *
6369925 CCCGCTCGCCCGCCTGTTCGTTTCGTCGGTTGGCTTAGGCATACGGATTTCATTCCCAGTCTAAG
325 CCCGCCCGCCCG-C---TCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * * *
6369990 ATCGGACCGGACCGTGGGTTGCGGTAGCAGCATCGGCAACACGTAGAGGGGGACCCGACCGATCC
386 ATCGGACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCC
* * * * * **
6370055 CCAGCTTGCGCATCCCGCCCTTC-GGACGGCTGAGCGCCTGCACGCTCATTTAATGGGTTGACTT
451 CCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
* * * *
6370119 AGGCATAC-GTAGTTCATTCCCCGTCTAAGCATACGTAGTTCATTCCCAGCCTAAGATCGGACCA
516 AGGCATACAG-AGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GAACA
* * * * * * *
6370183 GACCAAAGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCAGTAGTTTTCTTCATCG
579 GACCGAGGGTTACGGCAGCACATGCTGGGCTGA-GCATGTGCTGGTGCCGCATTTTTCTTCATCG
* * * *
6370248 GGG------CA-C----CATCGTCGGAGAACTTGACCGACGGTATTAGGATTCCGACGATCGGGG
643 GGGCACCATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGG
* * * * * *
6370302 GGGCTGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTAGTAATTGGCCCTTATATTGGCCCCT
708 GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* * * * *
6370367 TATACCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCGTTTGAGATTTTTCAGGTTTGT
773 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
** *
6370432 TGAAAGTAGCCAATAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
838 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * *
6370492 TGTACACTTTGACTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATGCAAGGATCACGTCT
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * * *
6370557 ACCAGGTTTGGGACCAAAACTCCATCCGAAAAAATTTT-AAAAATCCAGAACC-TCAAAAAGTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGT-AAAAAGTTT
* *
6370620 TGAAAATCAAGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
130 TGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* * *
6370685 CCATAGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCAAA
195 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAA
* * * * *
6370750 ACCCACCTACCACCCTATCGATCGACGGCCTGCGCATCCCATCTCTCTAGCCGGCGTAGTTCCCG
260 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCG
* * *
6370815 CCCG--CG--CACTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
325 CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCG
* ** * * * * * * **
6370876 GACCGAACAAAGGGTTGTGGTAGCAGGATCAGCAGCACGTAGAGGGGGACCCGGTCGATCCCCGG
390 GACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGG
* * * * ** *
6370941 CTTGCACATCCCGCCCCTCTGGCCGGTTGAGCACCTGCACGCTAATTTCGTAGGTTGACTTAGGC
455 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
* * *
6371006 ATACGGAGTTCATTCCCTGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCG
520 ATACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GAACAGACCG
* * * * ** *
6371071 AGGGTTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGT-TCGTATTTTTCTTCGCCGGAGCA
584 AGGGTTACGGCAGCACATGCTGGGCTGA-GCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCA
* * * *
6371135 CCATCGTCGGAGCATCGTTGGAGAACCTGACCGAAGGCATTGGGGTTCCGGCGATCGGGGGGGCC
648 CCATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGGGCC
*
6371200 -GGGGGGTGTGCGCACATGATGTGCGAAGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
712 GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATC
*
6371264 CCTCATCAAACCTCGAGAACTCACA-CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTTGCTAC
777 CCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG-TTTGCTGC
*
6371328 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATTGTCACAAAATCT
841 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * * *
6371385 TGTACACTTCAATTTTTTAGCTAAATGTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCT
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* *
6371450 ACCAAGTTTGGGGCAAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGCAAAAAGTTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
* * *
6371515 GAAAATCATGAAAAATTGAAAACAAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
131 GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
*
6371580 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAAAAATATGAAGATGTGCCTAAA
196 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
* * * * *
6371645 CCCACCTACCACCCTATCGATCCATGGCTTGCACATCCCATCTCTCTGGCCGACGTAGAGCCCGC
261 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC
* * ** *
6371710 CCGCCCGTCCAGCCACTCTTTTCGTCGGTCAGCTTAGGCATAGGGAGTTCATTCCCAGTCTAAGA
326 CCGCCCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * * * * * * *
6371775 TCGGACCAGACCGATGGTTGCAGCAGCATGATCGGTAGCACGTAGAGGGGGACCTGACCGATCCT
387 TCGGACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCC
* * * * * *
6371840 CGACTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGTACACTCATTTCGTGGGTTGACTTA
452 CGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTA
* * * * * *
6371905 GGCATACAGAATTCATTCCCAGTCTAAGCATACGAAGTTCATCCCCAGTCCAAGATTGGACTGGA
517 GGCATACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGAAC-AGA
* * * ***
6371970 GCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTTGCCGGG
581 CCGAGGGTTACGGCAGCACATGCTGGGCTGA-GCATGTGCTGGTGCCGCATTTTTCTTCATCGGG
* ** * * * * *
6372035 GCACCATCATCGAAGCATCGTTAGAGAACCTGACTGGCGGCATTGTGGTTTCGATGATCAGGGGG
645 GCACCATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GGGGG
*
6372100 GCCGGGAGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGCACTTGGCCCTTATATTGGCC
709 GCC----GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* *
6372165 CCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTT
770 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
6372230 TGCTGCCAGTAGCCATTAAAATGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
835 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
** *
6372293 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCA
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * *
6372358 ACCAAGTTTAGGGCCAGAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
* * *
6372423 GAAAATAATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGAC
131 GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
6372488 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
196 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
* * * *
6372553 CCCACTTATCACCCTATGGATCCACGGCTTGCGCAACCCGTCTCTCTGGCCGGCGTAGTGCCCGC
261 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC
6372618 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
326 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * *
6372683 ACCGGACCAAGGGTTGCGGCAGAAGGATCGGTGGCACCCAGAGGGGGACACGGCCGATCCCCGGC
391 ACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGGC
* *
6372748 TTCCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTG-CTTAGGCA
456 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
* *
6372812 TATAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGAACTAGACCAA
521 TACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGAAC-AGACCGA
* * *
6372877 GGGTTACAGCAGCACATGCTGGGCTGAGCATGCGCTGGTGCCGCATTTTTTTTCATCGGGGCACC
585 GGGTTACGGCAGCACATGCTGGGCTGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACC
* * * * * * * ** * *
6372942 ATCATCGCAGCATTGTCGGAGAACTTGACCGGCAGCATTGGGATTCTGGTGATCGGCGGGTCGGG
650 ATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGG
* *
6373007 GGGGTGTGTGCACATCATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
715 GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCT
* * *
6373072 CATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTTCCAAT
780 CATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGT
*
6373137 AGCCATTAAAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCT
845 AGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
** *
6373190 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCA
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * *
6373255 ACCAAGTTTAGGGCCAGAACTCCTTTCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
* * *
6373320 GAAAATAATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGAC
131 GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
6373385 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
196 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
* * * *
6373450 CCCACTTATCACCCTATGGATCCACGGCTTGCGCAACCCGTCTCTCTGGCCGGCGTAGTGCCCGC
261 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC
6373515 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
326 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * *
6373580 ACCGGACCAAGGGTTGCGGCAGAAGGATCGGTGGCACCCAGAGGGGGACACGGCCGATCCCCGGC
391 ACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGGC
* *
6373645 TTCCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTGACTTAGGCA
456 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
* *
6373710 TATAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCCAGTCTAAGATCGAACTAGACCA
521 TACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATT-CCCAGTCTAAGATCGAAC-AGACCG
* * * *
6373775 AGGGTTACAGCAGCACATGCTGGGCTGAGCATGCGCTGGTGCCGCATTTTTTTTAATCGGGGCAC
584 AGGGTTACGGCAGCACATGCTGGGCTGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCAC
* * * * * * * ** * *
6373840 CATCATCGCAGCATTGTCGGAGAACTTGACCGGCAGCATTGGGATTCTGGTGATCGGCGGGTCGG
649 CATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGG
* *
6373905 GGGGGTGTGTGCACATCATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
714 GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
* * *
6373970 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTTCCAA
779 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
*
6374035 TAGCCATTAAAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCT
844 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * *
6374089 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAACAAAAGTCCAAGGATCACGTCT
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* *
6374154 ACCAAGTTTGGGGCAAAAAATCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
6374219 GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
131 GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
* * *
6374284 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAAGTAGAAATATGAAGATGTGCCTAAA
196 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
* * *
6374349 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCTGTCTCCCTGGCC-G-GT-GT-----A
261 CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC
* * * * * * * *
6374406 ACGTCCGCCCGCTCGTTTCGTCGGTTGCCTTAGGCTTATGGAGTTCATTCCTAGCCTAAGATTGG
326 CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * * ** * *
6374471 ACTGGATCGAGGGTTGTGGTAGTAGGATCATTAGCACGCAGAGGGTGACCCGACTGATCCCCGGC
391 ACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGGC
* * *
6374536 TTGCGCATCCCACCCCTCTGGCCGGCTGAACGCCCGCACGCTCGTTTCGTGGGTTAACTTAGGCA
456 TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
* * * *
6374601 TACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGATCGGACCGA
521 TACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATC-GAACAGACCGA
* * * * * *
6374666 TGGTTACGGTAGCACATGCTAGGCTCGGGCATGCGCTGGTGCCGCATTTTTCTTCGTCGGGGCAC
585 GGGTTACGGCAGCACATGCTGGGCT-GAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCAC
** * * * *
6374731 CATCGCCGGAGCATTGTTGGAGAACCTGACCGACGGCATTGGGGTTCCGACGGTCGGGGGG--TG
649 CATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGG
*
6374794 GGGGGTGTACGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
714 GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCC
*
6374859 TCATCAAACCTTGAGAACTCACACCCCCTTAAA-AGGCATTTGAGATTTTACAGGTTTGCTGCCA
779 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGA-GCATTTGAGATTTTACAGGTTTGCTGCCA
6374923 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
843 GTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
* * * * * *
6374978 TATACACTTCGAGTTTTTAGCTGAGTTGTTTTATGCAAGCCAACAAAAATACTAGGATCACGTCT
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* *
6375043 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA-CCCTGAACTGCAAAAAGTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCC-GAACCGTAAAAAGTTT
* * *
6375107 TAAAAATCGTGAAAAATAGAAAACGAGTCGTTTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
130 TGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* ** *
6375172 CCATTGTGTGAATTTACAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAA
195 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAA
* * * *
6375237 ACCCACCTACCACCCTATCGATCCGCGGCTTGTGCATCCCGTTTCTCTGGCCAG-GTAGTGCTGG
260 ACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA--G-T-G
* * * * *
6375301 CCCGCCCACCCACCCGCTCGTTTCGTTGGTTGGCTTAGGCATACGAAGTTCATTCCCAGTCTAAT
321 CCCGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * * * * ***
6375366 TTCAGACTGGATCGAGGGTTGCAGCA-ACGAGATCGGTAGCACGTAGAGGGGGACCCGGTTGATC
386 ATCGGACCGGACCGAGGGTTGCGGCAGAAG-GATCGGTAGCACGCAGAGGGGGACCCGACCGATC
* *
6375430 CCCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTTGTGGGTTGACT
450 CCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
* * * *
6375495 TAAGCATACAGAGTTCATTCCCAGTCTAAGCATAC-AGAGTTCATTCGCAATCTAAGATCAGATC
515 TAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGA-AGTTCATTCCCAGTCTAAGATC-GAAC
* * * ** *
6375559 -GAATCGAGGGTTACGGTAGCACATGCTGGGCTGGGGCATGTGCTGGTTACGCATTTTTCTTCGT
578 AG-ACCGAGGGTTACGGCAGCACATGCTGGGCT-GAGCATGTGCTGGTGCCGCATTTTTCTTCAT
* * * * *
6375623 TGGGGCAGC-TCACCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGCTCCGATGATCGG
641 CGGGGCACCATCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-G
*
6375687 GGGGGCC----AGG-G-G-G----TGATGTGCGATGGGTGCTGGTACCTTGGCCCTTATATTGGC
705 GGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA-CTTGGCCCTTATATTGGC
** * * *
6375741 CCTTTATCTCCTCATGAAAACCTCCGAGAATTCACACCCCCATAAAGAGCATTTTGAGATTTATT
769 CCCCTATC-CCTCAT-CAAACCT-CGAGAACTCACACCCCCTTAAAGAGCA-TTTGAGA-TT-TT
* * * * *
6375806 AAACAGGTTTGCTGCCAGTAGCCATT-AAGTGTTTTGGAGTGGGGAACACTTTTCTCCAATTGGT
828 --ACAGGTTTGCTGCCAGTAGCCATTAAAGTG-TCTGAAATGGGG-ACACTTTT-TTCAAATGGT
6375870 CACAAAAATCT
888 CAC-AAAATCT
* * *
6375881 TATACACTTCGAGCTTTTTAGTTGAATTTTTTTGTTGCATGCCAAAAAAAATACAATGGATCACG
1 TGTACACTTCGAG-TTTTTAGCTGAATTTTTTTG-TGCATGCCAACAAAAATACAA-GGATCACG
* * * *
6375946 TTTACCAAGTTAGGAGCC-AAA-GCCTTCC-AAAAAATTTT-AAAAATCCCGAACC--ACAAAAG
63 TCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTA-AAAAG
** * * * * *
6376005 TTTCAAAAATCGTGAAAACTAGAAAAACGAGCCGTCCTTGCCCAATGACAACTTAACGTGCAGGC
127 TTTTGAAAATCATGAAAAATAG-AAAACGAGTCGT-CTTG-CC-ATGA-AACTTCACGTGAAGGC
* *
6376070 TTAAGGGACCATCTGGTATG-ATTTAACCAGCCAT-AAAATGGCATTTGGCA-CCACAGAAATAT
187 TTAAGGGACCAT-T-GTATGAATTT-ACAAGCCATAAAAATGGCA-TTGGCATGCA-A-AAATAT
* * * *
6376132 GAAGATGTGCCTAAACCCATCTGCCACCCTATCGATCCACAGCTTGCGCATCCCGTCTCTATGGC
246 GAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGC
* *
6376197 CGACGTAGTGCCCGCCCGCCTACCCCGCTGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
311 CGGCGTAGTGCCCGCCCGCC--CGCC-C-GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
* * * * * * *
6376262 ATTCCCAATCTAAGATCGGATCAGACCGATGGTTACGGCA-ACAGGATCGATAGCACACAGAGGG
372 ATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGCGGCAGA-AGGATCGGTAGCACGCAGAGGG
* * ** * * * * * *
6376326 GGACCTGATCGATCCCCAACTTGTGCATCCCACCCCTATGGCCGGCTAAACGCCCGCATGCTCGT
436 GGACCCGACCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGT
* * * * *
6376391 TTCGTGGGTTGGCTTAGGCATACAGAGTTCAATCCCAGTCTAAGCATATGGAGTTCATTCCCAGA
501 TTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGT
* * * * * * *
6376456 CTAAGATCGGACCGAAACAAGGGTTACAGCAGCACATGCTTGGCTCTG-GCATGTGCTGGTGTCG
566 CTAAGATCGAACAG-ACCGAGGGTTACGGCAGCACATGC-TGG-GCTGAGCATGTGCTGGTGCCG
* * * * * *
6376520 CATTTTTCTTCATCGAGGCACCATTACCGGAGCATCG-CTGGAGAACCTGACAGACGACATTAGG
628 CATTTTTCTTCATCGGGGCACCATCATCGGAGCATCGTC-GGAGAACCTGACCGACGGCATTGGG
*
6376584 GTTTCGACGATCGGGGGGCCGGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
692 GTTCCGACGATCGGGGGGCC-GGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGG
*
6376649 CCCTTATATTGGCCCCCTATACCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
756 CCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTG
*
6376714 AGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA-ACTTTTTTCAAATG
821 AGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATG
* *
6376778 GTTACAAAA-GT
886 GTCACAAAATCT
*
6376789 TGTACACTTCGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
1 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
* * * * *
6376854 ACCAAGTTTGGGGCCAAAACTCCTTTCGAAAAAATTTGAAAAAATCCTGAATCGCAAAAAGTTTT
66 ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
* * * *
6376919 GAAAATCATAAAAAATTGAAAATGAGTCATCTTGCCATGAAACTT
131 GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
6376964 ATGCCACGAC
Statistics
Matches: 6530, Mismatches: 693, Indels: 274
0.87 0.09 0.04
Matches are distributed among these distances:
882 135 0.02
883 137 0.02
884 1 0.00
885 1 0.00
886 1 0.00
887 3 0.00
888 39 0.01
889 527 0.08
890 241 0.04
891 505 0.08
892 52 0.01
893 278 0.04
894 218 0.03
895 23 0.00
896 12 0.00
897 692 0.11
898 52 0.01
899 989 0.15
900 332 0.05
901 58 0.01
902 389 0.06
903 243 0.04
904 185 0.03
905 61 0.01
906 98 0.02
907 147 0.02
908 499 0.08
909 122 0.02
910 296 0.05
911 56 0.01
912 3 0.00
913 32 0.00
914 5 0.00
915 4 0.00
916 3 0.00
917 8 0.00
918 26 0.00
919 6 0.00
920 6 0.00
921 23 0.00
922 22 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (897 bp):
TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
ACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTT
GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGAC
CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAA
CCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGC
CCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
ACCGGACCGAGGGTTGCGGCAGAAGGATCGGTAGCACGCAGAGGGGGACCCGACCGATCCCCGGC
TTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCA
TACAGAGTTCATTCCCAGTCTAAGCATACGAAGTTCATTCCCAGTCTAAGATCGAACAGACCGAG
GGTTACGGCAGCACATGCTGGGCTGAGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCA
TCATCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGCCGGGG
GGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCT
Found at i:6374634 original size:26 final size:26
Alignment explanation
Indices: 6374598--6374650 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6374588 GTTAACTTAG
6374598 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6374624 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6374650 G
1 G
6374651 ATCAGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6375531 original size:26 final size:26
Alignment explanation
Indices: 6375495--6375550 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
6375485 TGGGTTGACT
*
6375495 TAAGCATACAGAGTTCATTCCCAGTC
1 TAAGCATACAGAGTTCATTCCCAATC
*
6375521 TAAGCATACAGAGTTCATTCGCAATC
1 TAAGCATACAGAGTTCATTCCCAATC
6375547 TAAG
1 TAAG
6375551 ATCAGATCGA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.34, C:0.23, G:0.16, T:0.27
Consensus pattern (26 bp):
TAAGCATACAGAGTTCATTCCCAATC
Found at i:6376437 original size:26 final size:26
Alignment explanation
Indices: 6376408--6376460 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
6376398 GTTGGCTTAG
*
6376408 GCATACAGAGTTCAATCCCAGTCTAA
1 GCATACAGAGTTCAATCCCAGACTAA
** *
6376434 GCATATGGAGTTCATTCCCAGACTAA
1 GCATACAGAGTTCAATCCCAGACTAA
6376460 G
1 G
6376461 ATCGGACCGA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.32, C:0.25, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTTCAATCCCAGACTAA
Found at i:6379007 original size:26 final size:26
Alignment explanation
Indices: 6378971--6379023 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6378961 GTTGACTTAG
*
6378971 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6378997 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6379023 G
1 G
6379024 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6382471 original size:26 final size:26
Alignment explanation
Indices: 6382435--6382487 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6382425 GTTGACTTAG
6382435 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6382461 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6382487 G
1 G
6382488 TTCGGACTGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6382927 original size:835 final size:843
Alignment explanation
Indices: 6379508--6382929 Score: 3266
Period size: 835 Copynumber: 4.0 Consensus size: 843
6379498 AAAACGAGCC
*
6379508 ATCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
1 ATCTTGCCAT-AAACTTAACGTGAAGGCTTAAGGGACCATTGAATGAATTTACAAGCCATAAAAA
* * **
6379573 TGGCATTGGCACACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
65 TGGCATTGGCACACAAAAA-ATGAAGATATGCCCAAACCCACCTACCACCCTATCGATCCACAAC
* * ** * *
6379638 TTGCGCATCCCGTCTCTCTGACCGACGCAGTGCCCGCCCGCCCACCCGCTCATTTCGTCG-GTTG
129 TTGCGCATCCCGTCTCTCTGGCCAACATAGTG-CCGCCGGCCCGCCCGCTC---TCGTCGCG-T-
* * * * * *
6379702 GCTTAGGCATACGGAGTTCATTCTCAGTCTAAGATTGGACCGGACCGAGGGTT-CTGACAGCAGG
188 G-TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGATTAC-GACAGCAAG
* * * * * * * * * *
6379766 ATCGGCAGCACGTAGAGGGGGAACCGACCGATCCCCAGCTTGCACATCCCACCCCTCTGG-TGGA
251 ATTGGCAGCACATAAAGAGGGACCCGACCGATCCCCGGCTTGCGCATCTCACCACTCTGGCCGG-
* *** * * * *
6379830 CTGAGCTTTCGCACGCTCGTTTTGTGGGTTGACTTACGCATACGGAGTTCATTCCCAGTTTAAGC
315 CTAAGCGCCCGCACGCTCGTTTTGGGGGTTGAATTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * ** * * * *
6379895 ATACAGAGTTCATTCCCAG--TAAGATCT-GACCGAAACGATGGTTACGGTAGCACATGCTGGGC
380 ACACGGAGTTCATTCCCAGTCTAAGAT-TGGATGGGACCGAAGGTTACGGCAGCACATGCTGGGC
* * * ** **
6379957 TCGGGCATGTGCTGGTGCCTCAATTTTCTTCACTGG-GCACCATCACTGGAGCATCGTCGGAGAA
444 TCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGAGCACCATCACCAGAGCATCACCGGAGAA
* *
6380021 CCTGACCGACGGCATTGGGGTTCTGACGATC-GGGGGGTC-G-GGGGGTGTGCGCACATGATGTG
509 CCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGAGGGGGTGTGCGCACATGATGTG
* * *
6380083 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTACCCCTCATCAAACCTCGAGAACTCAC
574 CAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGAGAACTCAC
* * * * * * * *
6380148 ACCGCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTATAGTGTTTGAAAT
639 ACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCTACCAGTAGACATTAAAGTGTCTAAAAT
* * * *
6380213 GGGCACACATTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAAT-ATTTTG
704 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGTTTTTG
* * *
6380277 TGCATGCTAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACAAAAACTCCTTCTGGAAAA
769 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACAAAAACTCCTTCCGAAAAA
6380342 ATTTGAAAAA
834 ATTTGAAAAA
* * ** ** * * *
6380352 ATCTTG-----AAC----CG-CAA-----AAAGTTCCA-AAAAT-CA-TGA-AA--AATAGAAAA
1 ATCTTGCCATAAACTTAACGTGAAGGCTTAAGGGACCATTGAATGAATTTACAAGCCATA-AAAA
* * ** * *
6380396 TGAGTCATCTTGC-CATGAAACTTCATGTGAAGATGTGCCTAAACCCACCTACCACCCTATCGAT
65 TG-G-CAT-TGGCACA-CAAA----AAATGAAGATATGCCCAAACCCACCTACCACCCTATCGAT
** * * * * * * *
6380460 CCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAATGCCCACCCGCCCGTCCGCCCACTCGTT
122 CCACAACTTGCGCATCCCGTCTCTCTGGCCAACATAGTG-CCGCCGGCCCG-CC-CGCTCTCG--
* * * *
6380525 TCGTCGGTTGGCTTAGGCATACGAAGTTCATTCTCAGTCTAAGATCGGACCGGA-CTGAGGGTTA
182 TCG-C-G-T-G-TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATC-GAGGATTA
* ** * *** * * * * * * * *
6380589 TGGTAGCAAGATAGGCAGCATGCAGAGGGGGACTCGATCGATCCCCGGCTTGCACATCCCGCCCC
241 CGACAGCAAGATTGGCAGCACATAAAGAGGGACCCGACCGATCCCCGGCTTGCGCATCTCACCAC
* * ** * * *
6380654 TCTGGCCGACTGAGCTTCCGTACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
306 TCTGGCCGGCTAAGCGCCCGCACGCTCGTTTTGGGGGTTGAATTAGGCATACGGAGTTCATTCCC
* * * * * *** * *
6380719 AGTTTAAGCATACGGAGTTCATTCCCATTCTAAGATCGAACCAGACCGAGGGTTACGGTAGCACA
371 AGTCTAAGCACACGGAGTTCATTCCCAGTCTAAGATTGGATGGGACCGAAGGTTACGGCAGCACA
* *** ** * *
6380784 TGCTGGGCTCGGGCATGTGTTGGTGCCACATTTTTCTTTGTCGG-GCACCATCGTCGGAGCATCG
436 TGCTGGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCACCGGAGCACCATCACCAGAGCATCA
* * * *
6380848 TCGGAGAACCTGACCGGCGGTATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGGTGTGCGCAG
501 CCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGAGGGGGTGTGCGCAC
* * * * *
6380912 AAGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCACATCAAACCTCAA
566 ATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGA
* * * * * * *
6380977 GAACTCACACCCCCTTAAAGAGCATCTAAGATTTTATAGGTTTGCTACTAGTAGCCATTAAAGTG
631 GAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCTACCAGTAGACATTAAAGTG
* * * *
6381042 TCTGAAATGGGGATACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTCAA
696 TCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAA
* * * * *
6381107 TTTTTTTGTGCATGCCAACAAAAATACAAGGATCACATCTTACTAAGTTTGGGGCTAAAACTCCT
761 TGTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTC-TACCAAGTTTGGGACAAAAACTCCT
* * *
6381172 TTC--AAAATTTTTAAAAA
825 TCCGAAAAAATTTGAAAAA
** * * *** * ** * * *
6381189 ATCCCGACCATAAAAAGTTTCAAAGATCATGAAAAATAGAAAACGAGTCATCTTGCCATTAACTT
1 ATCTTG-CCAT--AAA-CTT---A-A-CGTGAAGGCT--TAAGGGA-CCA--TTG-AATGAA-TT
6381254 CACGTGAAGGCTTAAGGGACCATTGAATGGATTTACAAGCCATAAAAATGGCATTGGCACACAAA
50 ----T--A--C--AA--G-CC---------A--T---A------AAAATGGCATTGGCACACAAA
* ** *
6381319 AAATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTC
82 AAATGAAGATATGCCCAAACCCACCTACCACCCTATCGATCCACAACTTGCGCATCCCGTCTCTC
* *
6381384 TGGCCAACATTGTGCCTGCCGGCCCGCCCGCCTGCTCGTTTCGTCGGTTGGCTTAGGCATAGGGA
147 TGGCCAACATAGTGCC-GCCGGCCCGCCCG-CT-CTCG--TCG-C-G-T-G-TTAGGCATACGGA
* * ** *
6381449 GTTCATTCCTAGTCTAAGATCGGACCAGATCGAGGATTACGACAGTAAGATTGGCAGCAGGTAGA
202 GTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGATTACGACAGCAAGATTGGCAGCACATAAA
* * *
6381514 GAGGGACCCGACCGATCCCGGGCTTGCGCATCTCACCCCTCTGGCCGGCTGAGCGCCCGCACGCT
267 GAGGGACCCGACCGATCCCCGGCTTGCGCATCTCACCACTCTGGCCGGCTAAGCGCCCGCACGCT
**
6381579 CGTTTTGGGGGTTGAATTAGGCATACGGAGTTCATTCCCAGTCTAAGCACACGGAGTTCATTCTT
332 CGTTTTGGGGGTTGAATTAGGCATACGGAGTTCATTCCCAGTCTAAGCACACGGAGTTCATTCCC
* * * * *
6381644 AGTCTAAGATTGGATGGGACTGAGGGTTACGGCAGCACATGCTTGGCTCGGGCTTGTTCTGGTGC
397 AGTCTAAGATTGGATGGGACCGAAGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGC
* * * *
6381709 CACATTTTTTTTCACCGGAGCACCATCATCAGTGCATCATCGGAGAACCTGACCGACGGCATTGG
462 CACATTTTTCTTCACCGGAGCACCATCACCAGAGCATCACCGGAGAACCTGACCGACGGCATTGG
* *
6381774 GGTTCCGACGATCGGTGTGGCCGGAGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTT
527 GGTTCCGACGATCGGGGGGGCCGGAGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTT
*
6381839 GGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGAGAACTCACACCCCCTTAAAGAGCATT
592 GGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGAGAACTCACACCCCCTTAAAAAGCATT
* *
6381904 TGAGATTTTACAGGTTTGCTACCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAA
657 TGAGATTTTACAGGTTTCCTACCAGTAGACATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAA
*
6381969 TGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATA
722 TGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACAAAAATA
** * * *
6382034 CAAGGATCACGTCTACCAAGTTTGGGACAAAAACTGTTTCTGGAAAAATTTTAAAAA
787 CAAGGATCACGTCTACCAAGTTTGGGACAAAAACTCCTTCCGAAAAAATTTGAAAAA
*
6382091 ATCTTGCCATGAAACTTAACGTGAAGGCTTAAGGGGGACCATTGTATGAATTTACAAGCCATAAA
1 ATCTTGCCAT-AAACTTAACGTGAAGGCTTAA--GGGACCATTGAATGAATTTACAAGCCATAAA
** * *
6382156 AATGGCATTGGCATGCAGAAATATGAAGATGTGCCCAAACCCACCTACCACCCTATCGATCCACA
63 AATGGCATTGGCACACA-AAAAATGAAGATATGCCCAAACCCACCTACCACCCTATCGATCCACA
* * * * ** *
6382221 ACTTGCGCGTCCCGTCTTTTTGGTCGGCGTAGTG-C-CC-GCCCGCCCG-T-T-G-C-C-T-TT-
127 ACTTGCGCATCCCGTCTCTCTGGCCAACATAGTGCCGCCGGCCCGCCCGCTCTCGTCGCGTGTTA
* * *
6382275 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CTGAGGGTTACGGCAGCAAGGTTGG
192 GGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATC-GAGGATTACGACAGCAAGATTGG
* * * *
6382339 CAGCACATAAAGGGGGACCTGATCGATCCCCGGCTTGCGCATC-CTGCCACTCTGGCCGGCTAAG
256 CAGCACATAAAGAGGGACCCGACCGATCCCCGGCTTGCGCATCTC-ACCACTCTGGCCGGCTAAG
* * * *
6382403 CGCCTGCACGCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACG
320 CGCCCGCACGCTCGTTTTGGGGGTTGAATTAGGCATACGGAGTTCATTCCCAGTCTAAGCACACG
**
6382468 GAGTTCATTCCCAGTCTAAG-TTCGGACT-GGACCGAAGGTTGTGGCAGCACATGCTGGGCTCGG
385 GAGTTCATTCCCAGTCTAAGATT-GGA-TGGGACCGAAGGTTACGGCAGCACATGCTGGGCTCGG
* *
6382531 GCATGTGCTGGTGCCACATTTTTCTTCATCGTG-GCACCATCACCGGAGCATCACCGGAGAACCT
448 GCATGTGCTGGTGCCACATTTTTCTTCACCG-GAGCACCATCACCAGAGCATCACCGGAGAACCT
* * *
6382595 GACCGGCGGCATTGGGGTTTCGACGATCGGGGGGGCCGG-GGGGGTGTGCGCACATGATGTGCGA
512 GACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGAGGGGGTGTGCGCACATGATGTGCAA
*
6382659 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
577 TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGAGAACTCACACC
* *
6382724 CCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGACATTAAAGTGTGTAAAATGGG
642 CCCTTAAAAAGCATTTGAGATTTTACAGGTTTCCTACCAGTAGACATTAAAGTGTCTAAAATGGG
*
6382789 GACACTTTTTTCTAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGTTTTTAG-G
707 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGTTTTT-GTG
* * *
6382853 CATGCCACCAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAAT
771 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGACAAAAACTCCTTCCGAAAAAAT
6382918 TTGAAAAA
836 TTGAAAAA
6382926 ATCT
1 ATCT
6382930 CGAACCGCAA
Statistics
Matches: 2183, Mismatches: 282, Indels: 235
0.81 0.10 0.09
Matches are distributed among these distances:
822 3 0.00
823 6 0.00
824 3 0.00
825 7 0.00
826 7 0.00
827 2 0.00
828 9 0.00
829 83 0.04
830 6 0.00
831 3 0.00
832 1 0.00
833 192 0.09
834 3 0.00
835 399 0.18
836 317 0.15
837 214 0.10
838 37 0.02
839 23 0.01
840 1 0.00
843 1 0.00
844 6 0.00
845 3 0.00
848 1 0.00
849 1 0.00
851 1 0.00
853 9 0.00
854 2 0.00
855 1 0.00
856 20 0.01
857 67 0.03
862 1 0.00
863 3 0.00
864 2 0.00
865 1 0.00
867 1 0.00
868 2 0.00
869 1 0.00
871 1 0.00
876 2 0.00
877 2 0.00
879 2 0.00
881 1 0.00
882 2 0.00
883 1 0.00
885 1 0.00
889 2 0.00
890 4 0.00
891 3 0.00
892 2 0.00
893 2 0.00
894 8 0.00
895 1 0.00
896 2 0.00
897 1 0.00
898 6 0.00
899 341 0.16
900 87 0.04
901 238 0.11
902 17 0.01
903 6 0.00
904 5 0.00
905 1 0.00
906 6 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (843 bp):
ATCTTGCCATAAACTTAACGTGAAGGCTTAAGGGACCATTGAATGAATTTACAAGCCATAAAAAT
GGCATTGGCACACAAAAAATGAAGATATGCCCAAACCCACCTACCACCCTATCGATCCACAACTT
GCGCATCCCGTCTCTCTGGCCAACATAGTGCCGCCGGCCCGCCCGCTCTCGTCGCGTGTTAGGCA
TACGGAGTTCATTCCCAGTCTAAGATCGGACCAGATCGAGGATTACGACAGCAAGATTGGCAGCA
CATAAAGAGGGACCCGACCGATCCCCGGCTTGCGCATCTCACCACTCTGGCCGGCTAAGCGCCCG
CACGCTCGTTTTGGGGGTTGAATTAGGCATACGGAGTTCATTCCCAGTCTAAGCACACGGAGTTC
ATTCCCAGTCTAAGATTGGATGGGACCGAAGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGC
TGGTGCCACATTTTTCTTCACCGGAGCACCATCACCAGAGCATCACCGGAGAACCTGACCGACGG
CATTGGGGTTCCGACGATCGGGGGGGCCGGAGGGGGTGTGCGCACATGATGTGCAATGGGTGCTG
GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATAAAACCTCGAGAACTCACACCCCCTTAAAA
AGCATTTGAGATTTTACAGGTTTCCTACCAGTAGACATTAAAGTGTCTAAAATGGGGACACTTTT
TTCAAATGGTCACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATGTTTTTGTGCATGCCAACA
AAAATACAAGGATCACGTCTACCAAGTTTGGGACAAAAACTCCTTCCGAAAAAATTTGAAAAA
Found at i:6385437 original size:848 final size:868
Alignment explanation
Indices: 6383361--6388322 Score: 4888
Period size: 848 Copynumber: 5.6 Consensus size: 868
6383351 AGAAGTTTTA
* * *
6383361 AAAATCGTGAAAAAAAGAAAACGAGTCGTCTTGCCATCAAACTTCACGTCAAGGCTTAAGGGACC
1 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* * *
6383426 ATTGTATGATTTTACAAGCCATAAAAGTGGCATTGGCATGCAGAAATATGATGATGTGCCT-AAC
66 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
* * ** *
6383490 CCACCTACCACACTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGTCGGCAAAGTGCCCACC
131 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCC
* * *
6383555 CGCCCGC-CTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGA
196 CGCCCGCAC-ACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * ** * * *
6383619 TCAGACCGGACCA-AGGGGTGCGGCAGCAAGATCGGTAGCATGCAGAGGAGGACCCGGCTGATCC
260 TCAGACCGGA-CAGAGGGTTGC-ACAGCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGATCC
* * ** * *
6383683 TCGGCTTACGCATCCTGCCCCTCTGGCCGGCTGAGCATCCGTACGCTCGTTTCGTGGGTTGA-TG
323 TCGGCTTAAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACT-
* * * * * **
6383747 TAGGCATA-AGGAGTTCATT-CCAGTCCAGGCATACGGAGTTCATTTCGAGAT-TAAAAAAAAGA
387 TAGGCATACA-GAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG-TCT-AAGATCAGA
* ** ** * * *
6383809 CCAGACTTAGGGTTGGGACAGCACATGTTGGGCTCAAGCATGTGCTGGTGCCGCATTTTTCGTCG
449 CCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCG
* * * *
6383874 T-TGGGGCACCATCATCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCCGGCGATC
514 TCT--GGCACCATC-GCGGAGCATCGCCGGAGAACCTGACTGACGG-TTTGGGGTT-CGGTGATC
*
6383938 GGGGGGGCCGAGGGAG-GTGTGCGCACATGATGTGC-ATTGGGTGCTAGTACTTGGCCCTTATAT
574 -GGGGGG--GAAGGAGTGT-TG-GCACATGATGTGCGA-T-GGTGCTAGTAC-TGGCCCTTATAT
*
6384001 TGGTCCCCTATCCTTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
631 TGG---CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTAC
*
6384066 AGGTTTTCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGA-AACTTTTTTCAAATGGTCACAAA
693 AGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAA-TTTTTTCAAATGGTCACAAA
* * * * *
6384130 ATCTTATAGACTTAAAGTTTTTAGGTTAATTTTTTTGTGCATACCAATAAAAATACAAGGATCAC
757 ATCTTGTACAC-T--AGTTTTTAGCTGAATTTTTTTGTGCATGCC---AAAAATACAAGGATCA-
* * *
6384195 ATCTACAAAGTTAGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCTCGAACTGCAAAAAG
815 GTCTAC-----CAGGGGCCAAAACTCCTT-------AA-TTTAAAAAATC-CCAACT--AAAAAG
6384260 TTTCG
864 TTTCG
*
6384265 AAAATGGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
1 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
*** *
6384330 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAAATATGAAGATGTGCATAAAC
66 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
* * *
6384395 CAACCTACCACCCTATCGATCCATGGCTTGCGCATCCTG-CATCTCTGG-CTGGCGTAGTGCCCG
131 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC-TCTCTGGTC-GGCGTAGTGCCCG
*** * * *
6384458 CCCGCCCAG-TTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGCTCATTCCCCGTCTAA
194 CCCGCCC-GCACACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *** * * * ****
6384522 GATCAGACTGGACTGAGGGTTGTGGTAGCAAGATCGGCAACACACAGAGGGGGACCCAATTGATC
258 GATCAGACCGGACAGAGGGTTG-CACAGCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGATC
* * * * * *
6384587 CTCAGCTTAAGCATCCCGCCCCTCTGGCTGGTTGAGCGCCTGCACGCTCATTTCATGGGCTGACT
322 CTCGGCTTAAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACT
* * *
6384652 TAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCGTTCCCAGTCGAAGATCAGACTG
387 TAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCG
* * * * * *
6384717 GACCGAGAGTTACGACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTAATTTTC-TGGTCT
452 GACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCT
* * ** *
6384781 GGCACCATCGCGGA-CATGGCCTAGAGAACCTGACTG-CGGTTTGGGGTTCTTTGATC-GTGGGG
517 GGCACCATCGCGGAGCATCGCC-GGAGAACCTGACTGACGGTTTGGGGTTCGGTGATCGGGGGGG
*
6384843 AAGGAGTGTTGGC-CATGACTGGTG-GAT-GTGCT-GTA-TGG-CTTTATATTGG-C-ATCCCTC
581 AAGGAGTGTTGGCACATGA-T-GTGCGATGGTGCTAGTACTGGCCCTTATATTGGCCTATCCCTC
* * * * *
6384900 A-CAAA-ATTG-GAACTCACTCGCCCTTAAAGAGCATTTGAGA-TTTACAGGTGTCCTGCCAGTA
644 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTA
* * **
6384961 GCCATTTAAAG-GTCTG-AATGGGGACACACTTTTTCAAAT-CTCACAATGCTCTT-TA-A-T-G
709 GCCA-TTAAAGTGTCTGAAATGGGGACA-ATTTTTTCAAATGGTCACAA-AATCTTGTACACTAG
6385019 TTTTTAGCTGAATTTTTTTGTGCATGCCAAAAATACAAGGATCA-TCTACCAGGGGCCAAAACTC
771 TTTTTAGCTGAATTTTTTTGTGCATGCCAAAAATACAAGGATCAGTCTACCAGGGGCCAAAACTC
* *
6385083 CTT-A-TTAAAAAATCCCGACTGAAAAGTTT-G
836 CTTAATTTAAAAAATCCCAACTAAAAAGTTTCG
* *
6385113 GAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
1 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
*
6385178 ATTGTTTGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
66 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
*
6385243 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTATCTCTGGTCGGCGTAGTGCCCGCC
131 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCC
*
6385308 CGCCCGCACACCCGCTCGTTTCGTCAGTTGGCTTAGGCATAAGGAGTTCATTCCCAGTCTAAGAT
196 CGCCCGCACACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
** * ** * * *
6385373 TGGATCGGACAGACGATTTGCACAACAGGATCCACAGCACGCAGAGGGGGACCCGGCCGATCCTC
261 CAGACCGGACAGA-GGGTTGCACAGCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCTC
* * * **
6385438 GGCTTACA-CATCCTGCCCCTCTGGCTGGCTGAGCGCCCGCACGCTCGTTTTATGGGTTGACTTA
325 GGCTTA-AGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTA
* **
6385502 GGGATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCGTAGTCTAAGATC-GAACCGG
389 GGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCGG
* * *
6385566 ACTA-AGGGTTACGGCAGCACATGCTGGGCTTGGGCATGTGCTGGTGCCGCATTTTTCTTCGT-T
453 AC-AGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCT
** ** * * * *
6385629 GG-GGCA-C-C--A-C--CGCCGGAGAACCAAACAGGCGGCATTGGGGTTCCGGCGATCTGAGGG
517 GGCACCATCGCGGAGCATCGCCGGAGAACCTGACTGACGG-TTTGGGGTT-CGGTGATC-G-GGG
* *
6385686 CCGGGAGAGGCGTG-T-GCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
578 --GGGA-AGGAGTGTTGGCACATGATGTGCGAT-GGTGCTAGTAC-TGGCCCTTATATTGG---C
* * *
6385749 CTGTCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACTGGTTTG
635 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTC
*
6385814 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAGTTTTTTCAAATGGTCACAAAATCTTGTA
700 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCTTGTA
* * *** *
6385879 CACTTCGAGTTTTTGGCTGAATTTTTTTGTACATATAAAAAAAAACACAAGGATCACGTCTACCA
765 CAC-T--AGTTTTTAGCTGAATTTTTTTGTGC--AT-GCCAAAAATACAAGGATCA-GTCTACC-
* * * *
6385944 AGTTTGGGGTCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCACTAAAAGTTTCA
822 A----GGGGCCAAAACTCCTT-------AA-TTTAAAAAATCC-CAACTA--AAAAGTTTCG
* * *
6386006 AAAATCATGAAAAATAAAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
1 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* *
6386071 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATTTGAAGATGTGCCTAAAC
66 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
* * * ** *
6386136 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTTTCTGGCCGATGTAGTGCCAGCC
131 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCC
* * * * *
6386201 CGCCCGTCTGCTCGCTCGTTCGTTTTGTCTGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
196 CGCCCG-C-ACAC-C-CGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * * *
6386266 AGATCAGACCGTATC-GAGGGTTCCAACCGCAAGATCGATAGCATGCAGAGGGGG-CCCTAGCCG
257 AGATCAGACCGGA-CAGAGGGTTGC-ACAGCAAGATCGACAGCACGCAGAGGGGGACCC-GGCCG
* * * *
6386329 ATCCCCGTCTTGCA-CATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTT
319 ATCCTCGGCTT-AAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTT
* * * *
6386393 GACTTAGACATACAGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAGGATCCG
383 GACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAG
* * * * * * *
6386458 ACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGAACATATGCTGGTGCCGCATTTTTCTTC
448 ACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTC
** * * * *
6386523 ACCGGGGCACCATCGCCGAAGCATCGTCGGAGAACCTGACTGAGGGCATTT-GGGTTCCGGTGAT
513 GTC-TGGCACCATCG-CGGAGCATCGCCGGAGAACCTGACTGACGG--TTTGGGGTT-CGGTGAT
** * * *
6386587 CGGGGGGGCCGGGGGGTGTGCGCACATAATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGG
573 CGGGGGGGAAGGAGTGT-TG-GCACATGATGTGCGAT-GGTGCTAGTAC-TGGCCCTTATATTGG
* * * * * *
6386652 CCCCCTATCCCTCACCAAACCTTGAGAACTCGCACCCCCGTGAAGAGCATTTGAGATTGTACAGG
634 ---CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGG
* * * * *
6386717 TTTCCTGCTAGTAGCCATTAAAGTATCTAAAATGGGGACAGTTTTTTCAAAAGGTCACAAAATCT
696 TTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCT
6386782 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCT
761 TGTACAC-T--AGTTTTTAGCTGAATTTTTTTGTGCATG-C--CAAAAATACAAGGATCA-GTCT
* * * *
6386847 AACAAGTTTGGGGCCAAAACTCCGTCCGAAGAAATTTTAAAAATTCTCAAACCGTAAAAAGTTTC
819 -ACCA----GGGGCCAAAACTCC-T------TAA-TTTAAAAAATC-CCAA-C-TAAAAAGTTTC
*
6386912 A
868 G
* *
6386913 AAAATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGG-CC
1 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* * * * *
6386977 ATTGTATG-ATTTAGAAGCCATAAAAATGGTATTGGCATGTAAAAATATGAAGATATGCCTAAAC
66 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
* *
6387041 CCACCTACCACCCTATCGATCCACGGCTCGCGCATCCCGTCTCTCTGG-CGGGTGTAGTGCCCGC
131 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTC-GGCGTAGTGCCCGC
* * * *
6387105 CTGCCCGCTCA-----T--TTT-GTCAATTGGCTTAGGCATACGGAGTTCATTCCCAATCTAAGA
195 CCGCCCGCACACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGA
* * * * * * * *
6387162 TCAGATCGGACCGAGGGTTACAGCAGTATGCAGGATCGACAGCATGCAAAGGGTGACCC-GACGA
260 TCAGACCGGACAGAGGGTT---GCA-CA-GCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGA
** * *
6387226 TCCTCGGCTTGCGTATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGA
320 TCCTCGGCTTAAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGA
* * * *
6387291 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAATCTAAGATCGGAC
385 CTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
* * * *
6387356 GGGACAGAGGGTTACGACAGCACATGCTAGGCTCGAGCATGTGCTAGTGCCGCATTTTTCTTTGT
450 CGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGT
* * * ** *
6387421 CGGGGCACCATCGCGGGAGCATCATCCGGAGAACCTGACCGACGACATTGAGGTTTCGGTGATCA
515 C-TGGCACCATCGC-GGAGCATC-GCCGGAGAACCTGACTGACG-GTTTG-GGGTTCGGTGATC-
* ** * *
6387486 GGGGGCCGG--GGGGTGTCCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTACATTGGC
574 GGGGG--GGAAGGAGTGTTGGCACATGATGTGCGAT-GGTGCTAGTAC-TGGCCCTTATATTGG-
*
6387549 CCCCTATCCCTCATCAAACCTCGAAAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
634 --CCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
* *
6387614 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
697 TTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCTT
**
6387679 GTACACTTCGAGTTTTTAAATGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCATGTCTA
762 GTACAC-T--AGTTTTTAGCTGAATTTTTTTGTGCATG-C--CAAAAATACAAGGATCA-GTCT-
*** * *
6387744 AGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATCCCTAACCACAAAAAGTTTTG
819 A-CCAGGGGCCAAAACTCCTT-------AA-TTTAAAAAATCCC-AA-C-TAAAAAGTTTCG
* *
6387806 AAAATCGTGAAAAATAGAAAGCGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCCTAAGGGACC
1 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
*
6387871 ATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
66 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
*
6387936 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGACGTAGTGCCCGCC
131 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCC
* * *
6388001 CGCCCG-ACCCCCCGCCCACTCATTTCGTCAATTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
196 CGCCCGCA-CACCCG----CTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * *** * * * * * *
6388065 AAGATCGGACCGGACCGAGGGTTGTGGTAGTAGGATCTACAGCACGCAGAGGGTGACCCGGTCAA
256 AAGATCAGACCGGACAGAGGGTTG-CACAGCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGA
* * ** * * ***
6388130 TCCCCGACTTGCGCATCTCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCCCATTTCGTCTATTGA
320 TCCTCGGCTTAAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGA
* * * * *
6388195 CTTAGGCACACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAATCTAAGATCGGAC
385 CTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGAC
* * * * *
6388260 CGGACAGAGGTTTACGATAGCACATGTTGGACTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
450 CGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTC
6388323 ATCGGGGCAG
Statistics
Matches: 3448, Mismatches: 437, Indels: 346
0.81 0.10 0.08
Matches are distributed among these distances:
840 10 0.00
841 6 0.00
842 8 0.00
843 7 0.00
845 1 0.00
846 6 0.00
847 10 0.00
848 452 0.13
849 28 0.01
850 3 0.00
851 4 0.00
852 13 0.00
853 10 0.00
854 1 0.00
857 1 0.00
858 7 0.00
859 4 0.00
860 2 0.00
861 35 0.01
862 58 0.02
863 18 0.01
864 1 0.00
866 1 0.00
867 5 0.00
869 38 0.01
871 2 0.00
872 41 0.01
874 6 0.00
875 2 0.00
877 1 0.00
878 16 0.00
879 58 0.02
880 36 0.01
881 2 0.00
882 4 0.00
883 7 0.00
884 1 0.00
887 1 0.00
888 10 0.00
889 14 0.00
890 2 0.00
891 3 0.00
892 16 0.00
893 343 0.10
894 18 0.01
895 134 0.04
896 430 0.12
897 302 0.09
898 20 0.01
899 7 0.00
900 12 0.00
901 10 0.00
902 16 0.00
903 41 0.01
904 309 0.09
905 401 0.12
906 45 0.01
907 372 0.11
908 34 0.01
909 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (868 bp):
AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCC
CGCCCGCACACCCGCTCGTTTCGTCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
CAGACCGGACAGAGGGTTGCACAGCAAGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCTCG
GCTTAAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGG
CATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACA
GAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCGTCTGGCA
CCATCGCGGAGCATCGCCGGAGAACCTGACTGACGGTTTGGGGTTCGGTGATCGGGGGGGAAGGA
GTGTTGGCACATGATGTGCGATGGTGCTAGTACTGGCCCTTATATTGGCCTATCCCTCATCAAAC
CTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTA
AAGTGTCTGAAATGGGGACAATTTTTTCAAATGGTCACAAAATCTTGTACACTAGTTTTTAGCTG
AATTTTTTTGTGCATGCCAAAAATACAAGGATCAGTCTACCAGGGGCCAAAACTCCTTAATTTAA
AAAATCCCAACTAAAAAGTTTCG
Found at i:6385541 original size:26 final size:26
Alignment explanation
Indices: 6385505--6385555 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
6385495 TGACTTAGGG
6385505 ATACAGAGTTCATTCCCAGTCTAAGC
1 ATACAGAGTTCATTCCCAGTCTAAGC
* **
6385531 ATACGGAGTTCATTCGTAGTCTAAG
1 ATACAGAGTTCATTCCCAGTCTAAG
6385556 ATCGAACCGG
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.29, C:0.22, G:0.20, T:0.29
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAGTCTAAGC
Found at i:6386437 original size:26 final size:26
Alignment explanation
Indices: 6386401--6386450 Score: 82
Period size: 26 Copynumber: 1.9 Consensus size: 26
6386391 TTGACTTAGA
6386401 CATACAGAGTTCATTCCCAATCTAAG
1 CATACAGAGTTCATTCCCAATCTAAG
* *
6386427 CATACGGAGTTCATTCCCAGTCTA
1 CATACAGAGTTCATTCCCAATCTA
6386451 GGATCCGACC
Statistics
Matches: 22, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.30, C:0.28, G:0.14, T:0.28
Consensus pattern (26 bp):
CATACAGAGTTCATTCCCAATCTAAG
Found at i:6387332 original size:26 final size:26
Alignment explanation
Indices: 6387296--6387348 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6387286 GTTGACTTAG
*
6387296 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
6387322 GCATATGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
6387348 G
1 G
6387349 ATCGGACGGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:6387586 original size:896 final size:892
Alignment explanation
Indices: 6383272--6388331 Score: 5666
Period size: 896 Copynumber: 5.7 Consensus size: 892
6383262 GCCCTAGCCG
* * *
6383272 ACAAAAATACAAGGATCACGTCTGCGAAGTTTGGGGCAAAAACTTCTTCCGAAAAAATTTTAAAA
1 ACAAAAATACAAGGATCACGTCTAC-AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * * * *
6383337 AATCTGGAACCGCAAGAAGTTTTAAAAATCGTGAAAAAAAGAAAACGAGTCGTCTTGCCATCAAA
65 AATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * *
6383402 CTTCACGTCAAGGCTTAAGGGACCATTGTATGATTTTACAAGCCATAAAAGTGGCATTGGCATGC
130 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * *
6383467 AGAAATATGATGATGTGCCT-AACCCACCTACCACACTATCGATCCACGGCTTGTGCATCCCGTC
195 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* ** * *
6383531 TCTCTGGTCGGCAAAGTGCCCACCCGCCCGCCTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATA
260 TCTCTGGTCGG----GTG--TA-GTGCCCGCCTGCCCGCTCATTTCGTCAGTTGGCTTAGGCATA
* * * * * ** *
6383596 CGGAGTTCATTCCTAGTCTAAGATCAGACCGGACCAAGGGGTGCGGCAGCAAGATCGGTAGCATG
318 CGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCAGTAGCAAGATCGACAGCACG
* ** *
6383661 CAGAGGAGGACCCGG-CTGATCCTCGGCTTACGCATCCTGCCCCTCTGGCCGGCTGAGCATCCGT
383 CAGAGG-GGACCCGGAC-GATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGC
* * *
6383725 ACGCTCGTTTCGTGGGTTGA-TGTAGGCATA-AGGAGTTCATT-CCAGTCCAGGCATACGGAGTT
446 ACGCTCATTTCGTGGGTTGACT-TAGGCATACA-GAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * *** * ** ** * *
6383787 CATTTCGAGAT-TAAAAAAAAGACCAGACTTAGGGTTGGGACAGCACATGTTGGGCTCAAGCATG
509 CATTCCCA-ATCT-AAGATCGGACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATG
* * *
6383851 TGCTGGTGCCGCATTTTTCGTCGTTGGGGCACCATCATCGGAGCATC-GCCGGAGAACCTGACCG
572 TGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATC-GCGGAGCATCAGCCGGAGAACCTGACCG
*
6383915 ACGGCATTGGGGTTCCGGCGATCGGGGGGGCCGAGGGAGGTGTGCGCACATGATGTGC-ATTGGG
636 ACGGCATT-GGGTTCCGGTGATC-GGGGGGCCG-GGG-GGTGTGCGCACATGATGTGCGA-TGGG
* *
6383979 TGCTAGTACTTGGCCCTTATATTGGTCCCCTATCCTTCATCAAACCTCGAGAACTCACACCCCCT
696 TGCTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* *
6384044 TAAAGAGCATTTGAGATTTTACAGGTTTTCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAAA
761 TAAAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * ** * * *
6384109 CTTTTTTCAAATGGTCACAAAATCTTATAGACTTAAAGTTTTTAGGTTAATTTTTTTGTGCATAC
826 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGC
6384174 CA
891 CA
* * *
6384176 ATAAAAATACAAGGATCACATCTACAAAGTTAGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
1 ACAAAAATACAAGGATCACGTCTAC-AAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * *
6384241 AATCTCGAACTGCAAAAAGTTTCGAAAATGGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
65 AATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
***
6384306 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAT
130 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * * *
6384371 AGAAATATGAAGATGTGCATAAACCAACCTACCACCCTATCGATCCATGGCTTGCGCATCCTG-C
195 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* * * *
6384435 ATCTCTGG-CTGGCGTAGTGCCCGCCCGCCCAGTTGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
260 -TCTCTGGTCGGGTGTAGT----GCCCG-CC---TGCCCGCTCATTTCGTCAGTTGGCTTAGGCA
* * * * ** * *
6384499 TACGGAGCTCATTCCCCGTCTAAGATCAGACTGGACTGAGGGTTGTGGTAGCAAGATCGGCAACA
316 TACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCAGTAGCAAGATCGACAGCA
* * * * * * * *
6384564 CACAGAGGGGGACCC-AATTGATCCTCAGCTTAAGCATCCCGCCCCTCTGGCTGGTTGAGCGCCT
381 CGCAGA-GGGGACCCGGA-CGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* *
6384628 GCACGCTCATTTCATGGGCTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTT
444 GCACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTT
* * * * * * * *
6384693 CGTTCCCAGTCGAAGATCAGACTGGACCGAGAGTTACGACAGCACATGCTGGGCTCGGGCATGTG
509 CATTCCCAATCTAAGATCGGACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTG
* * * * * * *
6384758 CTGGTGCCGTAATTTTC-TGGTC-TGGCACCATCGCGGA-CAT-GGCCTAGAGAACCTGACTG-C
574 CTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGCGGAGCATCAGCC-GGAGAACCTGACCGAC
* ** * ** * *
6384818 GG-TTTGGGGTT-CTTTGATCGTGGGGAAGGAGTGT-TG-GC-CATGACTGGTG-GAT--GTGCT
638 GGCATT-GGGTTCCGGTGATCGGGGGGCCGGGGGGTGTGCGCACATGA-T-GTGCGATGGGTGCT
* * * * *
6384875 -GTA--TGG-CTTTATATTGG----C-ATCCCTCA-CAAA-ATTG-GAACTCACTCGCCCTTAAA
700 AGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAA
* *
6384928 GAGCATTTGAGA-TTTACAGGTGTCCTGCCAGTAGCCATTTAAAG-GTCTG-AATGGGGACACAC
765 GAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCA-TTAAAGTGTCTGAAATGGGGACAC-T
* **
6384990 TTTTTCAAAT-CTCACAATGCTCTT-TA-A--T---GTTTTTAGCTGAATTTTTTTGTGCATG-C
828 TTTTTCAAATGGTCACAA-AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
6385046 -
892 A
*
6385046 -CAAAAATACAAGGATCA--TCTACCA----GGGGCCAAAACTCCTT--------A--TTAAAAA
1 ACAAAAATACAAGGATCACGTCTACAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * ** *
6385094 ATCCCG-ACTG--AAAAGTTT-GGAAATTGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
66 ATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
*
6385155 TTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
131 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
*
6385220 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTAT
196 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
* * *
6385285 CTCTGGTCGGCGTAGT-GCCCGCCCGCCCGCACACCCGCTCGTTTCGTCAGTTGGCTTAGGCATA
261 CTCTGGTCGG-GT-GTAG--TGCCCGCCTG----CCCGCTCATTTCGTCAGTTGGCTTAGGCATA
* ** * * ** * * * *
6385349 AGGAGTTCATTCCCAGTCTAAGATTGGATCGGACAGACGATTTGCA-CAACAGGATCCACAGCAC
318 CGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGA-GGGTTGCAGTAGCAAGATCGACAGCAC
* * * *
6385413 GCAGAGGGGGACCCGGCCGATCCTCGGCTTACACATCCTGCCCCTCTGGCTGGCTGAGCGCCCGC
382 GCAGA-GGGGACCCGGACGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGC
* ** *
6385478 ACGCTCGTTTTATGGGTTGACTTAGGGATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
446 ACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
** * * * * *
6385543 TTCGTAGTCTAAGATCGAACCGGACTA-AGGGTTACGGCAGCACATGCTGGGCTTGGGCATGTGC
511 TTCCCAATCTAAGATCGGACCGGAC-AGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGC
* * *
6385607 TGGTGCCGCATTTTTCTTCGTTGGGGCACCACCGCCGGAG-A--A-CC--A-AA-C--A--GGCG
575 TGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG-CGGAGCATCAGCCGGAGAACCTGACCGACG
* * * * * *
6385660 GCATTGGGGTTCCGGCGATCTGAGGGCCGGGAGAGGCGTGTGCACATGATGTGCGATGGGTGCTG
639 GCATT-GGGTTCCGGTGATCGGGGGGCCGGG-G-GGTGTGCGCACATGATGTGCGATGGGTGCTA
*
6385725 GTACTTGGCCCTTATATTGGCCCCCTGTCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
701 GTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAG
* * *
6385790 AGCATTTGAGATTTTACTGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAGTTTT
766 AGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTT
* * ***
6385855 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAATTTTTTTGTACATATAA
831 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * *
6385917 AAAAAAACACAAGGATCACGTCTACCAAGTTTGGGGTCAAAACTCCTTCCGAAAAAATTTTAAAA
1 ACAAAAATACAAGGATCACGTCTA-CAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * * * *
6385982 AATC-CTGAACCACTAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCATCTTGCCATGAA
65 AATCTC-GAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
*
6386046 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACG
129 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
* *
6386111 CAGAAATTTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCAT
194 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * * * * * *
6386176 CTTTCTGG-CCGATGTAGTGCCAGCCCGCCCGTCTGCTCGCTCGTTCGTTTTGTCTGTTGGCTTA
259 CTCTCTGGTCGGGTGTAGT----GCCCG--C--CTG--C-C-CGCTCATTTCGTCAGTTGGCTTA
* * * *** *
6386240 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGTATCGAGGGTTCCAACCGCAAGATCGAT
312 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCAGTAGCAAGATCGAC
* * * * * * * *
6386305 AGCATGCAGAGGGGGCCCTAGCCGATCCCCGTCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCG
377 AGCACGCAGAGGGGACCC-GGACGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCG
* * *
6386370 CCCGCACGCTCGTTTCGTGGGTTGACTTAGACATACAGAGTTCATTCCCAATCTAAGCATACGGA
441 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGA
* * * * * * * * *
6386435 GTTCATTCCCAGTCTAGGATCCGACCAGACCGAGGGTTGCGGCAGCACATGCTAGGCTCGAACAT
506 GTTCATTCCCAATCTAAGATCGGACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCAT
* ** * * *
6386500 ATGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGAAGCATC-GTCGGAGAACCTGACT
571 GTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCG-CGGAGCATCAGCCGGAGAACCTGACC
* *
6386564 GAGGGCATTTGGGTTCCGGTGATCGGGGGGGCCGGGGGGTGTGCGCACATAATGTGCGATGGGTG
635 GACGGCA-TTGGGTTCCGGTGATC-GGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * * * *
6386629 CTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCACCAAACCTTGAGAACTCGCACCCCCGTG
698 CTAGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* * * * *
6386694 AAGAGCATTTGAGATTGTACAGGTTTCCTGCTAGTAGCCATTAAAGTATCTAAAATGGGGACAGT
763 AAGAGCATTTGAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
*
6386759 TTTTTCAAAAGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
828 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* *
6386824 ACAAAAATACAAGGATCACGTCTAACAAGTTTGGGGCCAAAACTCCGTCCGAAGAAATTTTAAAA
1 ACAAAAATACAAGGATCACGTCT-ACAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAA
* * * * *
6386889 ATTCTCAAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAGAAAATGAGTCGTCTTGCCATGAAA
65 AATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAA
* * *
6386954 CTTCACGTGAAGGCTTAAGGG-CCATTGTATG-ATTTAGAAGCCATAAAAATGGTATTGGCATGT
130 CTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGC
* * *
6387017 AAAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATCCACGGCTCGCGCATCCCGTC
195 AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTC
* *
6387082 TCTCTGG-CGGGTGTAGTGCCCGCCTGCCCGCTCATTTTGTCAATTGGCTTAGGCATACGGAGTT
260 TCTCTGGTCGGGTGTAGTGCCCGCCTGCCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTT
* * * * *
6387146 CATTCCCAATCTAAGATCAGATCGGACCGAGGGTTACAGCAGTATGCAGGATCGACAGCATGCAA
325 CATTCCCAGTCTAAGATCAGACCGGACCGAGGGTT---GCAGTA-GCAAGATCGACAGCACGCAG
* *
6387211 AGGGTGACCC-GACGATCCTCGGCTTGCGTATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
386 AGGG-GACCCGGACGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
* * *
6387275 TCATTTCGTCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCC
450 TCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * *
6387340 CAATCTAAGATCGGACGGGACAGAGGGTTACGACAGCACATGCTAGGCTCGAGCATGTGCTAGTG
515 CAATCTAAGATCGGACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTG
* * *
6387405 CCGCATTTTTCTTTGTCGGGGCACCATCGCGGGAGCATCATCCGGAGAACCTGACCGACGACATT
580 CCGCATTTTTCTTCGTCGGGGCACCATCGC-GGAGCATCAGCCGGAGAACCTGACCGACGGCATT
* * * *
6387470 GAGGTTTCGGTGATCAGGGGGCCGGGGGGTGTCCGCACATGATGTGCGATGGGTGCTGGTACTTG
644 G-GGTTCCGGTGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTG
* *
6387535 GCCCTTACATTGGCCCCCTATCCCTCATCAAACCTCGAAAACTCACACCCCCTTAAAGAGCATTT
708 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTT
*
6387600 GAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
773 GAGATTTTACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAAT
**
6387665 GGTCACAAAATCTTGTACACTTCGAGTTTTTAAATGAATTTTTTTGTGCATGCCA
838 GGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* *
6387720 ACAAAAATACAAGGATCATGTCT--AAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAA
1 ACAAAAATACAAGGATCACGTCTACAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
* * * ** *
6387783 ATCCCTAACCACAAAAAGTTTTGAAAATCGTGAAAAATAGAAAGCGAGTCGTCTTGCCATGAAAC
66 ATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
6387848 TTCACGTGAAGGCCTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCA
131 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
6387913 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
196 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
* * * *
6387978 CTCTGGTCGACGTAGT-GCCCGCCCGCCCGACCCCCCGCCCACTCATTTCGTCAATTGGCTTAGG
261 CTCTGGTCG-GGT-GTAG--TGCCCGCCTG----CCCG----CTCATTTCGTCAGTTGGCTTAGG
* ** * * *
6388042 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTGTGGTAGTAGGATCTACAG
314 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCAGTAGCAAGATCGACAG
* * * * * *
6388107 CACGCAGAGGGTGACCCGGTCAATCCCCGACTTGCGCATCTCGCCCCTCTGGCCGGCTGAGCGCC
379 CACGCAGAGGG-GACCCGGACGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCC
* *** * * *
6388172 CGCACGCCCATTTCGTCTATTGACTTAGGCACACGGAGTTCATTCCCAGTCTAAGCATATGGAGT
443 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGT
* * * * *
6388237 TCATTCCCAATCTAAGATCGGACCGGACAGAGGTTTACGATAGCACATGTTGGACTCGGGCATGT
508 TCATTCCCAATCTAAGATCGGACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGT
*
6388302 GCTGGTGCCGCATTTTTCTTCATCGGGGCA
573 GCTGGTGCCGCATTTTTCTTCGTCGGGGCA
6388332 GGATCGGCAG
Statistics
Matches: 3541, Mismatches: 460, Indels: 310
0.82 0.11 0.07
Matches are distributed among these distances:
840 1 0.00
841 3 0.00
842 9 0.00
843 10 0.00
844 3 0.00
845 3 0.00
846 6 0.00
847 8 0.00
848 429 0.12
849 24 0.01
850 14 0.00
851 11 0.00
852 15 0.00
853 10 0.00
854 1 0.00
857 1 0.00
858 7 0.00
859 4 0.00
860 2 0.00
861 35 0.01
862 57 0.02
863 18 0.01
864 1 0.00
866 2 0.00
867 5 0.00
869 40 0.01
871 1 0.00
872 39 0.01
874 4 0.00
875 3 0.00
877 1 0.00
878 18 0.01
879 57 0.02
880 35 0.01
881 2 0.00
882 4 0.00
883 7 0.00
884 1 0.00
887 1 0.00
888 11 0.00
889 14 0.00
890 4 0.00
891 5 0.00
892 15 0.00
893 351 0.10
894 15 0.00
895 110 0.03
896 454 0.13
897 324 0.09
898 14 0.00
899 14 0.00
900 11 0.00
901 19 0.01
902 19 0.01
903 41 0.01
904 390 0.11
905 369 0.10
906 39 0.01
907 398 0.11
908 21 0.01
909 11 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (892 bp):
ACAAAAATACAAGGATCACGTCTACAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
ATCTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
CTCTGGTCGGGTGTAGTGCCCGCCTGCCCGCTCATTTCGTCAGTTGGCTTAGGCATACGGAGTTC
ATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCAGTAGCAAGATCGACAGCACGCAGAGGGG
ACCCGGACGATCCTCGGCTTACGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTT
CGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAATCT
AAGATCGGACCGGACAGAGGGTTACGACAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCAT
TTTTCTTCGTCGGGGCACCATCGCGGAGCATCAGCCGGAGAACCTGACCGACGGCATTGGGTTCC
GGTGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTAT
ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTT
ACAGGTTTCCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAA
AATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
Found at i:6388471 original size:26 final size:26
Alignment explanation
Indices: 6388435--6388487 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6388425 GTTGACTTAG
6388435 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
* *
6388461 GCATATGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6388487 G
1 G
6388488 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6389373 original size:26 final size:26
Alignment explanation
Indices: 6389337--6389389 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6389327 GTTGACTTAG
* *
6389337 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCAAGTCTAA
*
6389363 GCATATGGAGTTCATTCCAAGTCTAA
1 GCATACGGAGTTCATTCCAAGTCTAA
6389389 G
1 G
6389390 ATCGGACCGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.28, C:0.21, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCAAGTCTAA
Found at i:6390077 original size:903 final size:899
Alignment explanation
Indices: 6388329--6391005 Score: 3936
Period size: 903 Copynumber: 3.0 Consensus size: 899
6388319 CTTCATCGGG
* * *** * * *
6388329 GCAGGATCGGCAGCACGCAGAG-GGTGACCCAACCGATCGTTGGCTTGCGCATCCTGCCCCTCTA
1 GCAGGATCGACAGCACGCAGAGAGG-GACCCGACCGATCCCCGACTTACGCATCCTGCCCCTCTG
*
6388393 GCCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
65 GCCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTTATTCCCAGTC
* *
6388458 TAAGCATATGGAGTTCATTCCTAGTCTAAGATCGGACCGGACA-AGGTTTACGGCAGCACATGCT
130 TAAGCATATGGAGTTCATTCCAAGTCTAAGATCGGACCGGACAGAGGTTTACGACAGCACATGCT
* * * * *
6388522 GGACTCGGGCATGTGCTGGTGCCACATTTTTCTTCGCCGTGGCACCATCACGAGAGCATCGTCGG
195 GGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGCC-AGGCACCATCA-GGGAGCATCGTCGG
* *
6388587 AGAACCTGATCGGCGGCATTGAGGTTTCGACGATCGGGGGGCTGGGGGGGTGTGCGCACATGATG
258 AGAACCTGATCGGCGGCATTGAGGTTTCGACGATAGGGGGGCCGGGGGGGTGTGCGCACATGATG
*
6388652 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
323 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTC
* *
6388717 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTATAGTGTCTGAA
388 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGAA
**
6388782 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAAATGAATTTTTT
453 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* *
6388847 TGTGCATGCCAACAAAAATACAAGGATCATGT-T--TAAGTTTGGGGCCAAAACTCCTT-TCGAA
518 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCT-GAA
6388908 AAAATTTTAAAAAACCTCGAACCAA-AAAAAGTTTCAAAATCGTGAAAAATAGAAAACGAGTCGT
582 AAAATTTTAAAAAA-CTCGAA-CAACAAAAAGTTTCAAAATCGTGAAAAATAGAAAACGAGTCGT
6388972 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATG
645 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATG
*
6389037 GCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
710 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
6389102 GCGCATCCCGTTTCTCTGGCCGGCGTAGTGCCCGCCCGCTTGCCCGCCCGCCCGCTCGTTTCGTC
775 ACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCG--T--CCGCCCGCCCGCTCGTTTCGTC
* * **
6389167 AGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGTGGCA
836 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCA
* * ** *
6389231 GCAGGATC-AGCAGCATGCAGAG-GGCGACCTGGTCGATCCCCGACTTACGCATCCCGCCCCTCT
1 GCAGGATCGA-CAGCACGCAGAGAGG-GACCCGACCGATCCCCGACTTACGCATCCTGCCCCTCT
*
6389294 GGCCGGCTGAGGGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTTATTCCCAGT
64 GGCCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTTATTCCCAGT
* * *
6389359 CTAAGCATATGGAGTTCATTCCAAGTCTAAGATCGGACCGGACAGAGGTTTTCAATAGCACATGC
129 CTAAGCATATGGAGTTCATTCCAAGTCTAAGATCGGACCGGACAGAGGTTTACGACAGCACATGC
* *
6389424 TGGGCTCAGGCCTGTGCTGGTGCTGCATTTTTCTTCGCCAAGGCACCATCGAGGGAGCATCGTCG
194 TGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGCC-AGGCACCATC-AGGGAGCATCGTCG
* * *
6389489 GAGAACCTGATCGACCGCATTGAGGTTTCGGCGATAGGGGGGCCGGGGGGGTGTGCGCACATGAT
257 GAGAACCTGATCGGCGGCATTGAGGTTTCGACGATAGGGGGGCCGGGGGGGTGTGCGCACATGAT
*
6389554 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCGCCCTATCCCTCATCAAACCTTGAGAACT
322 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
6389619 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGA
387 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGA
6389684 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
452 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* ** *
6389749 TTGTGCATGCCAAAAAAAATATGAGGATCACGTCTACCAAGTTTGGGGCCAAAATTCCTTCTGAA
517 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAA
* *
6389814 AAAATTTTAAAAAATCTCGAACAACAAAAAGTTTCAAAAATCGTCAAAAATAGAAAACGCGTCGT
582 AAAATTTTAAAAAA-CTCGAACAACAAAAAGTTTC-AAAATCGTGAAAAATAGAAAACGAGTCGT
* *
6389879 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTGTGAATTTACAAGCCATAAAAATG
645 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATG
*
6389944 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACAACCCTATCGATCCACGGCTT
710 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
*
6390009 ACGCATCCCGTCTCTCTGGCCGACGTAGTGCCTGCCCGTCCGCCCGCCCGCTCGTTTCGTCGGTT
775 ACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGTCCGCCCGCCCGCTCGTTTCGTCGGTT
* * * * *
6390074 GGCTTTGGCATATGGAGTTCATTCCCAGTCTAAGGTCAGACCGGACCGAGGGTTACGGTA
840 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCA
* * * * *
6390134 GCAGTATCGACAGCACGTAGAGAGGGACCCGACCGATCCTCGGCTTACGCATCCTGCCCCTTTGG
1 GCAGGATCGACAGCACGCAGAGAGGGACCCGACCGATCCCCGACTTACGCATCCTGCCCCTCTGG
* * * * * *
6390199 CCGGCTAAGCGCTCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTGT-TTCCCAGTG
66 CCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTT-TATTCCCAGTC
* * * *
6390263 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGATC-GAGGGTTACGACAGCACATGC
130 TAAGCATATGGAGTTCATTCCAAGTCTAAGATCGGACCGGA-CAGAGGTTTACGACAGCACATGC
* * * * **
6390327 TGGGCTCAAGCATGTGCTGCTACCGCATTTTTCTTCGTCCGGGCACCATCCCGGAGCATCGTCGG
194 TGGGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCG-CCAGGCACCATCAGGGAGCATCGTCGG
* * * *
6390392 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGAT
258 AGAACCTGATCGGCGGCATTGAGGTTTCGACGAT-AGGGGGGCCGGGGGGGTGTGCGCACATGAT
* * *
6390457 GTACGGTGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
322 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACT
* * *
6390522 CACACCCCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAATAGCCATT-AAA-GTAATG
387 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGT-CTG
* *
6390585 AAATGGGGACACTTTTTTCAAATGGACACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGT
451 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* ** *
6390650 TTTGTGCATGCCAACAAATATACAAGGATCACGTCTACCAAGTTTGGGGTGAAAACTCCTTC-CA
516 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGA
* ** * * **
6390714 AAAATATTTTTAAGAAAACCCGAACCGC-AAAAGTTTCGCAAATCATGAAAAATAGAAAATTAGT
581 AAAA-A-TTTTAA-AAAACTCGAACAACAAAAAGTTTC-AAAATCGTGAAAAATAGAAAACGAGT
**
6390778 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGTCACCATTGTATGAATTTAGAAGCCATAAAA
642 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAA
* *
6390843 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTACACCCACCTACCACCCTATCGATCCATGG
707 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGG
* * * * *
6390908 CTTGA-TCATCCCATCTCTCTGGCCGGCGTA--G--TGCCCGCCCGCCCGTCTGCTCGTTTCGTC
772 CTT-ACGCATCCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGTCCGCCCGCCCGCTCGTTTCGTC
6390968 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
836 GGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
6391006 CATATCGAGT
Statistics
Matches: 1608, Mismatches: 147, Indels: 44
0.89 0.08 0.02
Matches are distributed among these distances:
898 62 0.04
900 1 0.00
901 7 0.00
902 496 0.31
903 783 0.49
904 13 0.01
905 4 0.00
906 54 0.03
907 188 0.12
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
GCAGGATCGACAGCACGCAGAGAGGGACCCGACCGATCCCCGACTTACGCATCCTGCCCCTCTGG
CCGGCTGAGCGCCCGCACGCTCATTTCGTCGGTTGACTTAGGCATACGGAGTTTATTCCCAGTCT
AAGCATATGGAGTTCATTCCAAGTCTAAGATCGGACCGGACAGAGGTTTACGACAGCACATGCTG
GGCTCAGGCATGTGCTGGTGCCGCATTTTTCTTCGCCAGGCACCATCAGGGAGCATCGTCGGAGA
ACCTGATCGGCGGCATTGAGGTTTCGACGATAGGGGGGCCGGGGGGGTGTGCGCACATGATGTGC
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
TTTTAAAAAACTCGAACAACAAAAAGTTTCAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTG
GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTACGCAT
CCCGTCTCTCTGGCCGGCGTAGTGCCTGCCCGTCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTA
GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTACGGCA
Found at i:6390276 original size:26 final size:26
Alignment explanation
Indices: 6390240--6390292 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6390230 GTTGACTTAG
** *
6390240 GCATACGGAGTTGTTTCCCAGTGTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6390266 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6390292 G
1 G
6390293 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.25, C:0.23, G:0.25, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6392087 original size:729 final size:722
Alignment explanation
Indices: 6390217--6392128 Score: 2589
Period size: 739 Copynumber: 2.6 Consensus size: 722
6390207 GCGCTCGCAC
* * * ** * *
6390217 GCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTGTTTCCCAGTGTAAGCATACGGAGTTCATT
1 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATA-TGAGTTCATT
* * * * * *
6390282 CCCAGTCTAAGATCGGACTGGATCGAGGGTTACGACAGCACATGCTGGGCTCAAGCATGTGCTGC
65 CCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGTTGG
* * *
6390347 TACCGCATTTTTCTTCGTCCGGGCACCATCCCGGAGCATCGTCGGAGAACCTGACCGGCGGCATT
130 TGCCGCATTTTTCTTCGTGC-GG-------CC----CATCGTCGGAGAACCTGACCGGAGGCATT
* * * *
6390412 GGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTACGGTGGGTGCTGGCACT
183 GGGGTTTCGACGATC-GGGGGGCC--GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACT
*
6390477 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCAT
245 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCAT
* **
6390542 TTGAGATTTTACAAGTTTGCTGCCAATAGCCATTAAAGT-AATGAAATGGGGACACTTTTTTCAA
310 TTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAA
* * *
6390606 ATGGACACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAATAT
375 ATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAAT
* **
6390671 ACAAGGATCACGTCTACCAAGTTTGGGGTGAAAACTCCTTCCAAAAATATTTTTAAGAAAACCCG
440 ACAAGGATCACGTCT--CAAGTTGGGGGCCAAAACTCCTTCCAAAAATATTTTTAAGAAAACCCG
* * **
6390736 AACCGCAAAAGTTTCGCAAATCATGAAAAATAGAAAATTAGTCGTCTTGCCATGAAACTTCACGT
503 AACCGAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGT
* *
6390801 GAAGGCTTAAGTCACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAGAAATAT
568 GAAGGCTTAAGACACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAAAAATAT
* * * *
6390866 GAAGATGTGCCTACACCCACCTACCACCCTATCGATCCATGGCTTGATCATCCCATCTCTCTGGC
633 GAAGATGTGCCTAAACCCACCTACCACACTATCGATCCACGGCTTGAGCATCCCATCTCTCTGGC
* ** * *
6390931 CGGCGTAGTGCCCGCCCGCCCGTCT
698 CGGCGGACCGCCCGCCCACCCGCCT
6390956 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATCGAGTTCATT
1 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATAT-GAGTTCATT
* * * * *
6391021 CCCAGTCTAAGATCGGACCGGACAGAGGTTTATGGCAGCACATGCTAGACTCAGGCATGT-TCTG
65 CCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGT-TG
* *
6391085 GTGCCGCATTTTTCTTCGTCGAGGCACCATCGCAGGAGCATCGCCAGAGAACCTGACCGGAGGTA
129 GTGCCGCATTTTTCTTCGT-GCGGC-CCAT--C----G--TCG---GAGAACCTGACCGGAGGCA
*
6391150 TTGAGGTTTCGACGATCGGAGGGGCCGAGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
181 TTGGGGTTTCGACGATCGG-GGGGCCG-GGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC
* *
6391215 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCTTTAAAGAGCA
244 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCA
* *
6391280 TTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATAAAAGTGTCTGAAATGGGGACACTTTTTTCA
309 TTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCA
* * **
6391345 AATGGTTACAAAATCTTGTACACTTCAAGTTTTTAAATGAATTTTTTTGTGCATGCCAACAAAAA
374 AATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAA
6391410 TACAAGGATCACGTCT-AAGTTGGGGGCCAAAACTCCTTCCGAAAAA-A-TTTTAA-AAAACCCC
439 TACAAGGATCACGTCTCAAGTTGGGGGCCAAAACTCCTTCC-AAAAATATTTTTAAGAAAA-CCC
*
6391471 GAACTGTAAAAAGTTT-GAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
502 GAACCG-AAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
*
6391535 GTGAAGGCTTAAGAGACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAAAAAT
566 GTGAAGGCTTAAGACACCATTGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAAAAAT
* **
6391600 ATGAAGATGTGCCTAAACCCACCTACCACACTATCGATCCACGGCTTGCGCATCCTGTCTCTCTG
631 ATGAAGATGTGCCTAAACCCACCTACCACACTATCGATCCACGGCTTGAGCATCCCATCTCTCTG
*
6391665 GCTGACGTTGCGCCGACCGTCCGCCCACCCGCCT
696 GC---CG--GCG--GACCGCCCGCCCACCCGCCT
*
6391699 GCTCGTTTCGTCGGTTGGCTTAGGTATACGGAGTTCATTCCCAGTCTAAGCATATGAAGTTCATT
1 GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATG-AGTTCATT
* * *
6391764 CCCAATCTAAGATCAGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGCATGTGTTGG
65 CCCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGTTGG
* * * * *
6391829 TGTCACATTTTTCTTCGCTGCGGCCCATCGTCGGAGAACCTGACTGGTGGCATTGGGGTTTCGAA
130 TGCCGCATTTTTCTTCG-TGCGGCCCATCGTCGGAGAACCTGACCGGAGGCATTGGGGTTTCGAC
* * *
6391894 TATCGAGGGGGCCGGGGG-GTGCACACATGATGTGCGATGGGTGGTGGTACTTGGCCCTTATATT
194 GATCG-GGGGGCCGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
*
6391958 GGCCCCCTATCCCTTATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
258 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
* *
6392023 ACTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGATACTTTTTTCAAATGGTCACAAAAT
323 AGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
*
6392088 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGAGCATG
388 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
6392129 TGAAAAATCC
Statistics
Matches: 1042, Mismatches: 99, Indels: 74
0.86 0.08 0.06
Matches are distributed among these distances:
729 206 0.20
730 4 0.00
731 39 0.04
732 2 0.00
733 1 0.00
734 3 0.00
735 5 0.00
736 182 0.17
737 33 0.03
738 6 0.01
739 266 0.26
740 135 0.13
741 3 0.00
742 5 0.00
743 150 0.14
744 2 0.00
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.27
Consensus pattern (722 bp):
GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATATGAGTTCATTC
CCAGTCTAAGATCGGACCGGACCGAGGGTTACGGCAGCACATGCTGGGCTCAGGCATGTGTTGGT
GCCGCATTTTTCTTCGTGCGGCCCATCGTCGGAGAACCTGACCGGAGGCATTGGGGTTTCGACGA
TCGGGGGGCCGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGC
CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAAGT
TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
GTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTC
AAGTTGGGGGCCAAAACTCCTTCCAAAAATATTTTTAAGAAAACCCGAACCGAAAAAGTTTCGAA
AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGACACCAT
TGTATGAATTTAGAAGCCATAAAAATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCC
ACCTACCACACTATCGATCCACGGCTTGAGCATCCCATCTCTCTGGCCGGCGGACCGCCCGCCCA
CCCGCCT
Found at i:6394369 original size:26 final size:26
Alignment explanation
Indices: 6394340--6394392 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6394330 GTTGACTTAG
*
6394340 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6394366 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6394392 G
1 G
6394393 ATCAGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6394730 original size:882 final size:886
Alignment explanation
Indices: 6392131--6395429 Score: 4247
Period size: 882 Copynumber: 3.7 Consensus size: 886
6392121 TGAGCATGTG
* * * *
6392131 AAAAATCCTTTCGAAAAAATTTTAAAAAATCCCGAACTGCAAAAAGTTTCAAAAATCATGAAAAA
1 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAA
* *
6392196 TAGAAAACGAGTCGTCTTGCCATGAAACTCCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
66 TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* ** *
6392261 CAAGCCATAAAAATGGCAATGGCATGCAGAAATATGAAGATGTACCTAAACCCACCTACCACCCT
131 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * *
6392326 ATCGATCCACGGCTTGTACATCCCGTCTCTCTGGCAGGCGTAGTGCCCGCCCGCCCGTCCGCTCG
196 ATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCA
* ***
6392391 TTTTGTC-GTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATC-AGATCGGATTGAGGGT
261 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGA-ATCGGACCAAGGGT
* * * * * * *
6392454 TGCGGTAGCAAGATCGCTAGCACATAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCCACC
325 TACGGCAGCAGGATTGCCAGCACACAGA-GGGGA---G--CGA----C--CTTGCGCATCCCGCC
*
6392519 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGAAGTTCATTC
378 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
* * * * * *
6392584 CCAGTCTAAGCATATGGAGTTCATTCCCAGTCCAACATCGGACTAGACCGAGGGTTACGGTAGTA
443 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCA
* * * *
6392649 CATGCTGGGCTCTGGCATGTGCTAGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCAT
508 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCAT
* * *
6392714 CGCCGGAGAACCTGACCTGCGACATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCACA
573 CGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGGTGTGCGCA
*
6392779 CATGATATGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCA
636 CATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCA
* * *
6392844 AGAACTCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAATT
701 AGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT
* * * * *
6392909 GTCAAAAATGGGTACATTTTTTTCGAATGGTCACAAAAT-GTGTACACTTCGAGTTTTTAGCTGA
766 GTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGA
*
6392973 ATTTTTTTGTGCATGCCAACAAAAATAC-AGGTATCACGTCTACCAAGCTTGGGGCC
831 ATTTTTTTGTGCATGCCAACAAAAATACAAGG-ATCACGTCTACCAAGTTTGGGGCC
** * *
6393029 AAAACTCCTTCCGAAAAAATTTTAAAAAATCTAAAACTGCAAAAAGTTTCCAAAATCATGAAAAA
1 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAA
* * **
6393094 TAGAAAACGAGTTGTCTTGCCATGAAACTTCACGTGAATTCTTAAGGGACCA-TGTATGAATTTA
66 TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
6393158 CAAGCCATAAAAATGGCATTGGCACACAAAAATAAGAAGATGTGCCTAAACCCACCTACCACCCT
131 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
** * **
6393223 ATCGATCCACGGCTTGCGTATCCCATCTCTCTGGCCGGCGTAGTGCTCGCCTGCCCGCTAGCCCG
196 ATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-GCCCGCCCGCCCG
* * * *
6393288 CT-AGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATGCCTAGTCTAAGATTGGAT-GGACCGA
257 CTCA-TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGAATCGGACCAA
* * *
6393351 GGG-TAGCAGGCAGCAGGATTGGCAGCACACAGAGGGGACATGGCCAATCCCTGGCTTGCACATC
321 GGGTTA-C-GGCAGCAGGATTGCCAGCACACAGAGGGG--A--G-CGA---C---CTTGCGCATC
* * * * * *
6393415 CTGCCCCTCTAGCTGGCTGAGCGCCCGCAAGCCCGTTTCATGGGTTGACTTAGGCATAAGGAGTT
373 CCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTT
* * * *
6393480 CATTCCTAGTCTAAGCATACGGAGTTTTATTCCCAGTCTGAGATCGGACCAGACTGAGGGTTACG
438 CATTCCCAGTCTAAGCATACGGAG-TTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACG
* * *
6393545 GCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCACATTTTTCTTTGCCAGGGGCACCATCGCC
502 GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCC-GGGGCACCATCGCC
* ** *
6393610 ---G-A-------AGAACCTGACCGGCGGCATTGAGGTTCCGGTGATCAGGGGGCCGGGAGGGTG
566 GGAGCATCGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGG-GGGTG
* * *
6393664 TGCGCCCATGATGTGTGATGGGTGCTGGTTCTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
630 TGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
* *
6393729 ACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGCTTTGCTGCCAGTAGCCAT
695 ACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCAT
* *
6393794 TAAAGTGTCTAAAATGGGGACACGTTTTTCAAATGATCACAAAATCTTGTACACTTCGAGTTTTT
760 TAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTT
* * * *
6393859 AGCTGAATTTTTTTATGAATGCCAAAAAAAATACAAGGATCACGTTTACCAAGTTTGGGGCC
825 AGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
*
6393921 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAA
1 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAA
* *
6393986 TAAAAAATGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTACGAATTTA
66 TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
**
6394051 CAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
131 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * *
6394116 ATCGATCCAC-GCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCTGCACGCTCGCCCGCTCA
196 ATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCA
* * * * * *
6394180 TTTCGTCGGTTGGCTTGGGCATGCAGAGCTCATTCC-AGTCTAAGATCGAACCAGACCAAGGGTT
261 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGAATCGGACCAAGGGTT
** * *
6394244 ACGGTTGTAGGATTGCCAGCACGCAGA-GGG-G-GA-CTTGCGCATCCCGCCCCTCTGGCCGGCT
326 ACGGCAGCAGGATTGCCAGCACACAGAGGGGAGCGACCTTGCGCATCCCGCCCCTCTGGCCGGCT
* * * *
6394305 GAGCGCCCGCACGCTCGTTCCGTAGGTTGACTTAGGCATACGGAGTTCATTCCCATTCTAAGCAT
391 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
* * * * *
6394370 ACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCTGTAGCACATGCTGGGCTTG
456 ACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCG
* * * *
6394435 GGAATGTGCTGGTGCCGTATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCGTCGGAGAACCT
521 GGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCT
* * *
6394500 GATCGGTGGCATTGGGGTTCCGAGGATCGGGGGGCCCGAGGGGGTGTGCGCACATGATGTGCGAT
586 GACCGGCGGCATTGGGGTTCCGACGATCGGGGGG-CCG-GGGGGTGTGCGCACATGATGTGCGAT
*
6394565 GGGTGCTGGGACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCC
649 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCC
* * *
6394630 CCTTAAAGAGCATTTGAGATCTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
714 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGG
* *
6394695 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATGTTTTTGTGCA
779 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
* *
6394760 TGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTAGGGCC
844 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
** * * * *
6394803 AAAACTCCACCCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAA
1 AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAA
* * * *
6394868 TAAAAAATGAGTTGTCTTGTCATGAAACTTCACGTGAAGGATTAAGGGACCATTGTATGAATTTA
66 TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
* *
6394933 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGTCTAAACCTACCTACCACCCT
131 CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
* * * * * * *
6394998 ATCAATGCATGGCTTGCACATCCCGTCTCCCTGGCCGACGTAGTGCCCGCCCACCCGCCCGCTCG
196 ATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCA
* * *
6395063 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGATCGAACCATGGGTT
261 TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGAATCGGACCAAGGGTT
* * * *
6395128 GCGGCAGCAGGATCAG-CAGCACGCAGACGGGGACCCGATCGATCGTCGGCTTGTGCATCCCGCC
326 ACGGCAGCAGGAT-TGCCAGCACACAGA-GGGGA---G--CGA----C--CTTGCGCATCCCGCC
* * * * * *
6395192 CTTCTGCCCTGCTGAGCACCCGCACGCTCGCTTCGTGGGTTGACTTAGGCATACGGAGTTCATTC
378 CCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTC
* * * * * *
6395257 CCAGTCTAAGCCTACGAAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGATGCGACAGCT
443 CCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCA
* * * * *
6395322 CATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTTTTTGTCGGGGCACCATCGCCAGAGCAT
508 CATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCAT
* * *
6395387 CGCCGGAGAACCTGACTGGCGGTATTGGGGTTCTGACGATCGG
573 CGCCGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGG
6395430 TGCTGGTACT
Statistics
Matches: 2093, Mismatches: 255, Indels: 104
0.85 0.10 0.04
Matches are distributed among these distances:
870 14 0.01
871 76 0.04
872 87 0.04
873 1 0.00
874 1 0.00
879 1 0.00
881 36 0.02
882 435 0.21
883 79 0.04
884 43 0.02
885 1 0.00
886 6 0.00
887 32 0.02
888 53 0.03
889 4 0.00
890 5 0.00
891 171 0.08
892 239 0.11
893 87 0.04
897 111 0.05
898 107 0.05
899 2 0.00
900 229 0.11
901 123 0.06
902 136 0.06
903 14 0.01
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (886 bp):
AAAACTCCTTCCGAAAAAATTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAA
TAAAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTA
CAAGCCATAAAAATGGCATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCT
ATCGATCCACGGCTTGCACATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCA
TTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGAATCGGACCAAGGGTT
ACGGCAGCAGGATTGCCAGCACACAGAGGGGAGCGACCTTGCGCATCCCGCCCCTCTGGCCGGCT
GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCAT
ACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCTGGGCTCG
GGCATGTGCTGGTGCCGCATTTTTCTTCGCCGGGGCACCATCGCCGGAGCATCGCCGGAGAACCT
GACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGATGG
GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCC
TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGAC
ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC
Found at i:6395279 original size:26 final size:26
Alignment explanation
Indices: 6395243--6395292 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
6395233 GACTTAGGCA
*
6395243 TACGGAGTTCATTCCCAGTCTAAGCC
1 TACGAAGTTCATTCCCAGTCTAAGCC
6395269 TACGAAGTTCATTCCCAGTCTAAG
1 TACGAAGTTCATTCCCAGTCTAAG
6395293 ATCGGACCAG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.28, G:0.18, T:0.28
Consensus pattern (26 bp):
TACGAAGTTCATTCCCAGTCTAAGCC
Found at i:6397327 original size:880 final size:859
Alignment explanation
Indices: 6395455--6397706 Score: 3068
Period size: 880 Copynumber: 2.6 Consensus size: 859
6395445 CTTAAATTGG
* *
6395455 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAATGTCTGAAATGG
1 CCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * * *
6395520 GGACACTTTTTTGAAATGGTCACAAAATCTTGTATACTTCGAGTTTTCACCTGAATTTTTTTGTG
66 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * *
6395585 CATGCCAACAAAAGTACAAGGATCACTTCTACCAAGTTTGGGGCCAAAATGTCTTCCGAAAAAAG
131 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAA-CTCTTTCGAAAAAAG
* * * * *
6395650 TTTAAAAAATCCCGAACCACAAAAAGTATCAAAAATCATGAAAAATAGAAAACGAGTGATCTTGC
195 TTTTAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGC
6395715 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTGAATTTACAAGCCATAAAAATGGCATT
260 CATGAAACTTCACGTGAAGGCTTAAGGGACCATT-TTTGAATTTACAAGCCATAAAAATGGCATT
* * *
6395780 GGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACCGCTTGTGCA
324 GGCAC--AAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCA
* * * ** * *
6395845 TCCCGTCTCTCTGGTCGACGTAGTGCCTGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGC
387 TCCCGTCTCTCTCGCCGACGTAGTCCCCACCCGCCCGCCCCCTCGTTTCATCGGTTAGCTTAGGC
* *
6395910 ATACGAAGTTCACTCCCAGTCAAAAATTAGACCGGACCGAGGGTTGCGGCAGCAAGATTGGCAGC
452 ATACGAAGTTCACTCCCAGTCAAAAATTAGACCGGACCGAGGGTTGCGGCAGCAAGATCGACAGC
* **
6395975 ACATAGAGGGGCACCCGATCGATCCTCGGCTTGTGCATCCCGCCCCTCTGGCCGGCTGAGCGCCC
517 ACATAGAGGGGCACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCCC
* ** *
6396040 GCACACTCATTTCGTGGGTTAACTTAGGCATACAGAGTTCATTCCCAGTGTAAGATCGGACCGGA
582 GCACACTCATTTCCTGGGTTAACCCAGGCATACAGAGTTCATTCCCAGTGTAAGATCGGAACGGA
6396105 CCGAGGGTTACCGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGG
647 CCGAGGGTTACCGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGG
* *
6396170 GCACCATCGGCGGAAAACTTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGTCGGGGAGGC
712 GCACCATCGGCGGAAAACTTGACCGACGGCATTAGGGTTCCGACGATCGGGGGGGTCCGGGAGGC
* *
6396235 TGTGCGCACATAATGTGTGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCTATCTCTCATCA
777 TGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCTATCCCTCATCA
*
6396300 AACCTCGAGAACTCACAC
842 AACCTCAAGAACTCACAC
* * *
6396318 CCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCTATTAAAGTGTCTGAAATAG
1 CCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * *
6396383 GGACACATTTTTCAATTGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTG
66 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* *
6396448 CATGCCAACAAAACTACAAGGATCACGTCTACCAAGTTTGGCGCCAAAACATCTTTCGAAAAAAG
131 CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-TCTTTCGAAAAAAG
*
6396513 TTTTAAAAATCCTGAACGGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGC
195 TTTTAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGC
*
6396578 CATGAAACTTCACGTGAAGGCTTAAGGGACCATTCTTCGAATTTACAAAGCCGATAAAAAATGGC
260 CATGAAACTTCACGTGAAGGCTTAAGGGACCATT-TTTGAATTTAC-AAGCC-AT-AAAAATGGC
* *
6396643 ATTGGCACAAAAAGATATGAAGATGTGCCTCAAACCCACCTA-CACCCTATCAATCCATGGCTTG
321 ATTGGCAC-AAAA-ATATGAAGATGTGCCT-AAACCCACCTACCACCCTATCGATCCACGGCTTG
** * *
6396707 CGCATACCCGTCTCTCTACGCCGGTGTAGTACCCCACCCGTCGCC-CACCAACCTTGTTTCGTCG
383 CGCAT-CCCGTCTCTCT-CGCCGACGTAGT-CCCCACCCG-C-CCGC-CC--CCTCGTTTCATCG
* * * * * * * *
6396771 GTTAGCTTAGGCAATACGGAGTTACATTCCCTGTCTAAGATTGGA-CTGAGCGAGGGTTGCGGCA
440 GTTAGCTTAGGC-ATACGAAGTT-CACTCCCAGTCAAAAATTAGACCGGACCGAGGGTTGCGGC-
* * * * *
6396835 AGCAGGATCGACAAGCACGTAGAGGGGGACCCGGTCGCTCCCCGGCTTGCACATCCCG-CCCTCT
502 AGCAAGATCGAC-AGCACATAGAGGGGCACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCT
* ** ** * *
6396899 GGCCGGTTGA-CGCGCCGCATTGCTTGTTTCCTGGGTTGACCCAGGCATGACGGAGTTCATTCCC
566 GGCCGGCTGAGCGC-CCGCA-CACTCATTTCCTGGGTTAACCCAGGCAT-ACAGAGTTCATTCCC
* * *
6396963 AGTGTAAGCTCGGAATGGACGCGAGGGTTACGGCAAGCACCATGCTGGGCTTCGGGCCATGTGCT
628 AGTGTAAGATCGGAACGGAC-CGAGGGTTACCGC-AGCA-CATGCTGGGC-TCGGG-CATGTGCT
* * * * *
6397028 GGT-CCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGAACTTGGCCGGCGGCATTAGGGTTCC
688 GGTGCCGCATTTTTCTTCGTCGGGGCACCATCGGCGGAAAACTTGACCGACGGCATTAGGGTTCC
6397092 GACGATCGGGGGGG-CCGGG-GGCTGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCT
753 GACGATCGGGGGGGTCCGGGAGGCTGTGCGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCT
6397155 CATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACAC
818 CATATTGG-CCCCTATCCCTCATCAAACCTCAAGAACTCACAC
*
6397198 CCCCTTAAAGTGCTTTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCT-AGAATG
1 CCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGA-AATG
6397262 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
65 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * ** *
6397327 GCACGCCAAAAAAAATACAAGGATCACGTCTACCAAGCATGGGGCCAGAACTCGTTT-GAAAAAA
130 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTC-TTTCGAAAAAA
* * * *
6397391 ATTTTAAAAAAT-CTCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATTGAAAACGAGTCGTCT
194 GTTTT-AAAAATCCT-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCT
*
6397455 TGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTTTATGAATTTACAAGCCATAAAAATGGC
257 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTTT-TGAATTTACAAGCCATAAAAATGGC
* *
6397520 ATTGGCATGCAAAAATACGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCACGGCTTGC
321 ATTGGCA--CAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * * * * * *
6397585 GCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCTCGTCCGCCCGCTCATTTCGTCGGTTGGCTTA
384 GCATCCCGTCTCTCTCGCCGACGTAGTCCCCACCCGCCCGCCCCCTCGTTTCATCGGTTAGCTTA
* * * * * *
6397650 GGCATACAAAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGCAGCA
449 GGCATACGAAGTTCACTCCCAGTCAAAAATTAGACCGGACCGAGGGTTGCGGCAGCA
6397707 CATGCTGGGC
Statistics
Matches: 1225, Mismatches: 127, Indels: 69
0.86 0.09 0.05
Matches are distributed among these distances:
863 280 0.23
864 5 0.00
865 5 0.00
866 56 0.05
867 22 0.02
868 30 0.02
869 29 0.02
870 23 0.02
871 4 0.00
872 4 0.00
873 22 0.02
874 34 0.03
875 54 0.04
876 80 0.07
877 87 0.07
878 18 0.01
879 79 0.06
880 308 0.25
881 74 0.06
882 11 0.01
ACGTcount: A:0.27, C:0.25, G:0.23, T:0.25
Consensus pattern (859 bp):
CCCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAATGG
GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
CATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCTTTCGAAAAAAGT
TTTAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTTTTGAATTTACAAGCCATAAAAATGGCATTGG
CACAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCC
GTCTCTCTCGCCGACGTAGTCCCCACCCGCCCGCCCCCTCGTTTCATCGGTTAGCTTAGGCATAC
GAAGTTCACTCCCAGTCAAAAATTAGACCGGACCGAGGGTTGCGGCAGCAAGATCGACAGCACAT
AGAGGGGCACCCGATCGATCCCCGGCTTGCACATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
ACTCATTTCCTGGGTTAACCCAGGCATACAGAGTTCATTCCCAGTGTAAGATCGGAACGGACCGA
GGGTTACCGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCAC
CATCGGCGGAAAACTTGACCGACGGCATTAGGGTTCCGACGATCGGGGGGGTCCGGGAGGCTGTG
CGCACATAATGTGCGATGGGTGCTGGTACTTGGCCCTCATATTGGCCCCTATCCCTCATCAAACC
TCAAGAACTCACAC
Found at i:6398557 original size:26 final size:26
Alignment explanation
Indices: 6398521--6398573 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6398511 GTTGACTTAG
6398521 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
6398547 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATATGGAGTTCATTCCCAGTCTAA
6398573 G
1 G
6398574 ATCAGACTAG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATATGGAGTTCATTCCCAGTCTAA
Found at i:6399256 original size:26 final size:26
Alignment explanation
Indices: 6399219--6399268 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
6399209 GACTTAGGCA
6399219 TACGGAGATCATTCCCAGTCTAAGCT
1 TACGGAGATCATTCCCAGTCTAAGCT
*
6399245 TACGGAGTTCATTCCCAGTCTAAG
1 TACGGAGATCATTCCCAGTCTAAG
6399269 ATTGAACCGG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.26, G:0.20, T:0.28
Consensus pattern (26 bp):
TACGGAGATCATTCCCAGTCTAAGCT
Found at i:6399656 original size:694 final size:695
Alignment explanation
Indices: 6398326--6399707 Score: 2002
Period size: 695 Copynumber: 2.0 Consensus size: 695
6398316 GCCGGCGTAG
* * * *
6398326 CGCCCGCCCGCCCGTTCGTTTCCTCGGTTGGTTTAGGGATACGGAGTTCATTCCCAGTCTAAGAT
1 CGCCCGCCCGCCCGTTCGTTTCCTCAGTTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* ** * *** * * *
6398391 CACACCAGACTGAGGGTTGTGGCAGTAGGATCGGCAGCATGTAGAGGAGGATCCGGTCGATCAAT
66 CACACCAGAATGAGGGTTACGGCAGCAGGATCGGCAGCACACAGAGGAGGACCCGGCCGATCAAC
*
6398456 GCCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCAGCACGCTCGTTTCGTGGGTTGACTTAG
131 GCCTTGCGCATCCCGCCCCTCTGGCCGACTGAACGCCAGCACGCTCGTTTCGTGGGTTGACTTAG
* * * *
6398521 GCATATGGAGTTCATTCCCAGTCTAAGCATATGGAGTTCATTCCCAGTCTAAGATCAGACTAGAC
196 GCATACGGAGATCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
** * * ** * * *
6398586 CTTGGGATGCGGTAGCACATTCTGGACTCAGGCATGTGCTGGTGCTGCATTTTTGTTCGTCGGGG
261 CGAGGGATGCGGCAGCACATGCTGGACTCAGGCATGTGCTGGTGCCACATTTTTCTTCGCCGAGG
* * *
6398651 CACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACCATCGGGGGGG
326 CACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACCATCGAGGGGC
* * *
6398716 CGGGGGTGTGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
391 CAGGGGTGTGTGTGCACACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* *
6398781 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT
456 ATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCT
* * *
6398846 GCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTTCA
521 ACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTACAAATGGTCACAAAATCTTGTACA
**
6398911 CTTCGAGTTACTAGCTGAATTTTTTTGTGCATTCCAACAAAAATACAAGGATCACGTCTACCAAG
586 CTTCGAGTTACTAGCTGAATTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCTACCAAG
*
6398976 TTTGGGGCCAAAACT-CTTTCCAAAAAAGTTTTAAAAAATCCCGCA
651 TTTAGGGCCAAAACTCCTTTCCAAAAAA-TTTTAAAAAATCCCGCA
* * *
6399021 CGCCCGCCTGCCCGTTTGTTTCGTCAGTTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
1 CGCCCGCCCGCCCGTTCGTTTCCTCAGTTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* * *
6399086 CAGACC-GAATCGAGGGTTACGGCAGCAGGATTGGCATCACACAGAGG-GGAACCCGGCCGATCA
66 CACACCAGAAT-GAGGGTTACGGCAGCAGGATCGGCAGCACACAGAGGAGG-ACCCGGCCGATCA
* * * * * *
6399149 CCGGCTTGCGCATCCCGCCCCTTTGGCCGGCTGAACGCCCGCATGCTCGTTTCGTGGGTTGACTT
129 ACGCCTTGCGCATCCCGCCCCTCTGGCCGACTGAACGCCAGCACGCTCGTTTCGTGGGTTGACTT
* * *
6399214 AGGCATACGGAGATCATTCCCAGTCTAAGCTTACGGAGTTCATTCCCAGTCTAAGAT-TGAACCG
194 AGGCATACGGAGATCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCA
* *
6399278 GACCGAGGGCTGCGGCAGCACATGCTGGGCTCAGGCATGTGCTGGTGCCACATTTTTCTTCGCCG
258 GACCGAGGGATGCGGCAGCACATGCTGGACTCAGGCATGTGCTGGTGCCACATTTTTCTTCGCCG
* * ** * *
6399343 AGGCACCATTGCCGGAGCATCGTCGGAGAACTTGACCGGTGGCATTGGGGTTCCGACGATTGAAG
323 AGGCACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACCATCG-AG
6399408 GGGCCAGGGG-G-GTGTGCACACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCC
387 GGGCCAGGGGTGTGTGTGCACACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* * *
6399471 CCCTATCGCTCATCAAACCTTAAGAACTCACACCCCTTTAAAGAGCATTTCAGATTTTACAGGTT
452 CCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTT
* * *
6399536 TGCTACCAGTAGCCCTTAAAGTGTTTGAAATGGGGACACTTTTTACAAATGGTCAGAAAATCTTG
517 TGCTACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTACAAATGGTCACAAAATCTTG
**
6399601 TACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCTAC
582 TACACTTCGAGTTACTAGCTGAATTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCTAC
* *
6399666 CAAGTTTAGGGCCAGAACTCCTTTCGAAAAAATTTTAAAAAA
647 CAAGTTTAGGGCCAAAACTCCTTTCCAAAAAATTTTAAAAAA
6399708 ATCCTGAACC
Statistics
Matches: 607, Mismatches: 75, Indels: 11
0.88 0.11 0.02
Matches are distributed among these distances:
694 263 0.43
695 335 0.55
696 9 0.01
ACGTcount: A:0.23, C:0.25, G:0.26, T:0.26
Consensus pattern (695 bp):
CGCCCGCCCGCCCGTTCGTTTCCTCAGTTGGCTTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
CACACCAGAATGAGGGTTACGGCAGCAGGATCGGCAGCACACAGAGGAGGACCCGGCCGATCAAC
GCCTTGCGCATCCCGCCCCTCTGGCCGACTGAACGCCAGCACGCTCGTTTCGTGGGTTGACTTAG
GCATACGGAGATCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAC
CGAGGGATGCGGCAGCACATGCTGGACTCAGGCATGTGCTGGTGCCACATTTTTCTTCGCCGAGG
CACCATCGCCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACCATCGAGGGGC
CAGGGGTGTGTGTGCACACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
ATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTCAGATTTTACAGGTTTGCT
ACCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTACAAATGGTCACAAAATCTTGTACA
CTTCGAGTTACTAGCTGAATTTTTTTGTGCACACCAACAAAAATACAAGGATCACGTCTACCAAG
TTTAGGGCCAAAACTCCTTTCCAAAAAATTTTAAAAAATCCCGCA
Found at i:6401633 original size:26 final size:26
Alignment explanation
Indices: 6401603--6401653 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
6401593 GTTGACTTAG
6401603 GCATACGGAGTTCATTCCAAGTCTAA
1 GCATACGGAGTTCATTCCAAGTCTAA
* *
6401629 GCATACGGAGTTCCTTCCCAGTCTA
1 GCATACGGAGTTCATTCCAAGTCTA
6401654 GGATCGGATC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.25, C:0.27, G:0.20, T:0.27
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCAAGTCTAA
Found at i:6405138 original size:26 final size:26
Alignment explanation
Indices: 6405102--6405154 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6405092 GTTGACTTAG
*
6405102 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
*
6405128 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACAGAGTTCATTCCCAATCTAA
6405154 G
1 G
6405155 ATCGGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAATCTAA
Found at i:6405611 original size:894 final size:885
Alignment explanation
Indices: 6401334--6406121 Score: 5295
Period size: 887 Copynumber: 5.4 Consensus size: 885
6401324 GAAAAAATTT
* * * * *
6401334 TAAACCTACCTACCACCCTATCGATCCACCGCTTGCGCATCCCGTCTCTCTGGCTGACTTAGTGC
1 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
** * *
6401399 CCGCCCGCCCGCCCGCCCATTTGCTCGCTTCGTCGGTTGGCTTAGGCATACGAAGTTCATTCCCA
66 CCGCCTACCCGCCCGCCC----GCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCA
* *** * * *
6401464 GTCTAAGATCAGACC-GAACTGAAGGTTGTGGTAGCAGGATCGGTAGCATGCATAGGGGGACCCA
127 GTCTAAGATCAGACCAG-ACTGAGGGTTACAGCAGCAGGATCGGCAGCATGCAGAGGGGGACCC-
* ** * * * * * *
6401528 GTCGATCCCCCGCTTGCGCATCGCGCCCCTCTGGCCGGCTGAGCTCCCGTACGCCCATTTCATGG
190 GACGATCCCTGGCTTGAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGG
* * *
6401593 GTTGACTTAGGCATACGGAGTTCATTCCAAGTCTAAGCATACGGAGTTCCTTCCCAGTCTAGGAT
255 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGAT
* * * * *
6401658 CGGATCGAACCGAGGGTTGCGGCAGTACATGCTGGGCTCGAGCATGTGCTGGTGCCGTATTTTTC
320 C-GACCGGACCGAGGGTTGC-GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTC
* * *** * ** *
6401723 TTCGTCGGGGCACCATCGTCGGAGCATCGCGCGG-GAACCTGACCGATGGAATTACGATTCCGAC
383 TTCGTCGAGGCACCATCGTCGGAGCATCAC-CGGAGAACCTGACCGGCCGCATTGGGGTTCCGAC
* *
6401787 AATCGGGGGGGTCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATA-
447 GATC------G-CGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATAT
* * *
6401851 TTGGCGCCCTATCCTTCATCAAACCTCGAGAACTCACACACCCTTAAAGAGCATTTGAGATTTTA
505 TTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTA
* * * **
6401916 CAGGTTGGCTGCCAGTGGCCATTAAAGTGTCTGAAATGGGGACACATTTTTCAAATCATCACAAA
570 CAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAA
* * * *
6401981 ATCTTGTACACTTAGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAACAAAAATACAAGGATCAT
635 ATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCAC
* * ** * *
6402046 GTCTACCAACTTTGGGGCCAAAACTCCTTCCTAGGAAATTTT-AAAAATCTCGAACCGTGAAAAG
700 GTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAACCCGAACC----AAA-
* *
6402110 TTTTGAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGGTTAAG
760 ---T-AAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAG
* ** *
6402175 GGACCATTGTATGAATTCACAAGATATAAAAATGGCATTGGCAGGCAGAAATATGAAGATGTGCC
821 GGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * * * *
6402240 TAAACTCACCTACCACCCTATCGATCCATGGCTTGTGCATTCCGTCTCTCTGGCCGGCGTGGTGC
1 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
*** * * *
6402305 CCGCCCGTCTGCCCGCCCGCTAGTTTCGTCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
66 CCGCCTACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * * * * * *
6402370 AAGATCAGACCGGACTGATGGTTGCAGTAGCAGGATTGGTAGCACGTAGAGGGGGACCTGGTCGA
131 AAGATCAGACCAGACTGAGGGTTACAGCAGCAGGATCGGCAGCATGCAGAGGGGGACC-CGACGA
* * *
6402435 TCCCCGACTT-ACGCATGCCGCCCCTCTGGCCGGCTGAGCGCCC-TCACGCTCGTTTCGTGGGTT
195 TCCCTGGCTTGA-GCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGT-ACGCTCGTTTCGTGGGTT
*
6402498 AACTTAGGCATACGGAGTTCATTCCCAG--T---C-TA---AG---------A-TC----A--GA
258 GACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGA
* * * *
6402538 CCGGACCGAGGGTTGCGACAGCACATGCTGGGTTCAGGCATGTGCTGATGCCGTATTTTTCTTCG
323 CCGGACCGAGGGTTGCG-CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCG
* * *
6402603 TC-AGGGCACCATCGTCGAAGCATCAACGGAGAACCTGACCGGCGGCATTGGGGTTCCGACGAT-
387 TCGA-GGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCCGCATTGGGGTTCCGACGATC
** * * * * * *
6402666 -C--GGCAT-TG-GCAGATGATGTGCGATGTGTGCTGGTAGTTGGCCCATATA-TTGGGCCCCTA
451 GCGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTTGGCCCCCTA
* * *
6402725 TCCCTCATCAAACCTCGGGAACTCACACCCCCTAAAAGAGCATTTGAGATTTTGCAGGTTTGCTG
516 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * * *
6402790 CCAGTAGCCATTAAAGTGTTTGAAATGGGGACACTCTTTTCAAATGGTCACAAAATCTTATATAC
581 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* * *
6402855 TTCGAGTTTTTAGCTGAATTTTTTTGTGCAAACCAACAAAAATACAAGGGTCACGTCTACCAAGT
646 TTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
*
6402920 TT-GGGCCAAAACTCCTTTCGAAAAAA-TTTAAAAAAATCCCGAACCGTAAAAAGTTTAAAAAAT
711 TTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAA-CCCGAACC----AAA---T--AAAAT
*
6402983 CATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC-----
766 CATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
**
6403043 ----A-TT-----CCATAAAAATGTTATTGGCATGCAGAAATATGAAGATGTGCC
831 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * *
6403088 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCTTCTCGTCTCTCTGGCCAGCGTAGT--
1 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * *
6403151 --GCCTACCGGCCCGCCCGCTCGTTTCGTCAGTTGGCTAAGGCATACGGAGTTCATTCCCAGTCT
66 CCGCCTACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * * * *
6403214 AAGATCAGACCGGACTGAGGGTTACGGCAGCGGGATCGGTAG-ATCACAGAGTGGGACCCGATCG
131 AAGATCAGACCAGACTGAGGGTTACAGCAGCAGGATCGGCAGCAT-GCAGAGGGGGACCCGA-CG
* * * * * * *
6403278 ATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGTGCCCGCAAGCTCTTTTCGTAGGTTG
194 ATCCCTGGCTTGAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTG
6403343 ACTTAGGCATACGGAGTTCATTCCCAG----A-C-TA---AG---------A-TC--AGAT----
259 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGAC
* * * * **
6403383 CGGACCGAGGGTTACAGCAGCACATGCTGGGCTCGCGCATGTACTGGTGCAGCATTTTTCTTCAC
324 CGGACCGAGGGTTGC-GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGT
* * * *
6403448 CG-GGCACCATCGTTGGAGCATCACCGGAGAACCTGATCGGCCACATTGGGGTTCCGACTAT--C
388 CGAGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCCGCATTGGGGTTCCGACGATCGC
* *
6403510 GGGGGGTGTGCGCACCTGATGTG-AGATGGGTGCTGGTTCTTGGCCCTTATA-TTGGCCCCCTAT
453 GGGGGGTGTGCGCACATGATGTGCA-ATGGGTGCTGGTACTTGGCCCTTATATTTGGCCCCCTAT
* *
6403573 CCCTCATCAAACCTCGAGAACTCACACCCCCTTCAAGAGCATTTGAGATTTTACAAGTTTGCTGC
517 CCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGC
* *
6403638 CAGTAGTCGTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
582 CAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACT
* *
6403703 TCGAGTTTTTAGCTGAATTTTTTTTTGCAAGCCAAAAAAAATACAAGGATCACGTCTTCCAAGTT
647 TCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCACGTCTACCAAGTT
* * * * *
6403768 TGGGGCGAAAAGC-CTTTCTGAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTTGAAAATC
712 TGGGGCCAAAA-CTCCTTCCGAAAAAATTTTAAAAAAACCCGAACC----AAA----T-AAAATC
*
6403832 ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACCTGAAGGCTTAAGGGACCATTGTA
767 ATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTA
* *
6403897 TGAATTTACAAGCCATAAAAATGGCATTGGTATGCAGAAAAATGAAGA--TG--
832 TGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* *
6403947 TAAACCCACCTACCACCCTATCGATCCACGGCTTGTGCATCCCGTCTCTCTGGCTGGCGTAGTGC
1 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * *
6404012 CCG-CT---CGCCCGCCCGCTCATTTTGTCGGTTGGCTTCGGCATACGGAGTTCATTCCCAGTCT
66 CCGCCTACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* ** * * * * * *
6404073 AAGATCAGACCGGACCAAGGGTTAAAGCAACAGGATTGGCAGCATGTAGAGTGGGACCCGGCTGA
131 AAGATCAGACCAGACTGAGGGTTACAGCAGCAGGATCGGCAGCATGCAGAGGGGGACCCGAC-GA
* * * * *
6404138 T-CCTCAGCTTAAGCATCCCCCCCCTCTTGCCGGCTGAGCGCTCGTACGCTCGTTTCGTGGGTTG
195 TCCCT-GGCTTGAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTG
* * * *
6404202 AC-TACCGCTTGCGGAGTTCATTCCCAGTCTAAGCATACAGAGTTCATTCCCAGTCTAAGATCAG
259 ACTTA-GGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC-G
* * * **
6404266 ACCGGACCGAGCGTTGCGACAGCACATGCTGGGCACGGGTATGTGCAAGTGCCGCATTTTTCTTC
322 ACCGGACCGAGGGTTGCG-CAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC
* * * * * *
6404331 CTCGGGGCACCATCGTCGGAGCATTACCGGAGAACCTGACCGACCGCATTGGTGTTTCGACGATC
386 GTCGAGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCCGCATTGGGGTTCCGACGATC
* * * *
6404396 G-GGGGGGTGTGCACACATGATGTGCAATGGGTGCTGGTACCTGGTCCTTAT-GTTGGCCCCCTA
451 GCGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTTGGCCCCCTA
6404459 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
516 TCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTG
* * *
6404524 CCAATAACCGTTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
581 CCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC
* **
6404589 TTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCATCAAAAATACAAGGATCACGTCTACCAAGT
646 TTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCACGTCTACCAAGT
* * * *
6404654 TTGGGACCAAAACTCCTT-CGAGAAAAATTTTAAAAAATCCCGAGTCGTAAAAAGTTTCAAAAAT
711 TTGGGGCCAAAACTCCTTCCGA-AAAAATTTTAAAAAAACCCGA-AC---CAAA---T--AAAAT
* * * * *
6404718 CGTGAAAAATAGAAACCGAGTCGTCCTGCCATGAAACTTCACGTGATGGCTTAAGGGACCATTGT
766 CATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGT
6404783 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
831 ATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
* * * *
6404838 CAAA-CCACCTACCACCCTATCGATCCA-GAACTTGCGCATCCCATATCTCTGGCCGGCGTAGTG
1 TAAACCCACCTACCACCCTATCGATCCACG-GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTG
* * * * *
6404901 CCCGCCCACCCGTCCGCCCGCTCGTTTCGTCGGTTGGCTTCGGCATACGAAGTTCATTCCTAGTC
65 CCCGCCTACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTC
* * * * *
6404966 TAAGATCAGACCAGACTGAGGGTTATAGTAGCGGGATCGGCAGTATGTAGAGGGGGACCCGACAG
130 TAAGATCAGACCAGACTGAGGGTTACAGCAGCAGGATCGGCAGCATGCAGAGGGGGACCCGAC-G
* * * *
6405031 ATCCCTGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGAGCCCGGACGCTCGTTTTGTGGGTTG
194 ATCCCTGGCTTGAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTG
* *
6405096 ACTTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAATCTAAGATCGGA
259 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC-GA
** * * * *
6405161 TTGGACCAAGGGTTGCTGCTGCACATGCTAGGCTCGGGCATGTGCTGGTGTCGCATTTTTC-TCT
323 CCGGACCGAGGGTTGC-GCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTC-
* ** * * *
6405225 GTCGAGGCACCATCATCGGAGCATCGTCGGAGAACCTGACAGGCGGCATTGGGGTTCCGGCGATC
386 GTCGAGGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCCGCATTGGGGTTCCGACGATC
6405290 GGGGGGGCCGATGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTT
451 ------G-CG--GGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTT
6405355 GG-CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
507 GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACA
* * * *
6405419 GCTTTGCTGCCAGTAGCCATTGAAGGGTCTGAAATGGGGACACTTTTTTCAAGTGGTCACAAAAT
572 GGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAAT
* * * * * *
6405484 CCTGTACACTTTGAGCTTTTAGTTGAATTTTTTTGTGCATGCCAAAAAAAATGCAAGGATCACGT
637 CTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCACGT
* *
6405549 CTACCAATTTTGGGGCCAAAACTCCTTCCGAAAATATTTTAAAAAAACCCGAATCCCAAAAATTT
702 CTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAACCCGAA--CC--AAA---
* *
6405614 TGAAAATCATGAAAAATAGAAAATGAGTCATCTTG-CATTAAACTTCACGTGAAGGC-TAA-GGA
760 T-AAAATCATGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGA
* *
6405676 CCATTGTATGAATTTACAAGCCATAAAAATGGCAATGCCATGCA-AAATATGAAGATGTGCC
824 CCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
*
6405737 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGC
1 TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
* * * * * *
6405802 CCGCCTGCCCGCCTGCTCGCTTGTTCCGTCGGTTGGCTTAGGTATACGGAGTTCATTCCCAGTCT
66 CCGCCTACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
* * * *
6405867 AAGATCAGACCAGACTGAGGGTTGCAGTAGCAGGAT-GGACAGCATGCAGAGGGAGACCCGGTCG
131 AAGATCAGACCAGACTGAGGGTTACAGCAGCAGGATCGG-CAGCATGCAGAGGGGGACCC-GACG
* * *
6405931 ATCCCTGGCTTGAGCATCCCGCCCCTCTGGCCTGCTGAGCGCCCGTACGCTCATTTCATGGGTTG
194 ATCCCTGGCTTGAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTG
* * * * *
6405996 ACTTAGGCATACGAAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCTAGTCTAATATCGAT
259 ACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGAC
* * * * **
6406061 CAGACCAAGGGTTGTTGCAACACATGCTGGGCTCGGGCATGTGCTGGTGCCATATTTTTCT
324 CGGACCGAGGGTTG-CGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCT
6406122 CCACCGAGGC
Statistics
Matches: 3330, Mismatches: 426, Indels: 258
0.83 0.11 0.06
Matches are distributed among these distances:
843 55 0.02
844 244 0.07
845 4 0.00
846 3 0.00
847 223 0.07
848 187 0.06
849 13 0.00
853 1 0.00
854 1 0.00
857 1 0.00
858 8 0.00
859 226 0.07
860 2 0.00
861 5 0.00
862 30 0.01
863 331 0.10
864 3 0.00
865 5 0.00
867 1 0.00
868 2 0.00
875 4 0.00
876 105 0.03
877 1 0.00
878 2 0.00
879 1 0.00
880 4 0.00
883 2 0.00
884 2 0.00
885 54 0.02
886 57 0.02
887 386 0.12
888 2 0.00
889 3 0.00
890 56 0.02
891 4 0.00
893 4 0.00
894 311 0.09
895 6 0.00
896 2 0.00
897 1 0.00
899 75 0.02
900 320 0.10
901 7 0.00
902 194 0.06
903 29 0.01
904 274 0.08
905 8 0.00
906 71 0.02
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (885 bp):
TAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGC
CCGCCTACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCT
AAGATCAGACCAGACTGAGGGTTACAGCAGCAGGATCGGCAGCATGCAGAGGGGGACCCGACGAT
CCCTGGCTTGAGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGGGTTGAC
TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGACCG
GACCGAGGGTTGCGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGA
GGCACCATCGTCGGAGCATCACCGGAGAACCTGACCGGCCGCATTGGGGTTCCGACGATCGCGGG
GGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTTGGCCCCCTATCCCT
CATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGT
AGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
GTTTTTAGCTGAATTTTTTTGTGCAAGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGG
GCCAAAACTCCTTCCGAAAAAATTTTAAAAAAACCCGAACCAAATAAAATCATGAAAAATAGAAA
ACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCC
ATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCC
Found at i:6406032 original size:26 final size:26
Alignment explanation
Indices: 6406002--6406053 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
6405992 GTTGACTTAG
6406002 GCATACGAAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
*
6406028 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGAAGTTCATTCCTAGTCTAA
6406054 TATCGATCAG
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.29, C:0.23, G:0.17, T:0.31
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCTAGTCTAA
Found at i:6406351 original size:26 final size:26
Alignment explanation
Indices: 6406315--6406367 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6406305 GTTGACTTAG
*
6406315 GCATACGGAGTTGATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6406341 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6406367 G
1 G
6406368 ATCGGACCAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6408845 original size:26 final size:26
Alignment explanation
Indices: 6408816--6408868 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
6408806 GTTGACTTAG
* *
6408816 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
6408842 GCATGCAGAGTTCATTCCCATTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6408868 G
1 G
6408869 ATCGGACCAA
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6413351 original size:719 final size:698
Alignment explanation
Indices: 6411993--6413501 Score: 2122
Period size: 719 Copynumber: 2.1 Consensus size: 698
6411983 GCCGGTTGAA
* * * * *
6411993 CGCCCGCACGCTCGTTTCGTGGGTTGACC-TAGGCATACGGAGTTCATTCCCAGTGTAAGATCGG
1 CGCCCGCTCACTCTTTTCGTCGGTTG-CCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGG
* * * * *
6412057 ACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGTATATGCTGGTGCCGCATTTTTCTTC
65 ATCGGACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATATGCTGATGCCGCATTTTTCTTC
* ** *
6412122 GCCGGAGCATCGTCGGAGAACCTGACCCACGGCATTGGAGTTCCGGTGATCGGGGGGCGGGGGGT
130 GCCGGAGCATCGCCAAAGAACCTGACCCACGGCATTGGAGTTCCGGCGATCGGGGGGCGGGGGGT
*
6412187 GTGCGCACATGATGTGTAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
195 GTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCA
* * * *
6412252 AACCTCGAGAACTCACACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATT
260 AACCTCGAGAACTCACACCCTTAAAGAGCATTTGAGATTTTACACGTTTGCTACCAATAGCCATT
* **
6412317 AAAGTGTTTGGAATGGGGACACATTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTA
325 AAAGTGTCTAAAATGGGGACACATTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTA
*
6412382 GCTGAATTTTTTTTTGCATGCCAAAAAAATACAAAGATCACGTCTACCAAGTTTGGGGCCAAAAC
390 GCTGAATTTTTTTGTGCATGCCAAAAAAATACAAAGATCACGTCTACCAAGTTTGGGGCCAAAAC
* * * **
6412447 ATCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAAAAGAA
455 ACCTTCCAAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAAAAGAA
* *
6412512 AACGAGTCGTCTTGCCATGAAACATCACGTGAAAGCTTAAAAGACCATTGTATGAATTTACAAGT
520 AACGAGTCGTCTTGCCATGAAACATCACATGAAAGCTTAAAAGACCATTGTATGAATTTACAAGC
* ** ** * *
6412577 CATAAAAATGGCATTGTCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCTATCGA
585 CATAAAAATGGCATTGGCACCCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAA
* * * *
6412642 TCCATGGCTTGCGCATCCCGTCTCTTTGGTCGACGTAGTGCCCGCCCGCC
650 TCCA-GGCTTGCGCATCCCGTCTCTCTAGCCGACGTAGTGCCCACCCGCC
* *
6412692 CGCCCGCTCACTCTTTTCGTCGGTTGCCTTAGGCATACAGAGTTCATTCCCAGTCCAAGATCGGA
1 CGCCCGCTCACTCTTTTCGTCGGTTGCCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
*
6412757 TCGGACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATGTGCTGATGCCGCATTTTTCTTCG
66 TCGGACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATATGCTGATGCCGCATTTTTC-T--
* * *
6412822 TCAGGGCACCATCAGCGGAGCATCGCCAAAGAACCTGACCGACGGCATTGGGGTTTCGGCGATCG
128 TC---G------C--CGGAGCATCGCCAAAGAACCTGACCCACGGCATTGGAGTTCCGGCGATC-
*
6412887 GGGGGGCCGGGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATGTTGGC
181 GGGGGG-C-GGGGGGTGTGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGC
6412952 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACACGT
244 CCCCTATCCCTCATCAAACCTCGAGAACTCACA--CCCTTAAAGAGCATTTGAGATTTTACACGT
* *
6413017 TTGCTACCAATAGCCTTTAAAGTGTCTAAAATGGGGACACTTTTTTCAAA-TGCTCACAAAATCT
307 TTGCTACCAATAGCCATTAAAGTGTCTAAAATGGGGACACATTTTTCAAATTG-TCACAAAATCT
*
6413081 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAGAAATACAAGGATCACGTCT
371 TGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA-AAATACAAAGATCACGTCT
* * *
6413146 TCCATGTTTGGGGCCAAAACGCCTTCCAAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTC
435 ACCAAGTTTGGGGCCAAAACACCTTCCAAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTC
* * * **
6413211 AAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACATGAAGGCTTAAGGGAC
500 AAAAATCATGAAAAAAAGAAAACGAGTCGTCTTGCCATGAAACATCACATGAAAGCTTAAAAGAC
6413276 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACCCAAAAATATGAAGATGTGCCTAAA
565 CATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACCCAAAAATATGAAGATGTGCCTAAA
* * *
6413341 CCCACCTACCACCCTATCAATCCAGGCTTGTGCATGCCGTCTCTCTAGCCGGCGTAGTGCCCACC
630 CCCACCTACCACCCTATCAATCCAGGCTTGCGCATCCCGTCTCTCTAGCCGACGTAGTGCCCACC
6413406 CGCC
695 CGCC
* * * ** * *
6413410 CGCCTGCCTGCCCGCTTGTTTAATCGGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGAT
1 CGCCCG-CT-CACTC-T-TTTCGTCGGTTGCCTTAGGCATACGGAGTTCATTCCCAGTCTAAGAT
* *
6413475 GGGATCGGACTGAGGGTTGTGGCAGCA
62 CGGATCGGACCGAGGGTTGTGGCAGCA
6413502 GGATCGACAG
Statistics
Matches: 711, Mismatches: 73, Indels: 29
0.87 0.09 0.04
Matches are distributed among these distances:
698 2 0.00
699 110 0.15
700 1 0.00
702 2 0.00
705 1 0.00
711 1 0.00
713 42 0.06
714 6 0.01
715 1 0.00
716 87 0.12
717 2 0.00
718 169 0.24
719 217 0.31
720 3 0.00
721 1 0.00
722 66 0.09
ACGTcount: A:0.26, C:0.24, G:0.23, T:0.26
Consensus pattern (698 bp):
CGCCCGCTCACTCTTTTCGTCGGTTGCCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGA
TCGGACCGAGGGTTGTGGCAGCACATGCTGGGCTCGGGCATATGCTGATGCCGCATTTTTCTTCG
CCGGAGCATCGCCAAAGAACCTGACCCACGGCATTGGAGTTCCGGCGATCGGGGGGCGGGGGGTG
TGCGCACATGATGTGCAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAA
ACCTCGAGAACTCACACCCTTAAAGAGCATTTGAGATTTTACACGTTTGCTACCAATAGCCATTA
AAGTGTCTAAAATGGGGACACATTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAG
CTGAATTTTTTTGTGCATGCCAAAAAAATACAAAGATCACGTCTACCAAGTTTGGGGCCAAAACA
CCTTCCAAAAAAATTTTAAAAAATCCCGAACCATAAAAAGTTTCAAAAATCATGAAAAAAAGAAA
ACGAGTCGTCTTGCCATGAAACATCACATGAAAGCTTAAAAGACCATTGTATGAATTTACAAGCC
ATAAAAATGGCATTGGCACCCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCAAT
CCAGGCTTGCGCATCCCGTCTCTCTAGCCGACGTAGTGCCCACCCGCC
Found at i:6415668 original size:709 final size:711
Alignment explanation
Indices: 6413602--6415764 Score: 3138
Period size: 709 Copynumber: 3.0 Consensus size: 711
6413592 TGGGTTGACC
* *
6413602 TAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAAACCGAGGGTTGCGGCAGCACATGCT
1 TAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGTGGCAGCACATGCT
* *
6413667 GGGCTCGGGTATGTGCTGGTGCCGCATTTTTC-T--T-------CATCG-GAGCATCGTCGGAGA
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGCACCATCGCGAGCATCGCCGGAGA
* * * * * *
6413721 ACCTGACCCACGGCATTGGAGTTCCGGTGATC-GGGGGGCCGGGGGGTGTGCGCACATGATATGT
131 ACCTGACCGACGACATTGGGGTTTCGGTGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
*
6413785 AATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
196 AATAGGTGCTGG-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
6413850 --CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGT-TTAGAAT
260 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTGA-AAT
* *
6413912 AGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTCTAGCTGAATTTTTTTT
324 GGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTT
* *
6413977 GCACGCC-AACAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAACCTTCCAAAAAAA
389 GCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAACCTTCC-AAAAAA
*
6414041 TTTTAAAAAATCCCGAATCGAAAAAAGGTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTG
453 TTTTAAAAAATCCCGAACCGAAAAAA-GTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTG
6414106 CCATGAAACATCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
517 CCATGAAACATCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*
6414171 TGGCATGCAGTAGTATGAAGATGTGCCTAAACCCTCCTACCACCCCATCGATCCACGGCTTGCGC
582 TGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCCATCGATCCACGGCTTGCGC
*
6414236 ATCCCGTCTCTCTGGTGGGCGTAGTGCCCGCCCGCCCATCCGTCCGCCCGCCCGCTCTTTTTGTC
647 ATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCG--C--CCGTCCG--C-CCC-CTCTTTTTGTC
6414301 GGTTGGCT
704 GGTTGGCT
* * * * *
6414309 TAGGCATACGGAGTTCATTCCTAGTCTAAGATTGGACCGGATCGAGGGTTCTAGCAGCACATGCT
1 TAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGTGGCAGCACATGCT
* * *
6414374 GGGCTCGGGCATGAGCTGGTGCCGCATTTTTCTTCGTCGAGGCACCATCGTCGGAGCATCACCAG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCG-GGCACCATCG-C-GAGCATCGCCGG
*
6414439 AGAACCTGACCGAC-AGCATTGGGGTTTCAGTGATCGGGGGGGCCGGGGGGTTGTGCGCACATGA
128 AGAACCTGACCGACGA-CATTGGGGTTTCGGTGATCGGGGGGGCCGGGGGG-TGTGCGCACATGA
*
6414503 TGTGCAATAGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCTCTCATCAAACCTCGAGAAC
191 TGTGCAATAGGTGCTGG-ACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
* *
6414568 TTACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTG
255 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTG
* *
6414633 GAATGGGGACACCTTTCTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
320 AAATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA--TT
*
6414698 TTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAACCTTCCA
383 TTTTTTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAACCTTCCA
*
6414763 AAAAATTTTCAAAAAATCCCAAACCGAAAAAAGTTTGAAAATCATGAAAAATAGAAAACGAGTCA
448 AAAAATTTT-AAAAAATCCCGAACCGAAAAAAGTTTGAAAATCATGAAAAATAGAAAACGAGTCA
* * *
6414828 TCTTGCCATGAAACATCACGTGAAGGCTTAAAGGACCACTGTATGAATTTGCAAGCCATAAAAAT
512 TCTTGCCATGAAACATCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAAT
6414893 GGCATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCCATCGATCCACGGCT
577 GGCATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCCATCGATCCACGGCT
* *
6414958 TGCGCATCCCATCTCTCTCGTCGGCGTAGTGCCCGCCCGCCCGTCCGCCCCCTCTTTTTGTCGGT
642 TGCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGTCCGCCCCCTCTTTTTGTCGGT
6415023 TGGCT
707 TGGCT
*
6415028 TAGGCATACAGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGTGGCAGCACATGCT
1 TAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGTGGCAGCACATGCT
** * *
6415093 ACGCTCAGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCGCCGG
66 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGCACCATCG-C-GAGCATCGCCGG
*
6415158 AGAACCTGACCGACGACATTGGGGTTTCGGCGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
128 AGAACCTGACCGACGACATTGGGGTTTCGGTGATCGGGGGGGCCGGGGGGTGTGCGCACATGATG
6415223 TGCAAT-GG-G-T-G-C-TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
193 TGCAATAGGTGCTGGACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
6415282 CACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCC-TTCAAAGTGTCTGAA
258 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATT-AAAGTGTCTGAA
* *
6415346 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT-GAGTTTTTAGCTGAATTTTTT
322 ATGGGGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* **
6415410 TGTGCATGCCAAAAAAAATACATGGATCACGTCTACCAAGTTT-GGGCCAAAATGCCTTCCGAAA
387 T-TGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAACCTTCC-AAA
* * ** * *
6415474 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAGTTGTGAAAAATAGAAAATGAGTCGTC
450 AAATTTTAAAAAATCCCGAACCGAAAAAAGTTTGAAAA-TCATGAAAAATAGAAAACGAGTCATC
* ** * *
6415539 TTGCCATGAAACTTCATGTGAAGGCTTAGGGGACCATTGTAAGAATTTACAAGCCACAAAAATGG
514 TTGCCATGAAACATCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGG
*** * * *
6415604 CATTGGCAAATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
579 CATTGGCATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCCATCGATCCACGGCTTG
* * ** * ** **
6415669 CGCATCCCGTCTCTCTGGCCGGTGTAGTGCCCGTTCGCCCGCCCGCCTGCT-TATTTCATCGGTT
644 CGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGTCCGCCCCCTCT-TTTTGTCGGTT
6415733 GGCT
708 GGCT
* * *
6415737 TAGGCACATGGAGTTCATTACCAGTCTA
1 TAGGCATACGGAGTTCATTCCCAGTCTA
6415765 GGATCAGACC
Statistics
Matches: 1319, Mismatches: 106, Indels: 60
0.89 0.07 0.04
Matches are distributed among these distances:
707 88 0.07
708 52 0.04
709 266 0.20
710 18 0.01
711 142 0.11
712 1 0.00
714 1 0.00
715 1 0.00
716 1 0.00
717 2 0.00
718 26 0.02
719 178 0.13
720 5 0.00
721 39 0.03
722 14 0.01
723 85 0.06
725 112 0.08
726 1 0.00
727 219 0.17
728 68 0.05
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (711 bp):
TAGGCATACGGAGTTCATTCCCAGTCTAAGATTGGACCAGACCGAGGGTTGTGGCAGCACATGCT
GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGCACCATCGCGAGCATCGCCGGAGA
ACCTGACCGACGACATTGGGGTTTCGGTGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGC
AATAGGTGCTGGACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTGGCCATTAAAGTGTCTGAAATGG
GGACACCTTTTTCAAATTGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTTGC
ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAAACCTTCCAAAAAATTT
TAAAAAATCCCGAACCGAAAAAAGTTTGAAAATCATGAAAAATAGAAAACGAGTCATCTTGCCAT
GAAACATCATGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
ATGCAGTAATATGAAGATGTGCCTAAACCCTCCTACCACCCCATCGATCCACGGCTTGCGCATCC
CGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGTCCGCCCCCTCTTTTTGTCGGTTGGCT
Found at i:6417421 original size:26 final size:26
Alignment explanation
Indices: 6417385--6417437 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6417375 GTCGACTTAG
*
6417385 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6417411 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6417437 G
1 G
6417438 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6418127 original size:26 final size:26
Alignment explanation
Indices: 6418098--6418148 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
6418088 TTGGCTTAGG
*
6418098 ATACAGATTTCATTCCCAGTCTAAGC
1 ATACAGAGTTCATTCCCAGTCTAAGC
*
6418124 ATACCGAGTTCATTCCCAGTCTAAG
1 ATACAGAGTTCATTCCCAGTCTAAG
6418149 GTCGGATCGA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.27, G:0.14, T:0.29
Consensus pattern (26 bp):
ATACAGAGTTCATTCCCAGTCTAAGC
Found at i:6418584 original size:724 final size:711
Alignment explanation
Indices: 6417191--6418586 Score: 1845
Period size: 724 Copynumber: 1.9 Consensus size: 711
6417181 GTTCCCACCG
* * *
6417191 GCCCGCCCACCTGCTCGTTTTGTCGGTTGGCTTAGGCATACGAAGTTCATTCCAGTCTAAGATCA
1 GCCCGCCCACCCGCTCGTTTCGTCGGTTAGCTTAGGCATACGAAGTTCATTCCAGTCTAAGATCA
** * * * * *
6417256 GACTGGACCGAGGGTTGTGACAGTAGGATCGACAGCACGCAGTGGGGTACCTGGCTGATCCCCGG
66 GACCAGACCGAGGGTTGTGACAGCAGGATCGACAGCACGCAGAGGGGGACCAGGCTAATCCCCGG
* * * * *
6417321 CTTGTGTATCCCGCCCCTCTGGCCGGCTGAGCGCCCACATGCTCATTTCCGTGGGTCGACTTAGG
131 CTTGCGCATCCCGCCCCTCTGGCCGACGGAGCGCCCACACGCTCATTTCCGTGGGTCGACTTAGG
** * * *
6417386 CATATGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACC
196 CATACAGAGTTCATTCCCAGTCTAAGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCGAACA
* * **
6417451 GAGGGTTGCAACAGCACATGCTGGGCTCAGGCATGTGCTGTGCGTCTTTTTCTTCGTCGGGGCAC
261 GAGGGTTCCAACAGCACATGCTGGGCTCAGGCATGTGCTGTGCGTATTTTTCTTCCCCGGGGCAC
* *
6417516 CATCGTCAGAGAACCTGACCGGCGGCATTAGGGTTCCAGCGATCGGGGGGGTGGGGGGTGTGCAC
326 CATCGTCAGAAAACCTGACCGGCGGCATTAGGGTTCCAGCGATCGGGGGGGTCGGGGGTGTGCAC
** * * *
6417581 GGATGATGTGTGATGGGTGCTGGTACTTGGCCCCTATATTGGCCCCTTATCCCTCATCAAACCTC
391 ACATGATGTGCGATGGGTGCTGGCACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAACCTC
*
6417646 AAGAACTCACACCCCATTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
456 AAGAACTCACACCCCATTAAAGAGCATTTGAAATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
6417711 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGTGTTTTTAGCTA
521 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTCGTACACTTCGTGTTTTTAGCTA
* * * * * *
6417776 ATGTTTTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTATCAAGTTTGGGACCAAAACTCC
586 ATGTTTTTTATGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGACAAAAAATCA
* *
6417841 TTCCAACAAAATTTTAAAAAATACCAAGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGT
651 TTCCAAAAAAATATTAAAAAATACCAAGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGT
* *
6417902 GCCCGCCCGCCCGCTCGTTTCGTCGGTTTATCTTAGGCATAC-AGAGTTCATTCCCAGTCTAAGA
1 GCCCGCCCACCCGCTCGTTTCGTCGG-TTAGCTTAGGCATACGA-AGTTCATT-CCAGTCTAAGA
* * * * * *
6417966 TCGGACCAGACTGAGGGTTGTGGCAGCAGGATCGGCAGCACGTAGAGGGGGACCCAGTC-AATCC
63 TCAGACCAGACCGAGGGTTGTGACAGCAGGATCGACAGCACGCAGAGGGGGA-CCAGGCTAATCC
* * * * * *
6418030 CCGGCTTGCGCATCTCGCCCCTCTGGCCGACGGAGCGGCCGCACGCTCATTT-TGTGGGTTGGCT
127 CCGGCTTGCGCATCCCGCCCCTCTGGCCGACGGAGCGCCCACACGCTCATTTCCGTGGGTCGACT
* * *
6418094 TAGG-ATACAGATTTCATTCCCAGTCTAAGCATACCGAGTTCATTCCCAGTCTAAGGTCGGATCG
192 TAGGCATACAGAGTTCATTCCCAGTCTAAGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCG
* * * * *
6418158 AATAGAGGGTTCCGATAGTACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCCCCG
257 AACAGAGGGTTCCAACAGCACATGCTGGGCTCAGGCATGTGCT-GTG-CGTATTTTTCTTCCCCG
*
6418223 GGGCACCATGACCGGAGCATCATCGAAAAACCTGACCGGCGGCATTGGGGTTCC-GACGATCGGG
320 GGGCACCAT---C---G--TCA--G-AAAACCTGACCGGCGGCATTAGGGTTCCAG-CGATCGGG
* * *
6418287 GGGGTCGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGCAGTTGGCCCTTATATTGGCCCCC
373 GGGGTCGGGGGTGTGCACACATGATGTGCGATGGGTGCTGGCACTTGGCCCCTATATTGGCCCCC
** * * * *
6418352 TATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAGGGGCATTTGAAATTTTACATGTTTGC
438 TATCCCTCATCAAACCTCAAGAACTCACACCCCATTAAAGAGCATTTGAAATTTTACAGGTTTGC
* *
6418417 TGCCGGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTGACAAAATCTCGTAC
503 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTCGTAC
* *
6418482 ACTTCGAT-TTTTTAGCTGAAT-TTTTTTATGCGTGCCAACAAAAATACAAGGATCACATCTACC
568 ACTTCG-TGTTTTTAGCT-AATGTTTTTTATGCATGCCAAAAAAAATACAAGGATCACATCTACC
*
6418545 AAGTTTGGGGCAAAAAATCATT-CAAAAACAATATTAAAAAAT
631 AAGTTTGGGACAAAAAATCATTCCAAAAA-AATATTAAAAAAT
6418587 CCCGAACTGC
Statistics
Matches: 586, Mismatches: 78, Indels: 29
0.85 0.11 0.04
Matches are distributed among these distances:
711 113 0.19
712 37 0.06
713 124 0.21
714 4 0.01
716 1 0.00
719 1 0.00
721 3 0.01
723 7 0.01
724 292 0.50
725 4 0.01
ACGTcount: A:0.23, C:0.25, G:0.26, T:0.26
Consensus pattern (711 bp):
GCCCGCCCACCCGCTCGTTTCGTCGGTTAGCTTAGGCATACGAAGTTCATTCCAGTCTAAGATCA
GACCAGACCGAGGGTTGTGACAGCAGGATCGACAGCACGCAGAGGGGGACCAGGCTAATCCCCGG
CTTGCGCATCCCGCCCCTCTGGCCGACGGAGCGCCCACACGCTCATTTCCGTGGGTCGACTTAGG
CATACAGAGTTCATTCCCAGTCTAAGCATACCGAGTTCATTCCCAGTCTAAGATCGGACCGAACA
GAGGGTTCCAACAGCACATGCTGGGCTCAGGCATGTGCTGTGCGTATTTTTCTTCCCCGGGGCAC
CATCGTCAGAAAACCTGACCGGCGGCATTAGGGTTCCAGCGATCGGGGGGGTCGGGGGTGTGCAC
ACATGATGTGCGATGGGTGCTGGCACTTGGCCCCTATATTGGCCCCCTATCCCTCATCAAACCTC
AAGAACTCACACCCCATTAAAGAGCATTTGAAATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTCGTACACTTCGTGTTTTTAGCTA
ATGTTTTTTATGCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGACAAAAAATCA
TTCCAAAAAAATATTAAAAAATACCAAGGCTTGTGCATCCCGTCTCTCTGGCCGACGTAGT
Found at i:6419034 original size:26 final size:26
Alignment explanation
Indices: 6418998--6419050 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6418988 GTTGAGTTAG
*
6418998 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6419024 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6419050 G
1 G
6419051 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6419928 original size:26 final size:26
Alignment explanation
Indices: 6419892--6419944 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6419882 GTTGACTTAC
*
6419892 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6419918 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6419944 G
1 G
6419945 ATCGGACTGT
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6421021 original size:899 final size:899
Alignment explanation
Indices: 6417868--6423344 Score: 7189
Period size: 899 Copynumber: 6.1 Consensus size: 899
6417858 AAAATACCAA
*
6417868 GGCTTGTGCATCCCGTCTCTCTGGCCGACGTAG-T---GCCCGCCCGCCCGCTCGTTTCGTCGGT
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCGG-
** * *
6417929 TTATCTTAGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGTGGCAGCA
65 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC-GAGGGTTGCGGCAGCA
* * * * *
6417994 GGATCGGCAGCACGTAGAGGGGGACCC-AGTCAATCCCCGGCTTGCGCAT-CTCGCCCCTCTGGC
129 GGATCGACAGCACGCAGAGGGGGACCCGA-CCGATCCCCGACTTGCGCATCCT-GCCCCTCTGGC
* * * * * * * *
6418057 CGACGGAGCGGCCGCACGCTCATTTTGTGGGTTGGCTTAGG-ATACAGATTTCATTCCCAGTCTA
192 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * ** * * *
6418121 AGCATACCGAGTTCATTCCCAGTCTAAGGTCGGATCGAATAGAGGGTTCCGATAGTACATGCTGG
257 AGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGG
* * *
6418186 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCCCCGGGGCACCAT-GACCGGAGCATCATCGAA
322 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCG-CCGGAGCATCATCGGA
* * *
6418250 AAACCTGACCGGCGGCATT-GGGGTTCCGACGATCGGGGGGGTC-GGGGGTGTGCGCACATGATG
386 GAACCTGACCGGCGGCATTAGGGTTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGATG
* * *
6418313 TGCGATGGGTGCTGGCAGTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTC
451 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * * * *
6418378 ACACCCCCTTAAGGGGCATTTGAAATTTTACATGTTTGCTGCCGGTAGCCATTAAAGTGTCTGAA
516 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
6418443 ATGGGGACACTTTTTTCAAATGGTGACAAAATCTCGTACACTTCGATTTTTTAGCTGAATTTTTT
581 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * * * *
6418508 TATGCGTGCCAACAAAAATACAAGGATCACATCTACCAAGTTTGGGGCAAAAAATCATT-CAAAA
646 TGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* *
6418572 ACAATATTAAAAAATCCCGAA-CTGCAAAAAGTTTTC-AAAATCTTGAAAAATAGAAAACGAGTC
711 A-AATTTTAAAAAATCCCGAACCT-CAAAAAG-TTTCAAAAATCGTGAAAAATAGAAAACGAGTC
*
6418635 GTCTTGCCATGAAACTTCACGTGAAGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
773 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
***
6418700 TGGCATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
838 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * ** * *
6418762 GGCATGCGCATCCCGTCTCTCTAGCCGGTGTAGTGCTCGCCCGCCCACCCGTCCGCTCGTTTCGT
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGT--T--CCCGCCCGCCCGCCCGCTCGTTTCGT
* * * * * *
6418827 CGGTTGGCTTAGGCATACGGAGTTCATTCCTAATCTAAGATCAGACCAGATTGAGGGTTGCTGTA
62 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGGGTTGCGGCA
* * * * * * * * *** **
6418892 GCAGAATC-AGCAGCATGTAAAAGGAGACCCGGCCAATTTTCGACTTGCGCATCCCACCCCTCTG
126 GCAGGATCGA-CAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCTGCCCCTCTG
* * * * *
6418956 GCTGGCTGAGCGCCCGCACGCTCGTTTTGTAGGTTGAGTTAGGCATACGGAGTTCATTCCCATTC
190 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* *
6419021 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCGAGGGTTACGGCAGCACATGCT
255 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCT
* * * * * * *
6419086 GTGCCCGGGCATGTGCTGGTGCGGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCGTCAG
320 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCATCGG
*
6419151 AGAACCTGACCGGCGGCATT-GGGGTTCC-AGCGATCGGGGGGGCCAGGGGGTGTGCGCACATGA
385 AGAACCTGACCGGCGGCATTAGGGTTTCCGA-CGATCGGGGGGGCCAGGGGGTGTGCGCACATGA
* *
6419214 TGTGCGATGGGTGCTGGTACATGGCCCTTATATTGGCACCCTATCCCTCATCAAACCTCGAGAAC
449 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
*
6419279 TCACACCCCCTTAAAAAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAAG-CATTAAAGTGTCT
514 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGT-AGCCATTAAAGTGTCT
* *
6419343 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAACTT
578 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTT
* *
6419408 TTTTGTGCACGCCAAAAAAAATACAAGGATCAAGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
643 TTTTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCA
** *
6419473 AAAAAATTTTAAAAAATCCCGAACC-CAAAAAGTTTCAAAAATCACGAAAAATAGAAAAGGAGTC
708 AAAAAATTTTAAAAAATCCCGAACCTCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTC
* * *
6419537 GTCTTGCCATGAAACTTCACGTGAAGG-TCTAATGGACCGTTGTATGAATTTACAAGTCATAAAA
773 GTCTTGCCATGAAACTTCACGTGAAGGCT-TAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* *
6419601 ATGGCATTGGCATGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAT
837 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * *
6419664 GGCTTGGGCATCCCGTCTCTCTGGCCGACGTAG-T---GCCTGCCCGCCCGCTCTTTTCGTTGGT
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
* * * *
6419725 TGCCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACTAAGGGTTGCGGCAGTAG
66 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGAC-GAGGGTTGCGGCAGCAG
** * ** *
6419790 GATCGGTAGCATGCAGAGGGGGACCCGACCGATCCCTAACTTGCGCAT-CTCGCCCGTCTGGCCG
130 GATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCT-GCCCCTCTGGCCG
* * * * *
6419854 ACTAAGCGCCCGCACGCTCGTTTTGTGGGTTGACTTACGCATACGGAGTTCATTCCTAGTCTAAG
194 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * *
6419919 CATACGGAGTTCATTCCCAGTCTAAGATCGGACTGTATCTAGGGTTACGACAGCACATGCTGGGC
259 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGGC
* ** * * * * *
6419984 TCAGGTTTGTGCTGGTGCCGCATTTTTCTTCACCGAGGCACCATCACTGGACCATCACCGGAGAA
324 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCATCGGAGAA
* * * * * *
6420049 CCTAACCGGCAGCATT-GGGGTTCCGGCGATCAGGGGGGCCAGGGGGTGTGCGTACATGATGTGC
389 CCTGACCGGCGGCATTAGGGTTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGATGTGC
*
6420113 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACA
454 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
6420178 CCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTAAAATG
519 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* *
6420243 GGGACACTTTTTTCAAATGGTCACAAAATCTTTTACACTTCGAGTTTTTAGCTGAATATTTTTGT
584 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * **
6420308 GCATGCCAACAAAAATACAACGATCACGTCTACCAAATTTGGGGCCAAAACTTTTTCCAAAAAAA
649 GCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAA
* * *
6420373 TTTTAAAAAATCCCGAACCTCAAAAAGTTTCAAAAATCGTGAAAAAGAGAAAACAAGTCATCTTG
714 TTTTAAAAAATCCCGAACCTCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* * *
6420438 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTTTTAATTTACATGCCATAAAAATGGCAT
779 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * *
6420503 TGGCATGCAGAAATATGAAGATGTGCTTAAACCCACCTGCCACCCTATCGATCCAT
844 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * *
6420559 GGCTTGCGAATCCCGTCTCTCTGGCTGACATAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
* * * * * *
6420624 TGGCTTAGGCATACGGAGTTCATTCCTAGTCTATGATTGAACCAGATCGAGGCTTGCGGCAGCAA
66 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGGGTTGCGGCAGCAG
* * ** * * * * * *
6420689 GATCGACAGCATGCAGCGGGGGAATCGACCGATCCCTGGCTTGCTCATGCTGCTCCTATGGCCGG
130 GATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCTGCCCCTCTGGCCGG
* *
6420754 CTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATGCGGAGTTCATTCCCAGTCTAAGC
195 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGC
* * * * *
6420819 ATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGGCTGAGGGTTGCGGCAGCACATGCTGGGCT
260 ATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGGCT
* *
6420884 CAGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCACCGGAGAAC
325 CGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCATCGGAGAAC
* * * * **
6420949 CTGACCGACGGCATTAGGGTTTCAG-CGTTCGGGGGGTCGGGGGGGTGTGCGCACATGATGTGCG
390 CTGACCGGCGGCATTAGGGTTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGATGTGCG
**
6421013 ATGGGTGCTGGTACTTGGATCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
455 ATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACAC
* *
6421078 ACCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCTTTAAAGTGTCTGAAATGG
520 CCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGG
* * * *
6421143 GGACACTTTCTTCAAATGGTTACAAAATCTTGTACACTTTGAGTTTTTACCTGAATTTTTTTGTG
585 GGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTG
* * * *
6421208 CATGCCAAAAAAATATACAAGGATAACATCTACCAAGTGTGGGGCCAAAA-TGCCTTCCGAAAAA
650 CATGCCAAAAAAA-ATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACT-CCTTCCAAAAAA
* * * *
6421272 ATTTTAAAAAATCCTGAACCGT-AAAAAGTTTCCAAAATCATGAAAAATAGAAAACTAGTCGTCT
713 ATTTTAAAAAATCCCGAACC-TCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
6421336 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAATTGGC
777 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* ** *
6421401 ATTGGTATGTGGAAATGTGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
842 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * * * *
6421459 GGCTTGCGCATCCAGTGTCTCTGGCCGGCGTAGTGCCCACCCGCACGCCCGCCTGCTCGTTTTGT
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGT----TCCCGCCCGCCCGCCCGCTCGTTTCGT
* *
6421524 CGGTTGGCTTATGCATACGGAGTTCATTCCCAGTCTAAGATCGGACC-GAACCAAGGGTTGCGGC
62 CGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAG-A-CGAGGGTTGCGGC
* * * *
6421588 AGCAGGATCGACAGCACACAGAGGGGGACCCGACTGATCCCCGACTTACGCATCCCGCCCCTCTG
125 AGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCTGCCCCTCTG
* ** * * * ** * *
6421653 GCCGGTTGAGCGCCTACACGCCCGTTTCGTAGGTTGATTTAGGCATACATAGTTCGTTCCTAGTC
190 GCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTC
* * *
6421718 TAAGCATACGGAGTTCATTCCCAGTCTAAGATTGGATCAGACCGAGGGTTACGACAGCACATGCT
255 TAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCT
* * ** * *
6421783 GGGCTCGGGCATGTGCTGGAGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGTCAG
320 GGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCATCGG
* * * *
6421848 AGAACCTGACCGGCGGC-TTTGGGGTTCCGACGGTCGGGGGGGCCAGGCGGTGTGCGCACATGAT
385 AGAACCTGACCGGCGGCATTAGGGTTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGAT
* * * *
6421912 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTCGCCGCATATCCCTCATTAAACCTCGAGAACT
450 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
6421977 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
515 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
6422042 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCGAGTTTTTAGCTGAATTGTT
580 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* *
6422107 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTTCCCAA
645 TTGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
*
6422172 AAAATTTTAAAAAATCCCGAACAAT-AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
710 AAAATTTTAAAAAATCCCGAAC-CTCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCG
*
6422236 TCTTGCCATTAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
774 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * * *
6422301 GGCAATT-GCATGCAGAAATATGAAGATGTGCCAAAACTCATCTACCACCCTATCGATCTAC
839 GGC-ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * * * * * *
6422362 AGCTTGCGCATCCCGTCTCTCTGGCCGGCATAATGCCCGCCCACCCGCCCACTCGTTTCGTCGAT
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
* * * * * * *
6422427 TGGCTTAGGCATACGGAGTTCACTCTCAGTCTAAGATTGGACCAAACCGACGGTTACGGCAGTAG
66 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGA-CGAGGGTTGCGGCAGCAG
* * *
6422492 GATCGGCAGCACACAGAGGGGGACCCGACCGATCCCC-AGCTTGCGCATCCTGCCCCTCTGGCTG
130 GATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGA-CTTGCGCATCCTGCCCCTCTGGCCG
* * * *
6422556 GCTGAGCGCCCGCATGCTCATTTCATGGGTTGACTTAGGCATACGAAGTTCATTCCCAGTCTAAG
194 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * * ** *
6422621 CATAC-GAGTTCATTCCCAGTATAAGATCAGACTGGACCGAGTGTTGTGATAGCACATG-TGGGC
259 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGGC
***
6422684 TCGGGCATGTGCTGGTGTCC-CATTTTTCTTCGTTGGGGCACCATCGCC---G----A----AGA
324 TCGGGCATGTGCTGGTG-CCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCATCGGAGA
* * * *
6422737 ACCTGGCCGACGGTATTAGGG-TTCCGACGATCGGGGGGGCC-GAGGGGTGTGCGGACATGATGT
388 ACCTGACCGGCGGCATTAGGGTTTCCGACGATCGGGGGGGCCAG-GGGGTGTGCGCACATGATGT
**
6422800 GCGATGGGTGCTGGTACTTGGCCCTTATATTCACCCCCTATCCCTCATCAAACCTCGAGAACTCA
452 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
6422865 CCCCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
517 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
** * *
6422930 TGGGGACGTTTTTTTCAAATGGTCACAAAATATTGTACACTTCGAGTGTTTA-CTTGAATTTTTT
582 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGC-TGAATTTTTT
* * * *
6422994 TATGCATGCCAACAAAAATACAAGGATCTCGTCTACCAAGTTTTGGGCCAAAACTCCTTCCAAAA
646 TGTGCATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAA
* * *
6423059 TAATTTTAAAAAATCCTGAA-CTGCAAAAAGTTTCAAAAATCGTGAAAAACAGAAAACGAGTCGT
711 AAATTTTAAAAAATCCCGAACCT-CAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGT
* *
6423123 CTTGCCACGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
775 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
*
6423188 GCATTGGCATGCAG-AATACGTGAAGATGTGCCCAAACCCACCTACCACCCTATCGATCCAC
840 GCATTGGCATGCAGAAATA--TGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
* * * *
6423249 GGCTTGCGCATCCCGTCTCTTTGGCCGACGTAG-T---GCCTGCCTGCCTGCTCGTTTCGT-GCG
1 GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCG-G
* * *
6423309 TTGACTTAGGCATATGAAGTTCATTCCCAGTCTAAG
65 TTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAG
6423345 CATATGGAGT
Statistics
Matches: 4009, Mismatches: 515, Indels: 129
0.86 0.11 0.03
Matches are distributed among these distances:
882 1 0.00
883 49 0.01
884 1 0.00
885 9 0.00
886 420 0.10
887 70 0.02
893 3 0.00
894 631 0.16
895 178 0.04
896 2 0.00
897 48 0.01
898 46 0.01
899 734 0.18
900 246 0.06
901 139 0.03
902 366 0.09
903 515 0.13
904 551 0.14
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
GGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTTCCCGCCCGCCCGCCCGCTCGTTTCGTCGGT
TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACGAGGGTTGCGGCAGCAGG
ATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCGACTTGCGCATCCTGCCCCTCTGGCCGGC
TGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCACATGCTGGGCTC
GGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGCCGGAGCATCATCGGAGAACC
TGACCGGCGGCATTAGGGTTTCCGACGATCGGGGGGGCCAGGGGGTGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATT
TTAAAAAATCCCGAACCTCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCC
ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAC
Found at i:6421725 original size:26 final size:26
Alignment explanation
Indices: 6421695--6421747 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
6421685 GTTGATTTAG
* * *
6421695 GCATACATAGTTCGTTCCTAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
6421721 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6421747 G
1 G
6421748 ATTGGATCAG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6422223 original size:26 final size:26
Alignment explanation
Indices: 6422171--6422228 Score: 62
Period size: 26 Copynumber: 2.2 Consensus size: 26
6422161 ATCCTTCCCA
* *
6422171 AAAAATTTTAAAAAATCCCGAACAAT
1 AAAAAGTTTAAAAAATCCCGAAAAAT
* **
6422197 AAAAAGTTTCAAAAATCGTGAAAAAT
1 AAAAAGTTTAAAAAATCCCGAAAAAT
6422223 AGAAAA
1 A-AAAA
6422229 CGAGTCGTCT
Statistics
Matches: 26, Mismatches: 5, Indels: 1
0.81 0.16 0.03
Matches are distributed among these distances:
26 22 0.85
27 4 0.15
ACGTcount: A:0.60, C:0.10, G:0.09, T:0.21
Consensus pattern (26 bp):
AAAAAGTTTAAAAAATCCCGAAAAAT
Found at i:6422634 original size:25 final size:26
Alignment explanation
Indices: 6422594--6422645 Score: 88
Period size: 25 Copynumber: 2.0 Consensus size: 26
6422584 GTTGACTTAG
*
6422594 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTATAA
6422620 GCATACG-AGTTCATTCCCAGTATAA
1 GCATACGAAGTTCATTCCCAGTATAA
6422645 G
1 G
6422646 ATCAGACTGG
Statistics
Matches: 25, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 18 0.72
26 7 0.28
ACGTcount: A:0.31, C:0.25, G:0.17, T:0.27
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTATAA
Found at i:6423355 original size:26 final size:26
Alignment explanation
Indices: 6423318--6423370 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6423308 GTTGACTTAG
*
6423318 GCATATGAAGTTCATTCCCAGTCTAA
1 GCATATGAAGTTCATTCCCAGCCTAA
*
6423344 GCATATGGAGTTCATTCCCAGCCTAA
1 GCATATGAAGTTCATTCCCAGCCTAA
6423370 G
1 G
6423371 ATCGGATCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATATGAAGTTCATTCCCAGCCTAA
Found at i:6424249 original size:26 final size:26
Alignment explanation
Indices: 6424213--6424265 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6424203 GTTGACTTAG
*
6424213 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
*
6424239 GCATATGGAGTTCATTCCCAGCCTAA
1 GCATACGGAGTTCATTCCCAGCCTAA
6424265 G
1 G
6424266 ATCGGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGCCTAA
Found at i:6424701 original size:28 final size:26
Alignment explanation
Indices: 6424645--6424704 Score: 66
Period size: 27 Copynumber: 2.2 Consensus size: 26
6424635 AAACCTTCTG
**
6424645 AAAAAATTTTAAAAAATCTCAAACTT
1 AAAAAATTTTAAAAAATCTCAAAAAT
* *
6424671 AAAAAATTTTTTAAAAATCATGAAAAAT
1 AAAAAA-TTTTAAAAAATC-TCAAAAAT
6424699 AAAAAA
1 AAAAAA
6424705 CGAGTCGTCT
Statistics
Matches: 28, Mismatches: 4, Indels: 2
0.82 0.12 0.06
Matches are distributed among these distances:
26 6 0.21
27 11 0.39
28 11 0.39
ACGTcount: A:0.63, C:0.07, G:0.02, T:0.28
Consensus pattern (26 bp):
AAAAAATTTTAAAAAATCTCAAAAAT
Found at i:6426117 original size:401 final size:399
Alignment explanation
Indices: 6425360--6426557 Score: 2012
Period size: 401 Copynumber: 3.0 Consensus size: 399
6425350 CCATAAAAGA
* *
6425360 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT-TTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
* * * * * *
6425424 TGAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT-AAATTTTTTGTGCTTGCCTACAA
66 TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* **
6425488 AAATACAAGGA-T-CATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAA
131 AAATACAAGGATTGCATG--TACCAAGTTTGGGGCCAAAACACCTTCTGAAAAAATTTTAAAAAA
* *** * ** * * *
6425551 TCTCGAACCGCAAAAA-GTTTCGAAAATCTTGAAAAAGAGAAAACGAGTTGTCTTGCCATGAAAC
194 TCTCAAACTTAAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
* *
6425615 TTCATGTGAAGGCTTAAGGGACCATAGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGA
259 TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGA
*
6425680 GAAATATGAAGATGTGCCTAAACCCACCAACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCT
324 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCT
6425745 CTCTGGTCGAC
389 CTCTGGTCGAC
6425756 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
6425821 TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
*
6425886 AAATACAAGGATTGCATGTACCAAGTTTGGGGCCAAAACGCCTTCTGAAAAAATTTTAAAAAATC
131 AAATACAAGGATTGCATGTACCAAGTTTGGGGCCAAAACACCTTCTGAAAAAATTTTAAAAAATC
6425951 TCAAACTTAAAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
196 TCAAACTT-AAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
6426016 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTTACAAGCCATAAAAATGGCATTGGCATGGA
260 TCACGTGAAGGCTTAAGGGACCATTGTATGAA-TTTACAAGCCATAAAAATGGCATTGGCATGGA
*
6426081 GAAATATGAAGATGTGCCTACACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCT
324 GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCT
6426146 CTCTGGTCGAC
389 CTCTGGTCGAC
6426157 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
6426222 TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * *
6426287 AAATACAAGGATTGCGTGTACCATGTTTGGGGCCAAAAAACCTTCTGAAAAAATTTTAAAAAATC
131 AAATACAAGGATTGCATGTACCAAGTTTGGGGCCAAAACACCTTCTGAAAAAATTTTAAAAAATC
6426352 TCAAACTTAAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
196 TCAAACTTAAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
*
6426417 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
261 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGA
* *
6426482 AATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACA-ACTTGCGCATCCCCGTCT
326 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA-AGGCTTGCGCAT-CCCGTCT
6426546 CTCTGGTCGAC
389 CTCTGGTCGAC
6426557 G
1 G
6426558 TAGTGCCCGC
Statistics
Matches: 760, Mismatches: 33, Indels: 14
0.94 0.04 0.02
Matches are distributed among these distances:
396 60 0.08
397 41 0.05
398 79 0.10
399 90 0.12
400 185 0.24
401 305 0.40
ACGTcount: A:0.34, C:0.20, G:0.19, T:0.28
Consensus pattern (399 bp):
GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
AAATACAAGGATTGCATGTACCAAGTTTGGGGCCAAAACACCTTCTGAAAAAATTTTAAAAAATC
TCAAACTTAAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGA
AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCT
CTGGTCGAC
Found at i:6427677 original size:26 final size:26
Alignment explanation
Indices: 6427638--6427690 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
6427628 GTTGACTCAG
* **
6427638 GCATACGGAGTTCATTCCTGGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
6427664 GCATACGAATTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6427690 G
1 G
6427691 ATCGGACCGG
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:6428579 original size:26 final size:26
Alignment explanation
Indices: 6428542--6428594 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6428532 GTTGACTTAG
*
6428542 GCATACGTAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6428568 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6428594 G
1 G
6428595 ATCAGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.26, G:0.19, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6430423 original size:26 final size:26
Alignment explanation
Indices: 6430387--6430439 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6430377 GCTAACTTAG
*
6430387 GCATACGGAGTTCATTCCTAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6430413 GCATACGGAGTTCATTCCCATTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6430439 G
1 G
6430440 ATCAAACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.25, G:0.19, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6431314 original size:26 final size:26
Alignment explanation
Indices: 6431284--6431336 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6431274 GTTGACTTAG
6431284 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6431310 GCATACGGAGTTCATTCCCTGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6431336 G
1 G
6431337 ATCAGACTAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6431855 original size:893 final size:893
Alignment explanation
Indices: 6426157--6436551 Score: 12770
Period size: 892 Copynumber: 11.5 Consensus size: 893
6426147 TCTGGTCGAC
* **
6426157 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCAATTAAAGTGTCTGAAATGGGGACACTCATT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
6426222 TCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
** * * ** *
6426287 AAATACAAGGATTGCGTGTACCATGTTTGGGGCCAAAAAACCTTCTGAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *** * *
6426352 TCAAACTTAAAAAATTTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
196 CCGAACCGCAAAAA-GTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
***
6426417 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGA
260 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGA
* **
6426482 AATATGAAGATGTGCCTAAACCCACCTACCACCATATCGATCCACAACTTGCGCATCCCCGTCTC
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT-CCCGTCTC
* *
6426547 TCTGGTCGACGTAGTGCCCGCCCGCCCGTCCGACCGCTCGTTTCGTCGGTTGGATTAGGCATACG
389 TCTGGTCGGCGTAGT----GCCCGCCCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* ** * * * *
6426612 GAGTTCATT-CCAGTCTAAGAGCAGACC-AGACCAAGGGTTGAGGTAGCAGGATCGACAGCACAT
446 GAGTTCATTCCCAGTCTAAGATCAGACCGA-ACTGAGGGTTG-CGCAGCAGGATCGGCAGCACGT
* * * * *
6426675 AGAGGGGTACCCGACCGATCCCCGGTTTGTGCATCTCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
509 AGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCAC
* * * *
6426740 GCTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCAAAACATACGAAGTTCATT
574 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATT
** *
6426805 CCCAGTCTAAGATCGGACC-GCACCGAGGGTTGCGATAGCACATGCT-GGCTCGGGCATGTGCCG
639 CCCAGTCTAAGATCGGACCAG-ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTG
6426868 GTGCCGCATTTTTCTTCGTCGGGGCACCA---T-----CA-C--CGGAGAACCTGACCGACGGCA
703 GTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCA
* *
6426922 TTAGGGTTCCGACGATCGGAGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
768 TTGGGGTTCCGACGATCGG-GGGG-CTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTA
* *
6426987 CTTGGCCCTTATAATGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCATAAAAGA
831 CTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC-TTAAAGA
*
6427051 GTATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * * * *
6427115 TGAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCT-AAATTTTTTGTGCTTGCCTACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* *
6427179 AAATACAAGGATCATGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *
6427244 TCGAACCGCAAAAAGTTTCAAAAATCTTGAAAAAGAGAAAACGAGTCGTCTTGCCATGAAACTTC
196 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* ***
6427309 ATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGGAGAA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
* *
6427374 ATATGAAGATGTGCCTACACCCACCTACCACCCTATCGATCCAAGGCTTGCGCATCCCGTCTCTC
326 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* * *
6427439 TGGTCGACGCAGTGCCCACCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGCTC
391 TGGTCGGCGTAGTG----CCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
** * * * *
6427504 ATTCCCAGTCTAAGATTGGACCGAAATAAGGGTTGCGGCAGCAGGATCAGCAGCACGCAGAGGGG
452 ATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGC-GCAGCAGGATCGGCAGCACGTAGAGGGG
* * * * * *
6427569 GA-CC---CGA-------CTTGCACATCCCG-TCCTCCGACTGGCTGAGCGGCCGCACGCTC-TT
516 GACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTT
* * * ** * *
6427621 TCTATTGGTTGACTCAGGCATACGGAGTTCATTCCTGGTCTAAGCATACGAATTTCATTCCCAGT
581 TC-GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGT
* * * *
6427686 CTAAGATCGGACCGGACCGAGGGTTGCGGCAGCACATGCTAGGCTTGGGTATGTGCTGGTGCCGC
645 CTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGC
** * * *
6427751 ATTTTTCTTCACCGGGGCACCATCG-CTGGAGCATCGCCAGAGAACCTGACC-AGCGCCATTGGG
710 ATTTTTCTTCGTCGGGGCACCATCGTC-GGAGCATCGTCGGAGAACCTGACCGA-CGGCATTGGG
* *
6427814 GTTTCGACGATCGGGGGGCTGGGGGGAGGTGTGCGCACATGATGTGCGATGGGTGCTGGTATTTG
773 GTTCCGACGATCGGGGGGCT--GGGG-GGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
* * **
6427879 GCCCTTATATTGGCCCCCTATCCCTCATCAAACGTTGAGAACTCACTTCCCCTTAAAGA
835 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * * *
6427938 GCATTTGAGATTTTACAGGTTTGCCGCCAGTAGCAATTAAAGCGTCTGAAATGTGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* *
6428003 TCAAATGGTGACAAAATCTTGTACACTTCAAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
** * *
6428068 AAATATGAGGATCACGTCTACCAAGTTTGGGG-CAAAACTCCTTACGAAAAAATTTCAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * * * *
6428132 CTGAACCGTAAAATGTTTCGAAAGTCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
196 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
** *
6428197 ACACGAAGGCTTAAGGGACCATTGCATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA-A-
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA--CATAG
* * * *
6428260 AAATATGAAGATGTCCCTAAACCCACCTACCACCCTATCAATCGACGGCTTGCGCATCCCGTCCC
324 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * * * *
6428325 TCTAGCCGACGCAGTGCCCGCCCTCCTGCCCGTACGCTCGTTTTGTCGGTTGGCTTAGGCATACG
389 TCTGGTCGGCGTAGTGCCCG--C-CC-G-CC---CGCTCGTTTCGTCGGTTGGCTTAGGCATACG
* * * * * * * *
6428390 GTGTTCATTCCCAGTCTAAGATTAGACCGGACCGAGGGTTGCGGTAGTAGGATTGGCAGCACGCA
446 GAGTTCATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGC-GCAGCAGGATCGGCAGCACGTA
* ** * * * * * * * *
6428455 GAAGGGGACCCGGCCAATCCTCAGCTTGCGTATCCCGCCCCTCTGGCCGGCTAAGTGCCCGTATG
510 GAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
*
6428520 CTCGTTTCGTGGGTTGACTTAGGCATACGTAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
575 CTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTC
* * * * *
6428585 CCAGTCTAAGATCAGACCGGACCGAGGGTTGCGGTAGCACATGCTGGGCTCGAGCATTTGCTGGT
640 CCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGT
* * * * * *
6428650 GTCGCATTTTTCTTCGTTGGGGCACCATCGTCGGAGCATAGCCAGAGAACCTGACCGACGGTATT
705 GCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATT
* ** *
6428715 AGGGTTTGGACGATCGGGAGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGGTAC
770 GGGGTTCCGACGATCGGG-GGG-CTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCT-GGTAC
* * *
6428780 TTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTTGAGAACGCACACCCCCTTAAAGA
832 TTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * **
6428842 GCATCTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAAATTTGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
6428907 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTGTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * * *
6428972 AAATACAAGGATCACGTCTACCAAGTTTGGGGACAAAACTCCTGCCAAAAAAATTTGAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * * * * *
6429037 CCAAAGCGCAAAAGGTTTCGAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCAATGAAACTTC
196 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * * * * *
6429102 ACGTGAAGGCTTAAAGGACCATCGTATGAAATTACATAAGCCCTAAAAATGGCTTTGGCAACACA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC--AAGCCATAAAAATGGCATTGGC-ACATA
* * *
6429167 GAAATCATGAAGATGT-ACT-AA-CCACCTACCACCCTATCGATCCACGACCTTGCGCATCCTGT
323 GAAAT-ATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG-GCTTGCGCATCCCG-
* *
6429229 TCTCTCTGCGGGCGGATGTAGTGCCCGCCACCGCCCGGCTTGCCCGCTAGTCGTTTCGTCGGTTG
385 TCTCTCT--GGTCGG-CGTAGT----G-C-CCG-CC--C--GCCCGC---TCGTTTCGTCGGTTG
* * * * *
6429294 GCTTAGGCATCACGGAGTTCCTTCTCAGTTCTAAAAATC-GAATCCAAACCAGATCAAGGGTTGC
433 GCTTAGGCAT-ACGGAGTTCATTCCCAG-TCT-AAGATCAG-A-CCGAA-C---T-GAGGGTTGC
* * * * *
6429358 GACAGCAGGAATCGGGCAGCACGCACCAGAGGGCGACGCCG-GCGATCGCCCGACTTTGCGTACT
488 G-CAGCAGG-ATC-GGCAGCACG---TAGAGGGGGAC-CCGATCGATC-CCCGGC-TTGCGCA-T
* * * * * *
6429422 CCC-ACCCTCTGGTCCGGCTGCGGCACCCGTACGCTCGTTTCGCTGGGTTGACTTTCGGCATACA
543 CCCGCCCCTCTGG-CCGGCTG-AGCGCCCGCACGCTCGTTTCG-TGGGTTGAC-TTAGGCATACG
* * * * *
6429486 GAGCTTCATCTCCCATTAC-AAACATACCGATTTCATTCCCCAGTCTGAAGATCGGTGACCGGAC
604 GAG-TTCAT-TCCCAGT-CTAAGCATACGGAGTTCATT-CCCAGTCT-AAGATC-G-GACCAGAC
* * ** * * * *
6429550 ACAAGGGTTGCGGCAGCACATACCAGGC-CAGGCAAGTACTGGTGCTGCATTTTTCTTCCGTGCG
662 -CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTT-CGT-CG
* * *
6429614 GGGCACCATCGTCGGTCGCATCGTCGGAGAACCTGACCGACGACATTGGGGTTCCGACGGTCGGG
724 GGGCACCATCGTCGG-AGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATC-GG
* * *
6429679 GGGGCCGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGAACTTGGCCCTTATTTTGGCCCC
787 GGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
*
6429744 CTATCCCTCATGAAACCTCGAGAACTCACACCCCCTTAAAGA
852 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * * * *
6429786 GCATTTGTGATTTTACAGGTTTGTTGCCAGTAGCAATTGAAGTGTCTGAAATGGGTACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
6429851 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTGAGCTGAATTTTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * *
6429916 AAATACAAGGATCATGTCTACCAAGTTTGGGACCAAAACTCCTTACGAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *
6429981 CCGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAAAAAATGAGTCGTCTTGCCATGAAACTTC
196 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
*
6430046 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCTTTGGCACATAGAA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
* * *
6430111 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTGCGTATCCCGTCTCTT
326 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
** * * **
6430176 TGGTCGATGTAGTGCCCGCCTGCCCGCCCGCTCATTTCGTCGGTTGGCTTAGGCATTCAAAGTTC
391 TGGTCGGCGTAGTG--C-CC-GCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTC
* * * *
6430241 ATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCAGGATCGGTAGCACATAGAGGGG
452 ATTCCCAGTCTAAGATCAGACCGAACTGAGGGTTGCG-CAGCAGGATCGGCAGCACGTAGAGGGG
* ** * * *
6430306 GACCCGACCGATCCTTGGCTTACGCATCCTGCCCCTCTGGCCGGCAGAGCGCCCGCACGCTCGTT
516 GACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTT
* * * *
6430371 TCGTGGGCTAACTTAGGCATACGGAGTTCATTCCTAGTCTAAGCATACGGAGTTCATTCCCATTC
581 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTC
** * * * *
6430436 TAAGATCAAACCAGACCAAGGGTTGCGGCAGCACATGCTGGGCTCGAGCATGTGTTGGTGCCGTA
646 TAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
* * * * *
6430501 TTTTTCTTC-TCCGGGGCACCATCG-CTTGAGCATCGTTTGAAGAAGCAGACCGACGGCATTGGG
711 TTTTTCTTCGT-CGGGGCACCATCGTC-GGAGCATCG-TCGGAGAACCTGACCGACGGCATTGGG
* * * *
6430564 GTTCCGGCGATCGAGGGAGCTGGGGGGCATGTGCGTACATGATGTGCGATGGGTGCTGGTACGTG
773 GTTCCGACGATCG-GGGGGCTGGGGGG--TGTGCGCACATGATGTGCGATGGGTGCTGGTACTTG
* * * *
6430629 GCCCTTATATTGGCCCCCTATCCCTCATCAAACATTGAGAATTCACACGCCCTTAAAGA
835 GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
6430688 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
*
6430753 TCAAATGGTCA-ACAAATCTTGTACACTTCGAGTTTTTACCTGAATTTTTTTGTGCATGCCAAAA
66 TCAAATGGTCACA-AAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * * * * *
6430817 AAAATACAAGTACCACGTCTACGAAGTTTGGGGCAAAAAATCCTTCCAAAAAAATTTTAAAAAAT
130 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
*
6430882 CCCAAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
195 CCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
6430947 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGA
260 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGA
** * *
6431012 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCTGGGCTTACGCATCCCGTTTCT
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * *
6431077 CTGGTCGGCGTGGTGCCCGCCCGCCCACTCATTTCATCAGTTGGCTTAGGCATACGGAGTTCATT
390 CTGGTCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATT
* * *
6431142 CCCAGTATAAGATCAGACC-AACTGAGGGTTGCAGCAGCAGGATCGGCAGCACGTAGTGTGGGAC
455 CCCAGTCTAAGATCAGACCGAACTGAGGGTTGC-GCAGCAGGATCGGCAGCACGTAGAGGGGGAC
* * *
6431206 CCGATTGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGTTGAGCGCCCGCACGCTCGTTTCA
519 CCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCG
*
6431271 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCTGTCTAA
584 TGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * * * *
6431336 GATCAGACTAGACCGAGGGTTACGATAGCACATGCTAGGCTCAGGCATGTGTTGGTGCCGTATTT
649 GATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTT
* * *
6431401 TTCTTCGTTGGGGCACCATCATCGGAGCATCGTCGGAGAACCTGACCGGCGGCATTGGGGTTCCG
714 TTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCC-
* * *
6431466 GA-GATTGGGGGGCTGGGGGGTGTGCGCACATGTTGTGCGGTGGGTGCTGGTACTTGGCCCTTAT
778 GACGATCGGGGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTAT
* * *
6431530 ATTGGACCCCTATTCCTCATCAAACCTCGAGAACTCACACCTCCTTAAAGA
843 ATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* * *
6431581 GCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCAATTAAAGTCTCTGAAATGGGGACAC-TTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * * *
6431645 TCAAATGGTCACAAAATCTTGTACATTTCGAGTTTTTAGCTGAATGTTTTTATGCATGCCAACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * *
6431710 AAATACAAGGATCACCTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAAAAATTTCAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * * *
6431775 CCAAAACCGCAAAAACTTTGAAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAAACTT
196 CC-GAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * ** *
6431840 CACGTGAAGGCTTAAGAGACCATTGTAT-AATTTACAAGCCAAAAAAATTTCATTGGCAC-TCAA
260 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACAT-AG
*
6431903 AAATATGAAGATGTGCCTAAACCCACCTACCACCC-AGTCCATCCACGGCTTGCGCATCCCGTCT
324 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTA-TCGATCCACGGCTTGCGCATCCCGTCT
* ** * ** * * * *
6431967 CTCTGGCCAACGTGGTGCCCGCTTGCCCGCTCGTTTCATTGGTTGGCTTTGGCATACGAAGTTCA
388 CTCTGGTCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCA
* * * * *
6432032 TTCCTAGTATAAGATCAGACCGGA-TCGAGGGTTGTGGTAGCAGGATCGGCAGCACGTAGAGGGG
453 TTCCCAGTCTAAGATCAGACCGAACT-GAGGGTTG-CGCAGCAGGATCGGCAGCACGTAGAGGGG
* * * *
6432096 GACCCGATCGATCCCCAGCTTACGCATCCC-CCCCTCTGGCCGGTTGAGCACCCGCACGCTCGTT
516 GACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTT
* * *
6432160 TTGTGGGTTGACCTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAATC
581 TCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTC
* * * * * *
6432225 TAAGATCGGATCAGATCAAGGGTTGCGACAGCACATGTTGGGCTCGGGCATGTGCTGGTGCCACA
646 TAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCA
* * * ** * ** * *
6432290 TTTTTCTTTGCCAGGGCACCATCCACGAAGCATCACCGGAGAACTTGACTGACGGCATTGGGGTT
711 TTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTT
* * * *
6432355 CC-AGTGACCGGGGGGGTCGGGGGGTGTGCGCACGTGATGTGCGATGGGTGCTGGTACTTGGCCC
776 CCGA-CGATCGGGGGGCT-GGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCC
* **
6432419 TTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCATCTTAAAGA
839 TTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
6432474 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * * * * * *
6432539 TCAAATGGTCACAAAATCTTGTACACTTCGACTTTTGAGCTAAATGTTTTTGTGCAAGGCAACAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
* * * *
6432604 AAATACAAGGATTACATCTACCAAGTTTGGGGCAAAAACTCCTTTCGAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
** * ** * * *
6432669 TTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAATGAGTCATCTTGCCATGAAACTTC
196 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
6432734 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
* * ** * *
6432799 ATATGAAGATGTGCCTAAACCCACCTACCACCTTATTGATCCGTGGCTTGCGCATCCTGTGTCTC
326 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* * **
6432864 TAGCCGGCGTAGTGCCTGTCCGCCCGCTCTCCCGCTCGTTTCGTTAGTTGGCTTAGGCATA--GA
391 TGGTCGGCGTAGTG-C---CCGCCCG----CCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGA
* * * * * *
6432927 GTTCATTCCCAGTCTAAGA-CTGGACCGAACTGAGGGTTGCGGTAGCATGATCGACAGCACGCAC
448 GTTCATTCCCAGTCTAAGATC-AGACCGAACTGAGGGTTGC-GCAGCAGGATCGGCAGCACGTAG
* * * * *
6432991 AGGGGGACCCGACCGATCCCCGGCTTGTGCATCCCGCGCCTCTGGCCGGCTGAGCACCCGCAAGC
511 AGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGC
* ** * * *
6433056 TCATTTCGTGGGTTGACTTAGGCATAAAGAGTTCATTCCTAGTCTAAGTAGACGGAGTTCATTCC
576 TCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCC
* * * * * *
6433121 CAGTCTAAGATTGGACCGGACCGAGGTTTGCGGCAGCACGTGCTGGGTTCGGGCATGTGCTCGTG
641 CAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTG
* *
6433186 CCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGAAGAACCTGACCGACGGCATTG
706 CCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTG
* * * * *
6433251 GGGTTCCGACGATCGGGGGGGCCAGGGGGGGTGTGCGCATATGATTTGCAATGGGTGGTGGTACT
771 GGGTTCCGACGATC-GGGGGG-C-TGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACT
* * *
6433316 TGGCCCTTATATTGGCCCCCTATCACTCATCAAATCTCGAGAACTCACACCCCCTTAAACA
833 TGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
*
6433377 GCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * * *
6433442 TCAAATGCTCACAAAATCTTGTACACTTCGAGTTTTTAGCCGAACTGTTTTGTGCATGCCAAAAA
66 TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
*
6433507 AAATACAAGGATTACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
131 AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
* * *
6433572 CCGAATCGTAAAATGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
196 CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
* * * ****
6433637 ACGTTAAGGCTTAAGGGACCATTGTGTGAATTTACAAGCCATAAAAATGGTATTGGCTTGCAGAA
261 ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
* *
6433702 ATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCACGGCTTGCGCAACCCGTCTCTC
326 ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
* * *
6433767 TAGTCGACGTAGTGCCCGCCCGCCTGCCCGCCCGTCCGCTCGTTTTGTCGGTTGGCTTAGGCATA
391 TGGTCGGCGTAGT----G--C-CC-GCCCG--C--CCGCTCGTTTCGTCGGTTGGCTTAGGCATA
* * * * * * ** *
6433832 CGGAGTCCATTCCTAGTCTAAGATCAGACCAAAC-AAGGGGTTGCG-ACCCAAGATCACCAGCAT
444 CGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTGA-GGGTTGCGCA-GCAGGATCGGCAGCAC
* * * *
6433895 GTAGAGGGGGACCCGATTGAGCCTCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCACCCGC
507 GTAGAGGGGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGC
* *
6433960 ACGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCAATCCCAGTCTAAGCATACGGAGTTCA
572 ACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCA
* * *
6434025 TTCCCAGTCTAAGATCGGACCAGACCGGGGGTTGCGACAGCACATGCTGCGCTCGGGCATGTGCT
637 TTCCCAGTCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCT
* * * * ** *
6434090 GGTGTCACATTTTTCTTCGTCGGGGCACCATCGCCGAAGCATCG-CTGGAGATTCTGACCGGCGG
702 GGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTC-GGAGAACCTGACCGACGG
** * * *
6434154 CATTGGGGTTCCGGTGATCGGGGGGGCCGGGGGGTGTGCGCACATGATGTGCGAAGAGTGCTGGT
766 CATTGGGGTTCCGACGATC-GGGGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGT
6434219 AC-TGTGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
830 ACTTG-GCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
* *
6434283 GCATTTGGGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTT
* * * *
6434348 TTCAAATGGTCACCAAATCTTGTACAC-TCTGAGTTTTTAGCTGAATTATTTTGTGGATGCCAAC
65 TTCAAATGGTCACAAAATCTTGTACACTTC-GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAA
* * * *
6434412 AAAAATACAAGGGTCATGTCTACCAAGTTTGGGGCCAAAAATTCTTCCGAAAAAATTTTAAAAAA
129 AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAA
** *
6434477 TCCCGAACCGCAAAAAGTTTTGAAAATCATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACT
194 TCCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACT
* * * * *
6434542 TCACGTGATGGCTTAAGGGACCATTGTATGAATATGCGAGCCATAAAAATGGCATTGGCACATAT
259 TCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAG
* * * *
6434607 AAATATGAATATGTGCCTAAACCCACCTACCACCTTATCAATCCACGGCTTGTGCATCCCGTCTC
324 AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTC
* * * * ** *
6434672 TTTGGTCAGCGTAGCGCCCGCCCGCCCGCTCGTTTCATCAATTAGCTTAGGCATACGGAGTTCAT
389 TCTGGTCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
* * * * * ** *
6434737 TCCCAGCCTAAGATCAGACC-AGACCGAGGGTTACGATAGCAAGATCGATAGCACGGAGAGGGGG
454 TCCCAGTCTAAGATCAGACCGA-ACTGAGGGTTGCG-CAGCAGGATCGGCAGCACGTAGAGGGGG
* * ** * * *
6434801 GCCTGATCGATCCTTGACTTGCGCATCCCGCCCCTCTGGCCGGCTGAGTGCTCGCACGCTCGTTT
517 ACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTT
* * * * **
6434866 TGTGGGTTGACTTAGGCGTACGGAGTTCATTCCCAGTCTAAGCAAACGGAGTTCATTCTCAACCT
582 CGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCT
* * * * *
6434931 AAGATCGGACCGGACCGAGGGTTGTGGAAGCATATGCTGGGCTCGAGCATGTGCTGGTGCCGCAT
647 AAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCAT
* *
6434996 TTTTCTTCG-CGGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGACATTAGGGTT
712 TTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTT
* * * *
6435060 CCGACGATCTGGGGGGCCGGGGGGTGTGCGCACATGATCTACAATGGGTGC-GGTACTTGGCCCT
776 CCGACGATC-GGGGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCT
* *
6435124 TATATTGGCCCCCTATCCCTCATCAAACCTCAAAAACTCACACCCCCTTAAAGA
840 TATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
*
6435178 GCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
* * *
6435243 TCAAATGGTCACAAAATCTTGTACAC-TCTGAGTTTTTAGCTGAATTTTTTTGTGGATACCAACA
66 TCAAATGGTCACAAAATCTTGTACACTTC-GAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * * * * * * *
6435307 AAAATACAAGGGTCCCATCTACCAAGTTTGGGGCTAAAAATTCTTTCAAAAAAATTTTAAAAAAT
130 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
*
6435372 CCCGAACCGCAAAAAGTTTTAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
195 CCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* * *
6435437 GACGTGAAGGCTTAAGGGACCATTGTATGAATATACAAGCCATAAAAATGGCATTGGCATATAGA
260 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGA
** *
6435502 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATTAATCCACGTCTTGCGCATCCCGTCTCT
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* * * * * **
6435567 CTGGCCGGCATAGCGCCCGCCCGCCCGCCCGCTCGTTTCATCAGTTGGCTTAGGCATATTGAGTT
390 CTGGTCGGCGTA--G--TGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTT
* * * * * *
6435632 CATTCCGAGCCTAAGATCGGACC-AGACTGAGGGTTACAGCAGCAAGATCGACAGCACGTAGAGG
451 CATTCCCAGTCTAAGATCAGACCGA-ACTGAGGGTTGC-GCAGCAGGATCGGCAGCACGTAGAGG
* * * * * * * *
6435696 GGGACCTGGTCGATCCGCGCCTTTCGCATCCAGCCCCTCT-GTCGACTGAGCGCCCGCACGCTCG
514 GGGACCCGATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCG
* * * * *
6435760 TTTTGTGGGTTGACTTAGGCATACAGAGTTCATTCCCGGTCGAAGCATACAGAGTTCATTCCCAG
579 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAG
* * ** * * * *
6435825 TCTAAGATTGGACCAGACCGAGGATTATGGTAGCACATGCTGGGCTCAGGCATGTGCTGGTGTCA
644 TCTAAGATCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCG
6435890 CATTTTTCTTCGTCGGGACACTATCACCGAGGCACCATCGTCGGAGCATCGTCGGAGAACCTGAC
709 CATTTTTCTTCGTC--G-----------G-GGCACCATCGTCGGAGCATCGTCGGAGAACCTGAC
* * * * *
6435955 CGACGGCATTGGGTTTCCGACGATCAGGGGGC-AGGGGGTTTTCGCACATGATGTGCGATGGGTG
760 CGACGGCATTGGGGTTCCGACGATCGGGGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* *
6436019 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCACACCCTCTTA
825 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
6436084 AAGA
890 AAGA
*
6436088 GGATTTG-GATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGT-TACTGAAATGGGGACACTTTT
1 GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT-CTGAAATGGGGACACTTTT
* * *
6436151 TTCAAATGGTCAC-AAATCTTGTACAGTTCGAGTTTTTAGCTGAATTTTTTTGTCCATGCC-AAC
65 TTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAA
* * * * *
6436214 AAAATTCAAGGATCACATCTACCAGGTTTGGGGCCAAAACTCTTTCTGAAAAAATTTTAAAAAAT
130 AAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAAT
* * * *
6436279 CCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAATGAGTCATCTTGCCATGAAACTT
195 CCCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTT
* **
6436344 CACGTGAAGGCTTAAGGGACCATAGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGA
260 CACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGA
* * * *
6436409 AATATGAAGATGTGCCAAAACCCACCTACCA-CCTATCAATACACGGCTTGCGCATCACGTCTCT
325 AATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCT
* ** *
6436473 CTGG-CTGGCATAGTGCCCGCCTACCCGCTTGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
390 CTGGTC-GGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCAT
6436537 TCCCAGTCTAAGATC
454 TCCCAGTCTAAGATC
6436552 GGATGTTGCG
Statistics
Matches: 8266, Mismatches: 1022, Indels: 418
0.85 0.11 0.04
Matches are distributed among these distances:
874 3 0.00
875 115 0.01
876 51 0.01
883 3 0.00
884 6 0.00
885 2 0.00
886 48 0.01
887 149 0.02
888 342 0.04
889 51 0.01
890 31 0.00
891 162 0.02
892 668 0.08
893 564 0.07
894 592 0.07
895 196 0.02
896 321 0.04
897 381 0.05
898 201 0.02
899 19 0.00
900 143 0.02
901 226 0.03
902 576 0.07
903 494 0.06
904 421 0.05
905 136 0.02
906 235 0.03
907 579 0.07
908 329 0.04
909 145 0.02
910 98 0.01
911 70 0.01
912 13 0.00
913 6 0.00
914 17 0.00
915 2 0.00
916 3 0.00
917 37 0.00
918 19 0.00
919 21 0.00
920 5 0.00
921 3 0.00
922 1 0.00
923 1 0.00
924 3 0.00
925 7 0.00
926 17 0.00
927 14 0.00
928 33 0.00
931 19 0.00
932 6 0.00
933 16 0.00
934 11 0.00
935 23 0.00
936 10 0.00
937 11 0.00
938 11 0.00
939 25 0.00
940 19 0.00
941 23 0.00
942 34 0.00
943 55 0.01
944 351 0.04
945 51 0.01
946 39 0.00
947 3 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (893 bp):
GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTT
TCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAAAAA
AAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATC
CCGAACCGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTC
ACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACATAGAA
ATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTC
TGGTCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTC
CCAGTCTAAGATCAGACCGAACTGAGGGTTGCGCAGCAGGATCGGCAGCACGTAGAGGGGGACCC
GATCGATCCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTG
GGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGA
TCGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTT
CTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAACCTGACCGACGGCATTGGGGTTCCGAC
GATCGGGGGGCTGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATT
GGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA
Found at i:6432212 original size:26 final size:26
Alignment explanation
Indices: 6432176--6432228 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6432166 GTTGACCTAG
*
6432176 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
6432202 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
6432228 G
1 G
6432229 ATCGGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:6434021 original size:26 final size:26
Alignment explanation
Indices: 6433985--6434037 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6433975 GTTGACTTAG
6433985 GCATACAGAGTTCAATCCCAGTCTAA
1 GCATACAGAGTTCAATCCCAGTCTAA
* *
6434011 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCAATCCCAGTCTAA
6434037 G
1 G
6434038 ATCGGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.26, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACAGAGTTCAATCCCAGTCTAA
Found at i:6438457 original size:712 final size:717
Alignment explanation
Indices: 6437418--6438802 Score: 2140
Period size: 712 Copynumber: 1.9 Consensus size: 717
6437408 CCCTATTGAA
* * ** * * *
6437418 GCATGCGGAGTTCATTCCCACTCTAAGATTGGACCAGACCCAGGGTTGTGGTAGCACTTGCTGGG
1 GCATACGGAGTTCATTCCCACTCTAAGATCGGACCAGACCCAGGGTTACGGCAGCACATGCTAGG
*
6437483 CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGTCAGAGCATCACCGGAGA
66 CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGCCAGAGCATCACCGGAGA
* ** * *
6437548 ACCTAACCGGCGGCATTGGGGTTCCGATAATCGGGGGGGCCGGGGGGGCGTGTGTGCACATGATG
131 ACCTAACCGGCGGCATTGGGGTTCCGACAATCGAAGGGGCCGGGGGCGCGTGTGCGCACATGATG
* * *
6437613 TGCGATGGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
196 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTCGAGAACCC
* * *
6437678 ACATCCCCTTAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCGATTAAAGTGTCTGAA
261 ACACCCCCATAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
6437743 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
326 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTT
6437808 TTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
391 TTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
*
6437873 AAATTTTAAAACATCCCGAACCACAAAAAGTTTCCAAAATTGTGAAAAATAAAAAACGAGTCGTC
456 AAATTTTAAAACATCCCGAACCACAAAAAGTTTCCAAAATGGTGAAAAATAAAAAACGAGTCGTC
*
6437938 TTGCCATGAAACTTCACGTGAA-GGC-TTAAGGGACCATTGTATGAATTTACAGGCCATAAAAAT
521 TTGCCATGAAACTTCACGTGAACGGCTTTAAGGGACCATTGTATGAATTTACAAGCC-TAAAAAT
* * *
6438001 GGCATTGGCATGCAGAA-ATA-T-AAAG-ATGTGCCTCAACCAACTTACCA-CCTTATCGATCCA
585 GG--TTGGCACGCAGAATATATTGAAAGAATGTGCCTAAACCAACCTACCACCCTTATCGATCCA
*
6438061 CGGC-CTGCGCATCCCATCTCTCTGGCTGGCATAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTG
648 C-GCTCTGCACATCCCATCTCTCTGGCTGGCATAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTG
6438125 GCTTAG
712 GCTTAG
* * * * *
6438131 GCATACGGAGTTCATTCCCAGTTTAAGATCGGACCGGATCGAGGGTTACGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCACTCTAAGATCGGACCAGACCCAGGGTTACGGCAGCACATGCTAGG
* * * **
6438196 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCGGAGCATCGGCGGAGA
66 CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGCCAGAGCATCACCGGAGA
* * * * * *
6438261 ACCTGACTGGTGGCATTGGGGTTCCTACGATCGAAGGGGTCGGGGGCG-GTGTGCGCACATGATG
131 ACCTAACCGGCGGCATTGGGGTTCCGACAATCGAAGGGGCCGGGGGCGCGTGTGCGCACATGATG
*
6438325 TGCTATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTCGAGAACCC
196 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTCGAGAACCC
* *
6438390 GCACCCCCATAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
261 ACACCCCCATAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
6438455 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTT
326 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTT
* *
6438520 TTTGCATGCCAAGAAAAATACAAGGATCACGTCTACCAAGTTTGGGTCCAAAACTCCTTCCGAAA
391 TTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * * * *
6438585 AAATTTTAAAATATCTCGAACCATAAAAAGTTTCGAAAATGGTGAAAAATAGAGAACGAGTCTTC
456 AAATTTTAAAACATCCCGAACCACAAAAAGTTTCCAAAATGGTGAAAAATAAAAAACGAGTCGTC
6438650 TTGCCATGAAACTTCACGTGAACGGGCTTTAAGGGACCATTGTATGAATTTACAAGCCTAAAAAT
521 TTGCCATGAAACTTCACGTGAAC-GGCTTTAAGGGACCATTGTATGAATTTACAAGCCTAAAAAT
* *
6438715 GGTTGGCACGCAGAATATATTGCAAGAATGTGCCTAAACCCACCTACCACCCTTATCGATCCACG
585 GGTTGGCACGCAGAATATATTGAAAGAATGTGCCTAAACCAACCTACCACCCTTATCGATCCACG
* *
6438780 CTTTGCACATCCCGTCTCTCTGG
650 CTCTGCACATCCCATCTCTCTGG
6438803 GTCCGGTCGT
Statistics
Matches: 605, Mismatches: 58, Indels: 14
0.89 0.09 0.02
Matches are distributed among these distances:
712 354 0.59
713 153 0.25
714 13 0.02
715 32 0.05
716 21 0.03
717 32 0.05
ACGTcount: A:0.26, C:0.24, G:0.23, T:0.26
Consensus pattern (717 bp):
GCATACGGAGTTCATTCCCACTCTAAGATCGGACCAGACCCAGGGTTACGGCAGCACATGCTAGG
CTCGAGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCGCCAGAGCATCACCGGAGA
ACCTAACCGGCGGCATTGGGGTTCCGACAATCGAAGGGGCCGGGGGCGCGTGTGCGCACATGATG
TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCAATCCCTCATCAAACCTCGAGAACCC
ACACCCCCATAAAGAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACATCGAGTTTTTAGCTGAATTTTTT
TTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
AAATTTTAAAACATCCCGAACCACAAAAAGTTTCCAAAATGGTGAAAAATAAAAAACGAGTCGTC
TTGCCATGAAACTTCACGTGAACGGCTTTAAGGGACCATTGTATGAATTTACAAGCCTAAAAATG
GTTGGCACGCAGAATATATTGAAAGAATGTGCCTAAACCAACCTACCACCCTTATCGATCCACGC
TCTGCACATCCCATCTCTCTGGCTGGCATAGTGCCCGCCCGCCCGCTCATTTCGTCGGTTGGCTT
AG
Found at i:6440647 original size:26 final size:26
Alignment explanation
Indices: 6440617--6440669 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6440607 ATTGACTTAG
6440617 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6440643 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6440669 G
1 G
6440670 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6441207 original size:26 final size:26
Alignment explanation
Indices: 6441177--6441226 Score: 91
Period size: 26 Copynumber: 1.9 Consensus size: 26
6441167 GACTTAGGCG
6441177 TACGGAGTTCATTCCCAGTCTAAGCA
1 TACGGAGTTCATTCCCAGTCTAAGCA
*
6441203 TACGGAGTTCATTCCTAGTCTAAG
1 TACGGAGTTCATTCCCAGTCTAAG
6441227 ATCAGACCAG
Statistics
Matches: 23, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.24, G:0.20, T:0.30
Consensus pattern (26 bp):
TACGGAGTTCATTCCCAGTCTAAGCA
Found at i:6442837 original size:901 final size:899
Alignment explanation
Indices: 6441005--6448171 Score: 8604
Period size: 901 Copynumber: 8.0 Consensus size: 899
6440995 TCTTTCATCA
* * * * * *
6441005 GTTGGCTTAGGCATATGGAGTTCATTCCTAGTCTAAGAT-TGAATCAGACAGAGGGTTCCAGCAG
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAG-CTGAGGGTTGCAGCAG
* * * * * * *
6441069 CAGGATCAGTAGCACACATAGGGGGACCTGGCCGATCCCCAGCTTGCGCATCCCACCCCTCTGGC
64 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGC
* * * *
6441134 CGGCTGAGCGCCCGTACACTCGTTTCATGGGTTGACTTAGGCGTACGGAGTTCATTCCCAGTCTA
129 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * * *
6441199 AGCATACGGAGTTCATTCCTAGTCTAAGATCAGACCAGATCGAGGGTTACGGCACCACATCCTGG
194 AGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGG
* * **
6441264 GCTCGAGCATGTGCTGGTGCCAAATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCG-TCAAA
259 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGA
* *
6441328 GAACCTGACCGGTGGCATTGGGGTTCCGACGATCGGGGGGGCCGAGGGGTGTGCGCACATGATGT
324 GAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCG-GGGGGGTGCGCACATGATGT
* * *
6441393 GCAATGGGTGCTGGTACTTGGCCCTTATATTAGCCCCCTATCCCTCATCAAACCTCGAGAACTCT
387 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* *
6441458 CACCCCCTTAAAGAGCGTTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTCTGAAA
452 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
6441523 TGGGGACACTTTTTTTAATTGGTCACAAAATCTTGGACACTTCGAGTTTTTAGCTGAATTTTTTT
517 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * ** * * * *
6441588 GTGCATGCCAACAAAAATACAAGGATCATGTCAATGAAGTTTGGGGCTAAAACGCGTACCGAAAA
582 GTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
** * * * * *
6441653 AATTTTAAAAAATCATGAACTGCAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCATCT
646 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
*
6441718 TGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
711 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * *
6441783 ATTGGCATGTAGAAATATAAAGATGTGCCTAAACCCACCTAACACCCTATCGATCCACGGCCTGC
776 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
6441848 GCATCCCGTCTCTCTGGTCGGCATAGTGCCCGCCCCTCCGCCCGCCCGCTCGTTTCGTCG
841 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCC-CCGCCCGCCCGCTCGTTTCGTCG
* ** * *
6441908 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGCTGAGGCTTGTGGTAGTA
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGCTGAGGGTTGCAGCAGCA
* * ** *
6441973 GGATTGGCAGCACGCAGAAGGGGACCTAACCGATCCCCGGCTTGTGCATCCCACCCCTCTGGCCG
66 GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCG
* * * * **
6442038 GTTGAGCGCCCGCACGTTCGTTTCGTGGGTTCACTTAGGTATACAAAGTTCATTCCCAGTC-AAG
131 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
* * * *
6442102 CATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCGACAGCACATGCTAGGC
196 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * ** * * *
6442167 TCAGGCATGTGTTGGTGCCGTATTTTTCTTCGCCTGGGCACCATCGTCAGAGCATCGCT-GGAGA
261 TCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGAGA
* ** * * * *
6442231 ACCTGACCGACGGTTTTGGGGTTCTGGCGATCGGGTGGCCTGGGGGGGCATGCACACATGATGTG
326 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCC-GGGGGGG--TGCGCACATGATGTG
* * * *
6442296 CGATGGGTGCTAGTACTTGGCCCTTATATTGGCCCCATATCCTTCATCAAACCTAGAGAACTCAC
388 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
6442361 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAACCATTAAAATGTCTGAAAT
453 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* **
6442426 GGGGACACTTTTTTCAAATGGTCAAAAAATCTTGTACAGGTCGAGTTTTTAGCTGAATTTTTTTG
518 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
6442491 TGCATGCCAAAAAAATACAAGGATCACATCTACCAAGTCTAGGGCCAAAACTCCTTCCTAAAAAA
583 TGCATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * *
6442556 TTTTGAAAAATCCCAAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAAAAAATGAGTCGTCTTG
648 TTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
*
6442621 CCTTGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
713 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
6442686 TGGCACGCAGAAATATGATGGTGTGCCTAAAACCACCTACCACCCTATCGATCCACAGCTTGCGC
778 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * * *
6442751 ATCTCGTCTCTCTGGCCGGCGTAGTGCCCGCCCACCCGTCTGCCCACTCTTTTCGTCA
843 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCC-CCCGCCCGCCCGCTCGTTTCGTCG
* * * * *
6442809 GTTGGCTTAGGCATACGGAGTCCATTCCCAGTCTAAGAT-GGACCAAACTGAGGGTTGCGGTAGC
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-AGCTGAGGGTTGCAGCAG-
** * * * ** * * * *
6442873 CA-GATCGATAGCATGTAGAGAGGGACCCGGTCGATACCCGGCTTGCGTATCCCGCCCTTCTGGC
64 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGC
* * * * *
6442937 CGGTTGAGCGCTCGTACGCTCGTTCCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTATA
129 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * *
6443002 AGCATACCGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCACATGCTGG
194 AGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGG
6443067 GCTCGGGCATGTGCTGGTGCCACATTTTTC-TCGTCGGGGCACCATCGTCGGAGCATCG-TCGGA
259 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGA
** * ** *
6443130 GAACCTGACCGGCGGCATTGGGGTTCTTACGATC---AGG--GGGGTTGTGCGCACATTATGTGC
324 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGCGCACATGATGTGC
* * * *
6443190 GATGGGTGCTGGTACTTGGCTCTTATATTGGCCCCTTATCCCTCATCAAACCTCAAGAACTGACA
389 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
*
6443255 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGATATG
454 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
6443320 GGGACACTTATTTCAAATGATCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTTTTAT
519 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * *
6443385 GCATGCCAAAAAAATACAAGGATCATG-CTTGCAAAGTTTGGGGCCAAAACTCCTTTCGAAAAAA
584 GCATGCCAAAAAAATACAAGGATCACGTC-TACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * * *
6443449 TTTTAAAAAATCCCGAACCGTAAAAAGTTTTGAAAATCATGAAAAATTGAAAACGAGTAGTCTTG
648 TTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
* *
6443514 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTATATGAATTTCCAAGCCATAAAAATGGCAT
713 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
6443579 TGGCACGCAAAAATATGAAGATATGCCTAAACCCACCTACCACCCTATGGATCGACGGCTTGCGC
778 TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * * * ** *
6443644 ATCCCGTCTTTCTGGCCGGCCTAGT-----------GCCCGCTCGCTCATTTTATCA
843 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCCCCGCCCGCCCGCTCGTTTCGTCG
* * **
6443690 GTTGGCTTAGGCATACGGAGTTCATTCTCAGTCTAAGATAAGACCAGACCAAGGGTTGCAGCAGC
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-CTGAGGGTTGCAGCAGC
** * * * * * *
6443755 AATATCAGCAGAACGCAGAGGGGGACCTGGCCGATCCCCGGCTTGCGCATCCCTCTCCTCTGGCC
65 AGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCC
*** *
6443820 AATTGAGCGCCCTGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
130 GGCTGAGCGCCC-GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * * *** *
6443885 AGCATACGAAGTTCATTCCGAGTCTAAGATCGGATTGGACCGAGGGTT-CTGGCAGTACATGCTG
194 AGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGC-GGCAGCACATGCTG
6443949 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGG---CA----C----CATCG-TCGG
258 GGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGG
* * * * * * * *
6444002 AGAACTTGACCGACGGCATTGGGGTTCTGGCGACCGGGGGGGTCGTGGGGCTGTGTGCACATGAT
323 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCCG-GGGG-GGTGCGCACATGAT
* *
6444067 GTGTGATGGGTGCTGGTACTTGGGCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
385 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
6444132 CACACCCTCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAGTAGCCATTAAAGTGTTTGA
450 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* *
6444197 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTGTT
515 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* *
6444262 TTGTGCGTGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
580 TTGTGCATGCC-AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * *
6444327 AAAATTTAAAAAAATCCCGAACCGTAAAATGTTTCAAAAATTGTGAAAAATAGAAAACGAGTCGT
644 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
6444392 CTTGCCACGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
709 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
6444457 GCATTGGCACGCAGAAATATGAAGAAGTGCCTAAACCCACCTAGCACCCTATCGATCCATGACTT
774 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * * *
6444522 GCGCATCCTGTCTCTCTGGCCGGCGTAGTGCCCGCCTGCCGGCCCGCCCCCTCATTTTGTCG
839 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCC-CCCCGCCCGCCCGCTCGTTTCGTCG
* * * * * * *
6444584 GTTGGCTTAGGCAT-CAGAGTTCATTCTCGGTCTAAGATCAGACCGGATCGAGGGTTAC-GATAG
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGCT-GAGGGTTGCAG-CAG
* * * * ** * *
6444647 CAGGATCGACATCACGCAGAGGGGGACCGGGCCGATCGTCGGCTTGCACATCGCACCCCTCTGGC
64 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGC
* * *
6444712 CGACTGAGCGCCCGCATGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTA
129 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* ** *
6444777 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGATTGAGGGTTGCGGTAGCACATGCTGG
194 AGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGG
* ** *
6444842 GCTCGGGCATGTGCTGGAGCCACATTTTTCTTTATCGGGGCACCATCGTCGGAGCATC-ATCGGA
259 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGA
* * * * *
6444906 GAACCTTATCGGTGGCATTGGGGTTCCGACGATCGGGGTGGTCGGGGGGGGTGTACGCACATAAT
324 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGG-GG-CCGGGGGGGTG--CGCACATGAT
* *
6444971 GTGCGATAGATGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
385 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
*
6445036 CACACCCCCTTAAAGTGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
450 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * *
6445101 AATGAGGACGCTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTTTT
515 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * ** * **
6445166 TTGTGCATGCCAAAAAAATTGCAAGGATCAGGTGAACCAAGTTTGGCGTAAAAACTCC-TCC---
580 TTGTGCATGCCAAAAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * *
6445227 --------------T---GAACCGTAAAACGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGT
644 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGT
*
6445275 CTT-CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCTATAAAAATG
709 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * *
6445339 GCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCTACCTACCACCCTATCGATCCACGGCTT
774 GCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
6445404 GCGCATCCCATCTCTCTCGTCGGCGTAGT----G---CCCGCCCGCCCGCTCGTTTCGTCG
839 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCCCCGCCCGCCCGCTCGTTTCGTCG
* * * *
6445458 GTTGG-TTAGGCATACGGAGTTCATTCCTAGTCTAAGATCAGATCAGACCGAGGGTTGAAGCAGC
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-CTGAGGGTTGCAGCAGC
* * * ** * * *
6445522 AGGATCGACAACACACAGAGGGGGACCCGATTGATCCCCGGCTTGCGCATCCCGCCCCTTTGGGC
65 AGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCC
* * * *
6445587 GGCTGAGTGCCCGCATGCTCGTTTTGTGGATTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
130 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
6445652 GCATACGGAGTTCATTCCCTGTCTAAGATCAGA-CTGAACCGAGGGTTGCGGCAGCAGAAGCTGG
195 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCGAGGGTTGCGGCAGCACATGCTGG
* *
6445716 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTTGTCGGGGCACCATCATCGGAGCATCGC-CGGA
259 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGA
* * *
6445780 GAACCTGACCGGCGACATTGGGGTTCCGACGATCGAGGGGTC-GGGGGGTGCGCACACATGATGT
324 GAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGCG--CACATGATGT
* * *
6445844 GCGATGGGTGCCGATACTTGGCCCTTATATTGGCCCCCTATCCATCATCAAACCTCGAGAACTCA
387 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * *
6445909 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGTCAATAGGCATTAAAGTATCTGAAA
452 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
6445974 TGGGGACACTTTTTT-AAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
517 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * ** *
6446038 -TGTATGCCAACAAAAATACAAGGATCATGTCTACCAAGTTTGGTTCCAAAACTCCTTCCAAAAA
582 GTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* *** * *
6446102 AAATTTAAAAAATCCCGAACAAAAAAAAGTTTTGAAAACCGTGAAAAATAGAAAACGAGTCGTCT
646 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* * *
6446167 TGCCATGAAACTTCATGTGAAGGCTTAAGCGACCATTGTATGAATTTACAAGTCATAAAAATGGC
711 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * * * *
6446232 ATTGGCATGCAGAAATATGAAGATGTGCCTAGACCCACCTACCACCCTAGCGATCCATGACTTGC
776 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
6446297 GCATCCCGTCTCTCTAGTCGGTGTAGTGCCCGCCCGCCCGCCCGCCCGCTAGCCCGCCCGCCCGC
841 GCATCCCGTCTCTCTGGCCGGCGTAGT------------GCCCG-CC-C---CCCGCCCGCCCGC
*
6446362 TCGTTTCTTCG
889 TCGTTTCGTCG
* *
6446373 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCAGCAGT
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-CTGAGGGTTGCAGCAGC
* * * * * *
6446438 AGGATC-GAAGCACGCAGAGGGGGACCCGATCGATCCTCAGCTTGGGCATCCCGCCCCTCTGGCC
65 AGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCC
* * * *** *
6446502 GGCTGAGCGCCTGCACGCTCATTTCATGGGTTGACTTAGGTGCACAGAGTTCATTCCCAGTCTAA
130 GGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** * * * *
6446567 GCATATGGAGTTCATTCCCAATCTAAGATCAGACCAAACTAAGGCTTGCTGCAGCACATGTTAGG
195 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
6446632 CTCGGGCATGTGCTGGTACCGCATTTTT-TTCGTCGGGGCACCGTCGCCGGAGCATC-CTCGGAG
260 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGAG
** * *
6446695 AAACCTGACCGGCGGCATT-GGGTTCCGGTGATCGGTGGGGCCAGCGGGGTGTGCGCACCTGATG
325 -AACCTGACCGGCGGCATTGGGGTTCCGACGATCGG-GGGGCC-G-GGGGGGTGCGCACATGATG
* * *
6446759 TGCGATGGGTGCTGGCACTTGG--C-T-TATTGGCCCCAT-TCCCTCATC-AATCTCGAGAACTC
386 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * * *
6446818 ACAGCCCCTTAAACAGCATTTGAGATTTTACAGGTGTGCTGGGCAGTAGCCATTAAAGTGTCTGA
451 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCT-GCCAGTAGCCATTAAAGTGTCTGA
*
6446883 AATGGGGACAC-TTTTTC-AATGGTCAC--AATCTTGTACACGTTCGA-TTTTAAGCTGCAATTT
515 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAC-TTCGAGTTTTTAGCTG-AATTT
* * **
6446943 TTTTGTGCATGCCACAAAAGATAACGAGGATCCACGGTCTACC-AGTTTGGGGGTAAAAACTCCT
578 TTTTGTGCATGCCA-AAAAAAT-ACAAGGAT-CAC-GTCTACCAAGTTT-GGGGCCAAAACTCCT
* * * * *
6447007 TCCG-AAAAAGTTTAAAAAATTCCGAACCGTAAGAAGTTTTGACAATCGTGAAAAATAGAAAAAC
638 TCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAG-AAAAC
*
6447071 GAGTCGTCTTGCAATGAAACTTCACGTTG-AGGCTTAAGGGACCCA-TGTATGAA-TTACAAAGC
702 GAGTCGTCTTGCCATGAAACTTCACG-TGAAGGCTTAAGGGA-CCATTGTATGAATTTAC-AAGC
* *
6447133 CATAAAAATGGCATTGGCACGTAGAAAATATGAAGATGTGCCTAAACCCACCGACCACCCTATCG
764 CATAAAAATGGCATTGGCACGCAG-AAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCG
* * * *
6447198 ATCCACAGCTTGCGCATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCTGCCCGCCCGCCGCCCGT
828 ATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCC--CCC-CGC-CCGCCCGC
*
6447263 TCATTTCGTCG
889 TCGTTTCGTCG
* * * *
6447274 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGAACTAAGTGTTGCTGCAGC
1 GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACC-AGCTGAGGGTTGCAGCAG-
* ** * *
6447339 CA-GATCGGTAGCACATAGAAGGGGACCCGACCGATCACCGGCTTGCGCATCCCACCCCTCTGGC
64 CAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGC
* *
6447403 CGGCTGAGAGCCTGCACGCTCGTTTCGT-GG--G--TT-----T----A---C-TT---AG----
129 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
* * ** *
6447443 -GCATACGGAGTTCATTGCCAGTCTAAGATCAGACCAGACCGATGGTTATGGCAGCACATGCTGC
194 AGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGG
* * ** * * *
6447507 TCTCGGGCATGTACTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGCCAGAGCATCAC-CGGA
259 GCTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGA
* *
6447571 GAACCTGACCGGTGGTATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATG
324 GAACCTGACCGGCGGCATTGGGGTTCCGACGATC-GGGGGGCC-GGGGGG-GTGCGCACATGATG
* * *
6447636 TGCAATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTCGAGAACTC
386 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
* * * *
6447701 ACAGCCCCTTAAAGAGCATCTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTCAA
451 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
* * *
6447766 ATGGGGACACTTTTTTCAAATGGTCACAAAATCCTGTACACTACGAGTTTTTAGCTGAATTGTTT
516 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * *
6447831 TATGCATGCGAATAAAAATACAAGGATCACATCTACCAAGTTTGGGGCC-AAACTCCTTCCGAAA
581 TGTGCATGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* ** *
6447895 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTGCAAAAATCGTGAAAAATAGAAAATGAGTCGTC
645 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* *
6447960 TTGCCATGAAACTTGACGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGG
710 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
6448025 CATCGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCGACGGCTTG
775 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * *
6448090 CGCATCCCGTCTCTCTGGCTGACGTAAT----G---CCCGCCCGCCTGCTCATTTCGTCG
840 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCCCCGCCCGCCCGCTCGTTTCGTCG
* *
6448143 GTTGACTTAGGCATACAGAGTTCATTCCC
1 GTTGGCTTAGGCATACGGAGTTCATTCCC
6448172 TGTCCAAGCA
Statistics
Matches: 5400, Mismatches: 700, Indels: 362
0.84 0.11 0.06
Matches are distributed among these distances:
869 86 0.02
870 58 0.01
871 152 0.03
873 51 0.01
874 318 0.06
875 1 0.00
876 96 0.02
877 87 0.02
878 4 0.00
879 2 0.00
880 81 0.01
881 359 0.07
882 565 0.10
883 243 0.05
884 28 0.01
885 26 0.00
886 21 0.00
887 1 0.00
888 1 0.00
890 44 0.01
891 142 0.03
892 140 0.03
893 545 0.10
894 31 0.01
895 7 0.00
897 2 0.00
898 2 0.00
899 4 0.00
900 19 0.00
901 693 0.13
902 495 0.09
903 92 0.02
904 236 0.04
907 1 0.00
908 21 0.00
909 14 0.00
910 77 0.01
911 47 0.01
912 68 0.01
913 96 0.02
914 118 0.02
915 228 0.04
916 89 0.02
918 9 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.25
Consensus pattern (899 bp):
GTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGCTGAGGGTTGCAGCAGCA
GGATCGGCAGCACGCAGAGGGGGACCCGACCGATCCCCGGCTTGCGCATCCCACCCCTCTGGCCG
GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAG
CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCGAGGGTTGCGGCAGCACATGCTGGGC
TCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGCTCGGAGA
ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCGGGGGGGTGCGCACATGATGTGCGA
TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACC
CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGC
ATGCCAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTT
TAAAAAATCCCGAACCGTAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCA
TGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGG
CACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATC
CCGTCTCTCTGGCCGGCGTAGTGCCCGCCCCCCGCCCGCCCGCTCGTTTCGTCG
Found at i:6443006 original size:26 final size:26
Alignment explanation
Indices: 6442977--6443029 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6442967 GTTGACTTAG
*
6442977 GCATACGGAGTTCATTCCCAGTATAA
1 GCATACCGAGTTCATTCCCAGTATAA
*
6443003 GCATACCGAGTTCATTCCCAGTCTAA
1 GCATACCGAGTTCATTCCCAGTATAA
6443029 G
1 G
6443030 ATCAGACCGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACCGAGTTCATTCCCAGTATAA
Found at i:6443890 original size:26 final size:26
Alignment explanation
Indices: 6443860--6443912 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6443850 GTTGACTTAG
*
6443860 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
*
6443886 GCATACGAAGTTCATTCCGAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6443912 G
1 G
6443913 ATCGGATTGG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:6444778 original size:26 final size:26
Alignment explanation
Indices: 6444749--6444802 Score: 99
Period size: 26 Copynumber: 2.1 Consensus size: 26
6444739 TGGGTTGACT
6444749 TAGGCATACAGAGTTCATTCCCAGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
*
6444775 TAGGCATACGGAGTTCATTCCCAGTC
1 TAGGCATACAGAGTTCATTCCCAGTC
6444801 TA
1 TA
6444803 AGATCAGACC
Statistics
Matches: 27, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.20, T:0.28
Consensus pattern (26 bp):
TAGGCATACAGAGTTCATTCCCAGTC
Found at i:6445655 original size:26 final size:26
Alignment explanation
Indices: 6445626--6445678 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6445616 ATTGACTTAG
6445626 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6445652 GCATACGGAGTTCATTCCCTGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6445678 G
1 G
6445679 ATCAGACTGA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6446333 original size:4 final size:4
Alignment explanation
Indices: 6446324--6446361 Score: 58
Period size: 4 Copynumber: 9.5 Consensus size: 4
6446314 TCGGTGTAGT
**
6446324 GCCC GCCC GCCC GCCC GCCC GCTA GCCC GCCC GCCC GC
1 GCCC GCCC GCCC GCCC GCCC GCCC GCCC GCCC GCCC GC
6446362 TCGTTTCTTC
Statistics
Matches: 30, Mismatches: 4, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
4 30 1.00
ACGTcount: A:0.03, C:0.68, G:0.26, T:0.03
Consensus pattern (4 bp):
GCCC
Found at i:6449064 original size:26 final size:26
Alignment explanation
Indices: 6449035--6449087 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
6449025 GTTGACTTAG
6449035 GCATAC-AGAGTTCATTCCCAGTCTAA
1 GCATACGA-AGTTCATTCCCAGTCTAA
6449061 GCATACGAAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAGTCTAA
6449087 G
1 G
6449088 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.30, C:0.26, G:0.17, T:0.26
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAGTCTAA
Found at i:6451523 original size:26 final size:26
Alignment explanation
Indices: 6451487--6451539 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
6451477 GTTGACTTAG
* *
6451487 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCAAGTATAA
6451513 GCATACGGAGTTCATTCCAAGTATAA
1 GCATACGGAGTTCATTCCAAGTATAA
6451539 G
1 G
6451540 ATCGGACCGA
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.23, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCAAGTATAA
Found at i:6453263 original size:26 final size:26
Alignment explanation
Indices: 6453233--6453289 Score: 87
Period size: 26 Copynumber: 2.2 Consensus size: 26
6453223 GTGGGTTGAC
* * *
6453233 CTAAGCATACGGAGTTCTTTCCCAGT
1 CTAAGCATACAGAGTTCATTCCCAGA
6453259 CTAAGCATACAGAGTTCATTCCCAGA
1 CTAAGCATACAGAGTTCATTCCCAGA
6453285 CTAAG
1 CTAAG
6453290 GTCAGACCAG
Statistics
Matches: 28, Mismatches: 3, Indels: 0
0.90 0.10 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.30, C:0.26, G:0.18, T:0.26
Consensus pattern (26 bp):
CTAAGCATACAGAGTTCATTCCCAGA
Found at i:6454586 original size:884 final size:885
Alignment explanation
Indices: 6452368--6471590 Score: 17619
Period size: 895 Copynumber: 21.5 Consensus size: 885
6452358 GTTGATTTAG
* * * * * **
6452368 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGATCAAGGGTTACAACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * **
6452433 CTCGGGCATGTGCCGGTGCTGCATTTTTCTTCGTCGGGGCACCATCGCCAAAGCATCG-CTGGAG
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTC-GGAG
* *
6452497 AACCTGACCAGCGGCATTGGGGTTCCGACGGTCAGGGGGGCTGGGGGGTGTGCGCACATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTCCGACGATC------G--GGGGGGTGTGCGCACATGATGTG
* *
6452562 CGATGGGTGCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTCAC
186 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
6452627 AGCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTGAAAT
251 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * *
6452692 GGGGAAACTTTTTTCAAATGGTCACAAAATCTTGTACACTCCGAGTTTTTAGCTGAATTGTTTTG
316 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * ** *
6452757 AGCATGCCAATAAAAATACAAGGATCATGTCTACCAAGTTTGGGGTGAAAACTCCTTCCAAAAAA
381 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * *
6452822 ATTTTAAAAAATCCCGAACCGTAAAATGTTTCAAAAATCGA-GAAAAATAAAAAATGAGTCGTCT
446 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATC-ATGAAAAATAGAAAACGAGTCGTCT
* * *
6452886 TGCCAGGAAACTTGACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCCTAAAAATGGC
510 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
** *
6452951 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCGACGGCTTGC
575 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
6453016 GCATCCCGTCTCTCTGACCGACGTAGTGCCCACCCGCCTGCTCATTTCGTCGGTTGGCTTAGGCA
640 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGG-TGGCTTAGGCA
* * * *
6453081 TACGGAGTTCATTCCCAGTCTAAGATCGGACCGGACCAAGGGTTGCGATAGCAGGATC-AGTAGC
704 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGA-CAGC
* ** * * * ** * *
6453145 ACGTAGAGGGGGACCCGATCGATCCTCGACTTACGCATCCCACCCCTCTGGCCGACTGAGCGCCT
768 ACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCC
** * * *
6453210 ATACGCTCGTTTCGTGGGTTGACCTAAGCATACGGAGTTCTTTCCCAGTCTAA
833 GCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
6453263 GCATACAGAGTTCATTCCCAGACTAAGGTCAGACCAGATCGAGGGTTGCAGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * ** * **
6453328 CTCGTGCATGTGCTGGTGTCACATTTTTCTTCACCGGGGCACCATCATCGGAGCATCACCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * **
6453393 ACCTGACCGGCGGCATTGGGGTTTCGGTGATCGAGGGGCCGGGGGGGTGTGCGCACATGATGTAT
130 ACCTGACCGGCGGCATTGGGG-TTC--CGA-CGA----TCGGGGGGGTGTGCGCACATGATGTGC
* * *
6453458 GATGGGTTCTGGCACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACA
187 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * * *
6453523 GCCTCTTAAAGAGTATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
252 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * * *
6453588 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTTTAGCTGAATTGTTCTAT
317 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * **
6453653 GCATGGCAATAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCCCCCGAAAAAA
382 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* *
6453718 TTTTAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCAT-AAAACATAGAAAACGAGTCGTCTT
447 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAA-ATAGAAAACGAGTCGTCTT
* * * *
6453782 CCCATGAAACTTTATGTGAAGGCTTAAGGGACCGTTGTATGAATTTACAAGCCATAAAAATGGCA
511 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
** * * *
6453847 TTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTGCCACCATATCGATCTACGGCTTGCG
576 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * ** * * *
6453912 CATCTCGTCTCTTTGGACAACATAGTGCCCGCCCGCCCGCTCGTTTCATC-G-GGTTTAGGCATA
641 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTGGCTTAGGCATA
* * * * * *
6453975 TGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGTGGTAGAAGGATCGATAGCACA
706 CGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGACAGCACG
*
6454040 CCGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCA
771 CAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCA
* * *
6454105 CGCTAGTTTCATGGGTTGACTTAGGCAGACGGAGTTCATTCCCAGTCTAA
836 CGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
6454155 GCATACGGAGTTCATTCCCAGTCTAAAATGAGACCGGACCGAGGGTTGTGGCAGTACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATG-GACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * **
6454220 CTCGGGCATGTGCTGGTGCTGCATTTTTCTTCGTCGGGGCGCCATCACCGGAGCATCGTCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
** * *
6454285 ACCTGATTGGCGACATTAGGGTTCCGACGATCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
130 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * *
6454350 CTGGTACTTGGCCCTTATATTCGCCCCCTATCCTTCATCAAACCTCAAGAACTCACACCCCCTTA
195 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* * *
6454415 AAGGGCATTTGAGATTTTATAGGTTTGCTGCCGGTAGCCATTAAAGTG-CGTGAAATGGGGACAC
260 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC-TGAAATGGGGACAC
*
6454479 TTTTTTCAAATGGTCGCAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
324 TTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCC
** * * * * *
6454544 AACAAAAATACAAGGATCACGTCTAGAAAGTTTAGAGCCAAAATTACTTCCAAAAAAATTTTAAA
389 AACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAA
* * * *
6454609 AAATCCCGAACCGCAAAAAGTTACGAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCATGAA
454 AAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAA
*
6454674 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATGGCATTGGCATG
519 ACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATG
* * * * * *
6454739 CAGAAATATGATGATGTGCCTAAACGCACCTACCAACCTATCGATCCATGGCGTGTGCATCCCGT
584 CAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGT
* * *
6454804 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGATTCGTCAGTTGGCTTAGGCATACGAAGTT
649 CTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTC-GGTGGCTTAGGCATACGGAGTT
* ** *** * * * * * *
6454869 CATTCCCAATCTAAGATCAGACTGGATTGAGGGTTGCAGTAGTAGGATCGGCAGCACACAAAAGG
713 CATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGG
* ** * ** *
6454934 GGACCCAGTTGATCCCCGGCTTACGCAT-CTCGCCCCTCTGGCCGATTGAGCGCCCGCATGCTCG
778 GGACCCGGCCGATCCCCGGCTTGCGCATCCT-GCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCG
* * *
6454998 TTTCGTGGGTTGACTTAGGCAAATGGAGCTCATTCCCAGTCTAA
842 TTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
6455042 GCATACGGAGTTC-TTCCTAGTCTAAGATTAGACCGGACCGAGGGTTACGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGA-TGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
6455106 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATCATCGGAGCATCATCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * * ** * * * *
6455171 ACTTGACCGGCGGCATTAGGGTTTCGGTGATTGGGGGGGCCAGGGGGTTTGCGCACGTGATGTGT
130 ACCTGACCGGCGGCATTGGGGTTCCGACGA-T----CGG---GGGGGTGTGCGCACATGATGTGC
* **
6455236 GATGGGTGCTGGTACTTGGCCCTTATATTTGCTGCCTATCCCTCATCAAACCTCGAGAACTCACA
187 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
6455301 CCCCCATATAGAGCATTTGAGAATTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
252 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
6455366 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTTTTTAT
317 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * * * * * *
6455430 GCATGCCAAAAAAAATACAAGGATCACATCTACCAAGTTTAGAGCCAAAATTACTTCCAAAAAAA
382 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* * *
6455495 TTTTAAAAAATCCCGAACCGCAAAAAGTTTCGAAAATCATGAAAAATAGAAAACGAGTCATCTTG
447 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* * *
6455560 CCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCAATAAAAATTGCAT
512 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * *
6455625 CGGCATGCAGAAATATGATGATGTGCCTAAACCCACCTACCAACCTATCGATCCACGGCGTGTGC
577 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * *
6455690 ATCCCGTCTCTCTGGCCGGCATAGTGCCCGCCCGACTGCCCGCCCTATCGATTCATCGGTTGGCT
642 ATCCCGTCTCTCTGGCCGGCGTAGTGCCCG-CC--C-GCCCG--C--TCGTTTCGTCGG-TGGCT
* ** ** * * *
6455755 TAGGCATACGAAGTTCATTCCCAGTCTAAGATCAGACTGGACTGAGGGTTGTGGCAGCAGCATCG
698 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCG
** * * * * *
6455820 GTAGCATGCAGAGGGGTACCCGGCCGAT-CCCGGCTGTGC-AATCCCGCACCTCTGGCCCGGCTG
763 ACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCT-TGCGCATCCTGCCCCTCTGG-CCGGCTG
* * * *
6455883 CACGCCGGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGGATTCGGAGTTCAATCCTAGTCTACA
826 -A-G-C-GCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA-A
* ** ** *
6455948 GCATACGGAGTTCATTCCCAGTCTAAAGAGCGGAGTGGACCGAGGGTTGCGATAGCACATGTTGG
1 GCATACGGAGTTCATTCCCAGTCT-AAGA-TGGACCGGACCGAGGGTTGCGGCAGCACATGCTGG
6456013 GCTCGGGCATGTTGCTGGTGCCTCGCATTTTTCTTTCGTCGGGG---CA----C--A--ATCG-C
64 GCTCGGGCATG-TGCTGGTG-C-CGCATTTTTC-TTCGTCGGGGCACCATCGTCGGAGCATCGTC
*
6456066 -GAGAACCTGATCGGCGGCATTGGGGTTCCGACGATCGGGGGGCCCGGGGGGTGTGCGCACATGA
125 GGAGAACCTGACCGGCGGCATTGGGGTTCCGACGATC-----G---GGGGGGTGTGCGCACATGA
* * *
6456130 TGTGCGATGGGTGCTGGTTCTTGGCCCTTATATTGGCCCTCTAGCCCTCATCAAACCTCGAGAAC
182 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAAC
6456195 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
247 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * *
6456260 AAATGGGGACACTTTTTTCAAATGGTGACAAAATCTTGTACAATGCGAGTTTTTAGCTGAATTTT
312 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAA-TTT
* *
6456325 TTTTTTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGG-CAAAACTCCTTCCA
376 TTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCG
* * * * *
6456389 AAAAAATTTTAAAAAATCCTGAACCGTAAAATGTTTCGAAAATCGTGAAAAATAAAAAACGAGTC
441 AAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTC
* *
6456454 GTCTTGCCATGAAACTTCACGTGAAGGCTTAGGGGACCATAGTATGAATTTACAAGCCATAAAAA
506 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAA
6456519 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
571 TGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGC
* * * ** * *
6456584 TTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCTGCCCGCCCG-CCCGCTCGTTCG-TT-
636 TTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCG-TCGGTGGCTTA
* ** * * * * ** * *
6456646 -TCAT-C-G-GTT--GGCTCAGGC--ATA-C-GA--AGATCAA---TT-CGAGT-TTAAGATTAG
700 GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCG-GTAGCAGGA-TCG
** ** * * ** *
6456694 ACCAG-AC-CA-A----GTTCAAGTCGATCCCTGGCTTGCGCATCCCACCCCTCTGGCCGGTTGA
763 A-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
** *
6456752 ATGCCCGCTCGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
827 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ** *
6456811 GCATACGGAGTTCATTCCCAG-CTAGGATCGGATCGGACCGAGGGTTACGATAGCACATGTTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
*
6456875 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGACGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* **
6456940 ACCTGACCGGCAGCATTGGGGTTCCGGTGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
130 ACCTGACCGGCGGCATTGGGGTTCC---GA-C-----GATCGGGGGGGTGTGCGCACATGATGTG
* *
6457005 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCCCAAGAACTCAC
186 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
6457070 CCCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG-GTCTAAAAT
251 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
6457134 GGGGACACTTTTTCCAAATGGTGACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
316 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
** *
6457199 TGCATGCCAA-AAAAACTACAAGGATCACGTCTAAAAAGTTTGGGG-CAAAACACCTTCCGAAAA
381 TGCATGCCAACAAAAA-TACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * * *
6457262 AATTTCAAAAAATCACGAACCGCAAAATGTTTCGAAAATCATGAAAAATAGAAAACGAGTCATCT
445 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* * * * *
6457327 TGCCATGAAACTTCATGTGAAGGCTTAAGGGACCATTGTATGAATTAAAAAGCCACAAATATGGC
510 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
** *
6457392 ATTGGCACACAGAAATATGAAGATGTACCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
575 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* *
6457457 GCATCCCGTCTCTCTGGCCAGCGTAGTGCCCGCACGCCCGCCCTTCCGCTTCGTTCGTCGGTTGG
640 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG--C-T-CG--T--TTCGTCGG-TGG
* ** * * * * *
6457522 CTTAGGTATACAAAATTCATTCCCATTCTAAGATCAGACCAGACCGGATCGAGGTTTGTGGCAGC
696 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACC--A---AGGGTTGCGGTAGC
** * * * * * *
6457587 AGGATCGGTAGCATGCAGAAGGAGACCCGGCCGATCCCCAGCTTGCGCATCAC-ACCCCTTTGGC
756 AGGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATC-CTGCCCCTCTGGC
* * * *
6457651 CAGCTGAGCGCTCGTACG--C---T--T--GTT---TTA---AT---G-GTTGA----C--T-TA
820 CGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTA
*
6457690 G
885 A
* *
6457691 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTT-CTGGCAGCACATACTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGC-GGCAGCACATGCTGG
* ** * *
6457755 GCTTGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCATCAGAGCATCGTCGGAG
64 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
*
6457820 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGCCAGGGGGCGTGCGCACATGATGTG
129 AACCTGACCGGCGGCATTGGGGTTCCGACGATC-----GG---GGGGGTGTGCGCACATGATGTG
* *
6457885 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCTTATCCCTCATCAAACCTTGAGAACTCAC
186 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * *
6457950 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAATAGCCATTGAAGTATCTGAAAT
251 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* *
6458015 GGGGACACTTTTTTCAAGTGGTCACAAAATCTTGTACACTTCGAGTTTTTGGCTGAA-TTTTTTG
316 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * * *
6458079 TGCATTCCTACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCTAAAACACCTTCCGAAAAA
381 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * ** * *
6458144 ATTTTAAAAAATCTCGAACCATAAAAAATTTTGAAAATCATGAAAAATAGAAAATGAGTCATCTT
446 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
* *
6458209 GCCATGAAAGTTCACGTGAAGGCTTAAGGGTCCATTGTATGAATTTACAAGCCATAAAAATGGCA
511 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* *
6458274 TTGGCATGCAGAAATATGAAAATGTGCCTAAACCCACCTACCACCCTATTGATCCACGGCTTGCG
576 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
6458339 CGTCCCATCTCTCTGGTCGACGTAGTGCCCGTCCGCTCGCCCGCCCGCTTGCCCACCCGCTTGTT
641 CATCCCGTCTCTCTGG-C--C---G-G--CGT-AG-T-GCCCG-CC-C--G----CCCGCTCGTT
* * *
6458404 TCGTCGGTTGGCTTAGGCATACGGAGTTCGTT-CCAGTCTAAGATCAAACCACACCAAGGGTTGC
686 TCGTCGG-TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGC
* ** * * * **
6458468 GGCAGCAGGATCGGTAGCACGTAGAGGGGGACCCGGTCGATCTCTAGCTTGCGCAT-CTCGCCCC
750 GGTAGCAGGATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCT-GCCCC
* * * * *
6458532 TCTGGCCGACTGAGCACCCGTACGCTCGTTTCATGGGTTGACTGAGGCATACGGAGTTCATTCCC
814 TCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCC
* *
6458597 AATCTAG
879 AGTCTAA
* * * * * * * **
6458604 GCATACGAAGTTCATTCTCGGTCTAAGATCGAACCAGACCAAGGGTTACGATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * **
6458669 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGCCGGGGCACCATCACCGGAGCATCGTCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* *
6458734 ACCTGACCGGCGGCATTGGGGTTCCGACGATAGGGGGGCCGGGGGGGTGTGTGCACATGATGTGT
130 ACCTGACCGGCGGCATTGGGGTTCCGACGAT--------CGGGGGGGTGTGCGCACATGATGTGC
* *
6458799 GATGGGTGCTAGTACTTGGCCCTTATCTTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
187 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * *
6458864 TCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCAGCCAGTAGCAATTAAAGTGTCTGAAATG
252 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
*
6458929 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTT-GAAGTGTTTAGCTGAATTTTTTTG
317 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG-AGTTTTTAGCTGAATTTTTTTG
* * *
6458993 TGCATGCCAAAAAAAATACAAGGATCACTTCTACCAAGTTTGGGGTCAAAACTCCTAT-CGAAAA
381 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCT-TCCGAAAA
* * *
6459057 AATTTTAAAAAATCCCGAAACGTAAAAAGTTTCAGAAATCATGAAAAATAAAAAACGAGTCGTCT
445 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
*
6459122 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCGTAAAAATGGC
510 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
*** * *
6459187 ATTGGCACATAGAAATATGAAGATGTGCCTAAACCCACCTACCACGCTACCGATCCACGGCTTGC
575 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * *
6459252 GCATCCTGTCTCTCTGGCCGACGTAGT----GCCAGCCCGCTCGTTTCGTCGGTTGGCTTAGGCA
640 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGG-TGGCTTAGGCA
* * * * * * *
6459313 TACAGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACAGTAGCATGATAGACAGCA
704 TACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGACAGCA
* * * * * * * *
6459378 CGTAGAGGGGGACCCGACCGATCCCCGACTTGTGCATCCCGCCCTTCAGGCCGGCTGAGCACCCG
769 CGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCG
* * * *
6459443 CAAGCTTGTTTCGTGGGTTGAGTTAGGCATACAGAGTTCATTCCCAGTCTAA
834 CACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ***
6459495 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACTGGACCAAGGGTTACAATAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * *
6459560 CTCAGGCATGTGCTGGTGCCG--TATTT-TTC-T----------TCGTCGGAGCATCGTCAGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * * *
6459611 ACCTGACCGACGACATTGGGGTTTCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACAAGATGTG
130 ACCTGACCGGCGGCATTGGGGTTCCGACGAT---------CGGGGGGGTGTGCGCACATGATGTG
* *
6459676 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCTTCATCAAACCTCAAGAACTCAC
186 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
6459741 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
251 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
6459806 GGGGACACGTTTTTCCAATGGTCACAAAATCTTGTACACTTCGACTTTTTAGCTGAATTTTTTTA
316 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTG
* * *
6459871 TGCATGCCAACAAAAATACAAGGACCATGTCTA--ATAGTTTGGGGCCAAAACTCCTTCCAAAAA
381 TGCATGCCAACAAAAATACAAGGATCACGTCTACCA-AGTTTGGGGCCAAAACTCCTTCCGAAAA
* ** * *
6459934 AATTTTAAAAAATCCCAAACCGTAAAAAGTTTTGAAAATCATAAAAAATAGAAAACGAGTTGTCT
445 AATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCT
* ** *
6459999 AGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAACAGT
510 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* * *
6460064 ATTGGCACGCAAAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGC
575 ATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * *
6460129 GCATCCCGTCTGTCTGGCCGGTGTAATGCCTGCCCGGCCGTCTGCTCGCTCGTTTCATCGGTTGG
640 GCATCCCGTCTCTCTGGCCGGCGT-A-G--TGCCC-GCC--C-GCCCGCTCGTTTCGTCGG-TGG
* * * * * *
6460194 CTTAGGCATACGGACTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGTGGCAGCAGGAT
696 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGAT
* * * * *
6460259 C-AGCAGCACGTAGAGGGGGACCCGACCGAACCCCGGCTTGCGCATCCCGCCCCTCTGGCCGGTT
761 CGA-CAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCT
* * * *
6460323 GAGCGTCTGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTAATTCCCAGTCTAA
825 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* *
6460384 G-AT-C-G-G---------A--CT-AGAT----C-G--C--GGGTTGTGGCAGCACATTCTGGGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * * * *
6460424 TCGGGCATGTGCTGGTGCCACATTTTTCTTC-TCCGGGCCACCATCGTTGGAGCATCGCCAGAGA
66 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGT-CGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * * * * * * *
6460488 ACCTGACCGGTGGCATTTGGCTTACGGCAATCAGAGGCGCCGGGGGG-GTGTGTACAAGATGTGC
130 ACCTGACCGGCGGCATTGGGGTT-C--CGA-C-GA-TCG--GGGGGGTGTGCGCACATGATGTGC
*
6460552 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACATCGAGAACTCACA
187 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* *
6460617 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCAGCCAGTAGCCATTAAAGTATCTGAAATG
252 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
6460682 GGGACACTTTTTTCAAATGGTCACAAAATCTTGCACACTTCCAGTTTTTAGCTGAAATTTTTTGT
317 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
* * *
6460747 GCATGCCAACAAAAATACAAGGATCACATCTA--ATAGTTTGGGGCCAAAACTCCTTGCAAAAAA
382 GCATGCCAACAAAAATACAAGGATCACGTCTACCA-AGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * * * * *
6460810 ATTATAAAAAATCCCGAACTGCAAAAAGTTTTAAAAATCGTGGAAAATAGAAAACGGGTCGTCTT
446 ATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTT
6460875 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
511 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
*
6460940 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACTTACCACCCTATCGATCCACGGCTTGCG
576 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* *
6461005 CATCCTGTCTCTCTGGCCAGCGTAGTGCCCGCCTGCCCGCCCGCCCGCACGTTCGTTTCGTCGGT
641 CATCCCGTCTCTCTGGCCGGCGTA------G--TGCCCGCCCGCCCG--C--TCGTTTCGTCGG-
* ** * * *
6461070 TGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATGGGACCGGACCAACGGTTGTGGTAGCAG
693 TGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAG
* * * * * * *
6461135 GACCGGCAGCACGCAGAGGGGGACCCGGCCGATCCCCGACTTGCTCATTCTGCCTCTCTGGGCGG
758 GATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGG
* * *
6461200 CTGAGCACCTGTACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG--T--
823 CTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
6461259 -C-TA---AG---------A-TC------GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * *
6461303 TCGGGCATGTGCTGGTGCTGCATTTTTCTTC-CCTGGGGCACCATCGTCGGAGCATCGCCGGAGA
66 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGTCGGAGA
*
6461367 ACCTGACCGGCGGCATTGGGGTTTCGACGATCGGGGGGCCCGAGAGGGGGGTGTGCGCACATGAT
130 ACCTGACCGGCGGCATTGGGGTTCCGACGAT---------C--G-GGGGGGTGTGCGCACATGAT
* * *
6461432 GTGTGATGGGTGCTGGTGCTTGGCGCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
183 GTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * * *
6461497 CACACCCCCTTAAAGAGAATTTGACATTTTACAGGTTTGCTACCAGTAGCCATTCAAGTGTCTGA
248 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
** * *
6461562 AATGGGGACACTTTTTTCAAATGGTCGTAAAATCTTGTACACTTCAAGTTTTTAACTGAATTTTT
313 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * * *
6461627 TTGTGCATGCCTATAAAAATATAAGGATCACGTTTACCAAGTTTGGGACCAAAACTTCTTCCGAA
378 TTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAA
* * * * **
6461692 AAAATTTTTAAAAATCTCGAACCGCAAAATGTTTTGAAAATCATGAAAAATAGAAAACGAGTCGT
443 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
*
6461757 CTTCCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
508 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
6461822 GCATTGGAATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATCGATTCACGGCTT
573 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
*
6461887 GCGCATCCCGTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGTCCGCCCGCTCGTTTCGTCGGTT
638 GCGCATCCCGTCTCTCTGGCCGGCGTAGT----GCCCG--C--CCGCCCGCTCGTTTCGTCGG-T
* * * * *
6461952 TGCTTAGGCATACGGAGTTCATTCCCAGTCTATGATCTGACC-GAATC-AGGGTTGCGATAGCAG
694 GGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCAAGGGTTGCGGTAGCAG
* * * * * * * * *
6462015 GATCGACAGTATGTAGAGGGGTACTCGGCCGATCCGCAGCTTACGCAT-CTCGCCCCTCTGGCCA
758 GATCGACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCT-GCCCCTCTGGCCG
* * * *
6462079 GCTGAGCACCCGCAAGCTCGTTTCGTGGGTTGACTTAGGCATACAGAGTTAATTCCCAGTCTAA
822 GCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
6462143 GCATTCAGAGTTCATTCCAAGTCTAAGATCGGACTGGACCGTGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * ** * * * *
6462208 CTCGGGCAAGTGCTGGTACCGCATTTTTCTTCACCGAGGCACCGTCTTTGGAGCAATAC--CGGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGC-AT-CGTCGGA
* * * *
6462271 GAACCTGACCGACAGCATTGGGGTTCCGACGATCGGGAGGGCCAGGGGGCGTGCGCAAATGATGT
128 GAACCTGACCGGCGGCATTGGGGTTCCGACGATC-----GG---GGGGGTGTGCGCACATGATGT
6462336 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT-TCCCTCATCAAACCTCGAGAACTCA
185 GCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
6462400 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCTAGTAGCCATTAAAGTGTTTGCAA
250 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
*
6462465 TGGGGACACTTTTTTCAAATGGTCCCAAAATCTTGTACACTTCGAG-TTTTAGCTGAATTTTTTT
315 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
6462529 GTGCATGCCAACAAAAATACAAGGATCATGTCTA-CAA-TATCTGGGGCCAAAAATCCTTTCGAA
380 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGT-T-TGGGGCCAAAACTCCTTCCGAA
*
6462592 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACAAGTCGT
443 AAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
*
6462657 CTTGCCAAGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
508 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
*** * * *
6462722 GCATTGGCACATAGAAATAAGAAGATGTACCTAAACCCACCTACCACCCTATCGTTCCACGGCTT
573 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
6462787 GCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCACCCGTCCGCTCGTTTCATCTGTTGGCTTAGG
638 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTC-GGTGGCTTAGG
* * * * *
6462852 CATACGGAGTTCATTCCCAGTCTAAGATCAGA-CTGAATCGAGGGTTGCGGCAGCAGGATTGACA
702 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCAAGGGTTGCGGTAGCAGGATCGACA
* * * * * * *
6462916 GTACGCAGAGGGGGACCTGGTCGATCCCCGACTTGCGCATCCCGCCCCTTTGGCCAGCTGAGCGC
766 GCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGC
* * *
6462981 CTGCACACTCATTT--T--G-TG-----GG---AC-GA--T--TT---AG-----
831 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
6463010 GCATATGGAGTTCACTCCCAGTCTAAGATCGGACCGGACTGAGGGTTACGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * ** * *
6463075 CTCGAGCATGTGCTAGTGCCGTATTTTTCTTCACCGAGGCACCATCGTCGGAGCATCGCCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* ** *
6463140 ACCTGACCAGCGGCATTGGGGTTTTGACGATCGGGGGGGCCGGGGGGTGTGCACACATGATGTGC
130 ACCTGACCGGCGGCATTGGGGTTCCGACGATC------G--GGGGGGTGTGCGCACATGATGTGC
6463205 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
187 GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
* * * * *
6463270 -CCCCTTAAAGAGTATTTGAAATTTTATAGGTTTGCTGCCCGTAGCCATTAAAGTGTCCGAAATG
252 CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
* * *
6463334 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACAGTTCAAGTTTTTAGCTGAATATTTTTGT
317 GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGT
6463399 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
382 GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
* ** * *
6463464 TTTTAAAAAATCCCGAACCGAAAAAAGTTTCAAACTTCGTGAAAAATAGAAAACGGGTCGTCTTG
447 TTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTG
* * *
6463529 CCATGAAACTTCACGTGAAGGCTTAAGGGACCACTGTATGAATTTACAAGCCAGAGAAATGGCAT
512 CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
*
6463594 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
577 TGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
* * *
6463659 ATCCCGTCTCTCTGGCCGGCGTAGTACCCACCCACCTGCCCACCCGCTCGTTTCGTCAGTTGGCT
642 ATCCCGTCTCTCTGGCCGGCGTAGT------GC-CC-GCCCGCCCGCTCGTTTCGTC-GGTGGCT
* * *
6463724 TAGGCATACGGAGTTCATTCCCAGCCTAAGATC-GAATCAGACCAAGGATTGCGGTAGCAGGATC
698 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCAAGGGTTGCGGTAGCAGGATC
* * * * * * **
6463788 GACAGCACGTAGAGGAGGACCCGGTCGATCCTCGGTTTGCGCATCCCGCTGCTCTGGCCGGCTGA
762 GACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
* * * *
6463853 GCACCTGCACGCTTGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATACCCAG--T--
827 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
6463908 -C-TA---AG---------A-TC------GGACCGGACTGAGGGTCGTGGCAGCACATGCTGGGC
1 GCATACGGAGTTCATTCCCAGTCTAAGATGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
* * ** *
6463952 TCGGGCATGTGCTGGTGCCACATTTTTGTTTTTCGCGGCACCA---TC---G---C--CGGAGAA
66 TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAA
* * *
6464006 CTTGACCGACGGCATTGGGGTTCC-AGCGATCGGGGGGGCCCGGGGGGGTTGTGCGCACATAATG
131 CCTGACCGGCGGCATTGGGGTTCCGA-CGAT----------CGGGGGGG-TGTGCGCACATGATG
* * ** *
6464070 TGCGATGGGTGCTGGTACCTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACAGCAAGAACTC
184 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
6464135 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGAA
249 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
6464200 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACCTCGAGTTTTTAGCTGAATTTTTT
314 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * * *
6464265 TTTGCTTGCCAACAAAAATACAAGGATCTCGTCTACCAAGGTTGGGACCAAAACTCCTTCC-AAA
379 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* ** *
6464329 GAAATTTT-AAAAATCCTGAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTCGT
444 -AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGT
*
6464393 CTTGCCATGAAACTTCACGTGAAGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
508 CTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
6464458 GCATGGGCATGCAGAAATATGAAGATGTCCCTAATCCCACTTACCACCCTATCGATCCACGGCTT
573 GCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * ** * *
6464523 GTGCATCCCATCTCTCTGGCTAGCGTAGT----GCCAGCCCGCTCGTTTCGTCGGTTCGCTTAGG
638 GCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGG-TGGCTTAGG
* * * * *
6464584 CATACAGAATTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTACGGTAGCAGGATCGACAG
702 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGACAG
* *** ** * *
6464649 CACACA-ACGGGGGACCCAATCGATCCCTAGCTTGCACATCCCGCCCC-CTTGGCCGGCTGAGCG
767 CACGCAGA-GGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTC-TGGCCGGCTGAGCG
* * * *
6464712 CCCGCACGCTCGTTCCGTGGGTTCACTTAGGCATACGGAGTTCACTCCCAATCTAA
830 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
6464768 GCATGCAGAGTTCGTTCTCAGTCTAAGATTGGACCAGACCGAGGGTTGCGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGA-TGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * * *
6464833 CTCGGGCATGTGCTGGTGCCGTATTTTTCTTC-ACTGAGGCACCTTCGTCGGTGCATCGTCGGAG
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTC-GGGGCACCATCGTCGGAGCATCGTCGGAG
* ** *
6464897 AACCTAACCGGCGGCATTGGGGTTCCGGTGATCGGGGGGGCCAGGGGTGGTATGCGCACAAGATG
129 AACCTGACCGGCGGCATTGGGGTTCCGACGATC----GGG---GGGGT-G--TGCGCACATGATG
* *
6464962 TGCAATGAGG-GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACT
184 TGCGATG-GGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACT
* * *
6465026 CACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCCATTAAAGTGTCTAA
248 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* * * * * *
6465091 AATGAGGACAGTTTTTTCAAATGGTCACAAAATATTGTAGACTTTGAGTTTCTAGCTGAAATTTT
313 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATTTT
* * * * *
6465156 TTT-TGCATGCAAAAAAAAATACAAGGATTACGTCTACTAAGTTTGGGGCCAAAACTCTTTCCGA
377 TTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGA
* * *
6465220 AGAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAATACGAGTCG
442 AAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCG
*
6465285 TCTTGCCATGAAACTTCACGTGAAGGATTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
507 TCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAAT
* * *
6465350 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACACACCTACTACCCTATCAATCCACGGCT
572 GGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCT
* * *
6465415 TGCGTATCCCGTCTCTCTGGCCGGCGTAGT----GCCAGCCCGTTCGTTTCGTCGGTTGGCTTAG
637 TGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGG-TGGCTTAG
* ** * * **
6465476 GCATACGGAATTCATTCCCAGTCTAAGATTGGACCATACCAAGGGTTACGACAGCAGGATCGACA
701 GCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGACA
* * * * * *
6465541 GCACGCAGTA-GGGGACCCGGCCGATCCCCGGGTTGTGCACCCTGCCCCTTTGGCCAGCTGAACG
766 GCACGCAG-AGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCG
* * * *
6465605 CCCACACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAATCTAA
830 CCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * ** * ** *
6465661 GCATATGGAGTTCATTCCAAGCCTAAGATCGAGGCCGGATTGAGGGTTACGATAGCACATGCTAG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-G-GACCGGACCGAGGGTTGCGGCAGCACATGCTGG
*
6465726 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
64 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
* ** **** * * *
6465791 AACCTGACCGACGGCATTGGGGTTCCGGA-GATCGAGGGGGCCG-G-G-GGGGGTTCTCGCACAT
129 AACCTGACCGGCGGCATTGGGGTTCC-GACGATCG-GGGGGGTGTGCGCACATGATGT-GC-GAT
* * * *
6465852 -GATG-TGGTACTTGGCCTTTATATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCACACCC
190 GGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCC
* * *
6465915 CCTTAAAAAGCAATTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAACTGTCTGAAATGGGG
255 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
* * * * * *
6465980 ACACTTTTTTCAAATGGTCGCAAAATCTTCTACACTTAGGGTTTTTACCTGAATTTTTTTATGCA
320 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
*
6466045 TGCCAA-AAAAATACAAGGATCACGTCTACCAAGTTTTGGGCCAAAACTCCTTCC-AAAGAAATT
385 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA-AAATT
** ** * * *
6466108 TTAAAAAATCCCGAACCACAAAAAGTTTTGAAAATCAAGAAAAATAAAAAATGAGTCGTCTTGCC
449 TTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCC
* * *
6466173 ATGAAACTTCACGTGAAGGCTTAAAGGACCACTGTATGAATTTACAAGCCATAGAAATGGCATTG
514 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * *
6466238 GCATGTAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTACGTAT
579 GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCAT
* * *
6466303 CCCCTCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGTCCACTCATTTCGTCGGTTGGCTTAGGCA
644 CCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCG----CTCGTTTCGTCGG-TGGCTTAGGCA
* * * * * *
6466368 TACGGAGTTCATTCCTAGTCTAAGATC-GAACCGGATCGAGGGTTGTGGCAGCAGGATCGACAGC
704 TACGGAGTTCATTCCCAGTCTAAGATCAG-ACCAGACCAAGGGTTGCGGTAGCAGGATCGACAGC
* * * *
6466432 ACGTAGAGGGGGACCCGGTCGATCCCCGGCTTGCACAT-CTCGCCCCTCTGGCCGGTTGAGCGCC
768 ACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCT-GCCCCTCTGGCCGGCTGAGCGCC
*
6466496 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
832 CGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* ** * * * * * **
6466550 GCATACGAAGTTCATTCCCAACCTAAGATCAGATCAGACCAAAGGTTGAAGCAGCCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAG-CACATGCTGG
* * *
6466615 GCTCAGGCATGTGCAGGTGCCGCATTTTTCTTCGTCGAGG---CA----C----CATCGTCGGAG
64 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
* * *
6466669 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGAGGTGTGCACACACGATG
129 AACCTGACCGGCGGCATTGGGGTTCCGACGAT---------CGGGGG-GGTGTGCGCACATGATG
* *
6466734 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAGACCTCGAGAACTC
184 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
6466799 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
249 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
*
6466864 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTTTT
314 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* ** * * * * *
6466929 TATGCATGCCAACAAAAATACAAGGATCATATTTATCAAGTTTGGGGCCAAAAATCCTTCTGTAA
379 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * * * *
6466994 AAATTTTGAAAAATCCCGAACTGTAAAAAGTTTCAAAAATTATGGAAAATAAAAAACGAGTCGTC
444 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* * **
6467059 TTGCCATTAAACTTCACGTGAAGGCTTAAGCGACCATTGTATGAATTTACAAGCCATAAAAATAC
509 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* *
6467124 CATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCACGGCTTG
574 CATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* * * * * ** ** * * * **
6467189 CGCTTCTCGACTCTCTGGCCGCCGTAGTACCCGCCCGCCTAC-C-CATGGGC-AT-GC--AGAAA
639 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTGGCTTAGGCA
* * ** * ** * ** * * * * ** * ** *
6467248 TATGAAGATGTGCCTAAACCCA-CCTACCACCCTATC-GATCCACGGCTTGCGCTTCCCGTCTCT
704 TACG--GA-GT-TC-ATTCCCAGTCTAAGATCAGACCAGA-CCAAGGGTTGCGGTAGCAGGATCG
*** * ** * * * ** * ** *
6467311 TTGGC-CG--GCGTAGTACCCGCCCG--CCCAC--C---CGC-TCGT-TTCATCT-GTTGGCTTA
763 ACAGCACGCAGAGGGGGACCCGGCCGATCCC-CGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
*** * * * *** * **** * **** **
6467363 GACATACGGA-GTTC-ATTC-CCAG-T--C-TAAG-AT-CGGACCGGACTGAGGGT-TGTG
827 G-CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT-AA
** ** * * * * ** * * *
6467414 GCAATA-GGA--TCGGTAGCA--CTTAGA-GG--GGGACCCGATTGATCACCGGCTTGCGCATCC
1 GC-ATACGGAGTTCATTCCCAGTCTAAGATGGACCGGA-CCGA-GGGT-TGCGGC-AGCACATGC
** * * * * * *** * * * *
6467471 TGCCCCTCTGGC--CTGCT-GAGCACCCGTACGCTCGTTTCAT-GGGTTG-ACTTAGGCATACAG
61 TG-GGCTCGGGCATGTGCTGGTGC-CGCAT-TTTTC--TTCGTCGGG--GCAC-CA-TCGT-C-G
* * * * * ** *** ** *
6467531 AATTCAT-TTC-CAGTCTACGCAT-ACCGAG-TTCATTCCCAGTCTAAGATTGGATCGGGCTGAG
115 GA-GCATCGTCGGAG--AAC-C-TGACCG-GCGGCATT-GGGGT-TCCGA--CGATCGGG--G-G
* * *** * ** * * **
6467592 GGT-TGCGATAGCACATGCTGGGCTCGGGCATGTGCTGGTGC-T-GCATTTTTCTTCGTCAGGGC
167 GGTGTGC----GCACATGATGTGCGATGG---GTGCTGGTACTTGGCCCTTATATT-G---GCCC
* ** * * * * * ** * ** * ** **
6467654 ACTATCGTTGGAGCATCACC-GGAGAACCTGACCGACGGCATTAGGGTTTCGGCGATCGGAGGGG
221 CCTATCCCT-CATCA-AACCTCGAGAA-CTCA-C-ACCCCCTTAAAG----AGC-ATTTGA-GAT
****** * * * **** * * ** *
6467718 CCGGGGGGTGTGC-GCACAGGATGTACGATGGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTA
275 TTTACAGGTTTGCTGC-CAGTA-G--CCATTAAAG-T-GT-C-T-G-----AAATGGGGACACT-
** * **** ** * ** *
6467782 TCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAACAACATTCGAGATTTTA-C--AGGTTTG
325 T---TTTTCAAA--T---G--GTCACAAAATCTTGTAC-AC-TTCGAGTTTTTAGCTGAATTTTT
* ** ** ** * * * ** * *
6467844 CT-ACCAGTAGCCATTAAAGTGTCAGAAATGGGGA-CACTTTTTTCAA--AT-GGTCACAAAA-T
378 TTGTGCA-T-GCCAACAAA-AAT-A-CAA---GGATCACGTCTACCAAGTTTGGGGC-CAAAACT
* * * * * **** * * * ***** ** *
6467903 -CTT--G--TACACTTT---GAGTTTTTAGCTG-AAATA-TTTTGTGCATGCCAACAAAAATACA
434 CCTTCCGAAAAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAAT--CATGAAAAATAGA
** *** *** ***
6467958 AGGATCACGTCTACCAAGT-TTGCGGCCA--AAACTCCTTC-CAAAAAAATTTTAAAAAATCCTG
497 A--A--ACGAGT--C--GTCTT---GCCATGAAA---CTTCAC-GTGAAGGCTTAAGGGA-CC--
** ** * ** * * ***
6468019 AACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTTTTGCCATGAAACTTCACG
544 -ATTGTATGAA-TTT-ACAAGCCAT-AAAAAT-G---GC-A-TTGGCATG-CA-GAAA--T-A--
* * ** *** * * * *** * * ** *
6468084 TGAAGGCTTAAGGGACCATTGTATGAACTTACAAGCCATAAAAATGGCATTGGCAGGCAGAAATA
592 TGAA-G---ATGTG-CC--TAAACCCACCTACCA-CCCTATCGAT-CCA-CGGCTTGC-G---CA
*** * * * * *** *** * **
6468149 TGAAGATGTAC-CTAAAGCC-ACCTACCACCCTATCGATCCACGGCTTGCGCATCTCGTCTCTCT
643 TCCCG-TCT-CTCT--GGCCGGCGTAGTGCCCGCCCG--CC-C-GC-T-CG--TTTCG--TCGGT
*** * **** * * * * * * * * * *
6468212 GGCCAATGTAGTGCCCGCCCGCCCGCCTGCGCGCTTGTTTCGTCAG-T-TGGCTTAGGCGTATGG
694 GG-C--T-TAG-G-CATACGGAGTTCATTC-C-C-AG--TC-TAAGATCAGAC-CAGAC-CAAGG
** * * * * ** *
6468275 AGTT-CATTCCCAGTCTAAGATCAGACTAG-AC-CA-AGGGTTG--CGGTAGCAGGATCGGCAGC
745 -GTTGCGGT---AG-C-AGGATC-GAC-AGCACGCAGAGGG-GGACCCG--GC-CGATCCCCGGC
** **** * * * * * * * * *
6468334 ACGCAG-AGGGGGACCCGATC-GATCCTCGGCTTA-CGCATCACAC-C-C--CTC-T-AGCTGGC
798 TTGC-GCATCCTG-CCC-CTCTG--GC-CGGCTGAGCGC-CCGCACGCTCGTTTCGTGGGTTGAC
* * * * *** *
6468390 TGAGCGC-T-CGCACGCTCGTTTCGTGGGTTGACTTAG
856 TTAG-GCATACGGA-GTTC-ATTC-CCAG-T--C-TAA
* * * * * **
6468426 GCAGATGGAGTTCATTCCCAGTCTAAGCATACGA-AGTGACCGAGGGTTGTGGTGGCACATGCTG
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-GGACCG-GACCGAGGGTTGCGGCAGCACATGCTG
* * **
6468490 GGCTCGGGCATGTGCTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCG-CTGG
63 GGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTC-GG
*** * * * *
6468554 AGAACCTGACCGATTGAATTGGGGTTCTGGCGAT-TGGGGGGTGTGCGCACATGATGTGCGATGG
127 AGAACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTGTGCGCACATGATGTGCGATGG
* * *
6468618 GTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACTTCGAGAACTCACATCCCC
192 GTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCC
* * *
6468683 TTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGAAATTGGGAC
257 TTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGAC
* * *
6468748 ACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGTAGG
322 ACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATG
* * * *
6468813 CCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTACCGAAAAAAGTTTA
387 CCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTA
* * ** * *
6468878 AAAAATCCCAAATCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAATGAGTCGTCTTGCCGTG
452 AAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATG
* * *
6468943 AAACTTCACGTGAAGGCTAAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGGTATTGGCA
517 AAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCA
* * * * * *
6469008 CGTAGAAATATGACAG-TGTGCCTAAAACAACCTACCACCCTATCGATCCACGGCTTGCGTATCT
582 TGCAGAAATATGA-AGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* *
6469072 CGTTTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGGTTGGCTTAGG
646 CGTCTCTCTGGCCGGCGTAGT----GCCCGCCCG--C-C-CGCTCGTTTCGTCGG-TGGCTTAGG
* ** * * **
6469137 CATACGGAGTTCATTCCTAGTCTAAGATCAGACC-GAACTGAGGGTTGCGGCAGCAGGATTGGTA
702 CATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCAAGGGTTGCGGTAGCAGGATCGACA
* ** * * *
6469201 GCATGCAGAGGGGGACCCGATCGATCCCTGGCTTGCGCATCCCGCCCCTCTAGCCGGCTGAGCGC
766 GCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGC
* *
6469266 CCGTACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
831 CCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* **
6469321 GCATACGGAGTTCATTCCCAGTCTAAGATTGGATCGGACCGAGGGTTGTTGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGA-TGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
6469386 CTCGGGCGTGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATTGTCGGAGCATCGTCGGAGT
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * * *
6469451 ACCTGACAGGCGGCATTGGGGTTCCGATGATCGGAGGGGTGTGCGCACATTATGTGCGATGGGTG
130 ACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTGTGCGCACATGATGTGCGATGGGTG
* * *
6469516 CTGGTACTTGGCTCTTATATTGGCCCCTTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTA
195 CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTA
* * *
6469581 AAGAGCATTTGAGATTTTACAGGTTTGTTGCCAATAGCCATTAAAGTGTCTGATATGGGGACACT
260 AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
6469646 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
325 TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCA
* * *
6469711 AAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAACATTCTTCCAAAAAAATTTTAAA
390 ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-TCCTTCCGAAAAAATTTTAAA
* * * *
6469775 AAATCCCGAACCG-CAAAAGTTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGCCATTA
454 AAATCCCGAACCGTAAAAAG-TTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGA
* * * *
6469839 AAGTTCACGTGAAGGCTTAAGTGACAATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAC
518 AACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCAT
* * *
6469904 GTAGAAATATGAATATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGCATCCCG
583 GCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCG
* * *
6469969 TCTTTCTGGTCGGCGTAGTGCCCGCCCGCCAGCCCGCTCGTTTCGTCGGTTGGCTTTGGCATACG
648 TCTCTCTGGCCGGCGTAGTGCCCG--C-CC-GCCCGCTCGTTTCGTCGG-TGGCTTAGGCATACG
* * * * ** * *
6470034 AAGTTCATTCCCAATCGAAGAT-AGGACCAGACCTAGGGTTATGGCAGCAGGATCG-CAGCATGC
708 GAGTTCATTCCCAGTCTAAGATCA-GACCAGACCAAGGGTTGCGGTAGCAGGATCGACAGCACGC
* ** * * * * * * * *
6470097 AGTGGGGGACCCGAACGATACCCGGCTTGCGCGTCCCGCCCCTCTGACCGGTTAAGCGGCCACAC
772 AGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCAC
*
6470162 GCTCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
837 GCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
6470211 GCATACGGAGTTCGTTCCCAGTCTAAGATCGGACTGGATCAAGGGTTGTGGCAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
** **
6470276 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCACCGGAGA
65 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGA
* * * *
6470341 ACCTGACCAGTGGCATTGAGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACTTGATGTG
130 ACCTGACCGGCGGCATTGGGGTTCCGACGAT---------CGGGGGGGTGTGCGCACATGATGTG
* *
6470406 CAATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCGTATCCCTCATCAAACCTCGAGAACTCAC
186 CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* *
6470471 -CCCTCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTATCTGAAA
251 ACCC-CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
6470535 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCTAGTTTTTTGCTAAATTTTTTT
315 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* *
6470600 ATGCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
380 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * *
6470665 AATTTTAAAAAATCCCAAACC-TCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAAAGAGTTGTC
445 AATTTTAAAAAATCCCGAACCGT-AAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTC
* *
6470729 TTGCCATGAAAGTTCACGTGGAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
509 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * *
6470794 CATTGGCACT-CAAAAATATGAAGATGTGCCTAAAGCCACCTTCCACCCTATCGATCCACGGCTT
574 CATTGGCA-TGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * * * *
6470858 ACGCATCCCGTCTCTCTGGCCGGCGTAGTGCTCACCTGCCCACTCGCTCGTTTCATCAGTTGGCT
638 GCGCATCCCGTCTCTCTGGCCGGCGTAGTG--C-CC-GCCCGCCCGCTCGTTTCGTC-GGTGGCT
* * * * * * * *
6470923 TAGGCATACGGAATTCATTTCCAGTCTAAGATCGGATC-GAACCGAGGGTTACGGCAGCAAGATC
698 TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAG-ACCAAGGGTTGCGGTAGCAGGATC
*** * * ** * *
6470987 GGTTGCACGCAGAGGGGGACCCAGCCGATCCCCGACTTGCGCATCCCACCCCTCAGGCCGGTTGA
762 GACAGCACGCAGAGGGGGACCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGA
* * * *
6471052 GCGCTCGCACGCTCATTTTGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTAA
827 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * *
6471111 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACTGAGGGTTGCGGCACCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGAT-GGACCGGACCGAGGGTTGCGGCAGCACATGCTGGG
* * * *
6471176 CATC-AGCATATGCTGGTGCCGTATTTTTCTTCGTCGGGGCGCCA---T-----CA-C--CGGAG
65 C-TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
* *
6471229 AACTTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTCGAGGGGGGTGTGTACACATGATG
129 AACCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGT--------GTGCG--CACATGATG
* * * *
6471294 TGCGATGGGTGCCGATACTTGGCCATTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAACTC
184 TGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
6471359 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAA
249 ACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAA
** * * *
6471424 ATGGGGACACTTTTTTCAAATGACCACAAAATCTTGTACACTTTGAGGTTTTAGCTGAATTTCTT
314 ATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTT
* * * *
6471489 TGTACATGCCAACAAAAATAAAAGGATCACATCTACCAAGTTTGGGGCCAAAACACCTTCCGAAA
379 TGTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAA
* * *
6471554 AAATTTTAAAAAATCCCGTATCGTAAAAACTTTCAAA
444 AAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAA
6471591 TGGTCGACGT
Statistics
Matches: 15115, Mismatches: 2353, Indels: 1725
0.79 0.12 0.09
Matches are distributed among these distances:
855 3 0.00
856 173 0.01
857 17 0.00
858 20 0.00
859 12 0.00
860 24 0.00
861 50 0.00
862 9 0.00
863 59 0.00
864 65 0.00
865 44 0.00
866 10 0.00
867 298 0.02
868 606 0.04
869 481 0.03
870 93 0.01
871 142 0.01
872 14 0.00
873 27 0.00
874 25 0.00
875 479 0.03
876 224 0.01
877 326 0.02
878 312 0.02
879 306 0.02
880 343 0.02
881 731 0.05
882 248 0.02
883 39 0.00
884 725 0.05
885 266 0.02
886 148 0.01
887 273 0.02
888 44 0.00
889 482 0.03
890 758 0.05
891 557 0.04
892 631 0.04
893 859 0.06
894 442 0.03
895 1095 0.07
896 29 0.00
897 22 0.00
898 20 0.00
899 776 0.05
900 742 0.05
901 307 0.02
902 69 0.00
903 5 0.00
904 6 0.00
905 61 0.00
906 183 0.01
907 17 0.00
908 45 0.00
909 15 0.00
910 13 0.00
911 31 0.00
912 14 0.00
913 343 0.02
914 258 0.02
915 8 0.00
916 12 0.00
917 23 0.00
918 16 0.00
919 25 0.00
920 14 0.00
921 7 0.00
922 28 0.00
923 8 0.00
924 5 0.00
925 2 0.00
926 12 0.00
927 12 0.00
928 6 0.00
929 8 0.00
930 2 0.00
933 1 0.00
934 5 0.00
935 5 0.00
936 3 0.00
937 5 0.00
939 5 0.00
940 2 0.00
941 3 0.00
942 5 0.00
943 1 0.00
946 4 0.00
947 8 0.00
948 7 0.00
949 10 0.00
950 12 0.00
951 2 0.00
952 5 0.00
953 6 0.00
954 18 0.00
955 4 0.00
956 9 0.00
957 24 0.00
958 18 0.00
959 21 0.00
960 8 0.00
961 5 0.00
962 6 0.00
963 1 0.00
965 16 0.00
966 10 0.00
967 7 0.00
968 2 0.00
969 1 0.00
970 10 0.00
971 1 0.00
972 1 0.00
973 1 0.00
975 2 0.00
976 3 0.00
977 2 0.00
978 5 0.00
979 1 0.00
980 3 0.00
981 2 0.00
982 8 0.00
983 13 0.00
984 5 0.00
985 2 0.00
986 1 0.00
987 2 0.00
988 2 0.00
989 9 0.00
990 2 0.00
991 6 0.00
992 9 0.00
993 9 0.00
994 1 0.00
995 9 0.00
996 2 0.00
997 8 0.00
998 15 0.00
1000 3 0.00
1001 10 0.00
1002 6 0.00
1003 3 0.00
1004 9 0.00
1005 8 0.00
1006 1 0.00
1007 3 0.00
1008 6 0.00
1009 10 0.00
1010 6 0.00
1011 4 0.00
1012 9 0.00
1013 3 0.00
1014 7 0.00
1015 6 0.00
1016 13 0.00
1017 11 0.00
1018 7 0.00
1019 6 0.00
1020 5 0.00
1021 2 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (885 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATGGACCGGACCGAGGGTTGCGGCAGCACATGCTGGGC
TCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAGAA
CCTGACCGGCGGCATTGGGGTTCCGACGATCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGC
TGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAA
AGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTT
TTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCATGCCAA
CAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAA
ATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAAC
TTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCA
GAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCT
CTCTGGCCGGCGTAGTGCCCGCCCGCCCGCTCGTTTCGTCGGTGGCTTAGGCATACGGAGTTCAT
TCCCAGTCTAAGATCAGACCAGACCAAGGGTTGCGGTAGCAGGATCGACAGCACGCAGAGGGGGA
CCCGGCCGATCCCCGGCTTGCGCATCCTGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTC
GTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:6462153 original size:26 final size:26
Alignment explanation
Indices: 6462117--6462169 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6462107 GTTGACTTAG
*
6462117 GCATACAGAGTTAATTCCCAGTCTAA
1 GCATACAGAGTTAATTCCAAGTCTAA
* *
6462143 GCATTCAGAGTTCATTCCAAGTCTAA
1 GCATACAGAGTTAATTCCAAGTCTAA
6462169 G
1 G
6462170 ATCGGACTGG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.32, C:0.23, G:0.17, T:0.28
Consensus pattern (26 bp):
GCATACAGAGTTAATTCCAAGTCTAA
Found at i:6466540 original size:889 final size:884
Alignment explanation
Indices: 6463886--6471590 Score: 4207
Period size: 890 Copynumber: 8.5 Consensus size: 884
6463876 GTTGACTTAG
* * * * * *
6463886 GCATACGGAGTTCATACCCAGTCTAAGATCG-GACCGGACTGAGGGTCGT-GGCAGCACATGCTG
1 GCATACGGAGTTCATTCCAAGCCTAAGATCGAGACCAGACCGAGGGT--TACGCAGCACATGCTG
** * ** *
6463949 GGCTCGGGCATGTGCTGGTGCCACATTTTTGTTTTTCGCGGCACCA---TC--G---C--CGGAG
64 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGGGCATCGTCGGAG
* * * * **
6464004 AACTTGACCGACGGCATTGGGGTTCCAGCGATCGGGGGGGCCCGGGGGGGTTGTGCGCACATAAT
129 AACCTGACCGACGGCATTGGGGTTCCGGAGATCGGGGGGGCCGGGGGGGGTT-CACGCAC--AA-
* * **
6464069 GTGCGATGGGTGCTGGTACCTGGCCCTCATATTGGCCCCCTATCCCTCATCAAACAGCAAGAACT
190 GT--GA----TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACT
*
6464134 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCCGA
249 CACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
*
6464199 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACCTCGAGTTTTTAGCTGAATTTTT
314 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * * *
6464264 TTTTGCTTGCCAACAAAAATACAAGGATCTCGTCTACCAAGGTTGGGACCAAAACTCCTTCCAAA
379 TTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAA
* **
6464329 GAAATTTT-AAAAATCCTGAACCGTAAAAAGTTTCAAAAATTGTGAAAAATAAAAAACGAGTCGT
444 GAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGT
* *
6464393 CTTGCCATGAAACTTCACGTGAAGGTTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATG
509 CTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATG
* * * *
6464458 GCATGGGCATGCAGAAATATGAAGATGTCCCTAATCCCACTTACCACCCTATCGATCCACGGCTT
574 GCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTT
* * * ** *
6464523 GTGCATCCCATCTCTCTGGCTAGCGTAGTGCCAGCCCG-CTCGTTTCGTCGGTTCGCTTAGGCAT
639 GCGTATCCCGTCTCTCTGGCCGGCGTAGTGCCAGCCCGTCTCGTTTCGTCGGTTGGCTTAGGCAT
* *
6464587 ACAGAATTCATTCCCAGTCTAAGATC-AGACCGGACCGAGGGTTACGGTAGCAGGATCGACAGCA
704 ACGGAATTCATTCCCAGTCTAAGATCGA-ACCGGACCGAGGGTTACGGCAGCAGGATCGACAGCA
* ** ** *
6464651 CACA-ACGGGGGACCCAATCGATCCCTAGCTTGCACATCCCGCCCC-CTTGGCCGGCTGAGCGCC
768 CGCAGA-GGGGGACCCGGTCGATCCCCGGCTTGCACATCTCGCCCCTC-TGGCCGGCTGAGCGCC
* * * *
6464714 CGCACGCTCGTTCCGTGGGTTCACTTAGGCATACGGAGTTCACTCCCAATCTAA
831 CGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
* * * * * *
6464768 GCATGCAGAGTTCGTTCTC-AGTCTAAGATTG-GACCAGACCGAGGGTTGCGGCAGCACATGCTG
1 GCATACGGAGTTCATTC-CAAGCCTAAGATCGAGACCAGACCGAGGGTTAC-GCAGCACATGCTG
* *
6464831 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTC-ACTGAGGCACCTTCGTCGGTGCATCGTCGG
64 GGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTC-GAGGCACCATCGTCGG-GCATCGTCGG
* * * * * *
6464895 AGAACCTAACCGGCGGCATTGGGGTTCCGGTGATCGGGGGGGCCAGGGGTGGTAT-GCGCACAAG
127 AGAACCTGACCGACGGCATTGGGGTTCCGGAGATCGGGGGGGCCGGGGGGGGT-TCACGCAC-A-
6464959 ATGTGCAATGAGGGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAA
189 A-GTG--AT----GCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAA
* *
6465024 CTCACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTACCAGTAGCCATTAAAGTGTCT
247 CTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCT
* * * * * * *
6465089 AAAATGAGGACAGTTTTTTCAAATGGTCACAAAATATTGTAGACTTTGAGTTTCTAGCTGAAATT
312 GAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTG-AATT
* * * * *
6465154 TTTTT-TGCATGCAAAAAAAAATACAAGGATTACGTCTACTAAGTTTGGGGCCAAAACTCTTTCC
376 TTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * * *
6465218 GAAGAAATTTTAAAAAATCCCAAACCGTAAAAAGTTTCAAAAATCATGAAAAATAGAATACGAGT
441 AAAGAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGT
* *
6465283 CGTCTTGCCATGAAACTTCACGTGAAGGATTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
506 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAA
* * *
6465348 ATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAA-CACACCTACTACCCTATCAATCCACG
571 ATGGCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCA-ACCTACCACCCTATCGATCCACG
6465412 GCTTGCGTATCCCGTCTCTCTGGCCGGCGTAGTGCCAGCCCGT-TCGTTTCGTCGGTTGGCTTAG
635 GCTTGCGTATCCCGTCTCTCTGGCCGGCGTAGTGCCAGCCCGTCTCGTTTCGTCGGTTGGCTTAG
* * ** * *
6465476 GCATACGGAATTCATTCCCAGTCTAAGATTGGACCATACCAAGGGTTACGACAGCAGGATCGACA
700 GCATACGGAATTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTACGGCAGCAGGATCGACA
* * * * * *
6465541 GCACGCAGTA-GGGGACCCGGCCGATCCCCGGGTTGTGCAC-CCT-GCCCCTTTGGCCAGCTGAA
765 GCACGCAG-AGGGGGACCCGGTCGATCCCC-GGCT-TGCACATCTCGCCCCTCTGGCCGGCTGAG
* *
6465603 CGCCCACACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAATCTAA
827 CGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
* * * ** * *
6465661 GCATATGGAGTTCATTCCAAGCCTAAGATCGAGGCCGGATTGAGGGTTACGATAGCACATGCTAG
1 GCATACGGAGTTCATTCCAAGCCTAAGATCGAGACCAGACCGAGGGTTACG-CAGCACATGCTGG
*
6465726 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGGGGCACCATCGTCGGAGCATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGG-GCATCGTCGGAG
* *
6465791 AACCTGACCGACGGCATTGGGGTTCCGGAGATCGAGGGGGCCGGGGGGGGTTCTCGCAC-A-TGA
129 AACCTGACCGACGGCATTGGGGTTCCGGAGATCGGGGGGGCCGGGGGGGGTTCACGCACAAGTGA
* * **
6465854 TG-TGGTACTTGGCCTTTATATTGGCCCCCTATCCCTTATCAAACCTTGAGAACTCACACCCCCT
194 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCT
* * *
6465918 TAAAAAGCAATTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAACTGTCTGAAATGGGGACA
259 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * * * *
6465983 CTTTTTTCAAATGGTCGCAAAATCTTCTACACTTAGGGTTTTTACCTGAATTTTTTTATGCATGC
324 CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGC
*
6466048 CAA-AAAAATACAAGGATCACGTCTACCAAGTTTTGGGCCAAAACTCCTTCCAAAGAAATTTTAA
389 CAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAGAAATTTTAA
** ** * *
6466112 AAAATCCCGAACCACAAAAAGTTTTGAAAATCAAGAAAAATAAAAAATGAGTCGTCTTGCCATGA
454 AAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTTGCCATGA
* * *
6466177 AACTTCACGTGAAGGCTTAAAGGACCACTGTATGAATTTACAAGCCATAGAAATGGCATTGGCAT
519 AACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATGGGCAT
* * *
6466242 GTAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTACGTATCCCC
584 GCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTGCGTATCCCG
* * *
6466307 TCTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGTCCACTCATTTCGTCGGTTGGCTTAGGCATACG
649 TCTCTCTGGCCGGCGTAGT----GCCAGCCCGT---CTCGTTTCGTCGGTTGGCTTAGGCATACG
* * * ** *
6466372 GAGTTCATTCCTAGTCTAAGATCGAACCGGATCGAGGGTTGTGGCAGCAGGATCGACAGCACGTA
707 GAATTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTACGGCAGCAGGATCGACAGCACGCA
*
6466437 GAGGGGGACCCGGTCGATCCCCGGCTTGCACATCTCGCCCCTCTGGCCGGTTGAGCGCCCGCACG
772 GAGGGGGACCCGGTCGATCCCCGGCTTGCACATCTCGCCCCTCTGGCCGGCTGAGCGCCCGCACG
*
6466502 CTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
837 CTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
* * * * *
6466550 GCATACGAAGTTCATTCCCAA-CCTAAGATC-AGATCAGACCAAAGGTTGAAGCAGCCACATGCT
1 GCATACGGAGTTCATT-CCAAGCCTAAGATCGAGACCAGACCGAGGGTT-ACGCAG-CACATGCT
* * *
6466613 GGGCTCAGGCATGTGCAGGTGCCGCATTTTTCTTCGTCGAGG---CA----C---CATCGTCGGA
63 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGGGCATCGTCGGA
* *
6466668 GAACCTGACCGACGGCATTGGGGTTCC-GACGATCGGGGGGGCCGGGGGAGGTGTGCACACACGA
128 GAACCTGACCGACGGCATTGGGGTTCCGGA-GATCGGGGGGGCCGGGGG-GG-GTTCACGCAC-A
* * * *
6466732 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCTCCCTATCCCTCATCAGACCTCGAGAAC
189 AGT--GA----TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAAC
6466797 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
248 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
*
6466862 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGTTGAATTTT
313 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
** * * * **
6466927 TTTATGCATGCCAACAAAAATACAAGGATCATATTTATCAAGTTTGGGGCCAAAAATCCTTCTGT
378 TTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTC-CA
* * * *
6466992 AA-AAATTTTGAAAAATCCCGAACTGTAAAAAGTTTCAAAAATTATGGAAAATAAAAAACGAGTC
442 AAGAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTC
*
6467056 GTCTTGCCATTAAACTTCACGTGAAGGCTT-AAGCGACCATTGTATGAATTTACAAGCCATAAAA
507 GTCTTGCCATGAAACTTCACGTGAAGGCTTAAAG-GACCATTGTATGAATTTACAAGCCATAAAA
** * *
6467120 ATACCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCACGG
571 ATGGCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGG
* * * * * * ** * *
6467185 CTTGCGCT-TCTCGACTCTCTGGCCGCCGTAGTACCCGCCCG-C-C--TAC--CCATGGGCATGC
636 CTTGCG-TATCCCGTCTCTCTGGCCGGCGTAGTGCCAGCCCGTCTCGTTTCGTCGGTTGGC-T-T
** * * ** * ** * ** * * * **
6467243 AGAAATATGAAGATGTGCCTAAACCCA-CCTACCACCCTATC-GATCC-ACGGCTTGC-GCTTCC
698 AGGCATACGGA-AT-T--C-ATTCCCAGTCTAAGATCGAACCGGA-CCGA-GGGTTACGGC-AGC
* ** **** * ** * ** * * * ** ***
6467304 CGTCTCTTTGGC-CG--GCGTAGTACCCGCCCG-CCCACCCGCTCGTTTCATCT-GTTGGCT-TA
755 AGGATCGACAGCACGCAGAGGGGGACCCGGTCGATCC-CCGGCTTG-CACATCTCG-CCCCTCT-
* *** * ** * ** * * *
6467363 GACATACGGAGTTCATTCC-CA-GTCTAAGATCG-GACCGGACTGAGGGTTGTGGCAATA-GGA-
816 GGCCGGCTGAG--C-GCCCGCACG-CTCATTTCGTG---GG-TTGA--CTT-AGGC-ATACGGAG
** ** *
6467423 -TCGGTAGCACT-TAGA
869 TTCATTCCCAATCTA-A
*** * * ** * ** ** ** ** * **
6467438 GGGGGACCCGA-TTGA-TCACCGGCTTGCGCATCCTG-CC---CCTCTGGCCTGCTG-AGCACCC
1 -GCATA-CGGAGTTCATTC-CAAGCCTAAG-ATCGAGACCAGACC-GAGGGTTAC-GCAGCACAT
** ** * * * * * * *
6467496 G-TACGCTCGTTTCATGGGTTGACTTAGGCATACAGAATTCATTTC--CAGTCTACGCA-TACCG
60 GCTGGGCTCG-GGCAT--G-TG-C-T-GG--TGCCGTATT--TTTCTTC-GTCGAGGCACCATCG
* ** ** * * * * * ** * * *** ** **
6467557 -AGTTCAT--TCCCAG--TCT-A-AGATTGG-A-TCGGGCTGAGG-G-TTGCGATAGCACATGCT
113 TCGGGCATCGTCGGAGAACCTGACCGA-CGGCATTGGGGTTCCGGAGATCGGGGGGGC-CGGGGG
* ** * ** * * ** * ** * *
6467611 GGG--CTCGGGC-A-TG-TGCTGGTGC-T-GCATTTTTCTTCGTCAGGGCACTATCGTTGGAGCA
176 GGGTTCACGCACAAGTGATGCTGGTACTTGGCCCTTATATT-G---GCCCCCTATCCCT-CATCA
* ** * ** * ** * ** ******** *
6467669 TCACC-GGAGAACCTGACCGACGGCATTAGGGTTTCGGCGATCGGAGGGGCCGGGGGGTGTGC-G
236 -AACCTCAAGAA-CTCA-C-ACCCCCTTAAAG----AGC-ATTTGA-GATTTTACAGGTTTGCTG
* * **** * * ** * **
6467732 CACAGGATGTACGATGGGTGTTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCT
291 C-CAGTA-G--CCATTAAAG-T-GT-C-T-G-----AAATGGGGACACT-T---TTTTCAAA--T
* **** ** * ** ** * *
6467797 CAAGAACTCACACCCCCTTAAACAACATTCGAGATTTTA-C--AGGTTTGCTA-CCAGTAGCCAT
336 ---G--GTCACAAAATCTTGTAC-AC-TTCGAGTTTTTAGCTGAATTTTTTTATGCA-T-GCCAA
* ** * * * ** * * * *** *
6467858 TAAAGTGTCAGAAATGGGGA-CACTTTTTTCAA--AT-GGTCACAAAA-TCTTGTACACTTTGAG
392 CAAA-AAT-A-CAA---GGATCACGTCTACCAAGTTTGGGGC-CAAAACTCCT-T-C-CAAAGAA
* * *** ** * * ** * ** * ** ** *
6467918 TTTTTAGCTGAAATATTTTGTGCATGCCAACAAAAATACAAGGATCACG---TCT-ACCAA-G-T
447 ATTTTA----AAAAATCCCGAAC-CG-TAA-AAAGTTTCAAAAATCATGAAAAATAAAAAACGAG
* * *** *** ** ** ** *
6467977 TTG-C-GGCCA--AAACTCCTTC-CAAAAAAATTTTAAAAAATCCTGAACCGTAAAAAGTTTCAA
505 TCGTCTTGCCATGAAA---CTTCAC-GTGAAGGCTTAAAGGA-CC---ATTGTATGAA-TTT-AC
** * * *** * *
6468037 AAATCATGAAAAATAGAAAACGAGTCGTTTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
560 AAGCCAT-AAAAAT-G---GC-A-TGGGCATG-CA-GAAA--T-A--TGAA-G---ATGTG-CC-
** ** * * * *** * * ** *** * *
6468102 TTGTATGAACTTACAAGCCATAAAAATGGCATTGGCAGGCAGAAATATGAAGATGTAC-CTAAAG
605 -TAAACCAACCTACCA-CCCTATCGAT-CCA-CGGCTTGC-G---TATCCCG-TCT-CTCT--GG
* * * * ** * * *
6468166 CC-ACCTA---CCA-CCC-TATCG-ATCCACGGCTTGCGCATCTCGTC-TCTCTGGCCAATGT-A
658 CCGGCGTAGTGCCAGCCCGTCTCGTTTCGTCGG-TTG-GC-T-TAGGCAT-AC-GG--AAT-TCA
* * *** * ** * *** *
6468222 GTGCCC-GCCCGCCCGCCTGCGCGCTTGTTTCGTCAGTTGGCTTA-GGC-GTATGGAGTTC-ATT
714 -TTCCCAG-TC-TAAG-AT-CGAAC-CGGACCG--AG--GG-TTACGGCAGCA-GGA--TCGA--
* *** * * ** * * * * * * ******
6468283 CCCAGTCTAAGATCAGA-CTAGACCAAGGGTTGCGGTAGCAGGATCG-GCAGCACGCAGAGGGGG
763 --CAG-C-ACG--CAGAGGGGGACC--CGG-T-CGATCCCCGGCTTGCACATCTCGCCCCTCTGG
* * * * ** ***** * *
6468346 ACCCGATCGATC-CTCGGCTTACG--CATCACACCCCTCT-AGCTGGCTGAGCGC-T-CGCACGC
818 -CCGGCT-GAGCGC-CCGC--ACGCTCATTTCGTGGGT-TGA-CT---T-AG-GCATACGGA-GT
* **** *
6468405 TCGTTTCGTGGGTTGACTTAG
870 TC-ATTC--CCAAT--C-TAA
* * * * ** ** **
6468426 GCAGATGGAGTTCATTCCCAGTCTAAGCATACGA-A-GTGACCGAGGGTTGTGGTGGCACATGCT
1 GCATACGGAGTTCATTCCAAGCCTAAG-AT-CGAGACCAGACCGAGGGTT-ACGCAGCACATGCT
* * **
6468489 GGGCTCGGGCATGTGCTGGTGCTGTATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCG-CTG
63 GGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGG-GCATCGTC-G
** * * * * * * * **** * * ** *
6468553 GAGAACCTGACCGATTGAATTGGGGTTCTGGCGAT-TGGGGGG-TGTGCGCACATGATGTGCGA-
126 GAGAACCTGACCGACGGCATTGGGGTTCCGGAGATCGGGGGGGCCGGGGGGGGTTCACGCACAAG
* * * * *
6468615 TGGGTGCTGGTACTTGGCTCTTATATTGGCCCCCTATCCCTCATCAAACTTCGAGAACTCACATC
191 T-GATGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACC
* * *
6468680 CCCTTAAAGAGCTTTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAATGTCTGAAATTGG
255 CCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGG
* * *
6468745 GACACTTTTTTCAAACGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGT
320 GACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGC
* * * * *
6468810 AGGCCAACAAAAATACAGGGATCACGTCTACCAAGTTTGGGGCCAAAAATCCTACCGAAA-AAAG
385 ATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-AAAGAAAT
* * ** * *
6468874 TTTAAAAAATCCCAAATCGTAAAAAGTTTTGAAAATCATGAAAAATAGAAAATGAGTCGTCTTGC
449 TTTAAAAAATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTTGC
* * *
6468939 CGTGAAACTTCACGTGAAGGC-TAAAGGGACCATTGTATGAATTTACAAGTCATAAAAATGGTAT
514 CATGAAACTTCACGTGAAGGCTTAAA-GGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * *
6469003 TGGCACGTAGAAATATGACAG-TGTGCCTAAAACAACCTACCACCCTATCGATCCACGGCTTGCG
578 GGGCATGCAGAAATATGA-AGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTGCG
* * * *
6469067 TATCTCGTTTCTCTGGTCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCGTCGGTTGGC
642 TATCCCGTCTCTCTGGCCGGCGTAGT--------GCCAGCCCG-T--CTCGTTTCGTCGGTTGGC
* * * * *
6469132 TTAGGCATACGGAGTTCATTCCTAGTCTAAGATC-AGACCGAACTGAGGGTTGCGGCAGCAGGAT
696 TTAGGCATACGGAATTCATTCCCAGTCTAAGATCGA-ACCGGACCGAGGGTTACGGCAGCAGGAT
* ** * * * * * *
6469196 TGGTAGCATGCAGAGGGGGACCCGATCGATCCCTGGCTTGCGCATCCCGCCCCTCTAGCCGGCTG
760 CGACAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCACATCTCGCCCCTCTGGCCGGCTG
* * * *
6469261 AGCGCCCGTACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
825 AGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
* * * * * **
6469321 GCATACGGAGTTCATTCCCAGTCTAAGATTG-GATCGGACCGAGGGTTGTTGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCAAGCCTAAGATCGAGACCAGACCGAGGGTT-ACGCAGCACATGCTGG
* ** * *
6469385 GCTCGGGCGTGTGCTGGTGCCACATTTTTCTTCGTCGGGGCACCATTGTCGGAGCATCGTCGGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGG-GCATCGTCGGAG
* * * * * * **** * ** *
6469450 TACCTGACAGGCGGCATTGGGGTTCC-GATGATCGGAGGGG-TGTGCGCACATT-ATGTGCGA-T
129 AACCTGACCGACGGCATTGGGGTTCCGGA-GATCGGGGGGGCCG-GGGGGGGTTCACGCACAAGT
* * *
6469511 GGGTGCTGGTACTTGGCTCTTATATTGGCCCCTTATCCCTCATCAAACCTCAAGAACTCACACCC
192 -GATGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCC
* * *
6469576 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGTTGCCAATAGCCATTAAAGTGTCTGATATGGGG
256 CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGG
*
6469641 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTGTGCA
321 ACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCA
* * *
6469706 TGCCAAAAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCC-AAACATTCTTCCAAAAAAATT
386 TGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAAC-TCCTTCCAAAGAAATT
* *
6469770 TTAAAAAATCCCGAACCG-CAAAAGTTTTCAAAAATCGTGAAAAATAAAAAACGAGTCGTCTTGC
450 TTAAAAAATCCCGAACCGTAAAAAG-TTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTTGC
* * *
6469834 CATTAAAGTTCACGTGAAGGCTT-AAGTGACAATTGTATGAATTTACAAGCCATAAAAATGGCAT
514 CATGAAACTTCACGTGAAGGCTTAAAG-GACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
* * * * * * *
6469898 TGGCACGTAGAAATATGAATATGTGCCTAAACCCACCTACCACCCTATCGATCCATGGCTTGCGC
578 GGGCATGCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTGCGT
* * *
6469963 ATCCCGTCTTTCTGGTCGGCGTAGTGCCCGCCCGCCAGCCCG-CTCGTTTCGTCGGTTGGCTTTG
643 ATCCCGTCTCTCTGGCCGGCGTAGT--------GCCAGCCCGTCTCGTTTCGTCGGTTGGCTTAG
* * * * * * *
6470027 GCATAC-GAAGTTCATTCCCAATCGAAGATAGGACCAGACCTAGGGTTATGGCAGCAGGATCG-C
700 GCATACGGAA-TTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTACGGCAGCAGGATCGAC
* * ** * * * * * * *
6470090 AGCATGCAGTGGGGGACCCGAACGATACCCGGCTTGCGCGTCCCGCCCCTCTGACCGGTTAAGCG
764 AGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCACATCTCGCCCCTCTGGCCGGCTGAGCG
* * * * *
6470155 GCCACACGCTCGTTTCGTTGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
829 CCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
* * * ** * * **
6470211 GCATACGGAGTTCGTTCCCAGTCTAAGATCG-GACTGGATCAAGGGTTGTGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCAAGCCTAAGATCGAGACCAGACCGAGGGTT-ACGCAGCACATGCTGG
* * ** **
6470275 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCGTCGGGGCACCATCACCGGAGCATCACCGGAG
65 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGG-GCATCGTCGGAG
* * *
6470340 AACCTGACC-AGTGGCATTGAGGTTCC-GACGATCGGGGGGGCCGGGGGGGTGTGCGCACTTG-A
129 AACCTGACCGA-CGGCATTGGGGTTCCGGA-GATCGGGGGGGCCGGGGGGG-GT--TCAC--GCA
* * *
6470402 TGTGCAA-TGGGTGCTGGTACTTGGCCCTTATATTGGCCCCGTATCCCTCATCAAACCTCGAGAA
187 ----CAAGT-GATGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAA
* *
6470466 CTCAC-CCCTCCTTAAAGAGCATTTGAGATTTTACAAGTTTGCTGCCAGTAGCCATTAAAGTATC
247 CTCACACCC-CCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTC
* * *
6470530 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCTAGTTTTTTGCTAAATT
311 TGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATT
*
6470595 TTTTTATGCATACCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
376 TTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC
* * *
6470660 GAAA-AAATTTTAAAAAATCCCAAACC-TCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAAA-G
441 -AAAGAAATTTTAAAAAATCCCGAACCGT-AAAAAGTTTCAAAAATCATGAAAAATA-AAAAACG
* * * *
6470722 AGTTGTCTTGCCATGAAAGTTCACGTGGAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATA
503 AGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATA
* * *
6470787 AAAATGGCATTGGCACT-CAAAAATATGAAGATGTGCCTAAAGCC-ACCTTCCACCCTATCGATC
568 AAAATGGCATGGGCA-TGCAGAAATATGAAGATGTGCCTAAA-CCAACCTACCACCCTATCGATC
* * * *
6470850 CACGGCTTACGCATCCCGTCTCTCTGGCCGGCGTAGTGCTCACCTGCCCACTCGCTCGTTTCATC
631 CACGGCTTGCGTATCCCGTCTCTCTGGCCGGCGTAGTGC-CA---GCCC-GT--CTCGTTTCGTC
* * * * *
6470915 AGTTGGCTTAGGCATACGGAATTCATTTCCAGTCTAAGATCGGATCGAACCGAGGGTTACGGCAG
689 GGTTGGCTTAGGCATACGGAATTCATTCCCAGTCTAAGATCGAACCGGACCGAGGGTTACGGCAG
* *** * * * * * * *
6470980 CAAGATCGGTTGCACGCAGAGGGGGACCCAGCCGATCCCCGACTTGCGCATCCCACCCCTCAGGC
754 CAGGATCGACAGCACGCAGAGGGGGACCCGGTCGATCCCCGGCTTGCACATCTCGCCCCTCTGGC
* * * * *
6471045 CGGTTGAGCGCTCGCACGCTCATTTTGTGGGTTGACTTAGGCATACAGAGTTCATTCCCAGTCTA
819 CGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTA
6471110 A
884 A
* * * * *
6471111 GCATACGGAGTTCATTCCCAGTCTAAGATCG-GACCAGACTGAGGGTTGCGGCACCACATGCTGG
1 GCATACGGAGTTCATTCCAAGCCTAAGATCGAGACCAGACCGAGGGTTAC-GCAGCACATGCTGG
* * * *
6471175 GCATC-AGCATATGCTGGTGCCGTATTTTTCTTCGTCGGGGCGCCA---T----CA-C--CGGAG
65 GC-TCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGGGCATCGTCGGAG
* * * * *
6471229 AACTTGACCGGCGGCATTGGGGTTCC-GACGATCGGGGGGGTCGAGGGGGGTGTGT-ACACATGA
129 AACCTGACCGACGGCATTGGGGTTCCGGA-GATCGGGGGGGCCG-GGGGGG-GT-TCACGCA-CA
* * * **
6471292 TGTGCGATGGGTGCCGATACTTGGCCATTATATTGGCCCCCTATCCCTCATCAAACCTTGAGAAC
189 AGT--GAT-GCTG--G-TACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAAC
*
6471357 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTA
248 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
** * * *
6471422 AAATGGGGACACTTTTTTCAAATGACCACAAAATCTTGTACACTTTGAGGTTTTAGCTGAATTTC
313 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTT
* * * * *
6471487 TTTGTACATGCCAACAAAAATAAAAGGATCACATCTACCAAGTTTGGGGCCAAAACACCTTCCGA
378 TTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCC-A
* * *
6471552 AA-AAATTTTAAAAAATCCCGTATCGTAAAAACTTTCAAA
442 AAGAAATTTTAAAAAATCCCGAACCGTAAAAAGTTTCAAA
6471591 TGGTCGACGT
Statistics
Matches: 5209, Mismatches: 1160, Indels: 900
0.72 0.16 0.12
Matches are distributed among these distances:
877 2 0.00
878 59 0.01
879 10 0.00
880 21 0.00
881 285 0.05
882 268 0.05
883 21 0.00
884 38 0.01
885 31 0.01
886 15 0.00
887 36 0.01
888 36 0.01
889 298 0.06
890 720 0.14
891 320 0.06
892 250 0.05
893 465 0.09
894 271 0.05
895 495 0.10
896 17 0.00
897 6 0.00
898 9 0.00
899 485 0.09
900 223 0.04
901 13 0.00
902 4 0.00
903 3 0.00
904 3 0.00
905 3 0.00
906 19 0.00
907 14 0.00
908 9 0.00
909 1 0.00
910 10 0.00
911 4 0.00
912 3 0.00
913 1 0.00
914 2 0.00
915 3 0.00
916 7 0.00
917 20 0.00
918 9 0.00
919 33 0.01
920 15 0.00
921 9 0.00
922 24 0.00
923 12 0.00
924 8 0.00
925 6 0.00
926 21 0.00
927 19 0.00
928 12 0.00
929 21 0.00
930 7 0.00
931 4 0.00
932 3 0.00
933 3 0.00
934 11 0.00
935 10 0.00
936 3 0.00
937 5 0.00
939 5 0.00
940 2 0.00
941 3 0.00
942 5 0.00
943 1 0.00
946 4 0.00
947 18 0.00
948 9 0.00
949 11 0.00
950 18 0.00
951 4 0.00
952 6 0.00
953 12 0.00
954 25 0.00
955 9 0.00
956 10 0.00
957 24 0.00
958 10 0.00
959 26 0.00
960 12 0.00
961 4 0.00
962 4 0.00
963 2 0.00
964 1 0.00
966 7 0.00
967 1 0.00
968 2 0.00
969 5 0.00
970 11 0.00
973 1 0.00
974 1 0.00
975 1 0.00
976 2 0.00
977 3 0.00
978 3 0.00
979 8 0.00
980 12 0.00
981 18 0.00
982 14 0.00
983 23 0.00
984 11 0.00
985 6 0.00
986 5 0.00
987 16 0.00
988 6 0.00
989 15 0.00
990 17 0.00
991 18 0.00
992 14 0.00
993 11 0.00
994 1 0.00
995 8 0.00
996 2 0.00
997 7 0.00
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.26
Consensus pattern (884 bp):
GCATACGGAGTTCATTCCAAGCCTAAGATCGAGACCAGACCGAGGGTTACGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGTCGAGGCACCATCGTCGGGCATCGTCGGAGAA
CCTGACCGACGGCATTGGGGTTCCGGAGATCGGGGGGGCCGGGGGGGGTTCACGCACAAGTGATG
CTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTA
AAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACT
TTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCA
ACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCAAAGAAATTTTAAAA
AATCCCGAACCGTAAAAAGTTTCAAAAATCATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAA
CTTCACGTGAAGGCTTAAAGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATGGGCATGC
AGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTGCGTATCCCGTC
TCTCTGGCCGGCGTAGTGCCAGCCCGTCTCGTTTCGTCGGTTGGCTTAGGCATACGGAATTCATT
CCCAGTCTAAGATCGAACCGGACCGAGGGTTACGGCAGCAGGATCGACAGCACGCAGAGGGGGAC
CCGGTCGATCCCCGGCTTGCACATCTCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCATTTCG
TGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
Found at i:6466575 original size:26 final size:26
Alignment explanation
Indices: 6466524--6466576 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
6466514 GTTGACTTAG
* **
6466524 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGAAGTTCATTCCCAACCTAA
6466550 GCATACGAAGTTCATTCCCAACCTAA
1 GCATACGAAGTTCATTCCCAACCTAA
6466576 G
1 G
6466577 ATCAGATCAG
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.28, G:0.17, T:0.25
Consensus pattern (26 bp):
GCATACGAAGTTCATTCCCAACCTAA
Found at i:6467316 original size:108 final size:108
Alignment explanation
Indices: 6467123--6467340 Score: 382
Period size: 108 Copynumber: 2.0 Consensus size: 108
6467113 CATAAAAATA
*
6467123 CCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTATCACCCTATCGATCCACGGCTT
1 CCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* *
6467188 GCGCTTCTCGACTCTCTGGCCGCCGTAGTACCCGCCCGCCTAC
66 GCGCTTCCCGACTCTCTGGCCGCCGTAGTACCCGCCCGCCCAC
6467231 CCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
1 CCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
* * *
6467296 GCGCTTCCCGTCTCTTTGGCCGGCGTAGTACCCGCCCGCCCAC
66 GCGCTTCCCGACTCTCTGGCCGCCGTAGTACCCGCCCGCCCAC
6467339 CC
1 CC
6467341 GCTCGTTTCA
Statistics
Matches: 104, Mismatches: 6, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
108 104 1.00
ACGTcount: A:0.21, C:0.38, G:0.21, T:0.21
Consensus pattern (108 bp):
CCATGGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTT
GCGCTTCCCGACTCTCTGGCCGCCGTAGTACCCGCCCGCCCAC
Found at i:6467553 original size:26 final size:26
Alignment explanation
Indices: 6467523--6467573 Score: 75
Period size: 26 Copynumber: 2.0 Consensus size: 26
6467513 GTTGACTTAG
*
6467523 GCATACAGAATTCATTTCCAGTCTAC
1 GCATACAGAATTCATTCCCAGTCTAC
* *
6467549 GCATACCGAGTTCATTCCCAGTCTA
1 GCATACAGAATTCATTCCCAGTCTA
6467574 AGATTGGATC
Statistics
Matches: 22, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.27, C:0.29, G:0.14, T:0.29
Consensus pattern (26 bp):
GCATACAGAATTCATTCCCAGTCTAC
Found at i:6469325 original size:26 final size:26
Alignment explanation
Indices: 6469295--6469347 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
6469285 GTTGACTTAG
6469295 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6469321 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6469347 G
1 G
6469348 ATTGGATCGG
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6470221 original size:26 final size:26
Alignment explanation
Indices: 6470185--6470237 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6470175 GTTGACTTAG
6470185 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6470211 GCATACGGAGTTCGTTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6470237 G
1 G
6470238 ATCGGACTGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.26, G:0.23, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:6471121 original size:26 final size:26
Alignment explanation
Indices: 6471085--6471137 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6471075 GTTGACTTAG
6471085 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
6471111 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
6471137 G
1 G
6471138 ATCGGACCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:6471843 original size:26 final size:26
Alignment explanation
Indices: 6471807--6471859 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
6471797 GTTGACTTAG
6471807 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
6471833 GCATACGGAGTTTATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
6471859 G
1 G
6471860 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Done.