Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09
Sequence: NW_019167971.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_23, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000
Length: 19268551
ACGTcount: A:0.31, C:0.18, G:0.18, T:0.31
Warning! 68000 characters in sequence are not A, C, G, or T
File 7 of 120
Found at i:700811 original size:26 final size:26
Alignment explanation
Indices: 700775--700827 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
700765 CTGGTCTGAT
*
700775 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
700801 CTTAGACTGGGAATGAAATCCGTATG
1 CTTAGACTGGGAATGAAATCCGTATG
700827 C
1 C
700828 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.19, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAAATCCGTATG
Found at i:701286 original size:895 final size:895
Alignment explanation
Indices: 699898--702763 Score: 3646
Period size: 895 Copynumber: 3.2 Consensus size: 895
699888 CCAGTCCGAT
* * *
699898 CTTAGACTGGTAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGTGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
699963 CGGCCAGAGGGGCGAGATGTGCAAGCCGGGGATCGGCCGGGTCACCCTCTGCATGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* **
700028 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTTCGTACACCTAAGCCAA
131 TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * ** *
700093 TCAACGAAACGAACGGGCGGGCGAGCGGGCAGGTACTACGCCAGCCAAAGAGACGGGATGCGCAA
196 CCGACGAAACG-A---GCGGGCGGGCGGGC----ACTACGCTGGCCAGAGAGACGGGATGCGCAA
* * * * * **
700158 GCCATGGATCGATAAGGTGGTAGGTAGTGTTTAGGCAGATCTTTATATTTCTATGTG-CAATGCC
253 GCCGTGGATCGATAGGGTGGTAGGT-GGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCC
700222 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
317 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * *
700287 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAGGGTTCGAGATTTGTTAAAATTTTT
382 CGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGATTCGAGATTTTTTAAAATTTTT
** * * * *
700352 TCAAAAGCAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGGCGTGCATAAA
447 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
*
700417 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACGATTTGAAAAAAGTGTCCCCATTT
512 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
700482 CAGACACTTTAATAGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
577 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * *
700547 GTTCACAAGGTTTGATGAGGGATAGGGGGCCAAAATAAGGACCAAGTACCAGCACCCATCGCACA
642 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * * * * *
700612 TCATGTGTGCACA-CCCCTCGTTCCCCCCGATCGCCAGAACCCTAATGCCGCCAGTCAGGTTCTC
707 TCATGTGCGCACACCCCCCCG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTC
* * *
700676 CGGCGATGCTCTGGCAATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCA
771 CGACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCA
* * * *
700741 ACGTGTGCTGCTGTAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
836 GCATGTGCTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
700801 CTTAGACTGGGAATGAAATCCGTATGCCTAAGTCAACCCACGAAATGAGCGTACAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** *
700866 CAACTAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTC-GGTCCCCCCTCTGCGTGCTGCCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGT-CCCCCTCTGCGTGCTGCCGATC
* * *
700930 CTGCTACCACAACCCTCAGTCCGGTCTGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGGCA
130 CTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
700995 ACCGACGAAACGAGCGGGCGGGCGGGTACTGCGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGG
195 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGG
*
701060 ATCGATAGGGTGGTAGGTGGGTTTAGGCACACCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
260 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTAT
* * * *
701125 GGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGATGTTTCATGGCAAGATGAGTCGT
325 GGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGT
* * * *
701190 TTTCTATTTTTCATGATTTTCGAAACTTTTTATGATTCGGGATTTTTTAAAATTTTTTTGGAAGG
390 TTTCTATTTTTCACGATTTTCGAAACTTTTTACGATTCGAGATTTTTTAAAATTTTTTCGGAAGG
* * * *
701255 AGTTTTGGCCCCAAACCTGGTAGATGTGATCCTTTTATTTTTTTTGGCATGCACAAAAAAATTCA
455 AGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
* *
701320 GCTAAAAGCTCGAAGTGTACAAGAATTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
520 GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
* * * * *
701385 TTAATGGCTACCGGTAGCAAACTTGTAAAATCTCAAATGCTCTTTAAAGGGGTGTGAGTTCTTGA
585 TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA
* * *
701450 GGTTTGATGAGGGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAACACACATCATGTGC
650 GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGC
* * * * **
701515 GCACGCCCCCTCGGCCCCCCCCGATTGTCGGAACCCCAATGCCGTCGGTCAAGTTCTCCGGTGAT
715 GCACACCCCC-CCG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGAT
* * *** *
701580 GCTCCGACGATGGTGACCCGACGAAGAAAAATGCGGTGCCAGCACAAGCCCGAGCCCAGCATGTG
778 GCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTG
* * *
701645 CTGCC-CAACCCTCGGTCTGATCCGATCTTAGACTAGGAATGAACTCCGTATG
843 CTGCCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
701697 CTTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACAAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* *** * * *
701762 CGGCTC-GAGGGGTGGGATGCGCAAAATGGGGATCGGTCGGGTCCACCTCTACGTGCTGCCAATC
66 CGGC-CAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * *
701826 CTGCTACCACAACCCTCAGTCTGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * *
701891 ACTGACGAAATGAGTGGGTGGGCGGGCGGGCACTA-GGTCGGCCAGAGAGACGGAATGGGCAAGC
195 ACCGACGAAACGA----GCGGGCGGGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGC
* * * *
701955 CGTGGATTGATAGGGTGGTAGTTGGGTTTAGGCACATCTTCACT-TTTCTACGTGCGAATGCCAT
255 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCA-TATTTCTGCGTGCCAATGCCAT
* * * * *
702019 TTTTATGGCTTGTAAATTCATACAACGGTCCTTTAAGCCTTCACGTGAAGTTCCACGGCAAGATG
319 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACG
* * * *
702084 ACTCGTTTTCTATTTTTCACGATTTTGGAAACTTTTTACGGTTCGAGGTTTTTTAAAATCTTTTC
384 ACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTTACGATTCGAGATTTTTTAAAATTTTTTC
* *
702149 ------------GG-----AACTCGGTAGAAGTGATCCTTGTATTTTTGTTGGCATG--CAAAAA
449 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * * *
702195 AATTCAGTTAAAAACTAGAAGTGTAGAAGTTTTTGTGACCATTTGAAAGAAGTGTCCCCATTTCA
514 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
702260 GACACTTTAACGGCTATTGGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGAGGGTGTGAGT
579 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
702325 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
644 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* ** * * * *
702390 ATGTGCGCACACCCCCCCGACCGCCTTGATCGTCAGAACCCCAATGTCGCCGGTCAGGTTCTTCG
709 ATGTGCGCACACCCCCCCG-CCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCG
* * * * * *
702455 ACGATGCTCCGGTGATGGTGCCCTGGCGAAGAAAAATGCGGCACCAGTACATGCCCGAGGCCAGC
773 ACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGC
** * ** * * *
702520 ATGTGCTGCCATAACCCTTGGT-TCAATCCGATCTTAGACTAGGAATGAACTTCGTATG
838 ATGTGCTGCCGCAACCCTCGGTCT-GGTCTGATCTTAGACTGGGAATGAACTCCGTATG
* *
702578 CTTAGACTGGGTATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * *
702643 CGACCAGATGGGCGGGATACGCAAGCCACGGATCGGCCGGGTCCCCCTCCGCATGCTGCCCATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
** * *
702708 TGCTACCACAACCCTCGGTTTGGT-TCGATCTTAGACTAGGAATGAACTCCTTATGC
131 TGCTACCACAACCCTCGGTCCGGTCT-GATCTTAGACTGGGAATGAACTCCGTATGC
702764 TTAGTCTGGG
Statistics
Matches: 1719, Mismatches: 228, Indels: 54
0.86 0.11 0.03
Matches are distributed among these distances:
880 103 0.06
881 398 0.23
883 33 0.02
888 2 0.00
894 25 0.01
895 423 0.25
896 224 0.13
897 104 0.06
899 14 0.01
900 210 0.12
901 1 0.00
902 4 0.00
903 178 0.10
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (895 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
TGCTACCACAACCCTCGGTCCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CCGACGAAACGAGCGGGCGGGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGA
TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATG
GCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTT
TTCTATTTTTCACGATTTTCGAAACTTTTTACGATTCGAGATTTTTTAAAATTTTTTCGGAAGGA
GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAG
CTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTT
TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCCCGCCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCT
CCGGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTG
CCGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:701700 original size:26 final size:26
Alignment explanation
Indices: 701671--701723 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
701661 CTGATCCGAT
701671 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
701697 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
701723 C
1 C
701724 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:702593 original size:26 final size:26
Alignment explanation
Indices: 702552--702604 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
702542 TCAATCCGAT
*
702552 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
702578 CTTAGACTGGGTATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
702604 C
1 C
702605 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:702775 original size:26 final size:26
Alignment explanation
Indices: 702737--702789 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
702727 TTGGTTCGAT
* *
702737 CTTAGACTAGGAATGAACTCCTTATG
1 CTTAGACTAGGAAAGAACTCCGTATG
* *
702763 CTTAGTCTGGGAAAGAACTCCGTATG
1 CTTAGACTAGGAAAGAACTCCGTATG
702789 C
1 C
702790 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAAAGAACTCCGTATG
Found at i:702895 original size:185 final size:185
Alignment explanation
Indices: 702548--702948 Score: 489
Period size: 185 Copynumber: 2.2 Consensus size: 185
702538 TGGTTCAATC
* * *
702548 CGATCTTAGACTAGGAATGAACTTCGTATGCTTAGACTGGGTATGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAAGAACTCCGTATGCCTAAGTCA
* * * * *
702613 ACCCACGAAACGAGCGTGCGGGCGCTCAGTCGACCAGATGGGCGGGATACGCAAGCCACGGATCG
66 ACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATACACAAGCCACGGATCG
* * * * ** *
702678 GCCGGGTCCCCCTCCGCATGCTGCCCATCCTGCTACCACAACCCTCGGTTTGGTT
131 ACCAGGTCCCCCTCCGCATACTGCCCATCCTGCTACCACAACCCTCAGAATGATT
* *
702733 CGATCTTAGACTAGGAATGAACTCCTTATGCTTAGTCTGGGAAAGAACTCCGTATGCCTAAGTCA
1 CGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAAGAACTCCGTATGCCTAAGTCA
* * * *
702798 ACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGCGAGATGCACAAGCTGA-GGATC
66 ACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATACACAAGC-CACGGATC
* * * * * **** *
702862 GATCAGGTCCTCCTCTGCGTACTGCCGATCCTGCTGTTGCAACCTTCAGAATGATT
130 GACCAGGTCCCCCTCCGCATACTGCCCATCCTGCTACCACAACCCTCAGAATGATT
* *
702918 CAATCTTAGACTAGGAATGAACTCTGTATGC
1 CGATCTTAGACTAGGAATGAACTCCGTATGC
702949 CTAAGCCAAC
Statistics
Matches: 181, Mismatches: 34, Indels: 2
0.83 0.16 0.01
Matches are distributed among these distances:
185 180 0.99
186 1 0.01
ACGTcount: A:0.24, C:0.28, G:0.26, T:0.22
Consensus pattern (185 bp):
CGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAAAGAACTCCGTATGCCTAAGTCA
ACCCACAAAACGAGCGTGCGGGCGCTCAGCCGACCAGAGGGGCGAGATACACAAGCCACGGATCG
ACCAGGTCCCCCTCCGCATACTGCCCATCCTGCTACCACAACCCTCAGAATGATT
Found at i:703643 original size:26 final size:26
Alignment explanation
Indices: 703614--703666 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
703604 CTGGTCTGAT
703614 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
703640 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
703666 C
1 C
703667 CTAAGTCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:705438 original size:26 final size:26
Alignment explanation
Indices: 705409--705461 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
705399 CTGGTTCGAT
705409 CTTAGACTAGGAATGAACT-CTGTATG
1 CTTAGACTAGGAATGAACTGC-GTATG
*
705435 CTTAGACTGGGAATGAACTGCGTATG
1 CTTAGACTAGGAATGAACTGCGTATG
705461 C
1 C
705462 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTGCGTATG
Found at i:705922 original size:891 final size:890
Alignment explanation
Indices: 702716--712746 Score: 12481
Period size: 891 Copynumber: 11.2 Consensus size: 890
702706 CCTGCTACCA
* * * * *
702716 CAACCCTCGGTTTGGTTCGATCTTAGACTAGGAATGAACTCCTTATGCTTAGTCTGGGAAAGAAC
1 CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
702781 TCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCTAGAGGGGCGAGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * ** *
702846 GCA-CAAGCTGAGGATCGATCAGGTCCTCCTCTGCGTACTGCCGATCCTGCTGTTGCAACCTTCA
131 G-AGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC-
* * * * * * * * *
702910 GA-ATGATTCAATCTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACTGATGAAACGAACAG
194 GATCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGG
* * * * * *
702974 GCAGGCACTACGTCGGCCAGAGAGATGGCATGCGCAAGCCATGGATCGATAGGGTGGTAAGTGGG
259 GCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG
* * * *
703039 TTTAGGCACATCTTCATATTTTTACGTGCCAATGCCATTTTTATGGATTGTAAATTCATACAATG
324 TTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
* * * *
703104 GTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGACAACTCGTTTTCTATTTTTCACGATATTC
389 GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
* * * **
703169 AAAACTTTTTGCGGTTCGAGATTGTTTAAAATTTTTTCGGAAGGAGTTTT-GCTACAAACTTGGT
454 GAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
* * *
703233 AGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAACTAAAAACTCGATGTGTACA
519 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT-AGCTAAAAACTCGAAGTGTACA
* *
703298 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCTGACACTTTAATGGCTACTAGCAGCAAA
583 AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
703363 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
648 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
* * *
703428 CCAATATAAGGGCCAAGTACTAGTACCCATCGTACATCATGTGCGCACA-CCCCCTGGCCCCCCC
713 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCC
* * *
703492 GATCGCTGG-ACCCTAATGCCGCCGGTCAGGTTCT-C--CGA-------CG-TGGTGCCCCGACG
778 GATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGCGATGGTGCCCCGACG
* *
703545 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCGAGCATGTGCTGCCG
843 AAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
703593 CAACCATCGGTCTGG-TCTGATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAA
1 CAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * *
703657 CTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCAGTCGGCCAGAGGGACGGGA
65 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * * **
703722 T-ATGCAAGCCAGGGA-CGATCGGGTCCCCCTTTACGTGCTGTCGATCCTGCTATCGCAACCCTC
130 TGA-GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC
* * *
703785 GGTCTGG-TCTGATGTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACAAGCG
194 GATCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG--A-AA---
* *
703849 GGCGGGCGGGCGGGCGAGCACTACGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
252 --CGAGCGGGC--G-G-GCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAG
***
703914 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTA
311 GGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTA
*
703979 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTCGTTTTCTATT
376 AATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATT
** * *
704044 TTTCATAATTTTTGAAACTTTTTGCAGTTCGGGATTTTTTAAAAATTTTTT-AGAAGGAGTTTTG
441 TTTCACGATTTTTGAAACTTTTTGCAGTTCGAGATTTTTT-AAAATTTTTTCGGAAGGAGTTTTG
* *
704108 GCCCCAAACTTGGTAGACGTGATTCTTGTATTTTTGTTGGCATGCACAAAAAAACTCAGCTAAAA
505 GCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA-TTAGCTAAAA
* * * * *
704173 ACTCGATGTGTACAAGTTTTTGTGGCCATTTGAAAAAAGCGTCCCCATTTGAGACACTTTAATGG
569 ACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGG
* * *
704238 CTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGGGTTCTTGAGGTTTGA
634 CTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGA
* *
704303 TGAAGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACC
699 TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC
* * * **
704368 CCCC--G-CCCCCCGATCGCTGAAACCCCATTGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGAC
764 CCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCG-C
* * * * * *
704430 GATGGTACCCCGATGAAGAAAAATGC-AGCACCAACACATGCTCGAGCCCAACATTTGCTGCCG
828 GATGGTGCCCCGACGAAGAAAAATGCGA-CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
704493 TAA-CCTACGGTCAGGTCCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAA
1 CAACCCT-CGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * * ** *
704557 CTTCGTATGCCTAAGTCAACCCACGAAACGAACGTGTGGGCCCTCAACTGGCCAGAGGGGTAGAA
65 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * * * * * ** * *
704622 TGCG-ATAGCCGGGAATCGGCCAGGTACCCCTCTGCATGCTGTCAATCCTATTGCCACATCCCTC
130 TGAGCA-AGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC
* * * * **
704686 -AGTGC-GGTCCAATCTTAGACTGAGAATGAACTCCATATGCCTAAGCCAACCGATAAAACTAGT
194 GA-T-CTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-
* * * *
704749 GGGGGGCGGGCACTATGCCGGCTAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
254 AGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
***
704814 GTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
319 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
*
704879 CAATGGTCCCTTAAGCCTTCACGTGAAGTGTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
384 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGA
* * * * *
704944 TTTTTGAAACTTTTCGCAGTTCGAGATTTTTTTAAATTTTTTCGGAAAGATTTTTGTCCCCAAAC
449 TTTTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC
* * * *
705009 GTGGTACACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATGTAGCTAAAAACTCAAAGT
514 TTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT-TAGCTAAAAACTCGAAGT
* *
705074 GTACACGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGACTACTGGCA
578 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * * *
705139 GCAAACCTATAAGATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATA
643 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* *
705204 GGGGGCCAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGCGCACACCCACCTGGCC
708 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCC
* *
705269 CCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGACGATGCTCCAGTGATGGTGCC
773 CCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCC-GCGATGGTGCC
* *
705334 CCGACGAAGAAAAATGCGACACCAGCAAATGCCCGAGCCCAGCATGTGCTGCCA
837 CCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
705388 CAACCCTCGGTCTGGTTCGATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAAC
1 CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
705453 TGCGTATGCCTAAGTCAACCCATGAAACTAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * *
705518 GAGCAAGTCGGGGATTGGTCGGGTCCCCCTCTGCGTGTTGTCGATCCTGCTGCCGCATCCCTCGA
131 GAGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA
* * * *
705583 TCTGGTTCAATCTTAGACTGGGAGTGATCTCCGTATGCCTAACCCAACCGACGAAACGAGCGGGC
196 TCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
* * ** * * *
705648 GGGCACTGCGCCAGCCAGAGAGACATGATG-GGAAGTCGTGCATCGATAGGGTGGTAGGTGGGTT
261 GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
* * *
705712 TAGGCACATC-TCTATATTTTTGCTTGCCAATGCCATTTTTATGGCTTGTAAATTCATAAAATGG
326 TAGGCACATCTTC-ATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
705776 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
390 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * * *
705841 AAACTTTTCGCAGTTCGAGATTTTTTTAAATTTTTTCGGAAAGATTTTTGTCCCCAAACGTGGTA
455 AAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
* * * *
705906 CACGTGATCCTTATATTTTTGTTGGCATGCACAAAAAAATGTAGCTAAAAACTCAAAGTGTACAC
520 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT-TAGCTAAAAACTCGAAGTGTACAA
* *
705971 GATTTTGTGACCATTTGAAAACAGTGTCCCCATTTCAGACACTTTAATGACTACTGGCAGCAAAC
584 GATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
* * * *
706036 CTATAAGATCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTTGAGGTTTGATGAGGGATAGGGGGC
649 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* *
706101 CAATATAAGGGCCAAGTGCCAGCACCCATCGCACATCATGTGCGCACACCCACCTGGCCCCCCCG
714 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCG
* *
706166 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCTGACGATGCTCCAGTGATGGTGCCCCGACG
779 ATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCC-GCGATGGTGCCCCGACG
*
706231 AAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCA
843 AAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
706279 CAACCCTCGGTCTGGTTCGATCTTAGACTAGGAATGAACTCTGTATGCTTAGACTGGGAATGAAC
1 CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * *
706344 TCCGTATGCCAAAGTCAACCCACGAAACGAGGGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * ** * *
706409 GAGCAAGTCGGGGATTGGTCGGGTCCCCCTCTGTGTGTTGCCGATCCTGCAACTGCAACCCTTGA
131 GAGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA
* *
706474 TCTGGTTCGATCTTAGACTGGGAATGATCTCCGTATGCCTAAGCCAACTGACGAAACGAGCGGAC
196 TCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-C
* * *
706539 GGGCGGGCAGGCGGGCAATACGCCGCCCATAGAGACGGGATG-GGAAGCCGTGGATCGATAGGGT
257 GGGCGGGCA------C--TACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT
706603 GGTAGG-GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
314 GGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAAT
*
706667 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCAATTTTT
379 TCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTT
** * * *
706732 CACGATTTTCAAAATTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
444 CACGATTTTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCC
*
706797 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAACAATTCAGCTAAAAACTC
509 CAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT-AGCTAAAAACTC
* *
706862 GAAGTGTACAAGATTTTGTGAGCATTTGAAAAAAGTGTCCCCATTTCAGGCACTTTAATGGCTAC
573 GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTAC
* * *
706927 TGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGGTGTGAGTTCTGGAGGTTTGATGAG
638 TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAG
* *
706992 TGATAGGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-CTGCAAATCATGTGCGCACACCCC
703 GGATA-GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC-GCACATCATGTGCGCACA-CCC
* * * *
707056 CCCTGGTCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGTTCTTCGATGATGCTCCGACG
765 CCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCG-CG
* * * * * *
707121 ATGGTGCCCCGACGAAGAAAAATACGGCAGCAGCACATGCTCGAGCCTAGCACGTGCTGCCAG
829 ATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCC-G
* *
707184 -AACCCTCGGTCT-GTTCCAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAA
1 CAACCCTCGGTCTGGTT-CGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * * *
707247 CTCTGTATGCCTAAGTCAACCCACGAAACGAGCTTGCGGGTGCTCAGTCGGCCAGAGGGGCAGCA
65 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * ** *
707312 TGAGCAAGTCGGGGATCGATCGGGTCCCCCTCTGCATGTTGTTGATCCTGCTGCCGCAACCCTTG
130 TGAGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCG
* * *
707377 ATCTGGTTCGATCTTAGACTAGGAATGAACTCCCTATGCCTATGCCAACCGATGAAACGAGCGGA
195 ATCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC---G--ACGA----A
* * * **
707442 AGGGCGGGCGGGCGGGCACTACGTCGGCTAGAGAGACGGGATGCGCAAGCCACGGATCGATAGGG
251 A---CGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGG
* * *
707507 TGGTAGGTGGGTTTAGGCACATCTTCATAGTTCTGCGTGCCAATGCCATTTTTATGGCTTCTAAA
313 TGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAA
* *
707572 TTCATACAATGCTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTT
378 TTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTT
** * * * ** *
707637 TCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGAAAGGAGTTTTTTCG
443 TCACGATTTTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCC
* * * * *
707702 CCAAACTTGGCAGACGTGATCCTTGTATTTTTGTTGCCTTGCACAAAAACATTTAGCTAAAAAGT
508 CCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA-AATTAGCTAAAAACT
*
707767 CGAAGTGTACATGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
572 CGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTA
*
707832 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGA
637 CTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA
* * *
707897 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCACCGCACATCATGTGTGCATACCCCC
702 GGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC
* * * * * * * *
707962 CCGGCCCCCCCGATCGTCGGAACCCCAATGCCG-CTAGTCAGGTTCTTCGGCAATGCTACGGTGA
767 CTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTC-GGTCAGGTTCTCCGACGATGCT-CCGCGA
* * * * **
708026 TGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGGCCGAGCCCAGCATGTTCTATCG
830 TGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* *
708087 TAA-CC-C--TC-GG--C---C-T--A----G--T---CT--G-AT-CTGAGACTGGGAATGAAC
1 CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* ** * * * *
708126 TCCGTATGCCTAAGTCAACCCACGAAATGAGCGTATGAGCGCTCAACTGGCCAGAGGGGCAGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * *** * *
708191 GCGCAAGTCGGGGATCGATCGGGTCCCCCTCTGCGTGTTGCCAATCCTGCAGCTTTAACCCTTGG
131 GAGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA
* *
708256 TCTGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACTGATGAAACGAGCGGG
196 TCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGG
* * *
708320 CGGGTGGGCACAACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAAGGTGGTAGGT
260 C----GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
*
708385 GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAGTTCATACA
321 GGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
*
708450 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGGTT
386 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
** * * * **
708515 TTCAAAACTTTTTACTGTTCGGGATTTTTTAAAATTTTTTCGGAAGGAGTTTTACCCCCAAACTT
451 TTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * * *
708580 GGTAGACATGATCCTTGTATTTTTGTTGGCTTGTACAAAAAAATAAGCTAAAAAACTCGAAGTGT
516 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTAGCT-AAAAACTCGAAGTGT
* *
708645 ACAAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACA-TTTAATGGCTACTGGAAGC
580 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * *
708709 AAACCTGTAAAATCTCAAATGCTTTTTAAGAGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGG
645 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * *
708774 GGGACAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCTCCCCGGC
710 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCC-CCCTGGC
* * **
708839 CCCTCCGATCGCAGGAACCCCAATGCCGTCGGTCAGGTTCTCCGGTGATGCTCCGACGATGGTGC
772 CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCG-CGATGGTGC
** *
708904 CCCGGTGAAGAAAAATGCAACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
836 CCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* ** * * * * *
708959 CAACCCTCCGTCAAGTTTGATCTTAGACTGGGAATGCACTCCATATGCTTAGACTAGGATTGAAC
1 CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
* * * *
709024 TTCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGGGCGCTCAGCCGGCCGGAGGGGCAGGAT
66 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
* * * * * * * * * *
709089 -ACGCAAGTCGGGGATCAGCCGGGTCCCCCTTTGCATGCTACCGATCCTACTGTCGTAGCCCTCG
131 GA-GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCG
* *
709153 GTCTGG-TCTGATCTTAGACTGGGACTGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCAG
195 ATCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAC--G-A-
* * * *
709217 GCGGGCGGGCACTACGCTGACCAGAGAGACGGGATGCGCAAGTCGTGGAACGATAGGGTGGTAGG
255 GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* *
709282 TGGGTTTAGGCACATCTTTATATTTCTACATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
320 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
709347 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
385 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * * *
709412 TTTTGAAACTTTTTACAGTTCAAGATTTTTTAAAATTTTTTCAGAAGGATTTTTGGCCCCAAACT
450 TTTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
* * ** * * * *
709477 TGGCAGACATGATCCTCATATTTTTGTTGGCTTGCATAAAAAAATCAGCTAAAAACTCAAAGTGT
515 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTAGCTAAAAACTCGAAGTGT
*
709542 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGC
580 ACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* * * *
709607 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTAAGTTCTCCAAGTTTCATGAGGGATAGG
645 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* * *
709672 GGGCCAATATAAGGGCCAAGTACCAGCACCCATTGCACATCATGTGCGCACACCCCCCCGACCCC
710 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCC
** * * *
709737 CCTAATCTCCGGAACCTCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGGCGATGGTGCCCT
775 CCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCC-GCGATGGTGCCCC
* * * * * *
709802 GACGAAGAAAAATGTGGCACTAACACATGCCCAAGCCCAGCATGTGCTGCTG
839 GACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
* * * *
709854 CAACCCTCGGTCCGG-TCTGATCTTAGATTGGGAATGAACTCCGTATGCTTGGAATGGGAATGAA
1 CAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * * * ** * *
709918 CTCTGTATGCCTAAGTCAACCCATGAAACGAGCGTACGGGTGCTCAATCGACCAGAAGGGCGGGA
65 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
* * * * * *
709983 T-ACGCAAGCCGGGGATCAGTCAGGTCCCCCTCTGTGTGCTGCCGATCCTACTACCGCAATCCTC
130 TGA-GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTC
* ***
710047 GATCTGGTCCAATCCGATCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCAATTTACGAAATG
194 GATCTGGT----T-CGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACG-AA--
* *
710112 AGCGGGCAGACGGGTGGGCGGGCACTACGTCC-GCCAGAGAGATGGGATGCGCAAGCTGTGGATC
251 A-C--G-AG-C----GGGCGGGCACTACG-CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
* ** * *
710176 GATAGGGTGGTAGGTGGGTTTAGGTACATCTTCATATTTCTGTGTACCAAAGCCATTTTTATGGC
306 GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
*
710241 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATTGCAAGACGACTCGTTTT
371 TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
* * * * * *
710306 CTATTTTTCACGATTTTTGAAACCTTTTGC-GCTTTGGGATTTTTTCAAACTTTTTCGGCAGGAG
436 CTATTTTTCACGATTTTTGAAACTTTTTGCAG-TTCGAGATTTTTTAAAATTTTTTCGGAAGGAG
* * * *
710370 TTTTGGCGCCAAACTTGGTAGATGTGATCCTTGTATTTTTGTTGGCCTGCACAAAACAATTTAGC
500 TTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA-AAATTAGC
710435 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-GAACACTT
564 TAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG-ACACTT
*
710499 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAGATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
628 TAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAG
*
710564 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCG
693 GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
* * * *
710629 CACACCCCTCC-GGCCCTCCCGATCGTCGAAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATG
758 CACACCCC-CCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATG
* * * * * * *
710693 CTTCGGTGATGGTGCCCTGGCGAAGAAAAATACGACACCAGCAAATGCCCGAGTCCAGCATGTGC
822 C-TCCGCGATGGTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGC
*
710758 TGCTG
886 TGCCG
* *
710763 CAACCCTCAGTCT-GATCTGATCTTAGACTGGGAATGAACAT-CGTATGCTTAGACTGGGAATGA
1 CAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTGGGAATGA
* * * * * *
710826 ACTCTGTATGCCTAATTCAACCCACGAAACGAGCATGCGGGCGCTTAGCCAGCCAAAGGGGCGGG
64 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGG
* * * * * * *
710891 AT-ACGCAAGCCGAGCATTGGCCGGGTCCCCCTCTGCGTGCTGCCAATCCTGCTGTCGTAACCCT
129 ATGA-GCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCT
* *
710955 CCATCCGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATAAAACGAGC
193 CGATCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCG-----ACGA--
* * * * * * * *
711019 ATGCGGGCGGGCGGGCGGGCAATGCGTCGGCCAGACG-GACGGGATGCACAAGCTGTCGATCGAT
250 A-----ACGAGCGGGCGGGCACTACGCCGGCCAGA-GAGACGGGATGCGCAAGCCGTGGATCGAT
* *
711083 AGGGTGGTAGGTGGGTTTAGGCACATGTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTG
309 AGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTG
711148 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
374 TAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA
* ** * * * * *
711213 TTTTTCACGACTTTCAAAACATTTTGCGGTTCAAGATTTTTTGAAATTTTTTCGTAAGGAGTTTT
439 TTTTTCACGATTTTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTT
* *
711278 -GCCCAAAACTTGGTAGACGTGATCCTCGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAA
504 GGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT-AGCTAAA
* *
711342 AACTTGAAGTGTACAAGATTTTGTCACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
568 AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
* * * * *
711407 GCTACTGGCGGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGAGTCAGTTCTCAACGTTTG
633 GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
* *
711472 ATGAGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCACCCATCACACATCATGTGCGCACAC
698 ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-
* * * * ** * *
711537 CTCCCCCTGACCCCCCCGATCGTCGGAACCCCAGTGTCACCGGTCAGGTTCTTCGATGATGCTCC
762 C-CCCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCC
* * * *
711602 GACGATGGTGCACTGACGAAGAAAAATG-TAGCACCAGCACATGCCCGAGCCCAGCATGTGCTGT
826 G-CGATGGTGCCCCGACGAAGAAAAATGCGA-CACCAGCACATGCCCGAGCCCAGCATGTGCTGC
711666 CG
889 CG
*
711668 CAACCTTCGGTCCGATCCCATCTTAGATTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
1 CAACC--C--T-CG-----GTC------T-GG--T----T-CG-AT-CTTAGACTGGGAATGAAC
*** * * *
711733 TCCGTATGCTTAGACTAATATTTGAACTCCGTATGCCTAAGTCAACCCATGAAACTAGCGTGCGG
40 TCCGTATGCTTAGACTGGGA-ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGG
* * * * * *
711798 GCGCTCAGCCGACCAGAGGGGCGAGATGCGCAAGCCGGCGATCGGCCGGGTCCCCCTCTGCATGC
104 GCGCTCAGCCGGCCAGAGGGGCGGGATGAGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGC
* * * * ** *
711863 TGCCAATCTTGCTACCACAACCCTCGGCCCGG-TCTGATCTTAGACTGGGAATGAACTCCGTATG
169 TGCCGATCCTGCTGCCGCAACCCTCGATCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATG
* *
711927 CCTAAGCCAACCGACGAAACTAACGGGCGGGTGGGCGGGCAGGCACTATGCCGGCCAGAGAGACG
233 CCTAAGCCAACCGACG--A--AACGAGC----GGGC--G--GGCACTACGCCGGCCAGAGAGACG
* *
711992 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGACACATCTTCACATTTCTGCAT
286 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
* * *
712057 GCCAATGCCTTTTTTATGGCTTCTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTGC
351 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * * * *
712122 ATGGCAAGACGACTCATTTTCTATTTTTCATGATTTTTGAAACTATTTACGGTTCAAGATTTTTT
416 ATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGCAGTTCGAGATTTTTT
* * *
712187 AAAATTTTTTCGGAAGGAGTTTTGGTCCCAAACTTGGTAGACATGATCCTTGTAATTTTGTTGGC
481 AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
*
712252 ATGCATAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
546 ATGCACAAAAAAATT-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* *
712317 TCCCCATTTCAGACACTTCAATGGCTACTGGCAGCAAACCTGTAAAATCGCAAATGCTCTTTAAG
610 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * *
712382 GGGGTGTGAGTTCTCGAGGTTTCATGAGGGATAGGGGGCCAATATTAGGGCCAAGTACCATCACC
675 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * *
712447 CATCACACATCATGTGCGCACACCTCCCCCGGCCCGCCCGATCGTCGGAACCCCAATGCCGTCGG
740 CATCGCACATCATGTGCGCACACC-CCCCTGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGG
* * *
712512 TCAGGTTCTCCGACGATGCTCGGACGATGGTGCCCCGACGAAGAGAAATGC-AGCACCAGCATAT
804 TCAGGTTCTCCGACGATGCTCCG-CGATGGTGCCCCGACGAAGAAAAATGCGA-CACCAGCACAT
712576 GCCCGAGCCCAGCATGTGCTGCCG
867 GCCCGAGCCCAGCATGTGCTGCCG
* * * * * *
712600 TAACCCTTGATCCGG-TCTGATCTTAGACTGGGAATGAACTCCGTATGCTTGGAATGGGAATGAA
1 CAACCCTCGGTCTGGTTC-GATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAA
* * *
712664 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGTGCTCAGCCGACCAGAGGGGCGGGA
65 CTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGA
*
712729 T-ACGCAAGCCGAGGATCG
130 TGA-GCAAGCCGGGGATCG
712747 ATCGTTTTCT
Statistics
Matches: 8043, Mismatches: 878, Indels: 438
0.86 0.09 0.05
Matches are distributed among these distances:
866 8 0.00
869 134 0.02
870 331 0.04
871 5 0.00
872 108 0.01
873 6 0.00
874 1 0.00
875 5 0.00
876 85 0.01
877 124 0.02
878 168 0.02
879 4 0.00
880 1 0.00
882 3 0.00
883 1 0.00
884 6 0.00
885 2 0.00
887 16 0.00
888 234 0.03
889 248 0.03
890 8 0.00
891 838 0.10
892 489 0.06
893 4 0.00
894 8 0.00
895 584 0.07
896 17 0.00
897 60 0.01
898 580 0.07
899 6 0.00
900 211 0.03
901 84 0.01
902 366 0.05
903 342 0.04
904 725 0.09
905 263 0.03
906 394 0.05
907 9 0.00
908 269 0.03
909 471 0.06
910 8 0.00
912 11 0.00
913 4 0.00
915 4 0.00
916 2 0.00
921 1 0.00
922 3 0.00
923 1 0.00
924 5 0.00
927 4 0.00
928 5 0.00
929 4 0.00
930 6 0.00
931 35 0.00
932 493 0.06
933 239 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (890 bp):
CAACCCTCGGTCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGAT
GAGCAAGCCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTGCCGCAACCCTCGA
TCTGGTTCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGC
GGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTT
TAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGT
CCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGA
AACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAG
ACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTAGCTAAAAACTCGAAGTGTACAAGA
TTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCT
GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCA
ATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCCCCCCGAT
CGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGCGATGGTGCCCCGACGAAG
AAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCG
Found at i:706329 original size:26 final size:26
Alignment explanation
Indices: 706300--706352 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
706290 CTGGTTCGAT
*
706300 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
706326 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
706352 C
1 C
706353 CAAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:707242 original size:26 final size:26
Alignment explanation
Indices: 707204--707256 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
707194 CTGTTCCAAT
*
707204 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
707230 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
707256 C
1 C
707257 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:710820 original size:26 final size:26
Alignment explanation
Indices: 710784--710836 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
710774 CTGATCTGAT
710784 CTTAGACTGGGAATGAACATC-GTATG
1 CTTAGACTGGGAATGAAC-TCTGTATG
710810 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
710836 C
1 C
710837 CTAATTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
25 2 0.08
26 24 0.92
ACGTcount: A:0.28, C:0.17, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:711718 original size:26 final size:26
Alignment explanation
Indices: 711689--711748 Score: 111
Period size: 26 Copynumber: 2.3 Consensus size: 26
711679 CCGATCCCAT
*
711689 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
711715 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
711741 CTTAGACT
1 CTTAGACT
711749 AATATTTGAA
Statistics
Matches: 33, Mismatches: 1, Indels: 0
0.97 0.03 0.00
Matches are distributed among these distances:
26 33 1.00
ACGTcount: A:0.27, C:0.18, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:711766 original size:27 final size:26
Alignment explanation
Indices: 711699--711768 Score: 95
Period size: 26 Copynumber: 2.7 Consensus size: 26
711689 CTTAGATTGG
**
711699 GAATGAACTCCGTATGCTTAGACTGG
1 GAATGAACTCCGTATGCTTAGACTAA
711725 GAATGAACTCCGTATGCTTAGACTAA
1 GAATGAACTCCGTATGCTTAGACTAA
* *
711751 TATTTGAACTCCGTATGC
1 GA-ATGAACTCCGTATGC
711769 CTAAGTCAAC
Statistics
Matches: 39, Mismatches: 4, Indels: 1
0.89 0.09 0.02
Matches are distributed among these distances:
26 25 0.64
27 14 0.36
ACGTcount: A:0.29, C:0.20, G:0.21, T:0.30
Consensus pattern (26 bp):
GAATGAACTCCGTATGCTTAGACTAA
Found at i:713261 original size:26 final size:26
Alignment explanation
Indices: 713232--713283 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
713222 CGGTCCGATT
*
713232 TTAGGCTGGGAATGAACT-TCGTATGC
1 TTAGACTGGGAATGAACTCT-GTATGC
713258 TTAGACTGGGAATGAACTCTGTATGC
1 TTAGACTGGGAATGAACTCTGTATGC
713284 CTGAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 23 0.96
27 1 0.04
ACGTcount: A:0.25, C:0.15, G:0.29, T:0.31
Consensus pattern (26 bp):
TTAGACTGGGAATGAACTCTGTATGC
Found at i:715874 original size:27 final size:28
Alignment explanation
Indices: 715836--715888 Score: 90
Period size: 27 Copynumber: 1.9 Consensus size: 28
715826 TCCGGTCCGA
*
715836 CTTAGACTGGGAA-TGAACTCCATATTG
1 CTTAGACTGGGAACGGAACTCCATATTG
715863 CTTAGACTGGGAACGGAACTCCATAT
1 CTTAGACTGGGAACGGAACTCCATAT
715889 GCCTAAGGTC
Statistics
Matches: 24, Mismatches: 1, Indels: 1
0.92 0.04 0.04
Matches are distributed among these distances:
27 13 0.54
28 11 0.46
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (28 bp):
CTTAGACTGGGAACGGAACTCCATATTG
Found at i:716280 original size:899 final size:878
Alignment explanation
Indices: 714109--721756 Score: 8826
Period size: 895 Copynumber: 8.6 Consensus size: 878
714099 GCGGTCCGAT
* * *
714109 CTTAAACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGAGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * *
714174 CGGCCAGAAGGGCGGGATGCACAAGTCGGGGATCGATCGGGTACCCCTCTACGAGCTGTCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAG-CGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* * * ** *
714239 TGCTGCCTCAACCTTCGGTCCAGTCTGATCTTAGACT-GGAATGAACTCCGTATGCCTAATCCAA
130 TGCTGCCGCAACCCTCAGTCC-GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
714303 CCGATGAAATGAGCGGTCGGACGGGCGGGCGGGCACTACGCCGACCAGAAAGACGGGATGCGCAA
194 CCGACG-AA--A-C-G--AG-CGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* *
714368 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGAATTCCAATGCCA
251 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
*
714433 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAATTTCATGGCAAGAC
316 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * ** ** * *
714498 GACTCGTTTTCTATTTTTTACGA-TTTTAAAAAATTTTACGGT--TGAGTTTTTAAAATTTTTTC
381 GACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTCAGGATTTTTTAAAATTTTTTC
* * * *
714560 GGAAGCA--TTTGGCCCC-AACTTGGTACACGTCATCCTTGTAGTTTTT-TTGGCGTGCAC--AA
446 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAA
714619 AAATTCAGCTAAAAACTCGAAGTGTA-AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
510 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
714683 AGACACTTTAATTGCTACTGGCAGC-AACCTGTAAAAATCTCAAATGCTCTTTAAGGGGTTGTGA
575 AGACACTTTAATGGCTACTGGCAGCAAACCTGT-AAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
714747 GTTTTCGCGGTTTGATG-TGGATAGGGGGCCAATATAACGGCCAAGTA-CAGCACCCCATCGTAC
639 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA-CCCATCGCAC
* ** * *
714810 ATCATGTGCGCACCACCCCCTTGG-CCCAGC-ATC-TCG----------G--G-CGAT--GCTT-
703 ATCATGTGCGCA-CACCCCC-CGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTC
* * * * *
714856 T-GGGCGATGGTGTCTCGACGAAGAAAAAT-CGGCACCAGCACATGCCCAAG-CCAGCATGTGCT
766 TCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA--TGCT
* * *
714918 GTCGC-AACCTCGATCCGGTCCGAT-TT-GACTGGGAATGAACTCCGTATG
829 G-CACAAACCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
714966 CTTAGATTGGGAATGAACTCCGTATGCGTAAGTCAACCCATGAAACGAGCGTGCGTGCGTTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * *
715031 CGGCCAGAGGGGCGGGATGCGTAAGCCGGGGATCGG-CTGGGTCCCCAACTGCGTACTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAG-CGGGGATCGGTC-GGGTCCCCCTCTGCGTGCTGCCGATC
* * ** ** * *
715095 CTGCTGTCGCAACCCT-TGATGGGTCTGATCTTATACTAGGAATGAACTCCGTATGCCTAAGCCA
129 CTGCTGCCGCAACCCTCAG-TCCGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
715159 ACTGACGAAACGAGCGGGCAAGCGGGCGAGCAGGCGGGCTGGCATTATGCCGGCCAGAGAGACGG
193 ACCGACG-AA--A-C--G--AGCGGGC--G--GGC--G--GGCACTACGCCGGCCAGAGAGACGG
* *
715224 GATGCGCAAGCCGTGGATCGATAGGGTGGCAGGTGGATTTAGGCACATCTTCATATTTCTGCATG
242 GATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
* *
715289 CCAAT-CCATTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCA
307 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
715353 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTCAGGATTTTTTAA
372 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGGTCAGGATTTTTTAA
* *
715418 AAATTTTTCGAAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
437 AATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT
* * * *
715483 GCACAAAAAATTTCAGCTAAAAACTCGAAGTGGAAAAGATTTTGTGACCATTTGGAAAAAGTGTC
502 GCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTC
*
715548 CCCATTTCAGACACTTTAATGGCTACTGGCAGAAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
567 CCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG
* * * * *
715613 GGTGTGGGTTCTTGAGGTTTGATGAGGGGTAGGGGGCCAATATAAGGGCCAAATACCAGCACGCA
632 GGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
* * * *
715678 TCACACATCATGTGCGCACACCCCTCCGGGCCCCTCGATCATCGAAACCCCAATGCCGTCGGTCA
697 TCGCACATCATGTGCGCACACCCC-CCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCA
* *
715743 GGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATACAGCACCAGCACATGCCCGAGCCCAGCAT
761 GGTTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCAT
* *
715808 GACTGCACAAACCTCTGGTCCGGTCCGA-CTTAGACTGGGAATGAACTCCATATTG
826 G-CTGCACAAACCTC-GGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTA-TG
* * * * * *
715863 CTTAGACTGGGAACGGAACTCCATATGCCTAAGGTCAAACCACAAAACGAGGCATACGGGCGGCT
1 CTTAGACTGGGAA-TGAACTCCGTATGCCTAA-GTCAACCCACGAAACGA-GCGTGCGGGC-GCT
** * *
715928 CAAACGAG-CAGAGGGGCGGGATGCGCAAGTCGGGGGATCGGATCGGGTTCCCCTCTACGTGCTG
62 CAGCCG-GCCAGAGGGGCGGGATGCGCAAG-C-GGGGATCGG-TCGGGTCCCCCTCTGCGTGCTG
* *
715992 CTGATCCTGCTGCCACCAACCCTCAGTCCGATGCCAATCTTAGACTGGGAATGAACTCCGTATGC
123 CCGATCCTGCTGCC-GCAACCCTCAGTCCG-T-CCAATCTTAGACTGGGAATGAACTCCGTATGC
* * * *
716057 CTAAATCCAACTGACGAAACGAGCGGTCGGGCAGGCGGGCGGGCCACTATGCCGGCCAAAGAGAC
185 CT-AAGCCAACCGACGAAACGA---G-C--G--GGCGGGCGGG-CACTACGCCGGCCAGAGAGAC
* * *
716122 GGGATGCTGCAAGCCGTGGACTCGA-AGGGTGGTAGGTAGGTTTAGGCCCATCTCCATATTTCTG
240 GGGATGC-GCAAGCCGTGGA-TCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTG
* *
716186 CATGCC-ATGCCATTTTTGTGGCTTGTAAA-TCATAC-ATGGTCCCTTAAGCCTTCACGTGATGT
303 CATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGT
* * * *
716248 TTCATGGCAAGACGACTCATTTTCTATTTTTCATGA-TTTTCAAGACTTTTT-TCGATTC-GGA-
368 TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAA-ACTTTTTGT-G-GTCAGGAT
* * *
716309 TTTTTAAAATTTTTTCGGGAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCGTTGTATTTTTG
430 TTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* *
716374 GTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAATA
495 TTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAA
*
716439 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCT
560 AAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCT
* ** * *
716504 TTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGTGAATAGAAGGGCCAAGTACTA
625 TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCA
* * *
716569 GCACGCATCGCACATCATGTGCACACACCGCCCCGGCCCCCCCGATCG-CCAGAA-CCCAATGCC
690 GCACCCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCCGATCGTCGA-AACCCCAATGCC
* * * *
716632 GCCATTCAGGTTCTCTGGCGATGCTCCGGCGATGGTGCCCC-ATCGAAGAAAAATGCGGCACAAG
753 G----TC-GG---TC-AG-G-TTCTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAG
* * ** *
716696 CACATGCCCGAGCCTAGCATG-TGCTATCGTAACCCTCAATCCGGTCCGATCTTAGACTGGGAAT
806 CACATGCCCGAGCCCAGCATGCTGC-A-C--AAACCTCGGTCCGATCCGATCTTAGACTGGGAAT
716760 GAACTCCGTATG
867 GAACTCCGTATG
* * *
716772 CTTAGACTGGGAATGAACTGCTTATGCCTAAGTCAACCCACGAAACGAGCAG-GCAGGCGCTCAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGC-GTGCGGGCGCTCAG
* *
716836 CCGGCCAGAGGGGCGAGATGCGCCAGTCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
65 CCGGCCAGAGGGGCGGGATGCGCAAG-CGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATC
** * * * *
716901 CTATTGCCGCAACCCTTAGTCCTGTCCGATCTTAGAATGGGAATGAACTCCGTATGCCTAAGGCA
129 CTGCTGCCGCAACCCTCAGTCC-GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* *
716966 ACCGACGAAATGAGCAGGCGGGCGGGCGAGCATTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
193 ACCGACGAAACGAGCGGGCGGGCGGGC-A-C--TACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
717031 GTGGATCGATAGGGTGGTAGGTGGGTTTACGAACATCTTCATATTTCTGCATGCCAATGCTATTT
254 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
*
717096 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGTCTTCACGTGAAGTTTCATGGCAAGACGAC
319 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * ** * * *
717161 TCATTTTCTATTTTTCACGATTTTAGAAACTTTTTACAGTTCGGGATTTGTTAAAATTTTTTCGG
384 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTT-GTGGTCAGGATTTTTTAAAATTTTTTCGG
* **
717226 AAGGAGTTTTGGCCCCAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGTGTGCACAAAAAAA
448 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
* *
717291 TTCAGCTAAGAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTTAGA
513 TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
** * **
717356 CACTTTCCTGGCTACTGGTAGCAAACCTGTAAAAAATCAAATGCTCTTTAAGGGGGTGTGAGTTC
578 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* * * *
717421 TCGAGGTTTGATGAGGGATAGAGGGCCAATATAAGGGCCAAGTAACAGCACCCACCACACATCAT
643 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* *
717486 GTGCACACACCCCCTCGGCCCCCCCGATCGTCAGAAACCCCCAATGCC-ACGGTCATTCTCCGAG
708 GTGCGCACACCCCC-CGGCCCCCCCGATCGTC-GAAA-CCCCAATGCCGTCGGTCA------G-G
* * * * *
717550 ATTTTACGACGATGGTG--CCGGCGAAGAAAAATACGGCACCAG-ACATTG-CCGAGCCTAGCAT
763 -TTCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACA-TGCCCGAGCCCAGCA-
* * *
717611 TGCTGTCGCAACCCTCGG-AC-ATCCGATCTTTAG-CT-GGAATGAACTCCGTATG
825 TGCTG-CACAAACCTCGGTCCGATCCGATC-TTAGACTGGGAATGAACTCCGTATG
** * * *
717663 CTTAGACTGGGCCTGAACTCCGTATGGCTAAGTC-A-CCACGAAA-GAGCGT-C-AG-TCTC-G-
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
717720 CGGCCGGAGGGACGGGATGCGCAAGCGGGGATCGACG-CGGGT-CCCCT-TGCATGCTG-CAAT-
66 CGGCCAGAGGGGCGGGATGCGCAAGCGGGGATCG--GTCGGGTCCCCCTCTGCGTGCTGCCGATC
* * * * * * *
717780 CTTCTG-CTCAA-CGTCCACT-CGTCTAAT-TTAGACTGGGTATGAA-T-TGTATGCCTAAGCCA
129 CTGCTGCCGCAACCCT-CAGTCCGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* ** ** *
717839 A-TG-C-AAACGAGCGGGC-ATC-GTTA--ACGTCGG-CAGAGAGACGGGACT-CAG-AAGCC-T
193 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA-TGC-GCAAGCCGT
* * *
717893 GGAATCGATAGCGTGGTA--T--GTTTAGGCACATCTTTCATATTTCTGCGTGGCAATGCCATTT
256 GG-ATCGATAGGGTGGTAGGTGGGTTTAGGCACATC-TTCATATTTCTGCATGCCAATGCCATTT
** *
717954 TTATGTTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGACGAC
319 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * *
718019 TCGTTTTTTATTTTTCACGATTTTCAAAACTTTTTGCGGTTCAGGATTTGTTAAAATTTTTTCGG
384 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGG-TCAGGATTTTTTAAAATTTTTTCGG
* *
718084 AAGGAGTTTTGGTCCCAAACTTGGTAGACGAGATCCTTGTATTTTTGTTGGCGA-GCACAAAAAA
448 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC-ATGCACAAAAAA
* *
718148 ATTCAGCTAAAAGCTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGCCCCCATTTCAG
512 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
718213 ACACTTTATTGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTCAAGGGGGTGTGAGTT
577 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
* * *
718278 CTCGAGGTTTGATGAGGGATAGGGGGCCAGTATAAGGGCCAAGTACCAGCTCCCATTGCACATCA
642 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* *
718343 TGTGTGCACAACCCCCC-GACCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGG
707 TGTGCGCAC-ACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCA--------GG
* * * * *
718407 TGATGCTCCGACGATGGTGCCCC-AGCAAAGAAAAATGTGGCACTAGCACATGCTCGAGCCTAGC
763 T--T-CTCCGACGATGGTGCCCCGA-CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC
* * * *
718471 ATG-TGCTACTGCAACCCTCGGTCTGATCCGATCTTAGACTGGGAAAGAACTCCATATG
824 ATGCTGC-A---CAAACCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
718529 CTTAGACTGGGAATGAATTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** ** * * * * *
718594 CGACCAGAGGGGCGAAACACGCAAGCCGGGATCGATCTGGTCCCCCGT-TGTGCGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCGGGGATCGGTCGGGTCCCCC-TCTGCGTGCTGCCGATCC
* *** * * **
718658 TGCTACCATTACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
130 TGCTGCCGCAACCCTCAGTCCG-TCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* *
718723 CCGACGAAACAAGCGGGCAGGCGGGCGGGCACTACGCCGGCCAAAGAGACGGGATGCGCAAGCCG
194 CCGACGAAACGAGC--G--GGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
718788 TGGATCGATCGGGTGGTAGGTAGGTTTAGGCACATCTTCATATATTCTGCATGCCAAGGCCATTT
255 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATAT-TTCTGCATGCCAATGCCATTT
* *
718853 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACATGAAGTTTCGTGGCAAGACGAC
319 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* *
718918 TCGTTTTCTGTTTTTCACGATTTTTGAAACTTTTTGTAGTTCAGGATTTTTTTAAAATTTTTT-G
384 TCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTGT-GGTCAGGA-TTTTTTAAAATTTTTTCG
* * * * *
718982 GAAGGATTTTTGGCCCAAAACTTGGTAGAAGAGATCCTTGTATTTTTTTTTGGCATGCACAAAAA
447 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTA-TTTTTGTTGGCATGCACAAAAA
* * * *
719047 AATTCAGGTAAAAACTCGAAGTGTATAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTTA
511 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
719112 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAGT
576 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* * *
719177 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGTGCCAAGTACCAACACACATCGCACATC
641 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
719242 ATGTCCGCACACCCCCCGGCCCCCCCGATCGTCGGAACTCCAATACCGTCGGACAGGTTCTCCGG
706 ATGTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGG---T----
* *
719307 CAATGCTCCGACGATGGTGCCCCAACGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCA-CA
764 ---T-CTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCA
* * *
719371 TG-TGCTATCACAATCCTCGGTCTGATCTGATCTTAGACTAGGAATGAACTCCGTATG
825 TGCTGC-A-CA-AA-CCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
719428 CTTAAACTGGGAATGAACTTCGTATGCCTAAGTCAACCCACGGAACGAGCATGCGAGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
719493 CGGCCAGAGGGGCGAGATGCGTAAGCCGGGGATCGGTCGGGTCCCCCTCTGTGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAG-CGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCC
* ** ** * *
719558 TGCTGCCACAACCCTTGGTTTGGT-CAGCTCTTAGACTGAGAATGAACTCCGTATGCCTAAGCCA
130 TGCTGCCGCAACCCTCAG-TCCGTCCA-ATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
719622 ATCGACGAAACGAGCGGGCGGGCGGGCACTATGCCGGCCAGAGAGACGGGATGCGCAAGCTGTGG
193 ACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGG
* *
719687 ATCGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATATTTTTGCATG-CAATTGCCATTTTTA
258 ATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA-TGCCATTTTTA
* *
719751 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTAATGGCAAGATGACTCG
322 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* *
719816 TTTTCTATTTTTCATGATTTTTGAAACTTTTTGTGGTTCAGGATTTTTTAAAATTTTTTGGGAAG
387 TTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGG-TCAGGATTTTTTAAAATTTTTTCGGAAG
* *
719881 GAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTTTATTTTT-TTGGCATGCACAAAAAAATTC
451 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
* *
719945 AGCTAAAAAATCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCGATTTCAGACAC
516 AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACAC
* *
720010 TTTAATTGCTACTTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGCGTGAGTTCTC
581 TTTAATGGCTAC-TGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
* * ** *
720075 AAGGTTTGATGAGGGATAAGGGGTGAATGTAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
645 GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
** * * *
720140 GCATACACCGCCCGG-CCCCCCGATCG-CCAGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTGA
710 GCGCACACCCCCCGGCCCCCCCGATCGTCGA-AACCCCAAT---GCC-GTC-GG---TCAGGT--
** *
720203 TGCTCCGACGATGGT-CCCTCGGTGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCAAG
764 T-CTCCGACGATGGTGCCC-CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGC-A-
* * * * * * *
720267 TGCTGCCGCAACCCTTGATCTGGTCCGATCTTAGACTGGAAATGAACTCCGTATG
825 TGCTG-CACAAACCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
720322 ATTAGACTAGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
720387 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGG-CCCTTCTCTGTGTGCTGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGC-GGGGATCGGTCGGGTCCC-CCTCTGCGTGCTGCCGATC
* *
720451 TTGCTGCCGCAACCCTC-GATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCG
129 CTGCTGCCGCAACCCTCAG-TCC-GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
720515 AACCGACGAAACTAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
192 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
720580 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
257 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * * *
720645 CGGTTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAAGTGAAGTTTCATGGCAAGAGGACTCG
322 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * ** * *
720710 TTTTCTATTTTTCACTATTTTTTAAACTTTTTACGGTTCGGGATTTTTTAAAATCTTTTT-AGAA
387 TTTTCTATTTTTCACGATTTTTGAAACTTTTTGTGG-TCAGGATTTTTTAAAAT-TTTTTCGGAA
*
720774 GGATTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
450 GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
* * *
720839 TAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCTCCA-TTCTAGAC
515 CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGAC
*
720903 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCCTTAAGGGGGTGTGAGTTCT
579 ACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCT
* * * * *
720968 C-AGGGTTTGATGAGGGTTAGGGAGCCAATCTAAGGGCCAAGTACCATCACCCATCGCACAACAT
644 CGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * *
721032 GTGTGCACACCCCCCGGCCCCCCCGATCGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCG
708 GTGCGCACACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCT-C--CG
* * *
721097 ATGCTCTGGCGATGGTGCCCCGGCGAAGAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCACA
770 A--------CGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAG--CA
* * * * *
721162 TGCTAC-CGTAACCCTCGGTCCAATCCAATCTTAGATTGGGAATGAACTCCGTATG
825 TGCTGCAC--AAACCTCGGTCCGATCCGATCTTAGACTGGGAATGAACTCCGTATG
* * *
721217 CTTACACTGGGAATGACCTCCGTATCCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
721282 CGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGG-CCCTTCTCTGTGTGCTGCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGC-GGGGATCGGTCGGGTCCC-CCTCTGCGTGCTGCCGATC
* *
721346 TTGCTGCCGCAACCCTC-GATCCGGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCG
129 CTGCTGCCGCAACCCTCAG-TCC-GTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
721410 AACCGACGAAACTAGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTG
192 AACCGACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTG
721475 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
257 GATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTA
* * *
721540 TAGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACCTGAAGTTTCATGGCAAGACGACTCG
322 TGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCG
* * *
721605 TTTTCTATTTTTCACGATTTTTGAAACTTTTTGTTGTTCGGGATTTTTTTAAATTTTTTCGGAAG
387 TTTTCTATTTTTCACGATTTTTGAAACTTTTTG-TGGTCAGGATTTTTTAAAATTTTTTCGGAAG
* **
721670 GAGTTTTGGCCCCAAACTTGGTAGATGTGATCCTTGTATTTTTAATGGCATGCACAAAAAAATTC
451 GAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTC
*
721735 AGCTAAAAACTCAAAGTGTACA
516 AGCTAAAAACTCGAAGTGTACA
721757 TCATTTGCGC
Statistics
Matches: 5877, Mismatches: 642, Indels: 506
0.84 0.09 0.07
Matches are distributed among these distances:
855 10 0.00
856 27 0.00
857 189 0.03
858 398 0.07
859 21 0.00
860 5 0.00
861 59 0.01
862 22 0.00
863 11 0.00
864 91 0.02
865 111 0.02
866 45 0.01
867 24 0.00
868 9 0.00
869 21 0.00
870 43 0.01
871 2 0.00
872 30 0.01
873 129 0.02
874 88 0.01
875 29 0.00
876 11 0.00
877 7 0.00
878 10 0.00
879 7 0.00
880 8 0.00
881 23 0.00
882 15 0.00
883 41 0.01
884 5 0.00
885 6 0.00
886 9 0.00
887 10 0.00
888 6 0.00
889 11 0.00
890 6 0.00
891 53 0.01
892 31 0.01
893 209 0.04
894 832 0.14
895 976 0.17
896 152 0.03
897 109 0.02
898 345 0.06
899 670 0.11
900 463 0.08
901 140 0.02
902 39 0.01
903 63 0.01
904 21 0.00
905 34 0.01
906 42 0.01
907 33 0.01
908 72 0.01
909 25 0.00
910 29 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (878 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCGGGGATCGGTCGGGTCCCCCTCTGCGTGCTGCCGATCCT
GCTGCCGCAACCCTCAGTCCGTCCAATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
GACGAAACGAGCGGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATC
GATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGC
TTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTT
CTATTTTTCACGATTTTTGAAACTTTTTGTGGTCAGGATTTTTTAAAATTTTTTCGGAAGGAGTT
TTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTA
AAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAA
TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTT
TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
ACCCCCCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCC
CCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGCTGCACAAACCTCGGTCCG
ATCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:718539 original size:26 final size:26
Alignment explanation
Indices: 718503--718555 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
718493 CTGATCCGAT
718503 CTTAGACTGGGAAAGAACTCCATATG
1 CTTAGACTGGGAAAGAACTCCATATG
* * *
718529 CTTAGACTGGGAATGAATTCCGTATG
1 CTTAGACTGGGAAAGAACTCCATATG
718555 C
1 C
718556 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAAAGAACTCCATATG
Found at i:719440 original size:26 final size:26
Alignment explanation
Indices: 719402--719454 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
719392 CTGATCTGAT
*
719402 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAAACTAGGAATGAACTCCGTATG
* *
719428 CTTAAACTGGGAATGAACTTCGTATG
1 CTTAAACTAGGAATGAACTCCGTATG
719454 C
1 C
719455 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTAGGAATGAACTCCGTATG
Found at i:720326 original size:26 final size:26
Alignment explanation
Indices: 720297--720347 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
720287 TGGTCCGATC
720297 TTAGACT-GGAAATGAACTCCGTATGA
1 TTAGACTAGG-AATGAACTCCGTATGA
720323 TTAGACTAGGAATGAACTCCGTATG
1 TTAGACTAGGAATGAACTCCGTATG
720348 CCTAAGTCAA
Statistics
Matches: 24, Mismatches: 0, Indels: 2
0.92 0.00 0.08
Matches are distributed among these distances:
26 22 0.92
27 2 0.08
ACGTcount: A:0.33, C:0.16, G:0.24, T:0.27
Consensus pattern (26 bp):
TTAGACTAGGAATGAACTCCGTATGA
Found at i:721949 original size:26 final size:26
Alignment explanation
Indices: 721920--721972 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
721910 TCAGTTCGAT
*
721920 CTTAGA-TCGGGAATGAACTTCGTATG
1 CTTAGACT-GGGAATGAACTCCGTATG
721946 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
721972 C
1 C
721973 CTAAGCCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
26 24 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:723607 original size:26 final size:26
Alignment explanation
Indices: 723556--723608 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
723546 CCGATCCGAT
* *
723556 CTTAGACTGGGAATGAACTCTATATG
1 CTTAGACAGGGAATGAACTCCATATG
*
723582 CTTAGACAGGGAATGAACTCCGTATG
1 CTTAGACAGGGAATGAACTCCATATG
723608 C
1 C
723609 CTAAGCCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACAGGGAATGAACTCCATATG
Found at i:724484 original size:26 final size:26
Alignment explanation
Indices: 724455--724507 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
724445 CTAGTCCGAT
724455 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
724481 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
724507 C
1 C
724508 CTAAGCCAAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:724902 original size:890 final size:892
Alignment explanation
Indices: 721946--728950 Score: 8907
Period size: 898 Copynumber: 7.8 Consensus size: 892
721936 ACTTCGTATG
*
721946 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCAGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* *
722007 CACTACGCCGGCAAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGATGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
722072 GCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
722137 TTAAGCCTTCACGTGAAGTATT-ATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAA
196 TTAAGCCTTCACGTGAAGT-TTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAA
* * *
722201 CTTTTTGCGGTTCGAGATTTTTTAAAATTTTTTCGGAACGATTTTTGGCCCCAAACTTGGTAGAC
260 CTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGAC
* *
722266 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAAAACTCGAAGCGTACAAGAT
324 GTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA-
*
722331 TTTGTGACCATTTGAAAAAAGTGTCTCCA-TTCTAGACACTTTAATGGCTACTGGCAGCAAACCT
388 TTTGTGACCATTTGAAAAAAGTGTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCT
*
722395 GTAAAATCTCAAATGCTCCTTAAGGGGGTGTGAGTTCTC-AGGGTTTGATGAGGGATAGGGAGCC
452 GTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGG-GCC
* * * *
722459 AATCTAAGGGCCAAGTACCATCACCCATCGCACAACATGTGTGCACACCCCCCGGCCCCCCCGAT
515 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-CCCCCCGAT
* *
722524 CGTCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGCGATGCTCTGGCGATGGTGCCCCGGCGAA
579 CGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAA
* * ** * * ** *
722589 GAAAAATGTGGCACCAGCACATGCTCGAGCCCAGCACATGCTACCGTAACCCTCGGTCCAATCCA
644 GAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCG
* * *
722654 ATCTTAGATTGGGAATGAACTCCGTATGCTTACACTGGGAATGAACTCCGTATCCCTAAGTCAAC
709 ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
* *
722719 CCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGTAGGATGCGCAAGCC-GAGGATCGG
774 CCACGAAACGAGCGTAC-GGCG--CAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAG-GGATCGG
* * * * * *
722783 TCAGGTCCCTCTTTCCGTGCTGTCGAT-CTGGCT-ACAGCAACCCTCGGTCCGGTCTGAT
835 TCGGGTCCCACTCTCCGTGCTGCCGATCCT-GCTGCCA-CAACCCTCGGTCCGGTCCGAT
* * * **
722841 CTTAGACTGGGAATGAACTCCATATGCCTAAGCCAACCGATGAAACGAGAGGGCGGGCGGATGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * *
722906 CACTGCGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGAAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAG
* *** **
722971 GCACGTCTTCATATTTCTATGTGCCAATGCCA-TTTTATGGCTTGTAAATTCATACAATCATCCC
131 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* ** *
723035 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTGTTCACGATTTTCAAAAA
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
* * * * *
723100 TTTTTGTGGTTTGGGATTTTTTAAAATTTTTTTGAAAGGAGTTTTGCCCCCAAACTTGGTAGATG
261 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG-AAGGAGTTTTGGCCCCAAACTTGGTAGACG
* *
723165 TGATCCTTGTATTTTTGTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAAGCGTACAAGATT
325 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA-T
* * *
723230 TTGTGACTATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGACAGCAAACCTGT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
*
723295 AAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAAT
* *
723360 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCACCTCCTGACCCCCCAATC
518 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CC-CC-GGCCCCCCGATC
* * * ** *
723425 GCCGGAACCACAATGCCGCCAGTCAGGTTCTCCGGCGATGCTCCGGTAATGGTGCCCTGGCGAAG
580 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAG
* * *** * *
723490 AAAAATGCGGCACCAGCACATGCTCGAACCCAGCATGTGCTATTGCAACCCTCGATCCGATCCGA
645 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA
** * *
723555 TCTTAGACTGGGAATGAACTCTATATGCTTAGACAGGGAATGAACTCCGTATGCCTAAGCCAACC
710 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* * * *
723620 CACGAAACGAGCGTGCAGTCGCTCAGCCGGCCAGCGGGGCAGGATGCACAAGCCAGGGATCGGTC
775 CACGAAACGAGCGTAC-G--GCGCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTC
* * * ** * * * *
723685 GGATCCTATTCTGTGTGCTGCCGATCCTGCTGCCGCAACCCTCGGTCAGATCTGAT
837 GGGTCCCACTCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGAT
* * *
723741 CTTAGACTAGGAATGAACTCTGTATGCCTAAGCCAACCGACGAAACGAGCGAGCGGGCGGATGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC----GGG
* * * *
723806 CGGGCACTACGCCGGCCAGAGAGATGGGATGTGCAAGCCATGGATCAATAGGGTGGTAGGTGCGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
*** * * *
723871 TTAGGCACATCTTCATATTTCTGCGCACCAATGCCATTTTTGTGGCCTGTAAATTCATATAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * *
723936 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGGCGACTGGTTTTTTATTTTTCACGATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * *
724001 AAACATTTTGCGGTTCGGGATTTTTGAAAATTTTTTCAGGAGTAGTTTTGGCCCCAAACATGGTA
257 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTA
* *
724066 GACGTGATCCTTGTATTTTTGTTGCCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACGA
321 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
*
724131 GA-TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATCGCTACTGGCAGCAAACC
386 GATTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
* * * *
724195 TATAAAATCTCAGATGCTCTTTAAGGTGGTGTGAGTTCTCGAGGTTTGATGAGGGTTAGAGGGCC
451 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG-GGGCC
*
724260 AATATAAGGACCAAG-ACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
515 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
* * ** * * * * **
724324 GCCAGAACCCCAATGCCGTTGGTCAGGTTCTCCGGTGATGCTCCGACGATAGTGCCTCGGTAAAG
580 GTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAG
* * **
724389 AAAAATACGGCACCAGCACATGCCCGAGCCCAGCAAGTGCTGCCGCAACCCTCGGTCTAGTCCGA
645 AAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGA
*
724454 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACC
710 TCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACC
* *** *
724519 AACGAAACGAGCGTACGG-G-AGCCGGCCAGAGGGGCAGGATGCGCAAGTTGGGGATCGGTCGGT
775 CACGAAACGAGCGTACGGCGCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTCGGG
** * *
724582 TCCCACTCTCCGTGCTATCGATCCTGCTGCCACAACCATCGGTCCAGTCCGAT
840 TCCCACTCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGAT
* * * *
724635 CTTAGACTGGGAATGAACTTCGTATCCCTAAGCCAACCGACAAAACTAGCGGGCGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* * * * *
724700 CACTATGCCGACCAAAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAG
* *
724765 GCACATCTTCATATTTCTGCATGCCAATGCCGTTTTTATGGATTGTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
* *
724830 TTAAGCCTTCACGTGAAGTTTCGTGGCAAGAGGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
* * * * * *
724895 TTTTTGCGGTTCGAGATCTCTAAAAATTTTTTCGAAAGGAGTTTTCGCCCCAAACTTGATAGACG
261 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCG-AAGGAGTTTTGGCCCCAAACTTGGTAGACG
* * *
724960 TGATCCTTTTTTTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAGGATT
325 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA-T
* * *
725024 TTGTGACCATTTGAAAAAGGTGTCCCCATTTCAGACACTTTAATGGCTATTGGTAGCAAACCTGT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* * * *
725089 AAAATCTCAAATGCTCTTTAAGGGGGTGCGAGTTCTCAAGGGTTGATGAGGGGTAGGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA-GGGGCCAAT
*
725154 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGAGCACACCCCCCCGGTCCCCCCGATCG
518 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGG-CCCCCCGATCG
* * * *
725219 CCGGAACCCCAATGCCGCCAGTCAGGTTCTCCGACGATGCTCATGCTCCGGCGATGGTGCCCCGA
581 TCGGAACCCCAATGCCGCCGGTCAGGTTCT-C--CG--GC-GATGCTCCGGCGATGGTGCCCCGG
* * * * * * *
725284 CGAAGAAAAATACGGTACAAGCACATGCTCAAGCCCAGCATGTGCTGTCGCAACCCTCGGTCTGG
640 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* * * *
725349 TCCAATCTTAGACTGCGAATGAACTCCGTATACTTAGACTGGGAATGAACTCCGTATGCCTATGT
705 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
** * * *
725414 CAACCCACGAAACGAGCGTGTGAGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAG-CTGGGAT
770 CAACCCACGAAACGAGCGTACG-GCG--CAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGAT
* * * * * * * ** *
725478 TGGCCGGGTCCCCCTCTGCGTGTTGCCGATCCTGTTGCCACAACCCTTGGTCTAGTTCGAT
832 CGGTCGGGTCCCACTCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGAT
* * *
725539 CTTAGACTGGGAATGAACTCC-TATGCCTAAGCCAAACGACGAAACGACCGGGTGGGCGGGCGAG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGCGGG
* * * *
725603 CGGGCACTACGCCGGCCAGAAAGACGGGATGCGCAAGTCATGGATCAAAAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
* **
725668 TTAGGCACATCTTCATATTTTTGTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* * * *
725733 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGATTTGTTTTCTATTTTTCATGATTTTTT
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * * * *
725798 AAACCTTTTGAGGTTTC-GGATTTTTTTAAATTTTTTTTGAGGGAGTTTTGGCCCCAAACTTGGC
257 AAACTTTTTGCGG-TTCGGGA-TTTTTTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGT
* * * *
725862 AGACCTGATCCTTGTATTTTTGTTGGCACGCACGAAAAAATTCAGCTAAAAACGCGAAGTGTACA
320 AGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
*
725927 AGATTTTGTGACCAATTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
385 AGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
725992 CCTGTAAAATCTCAAATGCTCATTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAAGGGG
449 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGAT-AGGGG
* * *
726057 CCAATATGAGGGCCAAGTACCAGCACCCATCACACATTATGTGCGCACAGCCCCCCCGGCCCCCC
513 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA--CCCCCCGG-CCCCC
* * * * *
726122 CGATCGTCAGAACCCCAATACCACCGGTCAAGTTCT-C--C-A-------GCGATGGTGCCCCGA
575 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGG
* * * *
726176 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGGCCAGCATGTGCTGCCACAACCCTCGATCTGG
640 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* * ** *
726241 TTCAATCTTAGACTGGGAATGAACTCAATATGCTTAGACTGGGAGTGAACTCCGTATGCCTAAGT
705 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * * * *
726306 CAACCCACAAAACGAGCATGCGGGCGTTCAGCCGGCCAAAGGGACAGGATGCGCAAGCCAGGGAT
770 CAACCCACGAAACGAGCGTAC-GGCG--CAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGAT
* * * * * * *
726371 CGGCCGGATCCCCCTCTACGTGTTGCCGATCTTGCTGCTACAACCCTCGGTCCGGTCC-AGT
832 CGGTCGGGTCCCACTCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGA-T
* * *
726432 CTTAGACTGGGAATGAACTCCGTATGCCTGAGCCAACCGACGAAACGAGCGGACGGGCAGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
* ** * *
726497 CACTACGCCGGCCAGAGAAATAGGATGCGCAAGCCGTTGATCGATAGGGTGGTAGGTGGGTTTAG
66 CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAG
*
726562 GCACATCTTCATA-TTCTGCATGCCAATGCAATTTTTATGGCTTGTAAATTCATACAATGGTCCC
131 GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
*
726626 TTAAGCCTTCACTTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
196 TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
* * * **** * *
726691 TTTTTGCAGTTTGGGATTTTTTAAAATTTTTTCAGAAGGTGTTTTGGCTTTGAACATGGTAGATG
261 TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGACG
*
726756 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGATGTGTACAAGATT
325 TGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGA-T
* *
726821 TTGTGACCATTTGAAAAAAGTGT-CCCATTTTAGACACTTTAAAGGCTACTGGCAGCAAACCTGT
389 TTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGT
* *
726885 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGCTTTGATGAGGGATTGGGGGCCAAT
454 AAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGA-TAGGGGCCAAT
**
726950 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCAACCCCCCCGATCG
518 ATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC-GGCCCCCCGATCG
** * **
727015 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGGGGCTGA
581 TCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGA
* * * * *
727080 AAAATACGGCACCAACACATGCCCGAGCACAGCATGTGCTACCGTAACCCTCGGTCCGGTCCGAT
646 AAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGAT
* *
727145 CTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGAAATGAACTCCGTATGCCTAAGTCAACCC
711 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* ** * *
727210 ACG-AACGAGCGTGCGGCTGCTCAGTAGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGGTCG
776 ACGAAACGAGCGTACGGC-G--CAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTCG
* * * * * *
727274 GGGCCCCCTCTGCGTGCTGCCAATCCTGCTGCCGCAACCCTCGGTCTGGTCCGAT
838 GGTCCCACTCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGAT
727329 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGATCGGACGGGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-CGGGCGGGCGGG
*
727394 CGAGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
* *
727459 TTAGGCACATCTTCATATTTCTACATGCCAATGCCATTTTTATGGCCTGTAAATTCATACAATGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
* *
727524 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCAGGATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* *
727589 AAACTTTTTGCGCTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
257 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTA
* * * * * *
727654 GATGTGATCCTTGTACTTTTGTTGGCATGCACAAAACAATTTAGCTAAAAACTCAAAATGTACAA
321 GACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * *
727719 GATTTTGTGACCCATTTG-AAAAAGTGTCCCTATTTTAGAC-CTTTAATGGCTACTGGCAGCATA
386 GA-TTTGTGA-CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* * * *
727782 CCTGTAAAATCTCAGTATGGCTCCTTAA-GGGGTGTGGGTTCTTCCAGG-TTGATG-GGGATAGG
449 CCTGTAAAATCTCA-AAT-GCTCTTTAAGGGGGTGTGAGTTC-TCGAGGTTTGATGAGGGATAGG
* * *
727844 GGCCAATATAAAGTGCCAAGTACCTAGCACCCAAC-AACATCA-GT-CGCACA-CCCCCGGCCCC
511 GGCCAATAT-AAGGGCCAAGTACC-AGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCC
** * * * * **
727905 GCCGATCGTC---ACATCAATG-TGTCGGTCAGGTT-TCCGACGATGCTTCAACGATTGGTG-CC
574 -CCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGA-TGGTGCCC
* * * * *
727964 CGGAG-A-AAAAATGTGGCACCTAGCA-ATG-TCGAGCGCCCA-CAATGTGCTGTCACAA--C-C
637 CGGCGAAGAAAAATGCGGCACC-AGCACATGCCCGA--GCCCAGC-ATGTGCTGCCGCAACCCTC
* * * * * *
728021 AGTCCCGGTCCTATCATAGAATGGGAATGAACGCCCGTATGCTTATACT-GGAATGGGAACTCCG
698 GGT-CCGGTCCGATCTTAGACTGGGAATGAAC-TCCGTATGCTTAGACTGGGAAT--GAACTCCG
* *
728085 TAAGCCCTAAGTC-ACCCACGAAAACGAGCGTACGGGTGCTTAAGCCGGCCCAGA-GGGC-GGAT
759 TATG-CCTAAGTCAACCCACG-AAACGAGCGTAC-GGCGC---AGCCGG-CCAGAGGGGCAGGAT
* ** *
728147 TCGCAAGCCAGGGATCGACCGGGT--CAC-C-CC---CTG-C-ATGCTGCTG---CAACCCTCGG
817 GCGCAAGCCAGGGATCGGTCGGGTCCCACTCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGG
* *
728200 TTCGGTCCAAT
882 TCCGGTCCGAT
*
728211 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGTGGGCAAGCGGGCGGG
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAG-CGG---GCGGGCGGG
* * ** *
728276 CGGGCACTACGTCGGCCAGAGAAACGGGATGCGCAAGCCGCGGATCGATAGGGTTGTAGGTGGGT
62 CGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGT
*
728341 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGG
127 TTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGG
728406 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTA-TTTTCACGATTTTTG
192 TCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * *
728470 AAAC-TTTTACGGTTC-AGAATTTTTAAAATTTTTTCGAAGAAGTTTTGGCCCCAAATCTT--TA
257 AAACTTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAA-CTTGGTA
* * *
728531 GACGTGATATCCCTTGTA-TTTTCTTGGCATGCACAAAAAAATTCAGCT-AAAACTTGAAGCGTA
321 GACGTG--AT-CCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTA
* *
728594 CAAGATTTTGTGACCATTTG-AAAAAGTGTCCCCATTTCAGACACTTTAATTGCTACTGGCAACA
383 CAAGA-TTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
* *
728658 AACCTATAAAATCTCAAATGCTCTTTAAGGGCGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
447 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* *
728723 AGCCAATATAAAGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGACCCCCC
512 -GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG-GCCCCC
* * *
728788 CGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGG
575 CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGG
* * * * *
728853 TGAAGAAAAATGCGACACCAGCACATGCCCGAGCCTAGCATGTGCTGTCACAACCCTCGGTCCGG
640 CGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGG
* *
728918 TCCGATCTCAGACTGGGAATGAACTCCATATGC
705 TCCGATCTTAGACTGGGAATGAACTCCGTATGC
728951 CTAAGTCAAC
Statistics
Matches: 5335, Mismatches: 642, Indels: 273
0.85 0.10 0.04
Matches are distributed among these distances:
876 13 0.00
877 62 0.01
878 103 0.02
879 64 0.01
880 22 0.00
881 32 0.01
882 248 0.05
884 7 0.00
885 24 0.00
886 24 0.00
887 70 0.01
888 180 0.03
889 285 0.05
890 377 0.07
891 159 0.03
892 246 0.05
893 114 0.02
894 241 0.05
895 64 0.01
896 9 0.00
897 148 0.03
898 510 0.10
899 302 0.06
900 488 0.09
901 109 0.02
902 333 0.06
903 199 0.04
904 175 0.03
905 224 0.04
906 1 0.00
907 249 0.05
908 208 0.04
909 45 0.01
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (892 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGG
CACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAG
GCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCC
TTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAAC
TTTTTGCGGTTCGGGATTTTTTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGT
GATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTT
GTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAA
AATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGCCAATATA
AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGA
ACCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGGCGATGGTGCCCCGGCGAAGAAAAAT
GCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCCGATCTTAG
ACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
ACGAGCGTACGGCGCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCAGGGATCGGTCGGGTCCCAC
TCTCCGTGCTGCCGATCCTGCTGCCACAACCCTCGGTCCGGTCCGAT
Found at i:725394 original size:26 final size:26
Alignment explanation
Indices: 725355--725405 Score: 93
Period size: 26 Copynumber: 2.0 Consensus size: 26
725345 CTGGTCCAAT
725355 CTTAGACTGCGAATGAACTCCGTATA
1 CTTAGACTGCGAATGAACTCCGTATA
*
725381 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGCGAATGAACTCCGTAT
725406 GCCTATGTCA
Statistics
Matches: 24, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.29, C:0.22, G:0.22, T:0.27
Consensus pattern (26 bp):
CTTAGACTGCGAATGAACTCCGTATA
Found at i:727185 original size:26 final size:26
Alignment explanation
Indices: 727145--727197 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
727135 CCGGTCCGAT
* *
727145 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
727171 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
727197 C
1 C
727198 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:729192 original size:159 final size:159
Alignment explanation
Indices: 728903--729297 Score: 506
Period size: 159 Copynumber: 2.5 Consensus size: 159
728893 TGTGCTGTCA
* * * * *
728903 CAACCCTCGGTCCGGTCCGATCTCAGACTGGGAATGAACTCCATATGCCTAAGTCAACCTATGAA
1 CAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
* *
728968 ATGAGCGTACGGGCGATCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGAGATCGACTGGGTCC
66 ACGAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGAGATCGACTGGGTCC
* *
729033 CCCTCTGCATGCTGTCGATCCTGCTACCG
131 CCCTCTGCATGCTCTCGATCCTACTACCG
* * *
729062 CAACCCTCGGTCTGGTTCGATATTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAA
1 CAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
* * ** * * * *
729127 ACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGTGGGATGCGTAAGTCGGGGATCG-GTCGGGTC
66 ACGAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGAGATCGACT-GGGTC
* *
729191 CCCCTCTGCGTGCTCTCGATCCTACTATCG
130 CCCCTCTGCATGCTCTCGATCCTACTACCG
* * * * *
729221 TAACCCTCGGTCTGGTCCAATCTTAGACTT-GGAATGAACTCCGTATGCCTAAGCCAACCGATAA
1 CAACCCTCGGTCTGGTCCGATCTTAGA-TTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGA
*
729285 AACGAGCGGGCGG
65 AACGAGCGTGCGG
729298 CGGGCACTAC
Statistics
Matches: 203, Mismatches: 31, Indels: 4
0.85 0.13 0.02
Matches are distributed among these distances:
158 1 0.00
159 200 0.99
160 2 0.01
ACGTcount: A:0.22, C:0.29, G:0.29, T:0.20
Consensus pattern (159 bp):
CAACCCTCGGTCTGGTCCGATCTTAGATTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAA
ACGAGCGTGCGGGCGATCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGAGATCGACTGGGTCC
CCCTCTGCATGCTCTCGATCCTACTACCG
Found at i:731367 original size:26 final size:26
Alignment explanation
Indices: 731338--731390 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
731328 CTGGTCCGAT
* *
731338 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAAATCCGTATG
731364 CTTAGACTAGGAATGAAATCCGTATG
1 CTTAGACTAGGAATGAAATCCGTATG
731390 C
1 C
731391 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.19, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAAATCCGTATG
Found at i:733901 original size:26 final size:26
Alignment explanation
Indices: 733859--733911 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
733849 CTGGTCTGAT
733859 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
* *
733885 CTTAGACTGGGATTGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
733911 C
1 C
733912 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:734790 original size:26 final size:26
Alignment explanation
Indices: 734754--734806 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
734744 CCGGTTCGAT
*
734754 CTTAGACTGGGAATGGACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
734780 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
734806 C
1 C
734807 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:734854 original size:893 final size:896
Alignment explanation
Indices: 732023--740527 Score: 5975
Period size: 893 Copynumber: 9.3 Consensus size: 896
732013 ATTTGCCCCT
*
732023 GAGCCCAGCCATGTGCTGTC-CAACCCTC--TCCGGTTCGATCTTAGACTAAGAATGAAACTCCA
1 GAGCCCAG-CATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATG-AACTCCA
* * * *
732085 TATGTTTAGTCTGGGAATGAACTCCGTA-ACCTAAGTC-ACCCACG-AACGAGCGTACGGGCGGC
64 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GC
* * * *
732147 TCAACCAAGCCAGAAGGGC-AGAT-CGCAAGCCAGGGATCTG-TC-GGTCCCCCTCCTAGTCGTG
128 TCAACC-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCCCCCT-CT-G-CGTG
* * * * * *
732208 CTGTCGATCCTACTGCCACAAACCTCGGTCCGGTCCGATCTTTGACTGGG-ATGAACTCCGTATG
188 CTGCCGATCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
** * *
732272 CCTAAG-CAACCTGACGAACGAGCGGGCGGCGGGGCGGGCA-TTTGTCGGCCAAAGAGGACGGGA
253 CCTAAGCCAACC-GACGAACGAGC-GGCGGC-GGGCGGGCACTACGTCGACCAGAGA-GACGGGA
*
732335 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTAGGCACATC-TCATATTTC-AGCATG
314 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCTA-TATG
* *
732398 CC-ATG-CATTTTTATGGCTTGTAAATTC-CACAATGGTCCCTT-AGCCTCCACGGTGAAGTTTC
377 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTC
* * *
732459 ATGGCAAGCACAACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGC-GTTGGGGA-TTTT
441 ATGGCAAG-ACAACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTT
* * *
732522 TAAAATTTTTTTGGAAGCAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
505 TAAAATTTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
732587 CATGCACAAAAAAATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGT
570 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
*
732652 GTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
635 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
732717 GGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCAC
700 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * *
732782 CCATCACACATCATGTGCGCACACCACCCCGGCCCCCTCGATCGTCGGAACCCCAATGCCACTGG
765 CCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGCCGG
* * * *
732847 TCAGGTTCTCCGGTGATGCTCCGACGATGCTCTGGCGATGGTGCCCTGGTGAAGAGAAATGCGGC
829 TCAGGTTCTCCGGCGATGCT-C--C-A-------GCGATGGTGCCCCGATGAAGAAAAATGCGGC
* *
732912 ACCAACACATGCTC
883 ACCAGCACATGCCC
* * * *
732926 GAGCCCAGCATGTGCTGTCGCAACCCTCGATCCGATCCGATCTTAGACTAGGAATGAACTCCGTA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
* *
732991 TGCTTAGACTGGGAATGAACTCTC-TATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGCGCTC
66 TGCTTAGACTGGGAATGAACTC-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * ** * ** * **
733055 AGCCGACCATAGGGGCGGGATGCATAAGTCGGGGATCGGCCGGGTCCCCCTCTGTGTGCTTTCGA
130 AACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA
* * * * * *
733120 TCCTGCT--------GCT-GGTTCGGTCCAATCTTAGACTAGGAATGAACTCCGTGTACCTATGC
195 TCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
733176 CGACCGACGAAACGAGCGAGCGGGCGGGCGGGTGGGCACTATG-CCAGCCAGAGAGACAGGATGC
260 CAACCGACG-AACGAGCG-GC-GGCGGGC----GGGCACTACGTCGA-CCAGAGAGACGGGATGC
* * *
733240 GCAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGTCACATCTTCATATTTCTCTATGCCAAT
317 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATATGCCAAT
* *
733305 GCCATTTTTATGGCTTGTAAATTTATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
382 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* **
733370 AGACAACTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTACGGTTCGGGATTTTTT-AAATT
447 AGACAACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * * * * *
733433 TTTTTGGAAGGATTTTTGGCCCCCAGAGTTGGTAGAC-TGGATCCTTGTATTTTTGTTTGCCTGC
512 TTTTTCGAAGGAGTTTTGG-CCCCAAACTTGGTAGACGT-GATCCTTGTATTTTTGTTGGCATGC
* * *
733497 AC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAATATTTTCTGACCATTTTAAAAAAGTGTCCC
575 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
733561 CATTTCAAACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGG
640 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
733626 TGTGAGTTCTCAAGGTTTGATGGGGGATA-GGGGCCAATATAAGGGCCAAGTACTAGCACCCATC
705 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* * * *
733690 GCACATCATGTGCGCACACCCCCCCGGCCCCTTCGATCACCGGAAGCCCAATGCCGCCGATCAGG
770 GCACATCATGTGCGCACA-CCCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGCCGGTCAGG
* * * *
733755 TTCTCCGGCGATGCTCC-GATGATGGTGCCCC-AGCGAAGAAAAATGTGGCACTAGCACATGCCC
834 TTCTCCGGCGATGCTCCAG-CGATGGTGCCCCGA-TGAAGAAAAATGCGGCACCAGCACATGCCC
* * * *
733818 AAGCCCAGCATGTGCT-ACTGCAACCCTCGGTCTGG-TCTGATCTTAGACTAGGAATGAACTCCG
1 GAGCCCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTTC-GATCTTAGACTAGGAATGAACTCCA
* * * *
733881 TATGCTTAGACTGGGATTGAACTCCGTATGCCTAAGTCAACCCCACGGAACGAGCGTGCGAAGCC
64 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CCCACGAAACGAGCGTGCG-GGCG
* * * * *
733946 CTTAACCGACCAGAGGGGCAGGATGCGCAAGCCGGGGAACGATCGGGTCCACCTCTGCGTGCTGC
127 CTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC
* * *
734011 CGATCCTGCTACCACAACCCTCGGTTCGGCCCTAACTTAGACTGGGAATGAACTCCGTATGCCTA
192 CGATCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
734076 AGGCAACCGACG-TC-A-C-GC-GCGGGCGAGCATTACGTCGACCAGAGAGACGGGATGCGCAAG
257 AGCCAACCGACGAACGAGCGGCGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAG
* * *
734136 CCGTGGATCGATAGGGTGGTAAGTGGGTCTAGGCACATCTTCATATTTCTATGTGCCAATGCCAT
322 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATATGCCAATGCCAT
* * * *
734201 TTTTACGGCCTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCGTGGCAAGATC
387 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA-C
* * * **
734266 -GCTCATTTTCTATTTTTCATAATTTTCAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTTTT
451 AACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
*
734330 TCGAAGGAGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
516 TCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* *
734395 AAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTC
581 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* * *
734460 AGACACCTTAATGGCTACTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
646 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* * *
734525 TTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCCTCGCACAT
711 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * *
734590 CATGTGCGCACACTCCCCCTGGCCCCCACGATCATCGGAACTCCAATGTCGCCGGTCAGGTTCTC
776 CATGTGCGCACAC-CCCCC-GGCCCCCTCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * *
734655 CGGTGATGCTCCAGCGATGGTACCCCGATGAAGAAAAATGCGACACCAGCACATGCAC
839 CGGCGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
** * * * *
734713 GAGCCCAATATGTGCTGGCACAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGGACTCCATA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
* *
734778 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGTGCGGGCGCTCA
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * *
734843 GCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGAT
131 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
*
734908 CCTGCTACCACAACCCTCGGTTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
196 CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * * *
734973 AACTGACAAAATGAGCGGGTGGGCGGGTGGGCACTACATCGGCCAGAGAGACGGAATGCGCAAGC
261 AACCGAC-GAACGAGC-GG-CGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGC
* **
735038 CGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
323 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATATGCCAATGCCATT
* *
735103 TTTATGGCTTGTAAACTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
388 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAA
*
735168 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTTAAAA-TTTCTT
453 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTT
** * *
735232 CGGAAGGAGTTTTCACCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCAAAAAA
517 C-GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * * *
735297 AAATTCAGCTAGAAACTCGAAGTGTACAATATTTTGTAACCATTTGAAAAAAGTGTCACCATTTC
581 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
* *
735362 AGGCACTTTAATGGCTACTGGCAGTC-AACCTGTAAAATCTCAAATGCTATTTAAGGGGGTGTGA
646 AGACACTTTAATGGCTACTGGCAG-CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
735426 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-CCTCATCGCAC
710 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC-CATCGCAC
* * * * *
735490 ATCTTGTGTGCATACCGCCCCCGGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCAGTCAGGTT
774 ATCATGTGCGCACA-C-CCCCC-GGCCCCCTCGATCATCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * * *
735554 CTCCGACGATGCTTCGGCGATGGTGCCCTGGTGAAGAAAAATGTGGCACCAGCACATGCCC
836 CTCCGGCGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
* * * * *
735615 GAGCCTAGCATGTGCTGTCGCAACCCTCTGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATT
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
* * * * *
735680 TGCTGAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAGGAAACGAGCGGGTGGGCACTCA
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * *
735745 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTGCATGCTGCCGAT
131 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * * *
735810 CATACTGCCACAACCCTCGGTCCGGTCTGATCATAGACTGGGAATGAACTACGTATGCCTAAGCC
196 CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * * * *
735875 AACCGATGAAACGAGCGGGTGGGTGGGTAGGCGGGCACTACGCCGGCCAGAGGGGCGGGATGCGC
261 AACCGACG-AACGAGC--G-GCG-GCG--GGCGGGCACTACGTCGACCAGAGAGACGGGATGCGC
* * * *** ** * * *** *
735940 AAGCTGGGGATTGGCCGGGTCCCCCTCTGCGTGCTGTCGATCCTGCTACCATAACCCTCAGTTTA
319 AAGCCGTGGATCGATAGGGT---GGT-AG-GTG--G--GTTTAGGC-A-CAT---CTTCA---TA
* ** * *** ** * **** * ** * ***
736005 GTTTGATCTTAGACTGGGAATG-AACTCCGTATACCTTAGCCGACCGACGAAACGAGCGGGCGGG
367 --TT--TC-TATA-TGCCAATGCCA-TTTTTATGGCTT-G--TAAATTC-ATAC-AATGGTCCCT
*** *** * * * **
736069 CGGGCAC-T-ACGCTGCCAGAGAGACGGGATGCGCAAGCCGTGGA-TCGATAGCGTGGTAGGTGG
420 TAAGC-CTTCACG-TG--A-AGTTTC---ATG-GCAAGAC---AACTCG-T---TTTCTA--T--
* * * * * ** *** ** * *
736131 GTTT-AGGTAGATCTTC-ATA-TTTCTAC-GTGC-CAATGCCATTTTTATGGCTTGTAAATACAA
465 TTTTCA--T-GATTTTCAAAACTTTTTACGGTTCGGGAT----TTTTTA-AAATT-T-TTTTCGA
** ** * ** *
736191 ACAATGGTCCCTTAAGCCCTC--ACTTGAAGTTTCATGGCAAGA-CGACTTGT-TTTCTAT-TTT
520 AGGA--GT---TTTGGCCC-CAAACTTG--G--T-A-GACGTGATC--CTTGTATTT-T-TGTTG
* *** * * * **** * * * ** * * ** * * *
736251 TCATG-ATCTTTGAAACTT---TTTACGGTTCGGGATTTTTTAAAATTTT-T--TCGGTAG-GAG
569 GCATGCA-C-AAAAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAA
*** * * *** ** *
736308 TTTTGGCCCCAAACTTGGT-AGACGTGAGCCTTTTATTTTTGTTGGCATGCACAA----AAAAAT
631 AAGTGTCCCC--A-TT--TCAGAC---A--CTTTAATGGCTACTGGCA-GCA-AACCTGTAAAAT
*** * ** * ** ** *
736368 -TCAGCTAA-AAACTTCAA----GTGT-A---CAAGA-TTTTG-TGA-CCAT---TTG--AA-AA
684 CTCA---AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATAT
* * ** ** * * * * *****
736414 AAGTGTCCCCA-TTTCAGACACTTTAATGGC-TA-C-TG-GCAGCA-A--ACCTGTAAAATCTCA
746 AAG-G-GCCAAGTACCAG-CAC--CCATCGCACATCATGTGC-GCACACCCCCCG-GCCCCCTC-
* * *** ***** * * * ** * ** **
736471 AATGCTTTTTAA-GGGGGTG-TG-AGTTCTCAAGGTT-TGATGGGGGATAGGGGGCCA-ATATAA
803 GAT-CATCGGAACCCCAATGCCGCCG--GTC-AGGTTCT--CCGGCGAT---GCTCCAGCGAT--
** *** **
736531 GG-GCCAAG-T-ACCAGCACCCAT-C-GCACATCATGTGTGCACACCCCCCC
857 GGTGCCCCGATGA--AG-AAAAATGCGGCAC--CA-----GCACA--TGCCC
** * * ** * * * *
736578 G-GCCCCCCA-AT-C-GTCGGAACCC-CAATGCC-GCT-GGTC--AGGTTCTCAGGCGATG--CT
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGT-CCGGTTCGATCTTA-G-ACT-AGG-AATGAACT
* *** * * * * *
736632 CCGACGATGGTGCCCCGAC-GAAGAAAAATGCAGCACCAGCACATGCCCAAGCTCAGCATGTGCT
61 -C--C-AT-ATGCTTAGACTG--G--GAATG-AACTCC-G--TATGCCTAAG-TCA--A----C-
* * *** * * * ** *** * * * *
736696 GC-CGCAACCCTCGAT-CTGGTCCGATCTTAGACTGGGAACGA-ACTCTGTAT-C-CTTAGACTG
105 CCACGAAACGAGCG-TGC-GG-GCG--CTCA-ACCGGCCA-GAGGGGCGGGATGCGC-AAG-CCG
* * * * * ** * * ** ** * * * * *
736756 GGAAT-GAAC---T--CCGTATGCCT-AAGTC-AACCCAC-AAAACAAGCGTGCGG-GCGCTCAG
161 GGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCACAACCCT-CGGTTCGGTCCG
* ** * * * * *** * * ** *
736811 -TCGGCTAGA--GGGACGGCA-TGCGCAAGCCGGGGGCCACCCGGGTCCCCCTCTACGTGCTGCC
225 ATC--TTAGACTGGGAATGAACTCCGTATGCC-TAAGCCAACC--G----AC-GAACGAGC-G--
* * * * ** * * * * * * **
736872 AATCCTGCTGTCGTAACCCT-CGATCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGACTA
277 ---GCGGCGGGCG-GGCACTACG-T-CGACCAGA---GAGAC-GGG-ATG-----CGCAAG-CCG
* * * ** * *** ** * *** ***
736936 TGCCAACCGATGAAAGGAATGGGCGGGCGGGCAGGCAGGCACAATGCCGGCCAGAGAGACGGGAT
325 TG--GATCGAT---AGG-GT-GGTAGGTGGG--TTTAGGCAC-AT--C-TTCATA-TTTCTATAT
* ** * * * *
737001 GCGCAAGTCGTGGATCGATAGCGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTAT-GTGCC
376 GC-CAA----T-G--CCAT----TTTTA--T-GGCTT--GTA-A-ATTCATA---CAATGGTCCC
**** * * * * *** ***
737065 --AATGCCATTTTTTTG--GCTTGTAAAT-TC-ATA-AA-TGGTCCCCTAAGCCTTCACGTGAAG
419 TTAA-GCC-TTCACGTGAAG-TT-T-CATGGCAAGACAACTCGTTTTCT-ATTTTTCA--TG-A-
* *
737122 TTCAATGGCAAGGCGAATCGTTTTCTATTTTTCACGATTTTCAAAAATTTTTGTGGTTCAGGATT
474 TT---T-TCAA----AA-C-TTTT-------T----A----C------------GGTTCGGGATT
* ** *
737187 TTTTAAAA-TTTTTTCGAAAGGAGTTTTGGCCCCAAGCTTCATAGACATGATCCTTGTATTTTT-
502 TTTTAAAATTTTTTTCG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTG
* *
737250 TATGGCATGCACAAAAACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAA
566 T-TGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
737315 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
630 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
*
737380 TTTAA-GGGGTGTGAGTTC-CTGAGGTTTGATGACGGATAGGTGGG-CAATATAAGGGCCAAGTA
695 TTTAAGGGGGTGTGAGTTCTC-GAGGTTTGATGAGGGATAGG-GGGCCAATATAAGGGCCAAGTA
* **
737442 CCAACACCCATCGCACATCATGTGCGCACA-CCCCCGGCCCCC-CGATCGCCGGAACCCCAATGC
758 CCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCTCGATCATCGGAACCCCAATGC
** * * * *
737505 CGCCAATCAGGTTCTCCGACAATGCTTC-GACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCA
823 CGCCGGTCAGGTTCTCCGGCGATGCTCCAG-CGATGGTGCCCCGATGAAGAAAAATGCGGCACCA
* *
737569 ACACATGCCT
887 GCACATGCCC
* * * * * * * * *
737579 GAGCCCAGCATGTGCTGTCGTAACCCTCGATCCGATCCGATATTAGATTGGGAAAGAACTCCGTA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
* *
737644 TGCTTAGACTGGGAATGAGCTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCA
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * ** * * * *
737709 GCCGGCCAGAGGGGCGGGATGCGTAAGCTGAGGATCGGCCAGGTCCCCCTCTACTTGCTACCGAT
131 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * *
737774 CTTGCTACCGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
196 CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * ** * * *
737839 AACCGATGAAACGAACGGGCAGGTAGGCGGGCTCTACGCCGGCCAGAGAGACGGGATGCGCAAGC
261 AACCGACG-AACGAGC-GGC-GGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGC
* * **
737904 CGTGTATCGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
323 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATATGCCAATGCCATT
**
737969 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGA
388 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAA
* * *
738034 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGGGATTTTTTAAAA-TTTCTTC
453 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTC
* * * *
738098 GGAAGGAGTTTTGGCCCCAAACTTGGTAAACGTAATCCTTGTATTTTTTTTGG-ATGCAAAAAAA
518 -GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * *
738162 AATTCAGCTAGAAACTCGAAGTGTACAATATTTTGTAACCATTTGAAACAAGTGTCCCCATTTCA
582 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
*
738227 CACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
647 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
738292 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-CCTCATCGCACAT
712 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC-CATCGCACAT
* * ** **
738356 CTTGTGCGCATACCGCCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGCTAGTCAGGTTCTC
776 CATGTGCGCACA-C-CCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTC
* * * *
738420 TGACGATGCTCCGGCGATGGTGCCCCAATGAAGAAAAATGCGGCACCAGCACATGCCC
839 CGGCGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
* * * * * * *
738478 AAGCCCAGCATGTGCTGTCGCAACCCTCTGTTCGGTCCGATCTTAGACTGGGAATGAACTTCGTA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
* * *
738543 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAGGAAACAAGCG-GTTGGGCGCTC
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGCGCTC
** * *
738607 AGTCGGCC-GAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCTGCATGCTGCCGA
130 AACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA
* ** * * * *
738671 TCATGCTACCGTAACCCTTGGTTCGGTCTGATCATAGACTAGGAATGAACTCCGTATGCCTAAGC
195 TCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * **
738736 CAACCTACGAAAAGAGCGGGCGGGCGGGCAGACGGGCGGGCGGCACTACGCCGGTCAGAGAGACG
260 CAACCGACG---A-A-CGAGC-GGC--G--G-CGGGC--G-GGCACTACGTCGACCAGAGAGACG
* * * **
738801 GGATGTGCAAGCCGTGGATCGATAGCGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCAT
311 GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATAT
*
738866 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACTTGAAGTTTC
376 GCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC
* * * ** *
738931 ATGGCAAGACGACTCGTTTTCTATTTTCCATTATTTTTGAAACTTTTTACGGTTCAGGATTTTTT
441 ATGGCAAGACAACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTT
* * * *
738996 AAAA-TTTTTTCGGTCA-GAGTTTTGGCCCTAAACTTGGTAGATGTGAGCCTTGTATTTTTGTTG
506 AAAATTTTTTTC-G-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTG
*
739059 GCATGCACAAAAAAATTCAGCTAAAAACTTC-AAGTGCACAAGATTTTGTGACCATTTGAAAAAA
569 GCATGCACAAAAAAATTCAGCTAAAAAC-TCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
739123 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
633 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * * *
739188 AAGGGGGTGTGAGTTCTCAAGGTTTCATGGGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGC
698 AAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * *
739253 ACCCATCGCACATCATGTGTGCACACCCCCCCGGCCCCTTCGATCACCGGAAGCCCAATGCCGCC
763 ACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGCC
* * * ** *
739318 GATCAGGTTCTTCGGTGATGCTCTGGCGATGGTGCCCC-AGCGAAGAAAAATGCGGCACCAGCAC
827 GGTCAGGTTCTCCGGCGATGCTCCAGCGATGGTGCCCCGA-TGAAGAAAAATGCGGCACCAGCAC
739382 ATGCCC
891 ATGCCC
* * * *
739388 AAGCCCAGCATGTGCT-ACTGCAACCCTCGGTCTGG-TCTGATCTTAGACTAGGAATGAACTCCG
1 GAGCCCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTTC-GATCTTAGACTAGGAATGAACTCCA
* * * *
739451 TATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCGACCCCAC-AGAATGAGCGTGCGAGCG
64 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC-AACCCACGA-AACGAGCGTGCGGGCG
* * * *
739515 CTTAACCGACCAGAGGGGCGGGATGCGCAAGCCGGGGAACGATCGGGTCCACCTCTGCGTGCTGC
127 CTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC
* * * *
739580 CGATCCTACTACCACAACCCTTGGTTCGGTCCTAACTTAGACTGGGAATGAACTCCGTATGCCTA
192 CGATCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * *
739645 AGGCAACCGATGAA--A--TGC-GCGGGCGGGCATTACGTCGACCAGAGAGACGGGATGCGCAAG
257 AGCCAACCGACGAACGAGCGGCGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAG
* * * * **
739705 CCGTGGATCGATAAGGTGGTAAGTGGGTCTAGGCACATCTTTATATTTCTACGTGCCAATGCCAT
322 CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATATGCCAATGCCAT
* *
739770 TTTTATGGCCTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATC
387 TTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA-C
* *
739835 -ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTT
451 AACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTT
* * *
739899 TGGAAGGGGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
516 TCGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
* * *
739964 AAATTGAGCTAAAAACTCAAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTC
581 AAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
** * * *
740029 AGACACCATAATAGCTACAGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
646 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
* *
740094 TTCTCGAGGTTTTATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACAT
711 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACAT
* * * *
740159 CATGTGCGCACACTCCCCCCGGCCCCCAT-GATCGTCAGAACCCCAATGTCGTCGGTCAGGTTCT
776 CATGTGCGCACA--CCCCCCGGCCCCC-TCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCT
*
740223 CCGGTGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
838 CCGGCGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
* * * *
740282 GAGCCCAGTATGTGCTGCCACAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
*
740347 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCGCTCA
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * *
740412 GCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTACCGAT
131 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * ** *
740477 CCTGCTGCCCCAACCCTTGGTTTGGTCTAATCTTAGACTGGGAATAAACTC
196 CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTC
740528 ATACAATGGT
Statistics
Matches: 5933, Mismatches: 1168, Indels: 1012
0.73 0.14 0.12
Matches are distributed among these distances:
891 174 0.03
892 189 0.03
893 877 0.15
894 324 0.05
895 309 0.05
896 171 0.03
897 31 0.01
898 128 0.02
899 220 0.04
900 6 0.00
901 217 0.04
902 658 0.11
903 199 0.03
904 265 0.04
905 130 0.02
906 73 0.01
907 27 0.00
908 12 0.00
909 273 0.05
910 373 0.06
911 29 0.00
912 115 0.02
913 1 0.00
915 4 0.00
916 2 0.00
917 3 0.00
920 4 0.00
923 6 0.00
924 1 0.00
925 4 0.00
927 2 0.00
928 3 0.00
929 16 0.00
930 2 0.00
932 2 0.00
933 8 0.00
934 15 0.00
935 13 0.00
936 8 0.00
937 18 0.00
938 6 0.00
939 2 0.00
940 3 0.00
941 11 0.00
942 1 0.00
943 3 0.00
944 6 0.00
947 4 0.00
948 7 0.00
949 4 0.00
950 12 0.00
951 19 0.00
952 19 0.00
953 19 0.00
954 13 0.00
955 19 0.00
956 20 0.00
957 12 0.00
958 9 0.00
959 22 0.00
960 13 0.00
961 26 0.00
962 14 0.00
963 13 0.00
964 10 0.00
965 32 0.01
966 17 0.00
967 10 0.00
968 11 0.00
969 12 0.00
970 28 0.00
971 19 0.00
972 14 0.00
973 12 0.00
974 2 0.00
975 7 0.00
976 11 0.00
977 17 0.00
978 11 0.00
979 11 0.00
980 11 0.00
981 23 0.00
982 15 0.00
983 25 0.00
984 13 0.00
985 4 0.00
986 3 0.00
987 11 0.00
988 13 0.00
989 18 0.00
990 10 0.00
991 10 0.00
992 21 0.00
993 18 0.00
994 10 0.00
995 13 0.00
996 8 0.00
997 10 0.00
998 8 0.00
999 20 0.00
1000 5 0.00
1001 10 0.00
1002 21 0.00
1003 25 0.00
1004 26 0.00
1005 22 0.00
1006 8 0.00
1007 12 0.00
1008 20 0.00
1009 19 0.00
1010 12 0.00
1011 1 0.00
1012 9 0.00
1013 11 0.00
1014 19 0.00
1015 14 0.00
1016 8 0.00
1017 9 0.00
1020 3 0.00
1021 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (896 bp):
GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTAGGAATGAACTCCATA
TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
AACCGACGAACGAGCGGCGGCGGGCGGGCACTACGTCGACCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATATGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACAACTC
GTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTTCGAA
GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCGGCCCCCTCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT
GCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
Found at i:735438 original size:902 final size:898
Alignment explanation
Indices: 732023--735943 Score: 4940
Period size: 902 Copynumber: 4.4 Consensus size: 898
732013 ATTTGCCCCT
**
732023 GAGCCCAGCCATGTGCTGTC-CAACCCTC--TCCGGTTCGATCTTAGACTAAGAATGAAACTCCA
1 GAGCCCAG-CATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATG-AACTCCA
* * * *
732085 TATGTTTAGTCTGGGAATGAACTCCGTA-ACCTAAGTC-ACCCACG-AACGAGCGTACGGGCGGC
64 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGC-GC
* * * *
732147 TCAACCAAGCCAGAAGGGC-AGAT-CGCAAGCCAGGGATCTG-TC-GGTCCCCCTCCTAGTCGTG
128 TCAACC-GGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC-GATCGGGTCCCCCT-CT-G-CGTG
* * * * * *
732208 CTGTCGATCCTACTGCCACAAACCTCGGTCCGGTCCGATCTTTGACTGGG-ATGAACTCCGTATG
188 CTGCCGATCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * ** *
732272 CCTAAG-CAACCTGAC-GAACGAGCGGGCGGCGGGGCGGGCA-TTTGTCGGCCAAAGAGGACGGG
253 CCTAAGCCAACC-GACAAAACGAGCGGGGGGC-GGGCGGGCACTACGTCGGCCAGAGA-GACGGG
*
732334 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTTAGGCACATC-TCATATTTCAGCATG
315 ATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGG-TTTAGGCACATCTTCATATTTCTGCATG
* *
732398 CC-ATG-CATTTTTATGGCTTGTAAATTC-CACAATGGTCCCTT-AGCCTCCACGGTGAAGTTTC
379 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCAC-GTGAAGTTTC
* * * *
732459 ATGGCAAGCACAACTCGTTTTCTATTTTTCATGATTTTTAAAACTTTTTGC-GTTGGGGA-TTTT
443 ATGGCAAG-ACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTT
* * *
732522 TAAAATTTTTTTGGAAGCAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGG
507 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGG
*
732587 CATGCACAAAAAAATTCAGCTAAAAACTCGAACTGTACAAGATTTTGTGACCATTTGAAAAAAGT
572 CATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGT
*
732652 GTCCTCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
637 GTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA
* *
732717 GGGGGTGTGAGTTCTCGAGGTTTGATGTGGGATAGGGGGCCAATATAAGGGCCAAATACCAGCAC
702 GGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCAC
* * * *
732782 CCATCACACATCATGTGCGCACACCACCCCGGCCCCCTCGATCGTCGGAACCCCAATGCCACTGG
767 CCATCGCACATCATGTGCGCACACCCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGG
* * *
732847 TCAGGTTCTCCGGTGATGCTCCGACGATGCTCTGGCGATGGTGCCCTGGTGAAGAGAAATGCGGC
831 TCAGGTTCTCCGGTGATGCT-C--C-A-------GCGATGGTGCCCCGATGAAGAAAAATGCGGC
* *
732912 ACCAACACATGCTC
885 ACCAGCACATGCCC
* * * * *
732926 GAGCCCAGCATGTGCTGTCGCAACCCTCGATCCGATCCGATCTTAGACTAGGAATGAACTCCGTA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATA
* *
732991 TGCTTAGACTGGGAATGAACTCTC-TATGCCTAAGTCAACCCATGAAACGAGCGTGTGGGCGCTC
66 TGCTTAGACTGGGAATGAACTC-CGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * ** * ** * **
733055 AGCCGACCATAGGGGCGGGATGCATAAGTCGGGGATCGGCCGGGTCCCCCTCTGTGTGCTTTCGA
130 AACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGA
* * * * * *
733120 TCCTGCT--------GCT-GGTTCGGTCCAATCTTAGACTAGGAATGAACTCCGTGTACCTATGC
195 TCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * * * *
733176 CGACCGACGAAACGAGCGAGCGGGCGGGCGGGTGGGCACTATGCCAGCCAGAGAGACAGGATGCG
260 CAACCGAC-AAA--A-CGAGCGGG-GGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCG
* *
733241 CAAGCCGTGGATCGATAGGGTGGTAGGTAGGTTTAGTCACATCTTCATATTTCT-CTATGCCAAT
320 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGC-ATGCCAAT
* *
733305 GCCATTTTTATGGCTTGTAAATTTATACAATGGCCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
384 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * **
733370 AGACAACTCGTTTTCTATTTTTCACGATTTTTGAAAC-TTTTACGGTTCGGGATTTTTT-AAATT
449 AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * * * * *
733433 TTTTTGGAAGGATTTTTGGCCCCCAGAGTTGGTAGAC-TGGATCCTTGTATTTTTGTTTGCCTGC
514 TTTTCGGAAGGAGTTTTGG-CCCCAAACTTGGTAGACGT-GATCCTTGTATTTTTGTTGGCATGC
* * *
733497 AC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAATATTTTCTGACCATTTTAAAAAAGTGTCCC
577 ACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCC
* * *
733561 CATTTCAAACATTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGAGG
642 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGG
* * *
733626 TGTGAGTTCTCAAGGTTTGATGGGGGATA-GGGGCCAATATAAGGGCCAAGTACTAGCACCCATC
707 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
* ** * *
733690 GCACATCATGTGCGCACACCCCCCCGGCCCCTTCGATCACCGGAAGCCCAATGCCGCCGATCAGG
772 GCACATCATGTGCGCACACCCCCCCGGCCCC-CCGATCGTCGGAACCCCAATGCCGCCGGTCAGG
* * * * *
733755 TTCTCCGGCGATGCTCC-GATGATGGTGCCCC-AGCGAAGAAAAATGTGGCACTAGCACATGCCC
836 TTCTCCGGTGATGCTCCAG-CGATGGTGCCCCGA-TGAAGAAAAATGCGGCACCAGCACATGCCC
* * * * *
733818 AAGCCCAGCATGTGCT-ACTGCAACCCTCGGTCTGG-TCTGATCTTAGACTAGGAATGAACTCCG
1 GAGCCCAGCATGTGCTGTC-GCAACCCTCGGTCCGGTTC-GATCTTAGACTGGGAATGAACTCCA
* * * *
733881 TATGCTTAGACTGGGATTGAACTCCGTATGCCTAAGTCAACCCCACGGAACGAGCGTGCGAAGCC
64 TATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAA-CCCACGAAACGAGCGTGCG-GGCG
* * * * *
733946 CTTAACCGACCAGAGGGGCAGGATGCGCAAGCCGGGGAACGATCGGGTCCACCTCTGCGTGCTGC
127 CTCAACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGC
* * *
734011 CGATCCTGCTACCACAACCCTCGGTTCGGCCCTAACTTAGACTGGGAATGAACTCCGTATGCCTA
192 CGATCCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTA
* ** * * * *
734076 AGGCAACCGAC--GTC-A-C---GCGCGGGCGAGCATTACGTCGACCAGAGAGACGGGATGCGCA
257 AGCCAACCGACAAAACGAGCGGGGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCA
* * ***
734134 AGCCGTGGATCGATAGGGTGGTAAGTGGGTCTAGGCACATCTTCATATTTCTATGTGCCAATGCC
322 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
* * * *
734199 ATTTTTACGGCCTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCGTGGCAAGA
387 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * **
734264 TCG-CTCATTTTCTATTTTTCATAATTTTCAAAACTTTTTACGGTTCAAGATTTTTTAAAATTTT
452 -CGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAA-TTT
*
734328 TTTC-GAAGGAGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
515 TTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACA
* *
734392 AAAAAATTGAGCTAAAAACTCGAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCAT
580 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* * *
734457 TTCAGACACCTTAATGGCTACTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGT
645 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
* * *
734522 GAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCCTCGCA
710 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * *
734587 CATCATGTGCGCACACTCCCCCTGGCCCCCACGATCATCGGAACTCCAATGTCGCCGGTCAGGTT
775 CATCATGTGCGCACAC-CCCCCCGGCCCCC-CGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
* * *
734652 CTCCGGTGATGCTCCAGCGATGGTACCCCGATGAAGAAAAATGCGACACCAGCACATGCAC
838 CTCCGGTGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
** * * *
734713 GAGCCCAATATGTGCTGGCACAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGGACTCCATA
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATA
* *
734778 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACAAACGTGCGGGCGCTCA
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * *
734843 GCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTACCGAT
131 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
*
734908 CCTGCTACCACAACCCTCGGTTTGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
196 CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
734973 AACTGACAAAATGAGCGGGTGGGCGGGTGGGCACTACATCGGCCAGAGAGACGGAATGCGCAAGC
261 AACCGACAAAACGAGCGGG-GGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGC
*
735038 CGTGGATCGATAGGGTTGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
325 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
*
735103 TTTATGGCTTGTAAACTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
390 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
*
735168 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTTAAAATTTCTTC
455 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGA-TTTTTTAAAATTTTTTC
** * *
735233 GGAAGGAGTTTTCACCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCAAAAAAA
519 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* * * *
735298 AATTCAGCTAGAAACTCGAAGTGTACAATATTTTGTAACCATTTGAAAAAAGTGTCACCATTTCA
584 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
735363 GGCACTTTAATGGCTACTGGCAGTC-AACCTGTAAAATCTCAAATGCTATTTAAGGGGGTGTGAG
649 GACACTTTAATGGCTACTGGCAG-CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAG
735427 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-CCTCATCGCACA
713 TTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC-CATCGCACA
* * * *
735491 TCTTGTGTGCATACCGCCCCCGGGCCCCCCGATCGTCGGAACCCCAATGCCGCCAGTCAGGTTCT
777 TCATGTGCGCACACC-CCCCC-GGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCT
** * * * * *
735556 CCGACGATGCTTCGGCGATGGTGCCCTGGTGAAGAAAAATGTGGCACCAGCACATGCCC
840 CCGGTGATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
* * * *
735615 GAGCCTAGCATGTGCTGTCGCAACCCTCTGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATT
1 GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATA
* * * * *
735680 TGCTGAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAGGAAACGAGCGGGTGGGCACTCA
66 TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * *
735745 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTGCATGCTGCCGAT
131 ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * * *
735810 CATACTGCCACAACCCTCGGTCCGGTCTGATCATAGACTGGGAATGAACTACGTATGCCTAAGCC
196 CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
** * * * *
735875 AACCGATGAAACGAGCGGGTGGGTGGGTAGGCGGGCACTACGCCGGCCAGAGGGGCGGGATGCGC
261 AACCGACAAAACGAGC-GG-GGG-GCG--GGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGC
735940 AAGC
321 AAGC
735944 TGGGGATTGG
Statistics
Matches: 2610, Mismatches: 327, Indels: 159
0.84 0.11 0.05
Matches are distributed among these distances:
891 180 0.07
892 184 0.07
893 304 0.12
894 136 0.05
895 178 0.07
896 27 0.01
897 24 0.01
898 4 0.00
899 1 0.00
900 3 0.00
901 219 0.08
902 665 0.25
903 197 0.08
904 263 0.10
905 129 0.05
906 60 0.02
907 27 0.01
908 9 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (898 bp):
GAGCCCAGCATGTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATA
TGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
ACCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTCTGCGTGCTGCCGAT
CCTGCTACCACAACCCTCGGTTCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
AACCGACAAAACGAGCGGGGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCC
GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
TCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
TTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
GTGCGCACACCCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGTG
ATGCTCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCC
Found at i:736021 original size:171 final size:171
Alignment explanation
Indices: 735746--736064 Score: 449
Period size: 171 Copynumber: 1.9 Consensus size: 171
735736 GGGCACTCAA
735746 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTGCATGCTGCCGATC
1 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTGCATGCTGCCGATC
* * * *
735811 ATACTGCCACAACCCTCGGTCCGGTCTGATCATAGACTGGGAATGAACTACGTATGCCTAAGCCA
66 ATACTACCACAACCCTCAGTCCAGTCTGATCATAGACTGGGAATGAACTACGTATACCTAAGCCA
*
735876 ACCGATGAAACGAGCGGGTGGGTGGGTAGGCGGGCACTACG
131 ACCGACGAAACGAGCGGGTGGGTGGGTAGGCGGGCACTACG
* * * * * *
735917 CCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATTGGCCGGGTCCCCCTCTGCGTGCTGTCGATC
1 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTGCATGCTGCCGATC
* * * ** * * * * *
735982 CTGCTACCATAACCCTCAGTTTAGTTTGATCTTAGACTGGGAATGAACTCCGTATACCTTAGCCG
66 ATACTACCACAACCCTCAGTCCAGTCTGATCATAGACTGGGAATGAACTACGTATACCTAAGCCA
736047 ACCGACGAAACGAGCGGG
131 ACCGACGAAACGAGCGGG
736065 CGGGCGGGCA
Statistics
Matches: 127, Mismatches: 21, Indels: 0
0.86 0.14 0.00
Matches are distributed among these distances:
171 127 1.00
ACGTcount: A:0.21, C:0.29, G:0.32, T:0.18
Consensus pattern (171 bp):
CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCAGGTCCCCCTCTGCATGCTGCCGATC
ATACTACCACAACCCTCAGTCCAGTCTGATCATAGACTGGGAATGAACTACGTATACCTAAGCCA
ACCGACGAAACGAGCGGGTGGGTGGGTAGGCGGGCACTACG
Found at i:736750 original size:26 final size:26
Alignment explanation
Indices: 736721--736771 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
736711 CTGGTCCGAT
*
736721 CTTAGACTGGGAACGAACTCTGTATC
1 CTTAGACTGGGAACGAACTCCGTATC
*
736747 CTTAGACTGGGAATGAACTCCGTAT
1 CTTAGACTGGGAACGAACTCCGTAT
736772 GCCTAAGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.22, G:0.24, T:0.27
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGTATC
Found at i:737650 original size:26 final size:26
Alignment explanation
Indices: 737621--737672 Score: 77
Period size: 26 Copynumber: 2.0 Consensus size: 26
737611 CGATCCGATA
*
737621 TTAGATTGGGAAAGAACTCCGTATGC
1 TTAGACTGGGAAAGAACTCCGTATGC
* *
737647 TTAGACTGGGAATGAGCTCCGTATGC
1 TTAGACTGGGAAAGAACTCCGTATGC
737673 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 0
0.88 0.12 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.27, C:0.17, G:0.29, T:0.27
Consensus pattern (26 bp):
TTAGACTGGGAAAGAACTCCGTATGC
Found at i:738377 original size:899 final size:896
Alignment explanation
Indices: 735916--740527 Score: 6264
Period size: 893 Copynumber: 5.1 Consensus size: 896
735906 CGGGCACTAC
* * * *
735916 GCCGGCCAGAGGGGCGGGATGCGCAAGCTGGGGATTGGCCGGGTCCCCCTCTGCGTGCTGTCGAT
1 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
** * ** * * *
735981 CCTGCTACCATAACCCTCAGTTTAGTTTGATCTTAGACTGGGAATGAACTCCGTATACCTTAGCC
66 CCTGCTACCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * *
736046 GACCGACGAAACGAGCGGGC-G-GGCGGGCACTACG-CTGCCAGAGAGACGGGATGCGCAAGCCG
131 AACCGATGAAACGAACGGGCGGAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
* *
736108 TGGATCGATAGCGTGGTAGGTGGGTTTAGGTAGATCTTCATATTTCTACGTGCCAATGCCATTTT
196 TGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
* * * *
736173 TATGGCTTGTAAATACAAACAATGGTCCCTTAAGCCCTCACTTGAAGTTTCATGGCAAGACGACT
261 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
736238 TGTTTTCTATTTTTCATGATCTTT-GAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
326 CGTTTTCTATTTTTCATGAT-TTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGG
* * *
736302 TAGGAGTTTTGGCCCCAAACTTGGTAGACGTGAGCCTTTTATTTTTGTTGGCATGCACAAAAAAA
390 AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAA
736367 TTCAGCTAAAAACTTCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
455 TTCAGCTAAAAAC-TCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGA
*
736432 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTTTTTAAGGGGGTGTGAGTTC
519 CACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTC
* *
736497 TCAAGGTTTGATGGGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
584 TCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCAT
* * * * *
736562 GTGTGCACACCCCCCCGGCCCCCCAATCGTCGGAACCCCAATGCCGCTGGTCAGGTTCTCAGGCG
649 GTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
* * * *
736627 ATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCAGCACCAGCACATGCCCAAGCTCAGCATG
714 ATGCTTCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATG
* * * *
736692 TGCTGCCGCAACCCTCGATCTGGTCCGATCTTAGACTGGGAACGAACTCTGTATCCTTAGACTGG
779 TGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGG
* *
736757 GAATGAACTCCGTATGCCTAAGTCAACCCACAAAACAAGCGTGCGGGCGCTCA
844 GAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * *
736810 GTCGGCTAGAGGGACGGCATGCGCAAGCCGGGG-GCCACCCGGGTCCCCCTCTACGTGCTGCCAA
1 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCGTGCTGCCGA
** * * * * * *
736874 TCCTGCTGTCGTAACCCTCGATCCGATCTGATCTTAGACTGGGAATGAACTCCGTATGACTATGC
65 TCCTGCTACCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
736939 CAACCGATGAAAGGAATGGGCGGGCGGGCAGGCAGGCACAATGCCGGCCAGAGAGACGGGATGCG
130 CAACCGATGAAACGAA----CGGGC-GG-AGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * *
737004 CAAGTCGTGGATCGATAGCGTGGTAGGTGGGCTTAGGCACATCTTCATATTTCTATGTGCCAATG
189 CAAGCCGTGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATG
* *
737069 CCATTTTTTTGGCTTGTAAATTCATA-AATGGTCCCCTAAGCCTTCACGTGAAG-TTCAATGGCA
254 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTC-ATGGCA
* * * * ** *
737132 AGGCGAATCGTTTTCTATTTTTCACGATTTTCAAAAATTTTTGTGGTTCAGGATTTTTTAAAATT
318 AGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATT
* * ** *
737197 TTTTCGAAAGGAGTTTTGGCCCCAAGCTTCATAGACATGATCCTTGTATTTTT-TATGGCATGCA
383 TTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCA
*
737261 CAAAAACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
447 CAAAAAAATTCAGCTAAAAACTC-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
737326 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGT
511 ATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
* *
737390 GTGAGTTC-CTGAGGTTTGATGACGGATAGGTGGG-CAATATAAGGGCCAAGTACCAACACCCAT
576 GTGAGTTCTC-GAGGTTTGATGAGGGATAGG-GGGCCAATATAAGGGCCAAGTACCAGCACCCAT
**
737453 CGCACATCATGTGCGCACA--CCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCAATCAGG
639 CGCACATCATGTGCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGG
* * * * **
737516 TTCTCCGACAATGCTTCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAACACATGCCTGA
704 TTCTCCGGCGATGCTTCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAA
* * * * * *
737581 GCCCAGCATGTGCTGTCGTAACCCTCGATCCGATCCGATATTAGATTGGGAAAGAACTCCGTATG
769 GCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
737646 CTTAGACTGGGAATGAGCTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGTGCTCA
834 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * * * * * * *
737709 GCCGGCCAGAGGGGCGGGATGCGTAAGCTGAGGATCGGCCAGGTCCCCCTCTACTTGCTACCGAT
1 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * *
737774 CTTGCTACCGCAACCCTCAGTCCAGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
66 CCTGCTACCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
*
737839 AACCGATGAAACGAACGGGCAGGTAGGCGGGCTCTACGCCGGCCAGAGAGACGGGATGCGCAAGC
131 AACCGATGAAACGAACGGGC-GG-AGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGC
* * * * *
737904 CGTGTATCGATAGGGTGGTATGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
194 CGTGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
*
737969 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGA
259 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* * *
738034 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGGGATTTTTTAAAATTTCTTCG
324 CTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCG
* * * *
738099 GAAGGAGTTTTGGCCCCAAACTTGGTAAACGTAATCCTTGTATTTTTTTTGG-ATGCAAAAAAAA
389 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* * * * *
738163 ATTCAGCTAGAAACTCGAAGTGTACAATATTTTGTAACCATTTGAAACAAGTGTCCCCATTTCAC
454 ATTCAGCTAAAAACTC-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
738228 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
518 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
738293 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC-CCTCATCGCACATC
583 CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC-CATCGCACATC
* * ** *
738357 TTGTGCGCATACCGCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCTAGTCAGGTTCTCTG
647 ATGTGCGCACACC-CCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCG
* * * *
738422 ACGATGCTCCGGCGATGGTGCCCCAATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGC
711 GCGATGCTTCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGC
* * *
738487 ATGTGCTGTCGCAACCCTCTG-TTCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGA
776 ATGTGCTGCCGCAACCCTC-GATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGA
* * *
738551 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCAGGAAACAAGCG-GTTGGGCGCTCA
840 CTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTG-CGGGCGCTCA
* * * *
738608 GTCGGCC-GAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCTTCTGCATGCTGCCGAT
1 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * *
738672 CATGCTACCGTAACCCTTGGTTCGGTCTGATCATAGACTAGGAATGAACTCCGTATGCCTAAGCC
66 CCTGCTACCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * ** *
738737 AACCTACGAAAAGAGCGGGCGGGCGGGCAGACGGGCGGGCGGCACTACGCCGGTCAGAGAGACGG
131 AACCGATG--AA-A-CGAACGGGC--G--GA--GGC--G-GGCACTACGCCGGCCAGAGAGACGG
* * * *
738802 GATGTGCAAGCCGTGGATCGATAGCGTCGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATG
183 GATGCGCAAGCCGTGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTG
*
738867 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACTTGAAGTTTCA
248 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* * ** *
738932 TGGCAAGACGACTCGTTTTCTATTTTCCATTATTTTTGAAACTTTTTACGGTTCAGGATTTTTTA
313 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTA
* * * *
738997 AAATTTTTTCGGTCA-GAGTTTTGGCCCTAAACTTGGTAGATGTGAGCCTTGTATTTTTGTTGGC
378 AAATTTTTTCGG-AAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGC
*
739061 ATGCACAAAAAAATTCAGCTAAAAACTTCAAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTG
442 ATGCACAAAAAAATTCAGCTAAAAAC-TCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
739126 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
506 TCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAG
* * * *
739191 GGGGTGTGAGTTCTCAAGGTTTCATGGGGGATAGGGGGCCAATATAAGGGCCAAGTACTAGCACC
571 GGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* * * * *
739256 CATCGCACATCATGTGTGCACACCCCCCCGGCCCCTTCGATCACCGGAAGCCCAATGCCGCCGAT
636 CATCGCACATCATGTGCGCACACCCCCCCGGCCCC-CCGATCGCCGGAACCCCAATGCCGCCGGT
* * * *
739321 CAGGTTCTTCGGTGATGC-TCTGGCGATGGTGCCCC-AGCGAAGAAAAATGCGGCACCAGCACAT
700 CAGGTTCTCCGGCGATGCTTC-GACGATGGTGCCCCGA-TGAAGAAAAATGCGGCACCAGCACAT
* * * * * *
739384 GCCCAAGCCCAGCATGTGCTACTGCAACCCTCGGTCTGGTCTGATCTTAGACTAGGAATGAACTC
763 GCCCAAGCCCAGCATGTGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTC
* * * *
739449 CGTATGCTTAGACTAGGAATGAACTCCGTATGCCTAAGTCGACCCCAC-AGAATGAGCGTGCGAG
828 CGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC-AACCCACGA-AACGAGCGTGCGGG
*
739513 CGCTTA
891 CGCTCA
* * * * *
739519 ACCGACCAGAGGGGCGGGATGCGCAAGCCGGGGAACGATCGGGTCCACCTCTGCGTGCTGCCGAT
1 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * *
739584 CCTACTACCACAACCCTTGGTTCGGTCCT-AACTTAGACTGGGAATGAACTCCGTATGCCTAAGG
66 CCTGCTACCGCAACCCTCGGTTCGGT-CTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
739648 CAACCGATGAAATG--C--GC-G-GGCGGGCATTACGTCGACCAGAGAGACGGGATGCGCAAGCC
130 CAACCGATGAAACGAACGGGCGGAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCC
* * *
739707 GTGGATCGATAAG-GTGGTAAGTGGGTCTAGGCACATCTTTATATTTCTACGTGCCAATGCCATT
195 GTGGATCGAT-AGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATT
* *
739771 TTTATGGCCTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATC-
259 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA-CG
* * *
739835 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTT
323 ACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTC
* *
739900 GGAAGGGGTTTTGGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
388 GGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAA
* *
739965 AATTGAGCTAAAAACTCAAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCA
453 AATTCAGCTAAAAACTC-AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
** * * *
740030 GACACCATAATAGCTACAGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
517 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
740095 TCTCGAGGTTTTATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATC
582 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * * *
740160 ATGTGCGCACACTCCCCCCGGCCCCCATGATCGTCAGAACCCCAATGTCGTCGGTCAGGTTCTCC
647 ATGTGCGCACAC-CCCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCC
* * *
740225 GGTGATGC-TCCAGCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCA
710 GGCGATGCTTCGA-CGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCA
* * * * *
740289 GTATGTGCTGCCACAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATATGCTTAG
774 GCATGTGCTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAG
*
740354 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCGCTCA
839 ACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
* * *
740412 GCCGGCCAGAGGGGTGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTACCGAT
1 GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
* * * * * *
740477 CCTGCTGCCCCAACCCTTGGTTTGGTCTAATCTTAGACTGGGAATAAACTC
66 CCTGCTACCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTC
740528 ATACAATGGT
Statistics
Matches: 3271, Mismatches: 383, Indels: 129
0.86 0.10 0.03
Matches are distributed among these distances:
892 5 0.00
893 571 0.17
894 301 0.09
895 248 0.08
896 214 0.07
897 5 0.00
898 116 0.04
899 543 0.17
900 6 0.00
901 86 0.03
902 275 0.08
903 104 0.03
904 3 0.00
905 1 0.00
906 4 0.00
908 2 0.00
909 272 0.08
910 373 0.11
911 26 0.01
912 114 0.03
913 2 0.00
ACGTcount: A:0.25, C:0.25, G:0.25, T:0.25
Consensus pattern (896 bp):
GCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCCGAT
CCTGCTACCGCAACCCTCGGTTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
AACCGATGAAACGAACGGGCGGAGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGCGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTACGTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
CGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAAATTTTTTCGGA
AGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
TCAGCTAAAAACTCAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACA
CTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTC
GAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGT
GCGCACACCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCGAT
GCTTCGACGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCAAGCCCAGCATGTG
CTGCCGCAACCCTCGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGA
ATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCA
Found at i:738548 original size:26 final size:26
Alignment explanation
Indices: 738519--738571 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
738509 TCGGTCCGAT
*
738519 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
738545 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
738571 C
1 C
738572 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:739465 original size:26 final size:26
Alignment explanation
Indices: 739429--739481 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
739419 CTGGTCTGAT
739429 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
739455 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
739481 C
1 C
739482 CTAAGTCGAC
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:740359 original size:26 final size:26
Alignment explanation
Indices: 740323--740375 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
740313 CCGGTTCGAT
740323 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
740349 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
740375 C
1 C
740376 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:741095 original size:26 final size:26
Alignment explanation
Indices: 741059--741111 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
741049 CCGGTTCAAT
*
741059 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
741085 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
741111 C
1 C
741112 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:741200 original size:736 final size:738
Alignment explanation
Indices: 739782--741229 Score: 2197
Period size: 736 Copynumber: 2.0 Consensus size: 738
739772 TTATGGCCTG
* *
739782 TAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGATCACTCGTTTTCTA
1 TAAACTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATCACTCGTTTTCTA
* ** * * ***
739847 TTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTTTGGAAGGGGTTTT
66 TTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTAAAAATTTCTTTGAAAAAAGTTTT
* * * *
739912 GGCCCCAAATTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTGAGCTAAA
131 GGCCCCAAATCTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAA
* * *
739977 AACTCAAAGTGTACAAGATTTTTTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACCATAATA
196 AACTCAAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCACCATTTCAGACACCATAATA
* * *
740042 GCTACAGGTAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTT
261 GCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTG
740107 ATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
326 ATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
* * * *** *
740172 TCCCCCCGGCCCCCATGATCGTCAGAACCCCAATGTCGTCGGTCAGGTTCTCCGGTGATGCTCCA
391 -CCCCCCAGCCCCCACGATCATCAGAACCCCAACACCGTCGGTCAGGTTCTCCGGCGATGCTCCA
* *
740237 GCGATGGTGCCCCGATGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGTATGTGCTGCCA
455 GCGATGGTGCCCCGATGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCA
* *
740302 CAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAAC
520 CAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAAC
* *
740367 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGCCGCTCAGCCGGCCAGAGGGGTGGGAT
585 TCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGACGCTCAGCCGGCCAGAGGGGTGAGAT
* * * *
740432 GCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGTGTGCTACCGATCCTGCTGCCCCAACCCTTGG
650 GCGCAAACCGGGGATCGACCGGATCCCCCTCTGCGTGCTACCGATCCTGCTACCCCAACCCTTGG
740497 TTTGGTCTAATCTTAGACTGGGAA
715 TTTGGTCTAATCTTAGACTGGGAA
740521 TAAACTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA-CGACTCGTTTTCT
1 TAAACTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATC-ACTCGTTTTCT
** *
740585 ATTTTTCACGATTTTTGAAACTTTTTGCGGTTC-AGGATTTTTAAAAATTTCTTTGAAAAAAGTT
65 ATTTTTCACGATTTTCAAAACTTTTTACGGTTCGA-GATTTTTAAAAATTTCTTTGAAAAAAGTT
*
740649 TTGGCCCCAAA-CTGGTAGACGTAATCCTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAGCTA
129 TTGGCCCCAAATCTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTA
* * * **
740713 GAAACTCGAAGTGTACAATATTTTGTAACCATTTGAAAAAAGTGTCACCATTTCAGACACTTTAA
194 AAAACTCAAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCACCATTTCAGACACCATAA
* *
740778 TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
259 TAGCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTT
* * *
740843 TGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTGCTAGCACCCATCGCACATCATGTGCGCAC
324 TGATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCAC
* * * *
740908 A-CCCCCTAGCCCCCCCGATCATC-GAAACCCTAACACCGTCGGTCAGGTTCTTCGGCGATGCTC
389 ACCCCCCCAGCCCCCACGATCATCAG-AACCCCAACACCGTCGGTCAGGTTCTCCGGCGATGCTC
* *
740971 CAGCGATGGTGCCCCGATGAAGAAAAATGCGACGCCAGCACTTGCCCGAGCCCAGCATGTGCTGC
453 CAGCGATGGTGCCCCGATGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGC
** * **
741036 CGTAACCCTTGATCCGGTTCAATCTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGA
518 CACAACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGA
* *
741101 ACTCCGTATGCCTAAGTCAACCCACGGAACGAGCGTGCGGACGCTCAGCCGGGCAGAGGGGTGAG
583 ACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGACGCTCAGCCGGCCAGAGGGGTGAG
* * * *
741166 ATGCGCAAACCGGGGATC-AGCTGGATCCCCCTCTGCGTGCTGCTGATCCTGCTACCGCAACCCT
648 ATGCGCAAACCGGGGATCGA-CCGGATCCCCCTCTGCGTGCTACCGATCCTGCTACCCCAACCCT
741230 CAGCCCGATC
Statistics
Matches: 637, Mismatches: 68, Indels: 11
0.89 0.09 0.02
Matches are distributed among these distances:
735 2 0.00
736 283 0.44
738 230 0.36
739 122 0.19
ACGTcount: A:0.26, C:0.25, G:0.23, T:0.26
Consensus pattern (738 bp):
TAAACTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATCACTCGTTTTCTA
TTTTTCACGATTTTCAAAACTTTTTACGGTTCGAGATTTTTAAAAATTTCTTTGAAAAAAGTTTT
GGCCCCAAATCTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAA
AACTCAAAGTGTACAAGATTTTGTAACCATTTGAAAAAAGTGTCACCATTTCAGACACCATAATA
GCTACAGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTG
ATGAGGGATAGGGGGCCAATAGAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
CCCCCCAGCCCCCACGATCATCAGAACCCCAACACCGTCGGTCAGGTTCTCCGGCGATGCTCCAG
CGATGGTGCCCCGATGAAGAAAAATGCGACACCAGCACATGCCCGAGCCCAGCATGTGCTGCCAC
AACCCTCGATCCGGTTCAATCTTAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAACT
CCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGACGCTCAGCCGGCCAGAGGGGTGAGATG
CGCAAACCGGGGATCGACCGGATCCCCCTCTGCGTGCTACCGATCCTGCTACCCCAACCCTTGGT
TTGGTCTAATCTTAGACTGGGAA
Found at i:741851 original size:26 final size:26
Alignment explanation
Indices: 741822--741874 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
741812 CCGGTTCGCT
741822 CTTAGACTGGGAATGAACTCCGCATG
1 CTTAGACTGGGAATGAACTCCGCATG
* *
741848 CTTAGATTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGCATG
741874 C
1 C
741875 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.26, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGCATG
Found at i:743287 original size:26 final size:26
Alignment explanation
Indices: 743258--743308 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
743248 AGTTCGATCA
*
743258 TAGACTGGGAATGAATTCCATATGCT
1 TAGACTGGGAATGAACTCCATATGCT
*
743284 TAGACTGGGAATGAACTCCGTATGC
1 TAGACTGGGAATGAACTCCATATGC
743309 CTAAGTTAAC
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.18, G:0.25, T:0.27
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCATATGCT
Found at i:744982 original size:427 final size:431
Alignment explanation
Indices: 744159--744995 Score: 1128
Period size: 427 Copynumber: 1.9 Consensus size: 431
744149 CTGGTTCGAT
* * * *
744159 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGTGCGGGCCCTCAGC
1 CTTAGACTGGGAATCAACTCCATATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCCCTCAGC
* * * ** *
744224 CAGCTAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCTCTCTGTGTGCTGTCGATCC
66 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGCCGATCC
** * **
744289 TGCTATCGTAACCCTCGGTCTGGTCCAATCTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAA
131 TGCTATCACAACCCTCAGTCTAATCCAATCTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAA
* * *
744354 CTGACGAAATGAGATGGCGGGCGGACGGGCGGGCACTACGCAGGCCAGAGAGACGGGACGCGCAA
196 CCGACG--A-GAGA--GCGAGCGGACGGGCGGGCACTACGCAGGCCAGAGAGACGGGACGCACAA
* * *
744419 GTCATGGATTGATAGGGCGGTAGGCAGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCA
256 GCCATGGATCGATAGGGCGGTAGGCAGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCA
* * *
744484 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGCAGTTTCACGACAAGAC
321 TTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTACACGACAAGAC
744549 GACTCGTATTCTATTTTTCAAGATCTTAGACTGGGAACTCCGTATG
386 GACTCGTATTCTATTTTTCAAGATCTTAGACTGGGAACTCCGTATG
* * **
744595 CTTAGGCTGGGAATCAACTCTATATGCCTAAGTCAACCCACGAAACGAACGTGCGGGTGCTCAGC
1 CTTAGACTGGGAATCAACTCCATATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCCCTCAGC
*
744660 CGGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-AGCCGGGTCCCCCTCTGCATGCTGCCGATC
66 CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGA-CCGGGTCCCCCTCTGCATGCTGCCGATC
* ** * * *
744724 CTGCTGTCACAACTTTCAGTCTAATCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAA-CCA
130 CTGCTATCACAACCCTCAGTCTAATCCAATCTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCA
* * *
744788 ACCGACG-GA-A-CGAGCGGGCGGGTGGGCACTACG-ACGGCCAGAGAGACGGGATGCACAAGCC
195 ACCGACGAGAGAGCGAGCGGACGGGCGGGCACTACGCA-GGCCAGAGAGACGGGACGCACAAGCC
* * ** * **
744849 GTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTTTGTGTGCCAATGCCATTT
259 ATGGATCGATAGGGCGGTAGGCAGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTT
* * *
744914 TTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTACATGGCAAGATGAC
324 TTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTACACGACAAGACGAC
*
744979 TCGTTTTCTATTTTTCA
389 TCGTATTCTATTTTTCA
744996 TGATTTTTGA
Statistics
Matches: 350, Mismatches: 49, Indels: 13
0.85 0.12 0.03
Matches are distributed among these distances:
426 1 0.00
427 174 0.50
430 1 0.00
431 2 0.01
435 10 0.03
436 162 0.46
ACGTcount: A:0.24, C:0.25, G:0.28, T:0.24
Consensus pattern (431 bp):
CTTAGACTGGGAATCAACTCCATATGCCTAAGTCAACCCACGAAACGAACGTGCGGGCCCTCAGC
CAGCCAGAGGGGCGGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTCTGCATGCTGCCGATCC
TGCTATCACAACCCTCAGTCTAATCCAATCTTAGACTAGGAATGAACTCCGTAAGCCTAAGCCAA
CCGACGAGAGAGCGAGCGGACGGGCGGGCACTACGCAGGCCAGAGAGACGGGACGCACAAGCCAT
GGATCGATAGGGCGGTAGGCAGGTTTAGGAACATCTTCATATTTCTGCATGCCAATGCCATTTTT
ATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTACACGACAAGACGACTC
GTATTCTATTTTTCAAGATCTTAGACTGGGAACTCCGTATG
Found at i:746937 original size:901 final size:896
Alignment explanation
Indices: 744583--748377 Score: 4832
Period size: 901 Copynumber: 4.3 Consensus size: 896
744573 CTTAGACTGG
* * * * *
744583 GAACTCCGTATGCTTAGGCTGGGAATCAACTCTATATGCCTAAGTCAACCCACGAAACGAACGTG
1 GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * *
744648 CGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATC-AGCCGGGTCCCCCTCTGC
66 CGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGA-CCGGGTCCCCCTCTGC
* * * * * *
744712 ATGCTGCCGATCCTGCTG-T-CACAACTTTCAGTCTAATCCGATCTTAGACTGGGAATGAACTCC
130 ATGCTGTCGATCCTGCTGCTGCA-ACCCTT-GGTCTGATCTGATCTTAGACTGGGAATGAACTCC
* * *
744775 GTATGCCTAA-CCAACCGACGGAACGAGC---G--GGCGGGTGGGCACTACGACGGCCAGAGAGA
193 GTATGCCTAAGCCAACC-A-GAAACGAGCAGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * * *
744834 CGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGAACATCTTCATATTTTTGT
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTTAT
*
744899 GTGCCAATGCCATTTTTATGGCTTGGAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
321 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
* * * ** *
744964 ACATGGCAAGATGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTAAGGTTCGGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTT
* * *
745029 TTAAAATTTTTTTC-GAAGGATTTTTGGTCCCAAACTTGGCAGACGTGATCCTTGTATTTTTATT
451 TTAAAA-TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATT
*
745093 GGCATGCACAAAAAAATTCAGCCAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
515 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
* * *
745158 GTGTCCCCA-TTCGAGACACTTTAATGGCTACTGGCAGTAAACCTATAAAATCTCAAATGCTTTT
580 GTGTCCCCATTTC-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTT
* * * * * *
745222 TAAGGGGGTGTGTGTTCTCAACGTTCGATGAGGGATAGGGGGCCAATATAAGGGCCAAATACTAG
644 TAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAG
* * * * * *
745287 CACCCATCACACATCATGTACGCACACCCCCCGGCCCCCCGATCGTTGGAACCCGAAGGCCGTCA
709 CACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCG
* * * * * **
745352 GTCAGGTTCTTCGGCAATGCTCCGGCGATGGTGCCTCGGCGAAAAAAAATACGATACCAGCACAT
774 GTCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACAT
* ** *
745417 GCCCGAGCTCAGCATGTGCTGCCGCAACCCTCAGTCCGGTCCGATCTTAGACTGGGAAT
839 GCCCGAGCCCAGCATGTGCTATCGCAACCCTGA-TCCGGTCCGATCTTAGACTGGGAAT
* * * * *
745476 GAACTCCATATGCTTAGACTGGGAAAGAACTCCGTATTCCTAGGTCAACCCACGAAATGAGCGTG
1 GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * *
745541 CGGGCGCTCATTCGGCC-GTGGAGGCGGGATGCACAAGCTGGGGATCAACTGGGTCCCCCTCTAC
66 CGGGCGCTCAGTCGGCCAGAGG-GGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGC
* * * *
745605 GTGCTGTTGATCCTGCTGCTGCAACCCTTGGTCTGATCTAATTTTAGACTGGGAATG-ACTACCG
130 ATGCTGTCGATCCTGCTGCTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACT-CCG
* * * * *
745669 TTTGCCTAAGCCAACCGATGAAACGAGC-GGGCGGGCGGGCGGGCACTATGCCGCCCAAAGAGAC
194 TATGCCTAAGCCAACC-A-GAAACGAGCAGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGAC
* * * *
745733 GGGTTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCAAATCTTCATATTTTTGTG
257 GGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTTATG
* *
745798 TGCCAATGCCATTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTT
322 TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTT
* *
745863 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAAATTTTTGCGGTTCGGGATTTTT
387 CATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTT
* ** *
745928 TAAAATTTTTTCAGAAGGAGTTTCAGCCCCAAGCTTGGTAGACGTGATCCTTGTATTGTTT-TTG
452 TAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT-TTTATTG
745992 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
516 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
* *
746057 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGGAAACCTGCAAAATCTCAAATGCTCTTTA
581 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
746122 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCTC-AGTACCAGC
646 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGC-CAAGTACCAGC
746186 ACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCC-ATCGTCGGAACCCCAATGCCGTCGG
710 ACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGG
* * *
746250 TCAGATTCTCCGGCGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATG
775 TCAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATG
* *
746315 CCCGAGCCCAGTATGTGCTATCGCAACCCTTGATCAGGTCCGATCTTAGACTGGGAAT
840 CCCGAGCCCAGCATGTGCTATCGCAACCC-TGATCCGGTCCGATCTTAGACTGGGAAT
* * *
746373 GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATTCCTAGGTTAACCCACGAAACGAGCGTG
1 GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * *
746438 CGGGCGCTCATTCGGCCGGAGGGGTGGGATGTGCAAGCCGGGGATCGACCTGGTCCCCCTCTACG
66 CGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCA
* *
746503 TGCTGTTGATCCTGCTGCTGCAACCCTTGGTCTGATCTGATTTTAGACTGGGAATGAACTCCGTA
131 TGCTGTCGATCCTGCTGCTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTA
* *
746568 TGCCTAAGCCAACCAATGAAACGAGCTAGGAGGCAGGCGGGCGGGCATTACGCTGGCCAGAGAGA
196 TGCCTAAGCCAACC-A-GAAACGAGC-A-G-GGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGA
* * * * *
746633 CGGGATGCGCAAGCCGTGCATTGATAGGGTGGTAGGTGAGTTTAGGCACATTTTCATATTTCTAC
256 CGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTTAT
* * *
746698 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTTCCTTATGGCTTCACGTGAAGTT
321 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTT
746763 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTT
386 TCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTT
* * * *
746828 TTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACCTGGTAGACATGATCCTTGTATTTTTGTTG
451 TTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTG
*
746893 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGCGTACAAGATTTTGTGACCATTTGAAAAAAG
516 GCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAG
*
746958 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTA
581 TGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA
*
747023 AGGGGGTGTGAGTTCCCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
646 AGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCA
* *
747088 CCGATTGCACATCATGTGCGCACACCCCCCGGCCCCCC-ATCGTCGGAACCCCAATGCCGTCGGT
711 CCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGT
* * ** * * *
747152 CAGGTTTTTCGGTGATGCTCCGGTGATGGTGCCCCGGTGAAGAATAATGCGGCACCAACACATGC
776 CAGGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGC
*** * * * * *
747217 CCGAGTGAAGCATGTACTATCGTAACCGTTGGTCCGATCCGATCTTAGACTGGGAAT
841 CCGAGCCCAGCATGTGCTATCGCAACC-CTGATCCGGTCCGATCTTAGACTGGGAAT
* * * * *
747274 GAACTCCGTATGCTTAGACTGGGAATAAACTCCGAATGCCTAAGTCAACCCACGAAACGAGCTTG
1 GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * ** **
747339 CAGGTGCTCAGCCGGCCAGAGCGACGGGATGCGCAAGCCAGGGATCGGTCGGGTCTGCCTCTGCA
66 CGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCA
* * *** *
747404 TGCTATCGATCCTACTGCCATAACCCTCGGTCT-A----ATC-----C----AAT----T--G-A
131 TGCTGTCGATCCTGCTGCTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTA
* * * *
747448 TG----A---AA-C-G-AGCGAGC-GGGCGGGCAGGCGGGCTCTACGCCGGCCAGAGAGACGGGA
196 TGCCTAAGCCAACCAGAAACGAGCAGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
747502 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTTGA-GTGC
261 TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTT-ATGTGC
*
747566 CAATGCCATTTCTATGGCTTGTAAATTCATACAATGGT-CCTTCAAGCCTTCACGTGAAGTTTCA
325 CAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTT-AAGCCTTCACGTGAAGTTTCA
* * *
747630 TGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGGGATTTTTTA
389 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTA
* *
747695 AAATTTTTTCGGAATGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTCTATTTTTATTGGCA
454 AAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCA
*
747760 TGCACAAAGAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
519 TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGT
* * *
747825 CCCCATTTCAAACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTCAGG
584 CCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGG
* ** * *
747890 GGATGTGAGTTCTC-AGGGTTTGATGAGGGATAGGGAACCAAAATAAGGGCCCAGTACCAGCACC
649 GGGTGTGAGTTCTCGA-GGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC
* ** * ** *
747954 CATCGCACATCATGGGCGCACACCCCCCGGCCCCCCGATCGTCGGAACTACAATGCCGCCTATTA
713 CATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCA
* * * * *
748019 GGTTTTTCGGCGATGCTTCGACGATGGTGCCTCGACGAAGAAAAATGTGGCACCAGCACATGCCC
778 GGTTCTTCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCC
* * *
748084 TAGCCCAGCATGAGCTATCGTAA--C----CC--TCC---C-T---CT--G-AT
843 GAGCCCAGCATGTGCTATCGCAACCCTGATCCGGTCCGATCTTAGACTGGGAAT
* *
748120 ----T-CA-AT-CTTAGACTGGGAATGAACTTTGTATGCCTAAGTCAACCCACGAAATGAGCGTG
1 GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
* * * * * * * * *
748178 CGGGCCCTCAGTCGACCAGAAGGGCAGGATGCGTAAGCCGGGGATCGATCGGGTCGCCTTCTGCC
66 CGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCA
* * *
748243 TGCTGTCGATCCTGCTGCTGCAACCCTCGGTCTGGTCTGATCTTAGACTGGGAATAAACTCCGTA
131 TGCTGTCGATCCTGCTGCTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTA
* * *
748308 TGCCTAAGCCAACCAACGAAAAGAGTAGCGGGC-GGACGGGCGGGCACTATGCCGGCCAGAGAGA
196 TGCCTAAGCCAACC-A-GAAACGAGCA--GGGCAGG-CGGGCGGGCACTACGCCGGCCAGAGAGA
748372 CGGGAT
256 CGGGAT
748378 TTTCAAAACT
Statistics
Matches: 2551, Mismatches: 286, Indels: 148
0.85 0.10 0.05
Matches are distributed among these distances:
839 124 0.05
840 2 0.00
841 1 0.00
842 1 0.00
844 3 0.00
846 2 0.00
847 1 0.00
849 3 0.00
852 1 0.00
853 4 0.00
856 3 0.00
857 1 0.00
858 2 0.00
859 1 0.00
860 3 0.00
863 5 0.00
864 483 0.19
865 96 0.04
867 2 0.00
868 7 0.00
869 1 0.00
871 1 0.00
872 5 0.00
873 2 0.00
874 2 0.00
875 35 0.01
876 1 0.00
880 3 0.00
881 1 0.00
883 1 0.00
887 3 0.00
891 1 0.00
892 6 0.00
893 155 0.06
894 22 0.01
895 2 0.00
896 3 0.00
897 330 0.13
898 474 0.19
899 7 0.00
900 6 0.00
901 745 0.29
ACGTcount: A:0.25, C:0.24, G:0.26, T:0.26
Consensus pattern (896 bp):
GAACTCCATATGCTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTG
CGGGCGCTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCA
TGCTGTCGATCCTGCTGCTGCAACCCTTGGTCTGATCTGATCTTAGACTGGGAATGAACTCCGTA
TGCCTAAGCCAACCAGAAACGAGCAGGGCAGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGA
TGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTTTATGTGCC
AATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATG
GCAAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTCGGGATTTTTTAAA
ATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTATTGGCATG
CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
CGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAATGCCGTCGGTCAGGT
TCTTCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGCCCGAG
CCCAGCATGTGCTATCGCAACCCTGATCCGGTCCGATCTTAGACTGGGAAT
Found at i:747289 original size:26 final size:26
Alignment explanation
Indices: 747260--747312 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
747250 CCGATCCGAT
* *
747260 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGAATG
747286 CTTAGACTGGGAATAAACTCCGAATG
1 CTTAGACTGGGAATAAACTCCGAATG
747312 C
1 C
747313 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGAATG
Found at i:748885 original size:26 final size:26
Alignment explanation
Indices: 748842--748894 Score: 63
Period size: 26 Copynumber: 2.0 Consensus size: 26
748832 CCAGTCTGAT
*
748842 CTTAGACTGCAAATGAACT-CTGTATG
1 CTTAGACTGCAAACGAACTGCT-TATG
**
748868 CTTAGACTGGGAACGAACTGCTTATG
1 CTTAGACTGCAAACGAACTGCTTATG
748894 C
1 C
748895 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 3, Indels: 2
0.82 0.11 0.07
Matches are distributed among these distances:
26 21 0.91
27 2 0.09
ACGTcount: A:0.28, C:0.21, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAGACTGCAAACGAACTGCTTATG
Found at i:749778 original size:26 final size:25
Alignment explanation
Indices: 749749--749801 Score: 88
Period size: 26 Copynumber: 2.1 Consensus size: 25
749739 TGTCCAATCT
749749 TAGACTGGGAATGAACTCCATATGCC
1 TAGACTGGGAATGAACT-CATATGCC
*
749775 TAGACTGGGAATGAACTCGTATGCC
1 TAGACTGGGAATGAACTCATATGCC
749800 TA
1 TA
749802 AGTCAACCCA
Statistics
Matches: 26, Mismatches: 1, Indels: 1
0.93 0.04 0.04
Matches are distributed among these distances:
25 9 0.35
26 17 0.65
ACGTcount: A:0.30, C:0.21, G:0.25, T:0.25
Consensus pattern (25 bp):
TAGACTGGGAATGAACTCATATGCC
Found at i:750181 original size:911 final size:899
Alignment explanation
Indices: 748383--752284 Score: 4927
Period size: 911 Copynumber: 4.3 Consensus size: 899
748373 GGGATTTTCA
* * *
748383 AAACTTTTTCCTGTTCGAGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTA
1 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TGGTA
* * * *
748448 GACGTGATCCTTGTATTTTTTTTGGCATGTACAAAACAATTCAACTAAAAACTCGAAATGTACAA
65 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * * * *
748513 GATTTTGCGACCATTTGAATAAAGTGTCCCCATTTCAAACACTTTAATGGCTATTGGCAGCAAAC
130 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAAC
748578 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
195 CTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGC
* * *
748643 CAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCGCCCCGGCCGCCCTG
260 CAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCGGCCCCCCCG
** * * * * *
748708 ATCGTTAGAACCCTAATGCCGCCA-TTCAGGTTCTCCGACGATGCTTCAGCGATGGTGCCCCGAC
324 ATCGTCGGAACCCCAATGCCG-CAGGTCAGGTTCTCCGACGATGCTCCGGAGATGGTGCCCCGAC
* * * *
748772 GAAGAAAAATGCGACACCAGCACATGCTCGAGCCCAGCATGTGCAGCCGCAACCCTTGATCCAGT
388 GAAGAAAAATGAGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCTGT
* ** * * * *
748837 CTGATCTTAGACTGCAAATGAACTCTGTATGCTTAGACTGGGAACGAACTGCTTATGCCTAAGTC
453 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTC
* * * * *
748902 AACCCACGAAATGAGCGTGCCGACGCTCAGCCGGCTAGAGGGGCGGGATGCGCAAGTCGGAGATC
518 AACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATC
* **
748967 GACCGGGTCCCCCTCTGCGTGCTGCCAATCCTGTT-GCTGCAACCCTCAGTCCTATTC-GATCTT
583 GACCGGGTCCCCCTCTGCGTGCTACCAATCCTGTTGGC-GCAACCCTCAGT-CTGGTCTGATCTT
* * * * *
749030 AGACTGGGAATGAACTTCGTATGCCTAAGCCAACCGACG-AAATGAGTGGGTGGGCGGGTGGGCA
646 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGGAGCGGGCGGGCGGGCGGGCA
* * * *
749094 TTACGCCGGTCGGAGAGATGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
711 CTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGC
*
749159 ACATCTTCATATTTCTGCATGCCTATGCCATTTTTATGGCTTGTAAATTCATACAATGCG-CCCT
776 ACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG-GTCCCT
* *
749223 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTCCTATTTTTCACGATTTTTA
840 TAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
749283 AAACTTTTTACGGTTCGAGATTTTTTAAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGT
1 AAACTTTTTACGGTTCGAGATTTTTT-AAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TGGT
* * * * *
749348 AGACGTGATCCTTGTATTTTTGTTGGCATGCCCAAAAAAATTTAG-TGAAAAACTCGAAGCGTGC
64 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCT-AAAAACTCGAAGTGTAC
* * *
749412 AAGATTTTGTAACCATTTGAAAAAAATGTCCCCATTTTAGACACTTTAATGGCTACTGGTAGCTA
128 AAGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC-A
* *
749477 AACCTGTAAAATTCTCGAAATGCTCTTTTAAGGGGGTGCGAGTTC-C-AGGTTTGGGGTGAGGGA
192 AACCTGTAAAA-TCTC-AAATGCTC-TTTAAGGGGGTGTGAGTTCTCGAGGTTT--GATGAGGGA
*
749540 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGC
252 TAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGC
* * * *
749605 CCCCCCGATTGCCGGAACCCCAATGCCGCCGGACAGGTTCTCCGGA-GATGCTCCGGAGATGGTG
317 CCCCCCGATCGTCGGAACCCCAATGCCGCAGGTCAGGTTCTCC-GACGATGCTCCGGAGATGGTG
* * * *
749669 CCCCGACGAAAAAAAATGAGGCACCAGCACATGCTCGAGCCCAGCATGTGCTGCTGGAACCCCTT
381 CCCCGACGAAGAAAAATGAGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAA-CCCTT
* * * *
749734 GGTCTTGTCCAATCTTAGACTGGGAATGAACTCCATATGCCTAGACTGGGAATGAACT-CGTATG
445 GGTCCTGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATG
* * * *
749798 CCTAAGTCAACCCATGAAACGAGCGTGCGTGCGCTCAGCCAGCCAGAGGGGCGGGATGCGCAAGC
510 CCTAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGC
* * * * * * *
749863 CGGGGATCGGCCAGG-CCCCCTCTGCCTGCTACCGATCCTGTTGGCGTAACCCTCGGTATGGTCT
575 CGGGGATCGACCGGGTCCCCCTCTGCGTGCTACCAATCCTGTTGGCGCAACCCTCAGTCTGGTCT
* *
749927 GATCTTACACTGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAACGAGCGGACGGGCGGGC
640 GATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--A--GGA---GCGGGC
*
749992 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGAAGCGCAAGCCGTGGATCGATAGGGTGGTA
698 GGGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* *
750057 GGTGCGTTTAGGCACATCTTCATATTTCTGTATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
763 GGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * *
750122 ACAATGGTCCCTTAAGCCTTCACATGAAGTTTCATGGCAAGATGACCCATTTTCTATTTTTCACG
828 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACG
750187 ATTTTTG
893 ATTTTTG
* * * * *
750194 AAACTTTTTGCGGTTTGGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCGAAACTAGGTA
1 AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT-GGTA
*
750259 GACATGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
65 GACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAA
* * * * *
750324 CATTTTGTGACCATTTTAAAAAATTGTCCCCATTTTAGACACTTTAATGGCTACGGGC-GCCAAA
130 GATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG-CAAA
* * *
750388 CTTGTAAAATCTGAAATGCTCTTTAAAGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
194 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** * * * **
750453 ATATTATACGGGCCAAGTGCCAGCACCCATCGCACATCATGTGCGCACACCCCTCCCCCCCGACC
259 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCC-CCCGGCC--CC
* ** *
750518 GCCCGATCGTCGGAACCTCAATGCCGCAGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCC
320 -CCCGATCGTCGGAACCCCAATGCCGCAGGTCAGGTTCTCCGACGATGCTCCGGAGATGGTGCCC
* * * * * * * * *
750583 CGGCGAAGAAAAATGCAG-CACCAGCACATGCCCAAGCCCAGTAAGGGCTGCTGCAACCC-TCGA
384 CGACGAAGAAAAATG-AGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTTGGT
* * **
750646 CCTGATCCGATCTTAGACTAGGAATGAACTCCGCATGCTTAGACTGGGAATGAACTCCGTAAACC
448 CCTG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCC
* * * * * *
750711 TAAGTCAACCCACGAAATGAGCGTGCGGGCGCTTAGCCGGCCAGAGCGGTGGGATACGTAAGCTG
512 TAAGTCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCG
* * * * * * * *
750776 AGGATCGACCGGGTCCCCCTCTGTGTGCTATCAATCCTGCTGCCACAACCCTCGGTTTGGTCTGA
577 GGGATCGACCGGGTCCCCCTCTGCGTGCTACCAATCCTGTTGGCGCAACCCTCAGTCTGGTCTGA
*
750841 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGAC-AAAATGA----GCGGGCGGGCG
642 TCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGGAGCGGGCGGGCGGGCG
* * ** * * * *
750901 TGCATTACGCAAGCCAGAGAGATGGGATGCGTAAGCCGTGGATCGATAGGGTGGTAGCTGGGCTT
707 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * * *
750966 AGGCACATCTTTATATTTCTACGTGCCAATGCCATTTTTATGGC-T-TAAATTCATACAATGTTC
772 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* *
751029 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCAATTTTTCATGATTTTTG
837 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * * *
751092 AAACTTTTTACTGTTC-AGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTCGTCCCAAACTTGGT
1 AAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAC-TGGT
*
751156 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
64 AGACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* *
751221 AGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACATTTTAATGGCTATTGGCAGCAAA
129 AGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
751286 CCTGTAAAATCTCAAATGCTCTTTAAGGGGATGTGAGTTCTCGAGGTTTGATGAGGGAGAGGGGG
194 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
*
751351 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTACGCACACCCCCCGGCCCCCCCG
259 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCG
* * **
751416 ATCGTCGGAACCCCAATGCCGCAGGTCAGGTTCTCCGATGATGCT-CTGATGATGGTGCCCCGGT
324 ATCGTCGGAACCCCAATGCCGCAGGTCAGGTTCTCCGACGATGCTCCGGA-GATGGTGCCCCGAC
* *
751480 GAAGAAAAAT-ACGACACCAGCACATGC-CTGAGCCCAGCATGTGCTGCCACAACCCTTGGTCCG
388 GAAGAAAAATGA-GACACCAGCACATGCTC-GAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCT
* * *
751543 GTCCGATCTTAGACTGGGAATGAACTCCCTATGCTTAGACTCGGAATGAACCCCGTATGCCTAAG
451 GTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAG
* * * *
751608 TCAACCCACGAAATGAGCGCGCGGGCGCTCAGCCGGCCAGAGGGGTGGGATGCACAAGCCGGTGA
516 TCAACCCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGA
** * ** * ** * * * *
751673 TCGGTCGGGTCCCCCTCTGTGTGCTTTCGATCCTGTTGTAGTAACCCTCATTCCGGTCCGATCTT
581 TCGACCGGGTCCCCCTCTGCGTGCTACCAATCCTGTTGGCGCAACCCTCAGTCTGGTCTGATCTT
* * * *
751738 AGACTGGGAATGAATTTCATATGCCTAAGCCAACCGACGAAACGAGCG-GACGGGCGGGCGGGTG
646 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAA--AG-GAG-CGGGCGGGCGGGCG
* *** * * * * * *
751802 GGCGCTACATTGACTAGAGAGACGGGATGCACAAGCCATGGATCGATAGGGTGGTTGGTGGGTTC
707 GGCACTACGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT
* * *
751867 AGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTGATACATTGGTC
772 AGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTC
* * *
751932 CCTTAAGCCTTCACGTGAAGTTTGATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTCG
837 CCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
* * *
751995 AAACTTTTTGCGGCTC-AGGATGTTTTAAAA----TT---------TTTT----------TGGTA
1 AAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTGGTA
* * * * *
752036 GACATGATCCTTGTATTTTTGTT-GTATTGCACAAAAATATTCAGCTAAAAACTCGAAGCGTACA
65 GACGTGATCCTTGTATTTTTTTTGGCA-TGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACA
* ** * *
752100 AGATTTTGTGGCCATTCCAAAAAATTGTCCCCATTTCAGACACTTTAATGGCTAGTGGCAGCAAA
129 AGATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
* *
752165 CCTGTAAAATTTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATAAGGGATAGGGGG
194 CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
** *
752230 CCAATATAAGGGTGAAGTACCAGCACCCATCGCACATCATGTGCACACACCCCCC
259 CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCC
752285 TCGGCATTTT
Statistics
Matches: 2617, Mismatches: 328, Indels: 135
0.85 0.11 0.04
Matches are distributed among these distances:
878 2 0.00
879 231 0.09
890 4 0.00
891 1 0.00
892 4 0.00
893 302 0.12
894 10 0.00
896 6 0.00
897 4 0.00
898 348 0.13
899 5 0.00
900 131 0.05
901 244 0.09
902 16 0.01
903 186 0.07
904 193 0.07
905 136 0.05
906 76 0.03
907 14 0.01
908 16 0.01
909 19 0.01
910 198 0.08
911 387 0.15
912 84 0.03
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (899 bp):
AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTGGTAG
ACGTGATCCTTGTATTTTTTTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAG
ATTTTGTGACCATTTGAAAAAAATGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACC
TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCCGAT
CGTCGGAACCCCAATGCCGCAGGTCAGGTTCTCCGACGATGCTCCGGAGATGGTGCCCCGACGAA
GAAAAATGAGACACCAGCACATGCTCGAGCCCAGCATGTGCTGCCGCAACCCTTGGTCCTGTCCG
ATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAAC
CCACGAAATGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGAC
CGGGTCCCCCTCTGCGTGCTACCAATCCTGTTGGCGCAACCCTCAGTCTGGTCTGATCTTAGACT
GGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAAAGGAGCGGGCGGGCGGGCGGGCACTACG
CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTG
Found at i:751588 original size:26 final size:26
Alignment explanation
Indices: 751550--751602 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
751540 CCGGTCCGAT
*
751550 CTTAGACTGGGAATGAACTCCC-TATG
1 CTTAGACTCGGAATGAAC-CCCGTATG
751576 CTTAGACTCGGAATGAACCCCGTATG
1 CTTAGACTCGGAATGAACCCCGTATG
751602 C
1 C
751603 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 3 0.12
26 22 0.88
ACGTcount: A:0.26, C:0.26, G:0.23, T:0.25
Consensus pattern (26 bp):
CTTAGACTCGGAATGAACCCCGTATG
Found at i:752317 original size:4 final size:4
Alignment explanation
Indices: 752308--752341 Score: 50
Period size: 4 Copynumber: 8.5 Consensus size: 4
752298 GGATGTGCAA
* *
752308 GCGG GCGG GCGA GCGG GCGG GCGG ACGG GCGG GC
1 GCGG GCGG GCGG GCGG GCGG GCGG GCGG GCGG GC
752342 ACTATGCCGA
Statistics
Matches: 26, Mismatches: 4, Indels: 0
0.87 0.13 0.00
Matches are distributed among these distances:
4 26 1.00
ACGTcount: A:0.06, C:0.26, G:0.68, T:0.00
Consensus pattern (4 bp):
GCGG
Found at i:754362 original size:755 final size:757
Alignment explanation
Indices: 752908--754421 Score: 2173
Period size: 755 Copynumber: 2.0 Consensus size: 757
752898 ATGGTGCCCT
* * * *
752908 GGCGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAACATGTGCTGCCGTAACCCTCGGTCC
1 GGCGAAGAAAAACACGGCACCAGCACATGCCCAAGCCCAACATGTGCTGCCGCAACCCTCGATCC
* *
752973 GGTCTGATCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGG
66 GGTCTCATCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGG
** * **
753038 CGGTCAGCCGGCTAAAGGGGTGGGATGCGCAAGCCGGGGACCAGCCGGGTCCCCCTCTGCGTGCT
131 CACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGACCAGCCGGGTCCCCCTCTGCGTGCT
* * *
753103 GCCGATCCTGTTGCCATAACCCTCGGTTCGGTCTAACCTTAGACTGGGAATGAACTCCGTATGCC
196 GCCGATCCTGCTGCCACAACCCTCGGTTCGATCTAACCTTAGACTGGGAATGAACTCCGTATGCC
* *
753168 TAAGCCAACAGATGAAACAAACGGGCAGGCGGGCGGGCGAGCACTACGCCGGCCAAAGAGACGGG
261 TAAGCCAACAGATG--A-AAACGAGCAGGCGGGCGGGCGAGCACTACGCCGACCAAAGAGACGGG
* * *
753233 ATGCGCAAGTCGTGGATCGATAGGGTGCTAGGTCGGTTTAGGTACATCTTCATATTTTTGCATGC
323 ATGCGCAAGCCGTGGATCGATAGGGTGCTAGGTCGGTTTAGGCACATCTTCATATTTTTACATGC
* * *
753298 CAATGCCGTTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
388 CAATGCCATTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCAT
* * *
753363 GGCAAGACGACTCATTTTTTATTTTTCACGTTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAA
453 GGCAAGACGACTCATTTTCTATTTTTCACGTTTTCAAAACTTTTGACAGTTCGAGATTTTTTAAA
* * *
753428 ATTTTTTCAGAAGGACCTCTGTCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGTATA
518 AATTTTTCAGAAGGACCTCTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATA
753493 CACAAAAAAATTCAGCTAAAAAATCAGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
583 CACAAAAAAATTCAGCTAAAAAATCAGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
753558 CCATTTCAGACACTTCAGTGGCTACTGCCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGG
648 CCATTTCAGACACTTCAATGGCTACTGCCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGG
753622 GTGCGAGTTCTCAAGGTTTGA-TGAGGGATAGGGGGCCAATATAAA
713 GTGCGAGTTCTCAAGGTTT-ATTGAGGGATAGGGGGCCAATATAAA
** **
753667 GGCGAAGAAAAACGTGGCACCAGCACATGCCCAAGCCCAGTATGTGCTGCCGCAACCCTCGATCC
1 GGCGAAGAAAAACACGGCACCAGCACATGCCCAAGCCCAACATGTGCTGCCGCAACCCTCGATCC
* * * *
753732 GAT-TCCATCTTACACTGGGAATGAACTGCGTATGCCTAAGTCAACGAACGAAATGAGCGTGCGG
66 GGTCT-CATCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGG
* * * * *
753796 GTACTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATC-GACTGGGTCCCCCTCTGGGTG
130 GCACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGACCAG-CCGGGTCCCCCTCTGCGTG
* * * ** *
753860 CTGTCGATCCTGCTGCCACAACCCTTGG-TCTGATCTGATTTTAGACTGGGAATGAACTTCGTAT
194 CTGCCGATCCTGCTGCCACAACCCTCGGTTC-GATCTAACCTTAGACTGGGAATGAACTCCGTAT
* * * * *
753924 GCCTAAGCCAACCGATG-AAACGAGCGGGCGGGCGGGC-AGGCACTATGCCGACTAGAGAGACGG
258 GCCTAAGCCAACAGATGAAAACGAGCAGGCGGGCGGGCGA-GCACTACGCCGACCAAAGAGACGG
* * * *
753987 GTTGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACGTG
322 GATGCGCAAGCCGTGGATCGATAGGGTGCTAGGTCGGTTTAGGCACATCTTCATATTTTTACATG
* *
754052 CCAATGCCATTTTTAAGGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTGA
387 CCAATGCCATTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCA
* ** * *
754117 TGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTGGCAGTTTGAGA-TTTTTA
452 TGGCAAGACGACTCATTTTCTATTTTTCACG-TTTTCAAAACTTTTGACAGTTCGAGATTTTTTA
*** * *
754181 AAAATTTTTCAGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCA
516 AAAATTTTTCAGAAGGACCTCTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCA
* *
754246 TGCACAAAAAAATTCAGCTAAAAACTC-GAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
581 TACACAAAAAAATTCAGCTAAAAAATCAG-AGTGTACAAGATTTTGTGACCATTTGAAAAAAGTG
* * * *
754310 TCCCCATTTCAGAGACTTTAATGGCTACTGGCAGGAAACCTGCAAAATCTCAAATGCTCTTTAAG
645 TCCCCATTTCAGACACTTCAATGGCTACTGCCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAG
* *
754375 GGGGTGTGAGTTCTCGAGGTTTATTGAGGGATAGGGGGCCAATATAA
710 GGGGTGCGAGTTCTCAAGGTTTATTGAGGGATAGGGGGCCAATATAA
754422 GGGCCAAGCA
Statistics
Matches: 669, Mismatches: 78, Indels: 19
0.87 0.10 0.02
Matches are distributed among these distances:
754 2 0.00
755 367 0.55
756 63 0.09
758 4 0.01
759 233 0.35
ACGTcount: A:0.26, C:0.22, G:0.25, T:0.26
Consensus pattern (757 bp):
GGCGAAGAAAAACACGGCACCAGCACATGCCCAAGCCCAACATGTGCTGCCGCAACCCTCGATCC
GGTCTCATCTTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCAACGAAACGAGCGTGCGGG
CACTCAGCCGGCCAAAGGGGCAGGATGCGCAAGCCGGGGACCAGCCGGGTCCCCCTCTGCGTGCT
GCCGATCCTGCTGCCACAACCCTCGGTTCGATCTAACCTTAGACTGGGAATGAACTCCGTATGCC
TAAGCCAACAGATGAAAACGAGCAGGCGGGCGGGCGAGCACTACGCCGACCAAAGAGACGGGATG
CGCAAGCCGTGGATCGATAGGGTGCTAGGTCGGTTTAGGCACATCTTCATATTTTTACATGCCAA
TGCCATTTTTAAGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
AAGACGACTCATTTTCTATTTTTCACGTTTTCAAAACTTTTGACAGTTCGAGATTTTTTAAAAAT
TTTTCAGAAGGACCTCTGGCCCCAAACTTGGTAGAAGTGATCCTTGTATTTTTGTTGGCATACAC
AAAAAAATTCAGCTAAAAAATCAGAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
TTTCAGACACTTCAATGGCTACTGCCAGCAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTG
CGAGTTCTCAAGGTTTATTGAGGGATAGGGGGCCAATATAAA
Found at i:754637 original size:26 final size:26
Alignment explanation
Indices: 754601--754653 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
754591 CTGGTCCAAT
*
754601 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
754627 CTTAGACTGGGAATAAAGTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
754653 C
1 C
754654 CTAAGTCAAT
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:758158 original size:890 final size:891
Alignment explanation
Indices: 753740--767453 Score: 9260
Period size: 890 Copynumber: 15.2 Consensus size: 891
753730 CCGATTCCAT
* * ** * **
753740 CTTACACTGGGAATGAACTGCGTATGCCTAAGTCAACGAACGAAATGAGCGTGCGGGTACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
753805 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGACTGGGTCCCCCTCTGGGTGCTG-TCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * * * * * *
753869 CTGCTGCCACAACCCTTGGTCTGATCTGATTTTAGACTGGGAATGAACTTCGTATGCCTAAGCCA
130 CTGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * * * * * *
753934 ACCGATGAAACGAGCGGGC--G-G-GCGGGCAGGCACTATGCCGACTAGAGAGACGGGTTGCGCA
195 ACTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *
753995 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTACGTGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
* * *
754060 ATTTTTAAGGCTTGTAAATTCATACAATTGTCCCTTAAGCCTTCACGTGAAGTTTGATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* ** * * *
754125 CGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTGGCAGTTTGAGA-TTTTTAAAAATTTT
390 CGACTCG---T-TA-TTTT--C----TAT-AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* *
754189 TCAGAAGGTGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAA
443 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAA
754254 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
507 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
754319 CAGAGACTTTAATGGCTACTGGCAGGAAACCTGCAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
572 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
*
754384 GTTCTCGAGGTTT-ATTGAGGGATAGGGGGCCAATATAAGGGCCAAGCACCAGCACCCATCGCAC
637 GTTCTCGAGGTTTGA-TGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * *
754448 ATCATGTGCG-A-ACACCCCCCGGCCCCCCGGATCGTCGGAACCCCAAT---GT-GG-CCGG---
701 ATCATGTGCGCACACCCCCCCCGGCCCCCC-GATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
* * ** *
754503 T-C-A-GGTTCTCCGACGATGGTGCCCCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCC
765 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
* * * *
754565 CAGTATGTGCTGCCGCAACCCTTGGTCTGGTCCAATCTTAGACTGGGAATTAACTCCGTATG
830 CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
754627 CTTAGACTGGGAATAAAGTCCGTATGCCTAAGTCAATCCACGAAACGAGCGTGAGGGTGCTCAAC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * * **
754692 CGGCCAGAGGGGTGGGATGCGCAAGCCAGGGATCGGTCAGGTCCCCCTCTGTGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
** * *
754757 TGCTACCGTAATCCTT-AGTCCGATCCGATCTTAGACT-GGAATGAACTCCGTATGCCTAAGCCA
131 TGCTACCACAACCCTTGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
754820 ACCGACGAAACGAA-CAGGCGGG-TAGGTGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
195 ACTGACGAAAC-AAGCGGGCGGGCGA-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* *
754883 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGGACATCTTCATATTTCTATTTGCCAATG
258 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATG
754948 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
323 CCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAA
* ** * *
755013 GACGACTCGTTTTCTATTTTTCACGATTTTGAAACTTTTTGTGGTTTGGGATTTTTTAAAATTTT
388 GACGACTCG---T-TA-TTTT--C---TAT-AAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
** * *
755078 TTCGGAAAAAGGTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAA
442 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAA
* *
755143 AAAATTCAGCTAAAAACTCGAGGTGTACAAGATTTTGTGACCTTTTGAAAAAAGTGTCCCCATTG
507 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT-
755208 T-AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
571 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* * * *
755272 ACTTCTCGAGGCTCGATGAGGG-TCAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCACA
636 AGTTCTCGAGGTTTGATGAGGGAT-AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* *
755336 CATCATGTGCGCACACCCCCCCCGGCCACCCCGATCACCGGAACCCCAATGCCGCCGGTCAGGTT
700 CATCATGTGCGCACACCCCCCCCGGCC-CCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* * * **
755401 CTCCGACAATGGTCCGGCGATGGTGCCCCGACGAAGAAAAATACGGCACCAGCACATGCCCGA-C
764 CTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
* *
755465 CTAGCATGTGCTGCCGCAA--C-C---C---TCAG-TC-----C--GG--T----T-CG-AT-
829 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
755502 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCATCCCACTAAATGAGCGTACGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * * *
755566 CGACAAAAGGGGTAGGATGCACAA-CCGAGGATCGGCC-GGTCTCCCTCTGCGTGCTACCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCT-GCTGATC
* * ** * * *
755629 CTTGCTGTCCACAACCCCTCCGATTCTAGTCTGAATCTTTAGACTGCGAAATGAACTCCGTAAGC
130 C-TGCT-ACCACAA-CCCT-TGA-TCCGGTCCG-ATC-TTAGACTG-GGAATGAACTCCGTATGC
* * * *
755694 CTAAGCCAACTGACCG-AA-AA-TGAGCGGGC--G-GGACGGGCACTACACCGGCTC-GAGAGAC
187 CTAAGCCAACTGA-CGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGC-CAGAGAGAC
* *
755752 GGGATGCGCAAGCCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGT
250 GGGATGCGCAAG-CCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTAT
755817 GTGCC-ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CTTCACGTGATAGT
314 GTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA-AGT
755880 TTCATGGCAAAGAC-AGCTCGTTTCATATTTTCATGATTTTGAAACTTTTTTACGGTTCGA-ATT
378 TTCATGGC-AAGACGA-CTCG--T--TATTTTC-T-A---T-AAAC-TTTTTACGGTTCGAGATT
* * *
755943 TGTTT-AAA-TTTTTCGGAAGCATTTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
430 T-TTTAAAATTTTTTCGGAAGGA-GTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTT
* * * *
756006 CTTGGCATGCACAAAACAATTCAGCTAAAATCTCGAAGTGTACAAGATTTTGTGACCATCTGAAA
493 GTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAA
*
756071 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTC
557 AAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTC
* * * *
756136 TTTAAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATCTAAGGGCCAAGTGCC
622 TTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACC
* * * *
756201 AGCACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCACCCGATTGTCGAAACCCCAATGT
687 AGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCC-CCCGATCGCCGGAACCCCAATGC
* * *
756265 CGTCGGTCAGG---T-------T-CTCCGACGATGGTGCCCCGACGAAGAAAACTGTAGCCCCAG
751 CGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAG
* * ** * * *
756319 CACATGCCCGAGCCCAGCATCTACTTTCGCAACCCTCAGTTTGGTCTGATCTTAGACTGGGAATG
816 CACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATG
756384 AACTCC-TATG
881 AACTCCGTATG
** * * * *
756394 CTTAGACTACGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCACTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
756459 CAGACAGAGGGGCGGGATGCGCAAGCCGAGGATAGATCGGGTCCCCCTCTACGTGCTGCCGATCA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * * * *
756524 TGCTACCGCAACCCTTGGTCAGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* ** * * * * * * **
756589 CCGACGAAATGAGGGGGCGGGCGGGCGCGTGGGCATTACGTCGGCCAGAGAGATAGGATGCGCAA
196 CTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * * *
756654 GTCGTGGATCGATAGGGTGGTAGGTGAGTTTACGCACATCTTCATATTTCTGTGTGCCAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCA
* *
756719 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACATGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
756784 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTT
391 GACTCG---T-TA-TTTTC-T-A----T-AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTT
* **** *
756849 TGGAAATCCTTTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTGTTTTTGTTGGCATGCACAA
444 CGG-AA-GGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AA
*
756914 AAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
506 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
756979 TCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTG
571 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
757044 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACCAGCTCCCATCGCAC
636 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * ** *
757109 ATCATGTGCGCACACCTCCCCCGGCCCCCCCGATCGTCGGAACCCCAATTTCGTTGGTCAGGTTC
701 ATCATGTGCGCACACCCCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
* * * *
757174 TCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATATGGCACCAGCACATGCTCGAGCC
765 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
* * *
757239 CAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACAGGGAATGAACTCCGTATG
830 CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
757301 CCTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGTTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** *
757366 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCCCGGTCCAACTCTACGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * * ** * *
757431 TGCTACCACAACCATTGATCCGGTCCAATCTTAGACAGCAAATGAACTCTGTATACCTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
757496 CTGACAAAACAAGCGGGCGGGCGAGCGGGCGGGCACTGCGCCGGCTAGAGAGATGGGATGCGCAA
196 CTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
*
757561 GCCGTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCA
*
757626 TTTTTATGGCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * * *
757691 GACCCG-TATTTTC-A-AAACTTTTTGCGGTTCGAGATTTTTTAATATTTTTTTGGAAGGATTTT
391 GACTCGTTATTTTCTATAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTT
* *
757753 TGGCCCCAAACTTGGTAGATGTAATCCTTGTATTTTTGTTGGCATGCAAAAAAGAATTCAGCTAA
456 TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAA-AATTCAGCTAA
757818 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
520 AAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAAT
* * *
757883 GGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTACTCGAAGTTT
585 GGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTT
* * *
757947 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATAGCACATCATGTGCACTCA
650 GATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA
* *
758012 CCCCCTCCCGGCCCCTCCGATCGCCGGAACCCCATTGCCGTCGGTCAGATTCTCCGACGATGCTC
715 CCCCC-CCCGGCCCC-CCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTC
** * *
758077 CGACGATGGTGCCCCGGTGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCAGCATGTGCTAC
778 CGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGC
* * * *
758142 CGCAACCCTAGGTCTGGTCTGATCTTAGTCTGGGAATGAACTCCATATG
843 CGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
758191 CTTAGACTTGGAATGAACTCCATATCCCTATGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * **
758256 CGGCCAGATGGGTGGGATGCACAAGCTGAGGATCGACTGTGTCCCCCTCTATGTGCTG-TCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * * * * * * **
758320 CTACTATCGCAACCCTTGATCCGATCCGATCTTATATTGGGAATGAACTCTGTATGCCTAAGAAA
130 CTGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * * *
758385 ACTGACGAAACGAGCGGAC--G-G-GCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGTGCA
195 ACTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * ***
758446 AGCCGTTGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
758511 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * *
758576 CGACCCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAATATTTTT
390 CGACTCG---T-TA-TTTT--C---TAT--AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * * * *
758641 TTGGAAGTAATTTTAGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCAAAAC
443 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAA-
758706 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
507 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
758771 CAGACGCTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTACGGGGGTGTGA
572 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
758836 GTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
637 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * ** *
758901 TCATGTACGCTCACCCCCTCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCAGTCAGGTTC
702 TCATGTGCGCACACCCCC-CCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTC
** * ** * * *
758966 T-CGGTGATGCTCCGACGATGGTTCCCCGGTGAAGAAAAATGTGGCTCCAGCACATGCTCGTGCC
765 TCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
* * * ** *
759030 CAGCATGTGCTGTCACAACCCTCGGTCTGGTCTGATCTTAGTTTGGGAATGAACTCAGTATG
830 CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * *
759092 CTTAGACTGGGAATGAACTCCGTATGCCTAAATCAACCCGCGAAATGACCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
759157 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGAATTGATCGGGTCCCCCTCTGTGTGCTG-TCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * * ** *
759221 CTGCTACTACAACCC-TCAGTCCGTTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTACCACAACCCTTGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* * * * *
759285 AACAAATGCCCGATCGTCGGAACCCCAATGCCGTTGGTCAGGTAATCCGATGAAGAAAAATGC-A
194 AAC---T----GA----C-GAA--ACAA-G-CG--GG-C-GG----GCGA-G-CG-----GGCGG
* * * * * * * ** * **
759349 GCACCA-GCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CCCTCGG-TCCGATCTGATCTTAG
228 GCACTACGC-C-GGCCAGAG---AG-ACGGGATG-CGCAAGCCGT-GGAT-CGATAGGGTGGTAG
* * * * * ** * *** * * * *
759411 ATTGGG--AATG-A-A-CTTCATA-TGCTTAGGTTGGGAATG-AAGTCCGTATGCCTAAGTCAAC
284 -GTGGGTTTAGGCACATCTTCATATTTC-TATG-TGCCAATGCCA-TTTTTATGGCT-TGTAAAT
* * * * *** *
759469 CCACGA-AATGAG--CGTGTAGGCGC-TCA-GATGGCTAGAGGGGCGGGATGCGCAAGCCGGGGA
344 TCA-TACAATG-GTCCCT-TAAGC-CTTCACG-T-G--A-AGTTTC---ATG-GCAAGAC---GA
*** ** ** ** * *** * * ** * * ** ** * **
759529 -TCGATCGGGTCCCCCTCTACGTGCCACTGATCTTGCTGTTGCAACCCTCAATTTGGTCCGATCT
393 CTCG-T-TATTTTCTATAAACTTTTTACGGTTCGAGATTTTTTAA-----AATTTTTTCGGA-AG
* * * ***** ** * * * * ***** ** * *** **
759593 TAG-ATAGGGAATGAACTCCGTATG-CCTAAGTCAATCGATGAAACAAGCGGGCAGGCGGGCACT
450 GAGTTTTGGCCCCAAACTTGGTA-GACGTGA-TC-CTTG-T-ATTTTTGTTGGCATGC-AAAAAA
*** * * * * ** * * * * * * ***** * *
759656 ACGCCGGCTAGAGAGAC-GGGA-TGCGCAAGCTGTGGATCGACAAGGTGGTAGGTGGGTTTAGGC
509 AATTCAGCTA-A-AAACTCGAAGTGTACAAGATTTTG-T-GACCA-TTTG-AAAAAAGTGT--CC
* * * * * * * ** * * *
759719 ACATCCTC--ATATTTCTACAT-GCCAATGCCA-CTTTTATGGCTTGTAAATTCAT-ACAATGGT
566 CCAT-TTCAGACACTT-TA-ATGGCTACTGGCAGC----A-AACCTGTAAAATC-TCA-AATGCT
*** * * *
759779 CTCTTAA-GCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCAGACACTTTAATGGCTAC
621 CT-TTAAGGGGGT---GTG-AG-TTC-T--C--GA-G----G-TTT--G--A---TGAGGGATA-
** * *** * * * ****** *
759843 TGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGATAGGGGGC-CAAT-ATAAGGGCCAT
661 -GGGGGCCAA--TATAAGGGC-CAAGTAC-C----A-GCACCCATCGCAC-ATCAT--GTG-C--
* * * *** * ** * ** * *** ***
759906 GTACTAGCACCCATTGCACATC-ATATGCACACACCCCCCGGGCCCCTGATC-GTCAGAACCT-C
710 GCAC-ACCCCCCCCGGCCCCCCGAT-CGC-CGGAACCCCAATG--CC-G-TCGGTCAGGTTCTCC
* * * **
759968 -A--ATGCCACCGGTCAGGTTCCCCGGTGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAATGT
768 GACGATG-CTCC-G--ACGAT--GG-------------------TGCCCCGACGAAGAAAAATGT
* * ** *
760030 GGCACCAGCACATGCCCGAGCCCTGCATGTGCTACCATAACCCTCGGTCCGGTCCGATCTTAGAC
808 GGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGAC
*
760095 TGGGAATGAACTTCGTATG
873 TGGGAATGAACTCCGTATG
* *** *
760114 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTATTGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
760179 CGACCAGAGGGGCATGATACGCAAGCTGGGGATCGATCGGGT---CC-CT-C-T-CTGC-G----
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * *
760232 TGCTACCGCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACT-CTTATGCTTAGACTGG
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGC-----CT--
* * * *** *** * *
760296 GAATGAACTCCATA-TGCCTAAGTCAA-CCCACGAAATGAGCGTGCGGGCACT-CAACCGGCCAG
189 -AA-G----CCA-ACTGACGAA-ACAAGCGGGCG-GGCGAGCGGGCGGGCACTAC-GCCGGCCAG
* * * * * * ****** ** * * *
760358 AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCT-GCCGATCCTGCTGT
244 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGT-GGTAGGTGGGT-TTAGGC-A-CAT-CT-T
** *** ** ** * * ** ** * *
760422 CGCAACCCTCGGT-CCGGTTCGATCTTAGACTGGGAATG-AACTTCGT---AT-G--CC-TAAG-
303 CATATTTCTATGTGCCAATGCCAT-TTTTA-T-GGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *** * * ***** * *
760477 C-TAACTGATGAAACGAAATGGGTGGGCGGGCAGGCGGGCACTACG--CCCGGCCAGAGAGA-TG
365 CTTCAC-G-TG-AA-G--TTTCAT-GGC---AAGAC--G-ACT-CGTTATTTTCTATA-A-ACT-
*** * * * * * * ** * * * *
760538 GGATGCGCAAG-TCGTG--TATTGATAGA-GTGGTAGG-TGG-GTTTAGGCACATCTTCATA-TT
413 TTTTACG---GTTCGAGATTTTTTA-AAATTTTTTCGGAAGGAGTTTTGGC-C--C--CAAACTT
** * * * * * * * **
760596 --TCTACGTG--CCAATGTCATTTTT-ATGGCTTGTAAATTCATACAATGGTC-CCTTAAGCCTT
469 GGTAGACGTGATCC-TTGT-ATTTTTGTTGGCATGCAAA---A-AAAAT--TCAGCTAAAAAC-T
* * * ***** ** * * * *
760655 C-ACGTG---AAG-TTTCATGACAAGACGACTCTTTTTCTATTTTTCACGATTTTCA-AAACTTT
525 CGAAGTGTACAAGATTT--TG---TGACCA-T-TTGAAAAAAGTGTCCCCA-TTTCAGACACTTT
* * * *** * * ** * * ***
760714 -TTGGGGT-TTGG--G--ATTTTTTAAAATTTTTTTGGAAGGCTTTTTGGCCCAAAACTTGGTAG
582 AAT-GGCTACTGGCAGCAAACCTGTAAAA----TCTCAAATGCTCTTT-------AAGGGGGT-G
* * * ** * * ****** * * *** * * *
760773 ACCTGA-TACTTGTATGTTTCTTCGCATGCATAAAAAAATTCAGCTAAAAACTCGAACTATACAA
634 ---TGAGTTCTCG-AGGTTTGAT-G-AGGGAT--AGGGGGCCA-ATATAAGGGCCAA--GTACCA
* * * ** * * ****** ** ** *
760837 G-ATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
688 GCA-------CCCA-TCGCACATCA-TGTGCGCA---C--AC-CCCCCCCGGCCCCCCG-ATC--
* * * * * ** * * * *
760900 ACCTGTAAAATCTCAAATGCTCCTTAAGTGGGTGTGAGTTCT-CGAGGTTTGAT--GAGGGATAG
735 GCC-G--GAA-CCCCAATG--CC----GTCGGTCAG-GTTCTCCGACG-ATGCTCCGA-CGAT-G
* * * * * * * * * *
760962 G-G----GGCCAA-TATAA-G-GGC-CAAGTACCA-GCACCCATCACA-CATCATGC-G-CGCAC
786 GTGCCCCGACGAAGAAAAATGTGGCACCAGCA-CATGC-CCGAGCCCAGCAT-GTGCTGCCGCA-
* * ** * *** * *
761014 ACCCCCCCGATC--CCCCGATCTTCGAAAC-CCCAATG-CCGCCGGTCA-G
847 A--CCCTCGGTCTGGTCCGATCTT--AGACTGGGAATGAACTCC-GT-ATG
* ** * * * * *** *
761060 GTT---CTCCG-ATGACGCTCCG-ATG-AT-GGTGC--CCC-GGCAAA-GAAAAATAC--G-G--
1 CTTAGACTGGGAATGA-ACTCCGTATGCCTAAGT-CAACCCACG-AAACG-AGCGTGCGGGCGCT
** * * ** * ** * **
761109 CA-CC-ATCACA--TGCCCGA-GC-CCAGCATGTGAT-G-CC--GTAACCCT-T-C--G-T-CTG
62 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTG
* ****** * * *
761158 ATCCAAT-CTTA-GACTGGGAATGA-AC--TCCGTATGCTTAGACTAGGAATGAACTCTGTATGC
127 ATCC--TGC-TACCACAACCCTTGATCCGGTCCG-AT-CTTAGACTGGGAATGAACTCCGTATGC
* ** * ** * *
761218 CTAAGTCAACCCATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGCGGCGGCCACTACGCCGG
187 CTAAGCCAACTGACGAAACAAGCGGGC-GG-GC-GAG-C-G---G-GC-G-GG-CACTACGCCGG
* *
761283 CTAGAGAGA-GAGGATGCGCAAGCCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
240 CCAGAGAGACG-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
* *
761347 ATATTTCTACT-TGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCGCTTAAGCCTT
304 ATATTTCTA-TGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTT
* *
761411 CACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTACGG
368 CACGTGAAGTTTCATGGCAAGACGACTCG---T-TA-TTTT--C----TAT-AAACTTTTTACGG
* * * * * *
761476 TTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAA-TTGTTAGATGTGATCCTTG
421 TTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTG
* * * *
761540 TATTTTTGTTGGCATGGACAAAAACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACAA
486 TATTTTTGTTGGCATGCA-AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCA
* *
761605 TTTGAAAACAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
550 TTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCA
*
761670 AATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
615 AATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCC
* ** *
761735 AAGTACCAGCACCCATCGCACATCATGCGCGCACA------------CCCTTATCGTCGGAACCC
680 AAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCGATCGCCGGAACCC
** ** * * ***
761788 CAATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGGAGAAAAATACAG
745 CAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGG
* * ** *
761853 CACCAGCATATGCCCGAGCCCAGCATGTGCTGCCGCAAACCTCATTCCT-ATCCGATCTTAGACT
810 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGGTCCGATCTTAGACT
761917 GGGAATGAACTCCGTATG
874 GGGAATGAACTCCGTATG
* * * * * * *
761935 CTTA-AATAGGGAATGAACTCCATATGCCTAACTCAACCGATGAAAAGAGCGTGCGGGCGCTCAA
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* ** ** * * ** *
761999 CTGGCCAGAGGGGCAAGATGCGCAAGCAAGGGATCGTCCGGGTCCCTCTCTGTATACTG-TCGAT
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GAT
* * ** * * * *
762063 CCTGCTGCCACAACCC-TCAGTTTGATCCAATCTTAGACTGGGTATGAACTCCATATGCCTAAGC
129 CCTGCTACCACAACCCTTGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
* * * *
762127 CAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCTGCCAGAGAGACGGGATGCG
193 CAACTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCG
* * *
762192 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTACGCACACCTTCATATTT-T-TGCATGCCAC
258 CAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATG--TGCCAA
* *
762255 TGGCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGAC
321 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * * ** *
762320 GAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTCTGTGGTTTG-GAATTTTTTAAAA
386 AAGACGACTCG---T-TA-TTTT--C---TAT--AAACTTTTTACGGTTCGAG-ATTTTTTAAAA
* * *
762384 TTTTTTCGAAAGGATTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
438 TTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGC
*
762449 AAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGTTTTTGTGACCATTTGAAAAAAAGTGTCC
503 -AAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCC
* * *
762514 TCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTC-AATGCTCTTTAAGGGT
566 CCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
*
762578 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCAT
631 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCAT
** *
762643 CGCACATCATGTGCGCACACCCCAACCGGCCCCCCCGATCGCCGGAACCCTAATGCCGTCGGTCA
696 CGCACATCATGTGCGCACACCCCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCA
** *
762708 GG---T-------T-CTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCTCCAGCACATGCCC
760 GGTTCTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCC
** * * ** *
762762 GAGCCCAAAATTTGCTACCGCAACCCTCGGTCCAGTCCGATCTTAGGCTGGGAATGAACTCCGTA
825 GAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTA
762827 TG
890 TG
* * * * * *
762829 CTTAGACTGGGAATGAACTCCGTATGCGTACGTCAACCTATGAAACGAGCGTGCAGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * ** * * *
762894 CGGGTAGA-GGGTGGGATGCGTTAGCCAGGGATCGACCGGGTCCCCCTCTGCGTGCTACCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
*** * * * * * *
762958 TGCTACTGTAACCCTTGGTCTGGTCTGATCTTAGATTGGGAATGGACTCCGTACGCCTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * ** * * * *
763023 CCGATGAAACGGGCGGGTGGGCGGGCGGGCGGGCACTACGCTGGCAAGAGAGACGGGATGCGCAA
196 CTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
763088 GCCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATTCCT
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCA
* *
763153 TTTTTATGGCTTGCAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* * * *
763218 GACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTT-TGGTTCGGGATTTTTTTTAAATTTTT
391 GACTCG---T-TA-TTTT--C----TAT-AAACTTTTTACGGTTCGAGA-TTTTTTAAAATTTTT
* * * *
763282 TCGGAAAGAGTTTTGGCCCCAAACTTGGTAGACGAGATCCTTGTATTTTTCTTGGCATGAACAAA
443 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAA
*
763347 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTT
507 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* *
763412 GAGACAC-----TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGA
572 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* **
763472 GTTCTCAAGGTTTGATGAGGGATAGGGGGATAATATAAGGGCCAAGTACCAGCACCCATCGCACA
637 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * **
763537 TCATGTGCGCACA-CCCCCCCGGCCCCCTCGATCGCCCGAACCCCAGTGCCACCGGTCAGGTTCT
702 TCATGTGCGCACACCCCCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* ** * *
763601 CCGGCGATGCTTTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCC
766 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* * * ** * *** *
763666 AGCATGCGCTGCCGCAA-CTTGGGTCCAGTCTGATCTTAGACTCAAAATGAACTCTGTATG
831 AGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * * * ** * *
763726 CTTAGAATTGCAATAAACTACGTATGCCTAAGTCAACCCACGAAACAAACGTGCTTGCACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
763791 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
* ** * *
763856 TACTACTGCAACCCTTGATCCGATCTGATCTTAGACTGGG-ATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * *** *
763920 CCGACGAAACAAGCAGGCGGGC-AGGCGAATGGGCACTACGCCGGCCAGGGAGACGGGATGCGCA
196 CTGACGAAACAAGCGGGCGGGCGA-GCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* *** *
763984 AGTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
*
764049 ATTTTTATGGCTTGTAAATTCATTCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
*
764114 CGACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TCGGGATTTTTTAAAATTTTT
390 CGACTCG---T-TA-TTTTC-T-A----T-AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* * * *
764178 TTGGAAGGGGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGGGAAAA
443 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCAT-GCAAAA
* * * *
764243 AACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACAATTTGAAAAACGTGTCCCCATTT
507 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
764308 CAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTC-TTAAGGGGGTGTGA
572 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* *
764372 GTTCTCGAGGTTTGATGAGAGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
637 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * *
764437 TCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGTCGGTCAAGTTTT
702 TCATGTGCGCACACCCCCCCCGG-CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* * * * * *
764501 GCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATATGGCACTAGCACATGCCCGAGCAC
766 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* * * * * *
764566 AGCATGTGCTGGCGCAACCCTCGATCCGATCTGATCTTAGACTGGAAATGAACTCCGTATG
831 AGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* *
764627 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
764692 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGACCGGGTCCCCCTCTACGTGCTG-TCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATC
* * * * * * **
764756 CTGCTACCACAACCCTTGGTCTGCTCTGATTTTAGACTGGAAATGAACTTTGTATGCCTAAGCCA
130 CTGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCA
* * *
764821 ACTGATG--A-AA-----CGAGCGAGCGGGTGGGCACTACGCCGGCCA-ATGAGACGGGATGCGC
195 ACTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGA-GAGACGGGATGCGC
*
764877 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTT-GG-GCA----C--A--TC----T-----T--
259 AAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGC
***
764921 CA----TATGGC-TGTAAATTCATACAATGGTCTGATAAGCCTTCACGTGAAGTTTCATGGCAAG
324 CATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAG
* * * *
764981 ACGACTCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGATTCGAGATTTTTTAAAATCTT
389 ACGACTCG---T-TA-TTTT--C---TAT--AAACTTTTTACGGTTCGAGATTTTTTAAAATTTT
* * * * *
765046 TTCAGAAGGATTTTTGGCCCCAAACTTGGTAGACATGGTCCTAGTATTTTT-TATGGCATGCACA
442 TTCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCA-A
* * * *
765110 AAAAAATTCATCTAAAAACTCAAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
505 AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCAT
* *
765175 TTCAAACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
570 TTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGT
** *
765240 GAGTTCTCGAGGTTTGATGAGGGATAGGCTGCCAATATAAGGGCCAAGTACTAGCACCCATCGCA
635 GAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCA
* * * * *
765305 CATCATGTGCGCACA-CCCCCCTGGCCCCCTCGATCGTCGGAACCCCAATGTCGCCAGTCAGGTT
700 CATCATGTGCGCACACCCCCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTT
* * * * * * *
765369 CTCCGGCGATGCTCCGACGATGGTGGCCCGACGAAAAAAAATGCGACACCAGCACATGCCTGATC
764 CTCCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGC
* * * * * *
765434 CCAGCATGTGCTGTCGCAACCCTCGCTCCGGTCAGATCTTAGATTAGGAATGAACTCCGTATG
829 CCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
765497 CTTAGACTAGGAATGAACTGCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGAGCGGTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * ** *
765562 CGGCCAGAGGGGCGGGATACGCAAGCAGGGGATCGATCGGGTCCCCCTTTATGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
***** *** * *
765627 TGCTGTTGTAACCCACAATCCGATCCGATCTTAGACTGGGAATGAATTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
* * * *
765692 CCGACG--A-AA-CGGGC--G-GA-----CGGGTACTACGTCGGCCAGAGAGACAGGATGCGCAA
196 CTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
* * *
765745 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGCGCTAATGCCA
261 GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCA
*
765810 TTTTTATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
326 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
*
765875 GACTTGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTT
391 GACTCG---T-TA-TTTTC-T-A---T--AAACTTTTTACGGTTCGA-GATTTTTTAAAATTTTT
* *
765939 TCGGAAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTGTTTTTGTTGGCATGCAAAAA
443 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAA
* *
766004 ATATTTCTA-CTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
508 A-AATTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* * *
766068 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGATCTTTAA-AGGATGTG
571 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTG
* *
766132 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATTGCAC
636 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * * * * *
766197 GTCATGTGCGCACACCGCACCCAGCCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCT
701 ATCATGTGCGCACACCCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
** * *
766262 -C--CG--G-T-----GATGGTGCCCCGGTGAAGAAAAATATGGCACCAACACATGCCCGAGCCC
766 CCGACGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCC
* * ** *
766316 AACATGTGCTGCCGTAACCCTCGGTCCAGT-CGATCTTAGACTGGGAATGAACTCTGTATG
831 AGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * * * *
766376 CTTAGACTGGGAATGAATTGCGTACGCCTAAGTCAACCCACGAAAAGAGCGTGCGAGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * **
766441 CGACCAGAAGGGCGGGATGTGCAAGCCGGGGATCGACTGAGTCCCCCTCTGCGTGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * * * * *
766506 TGCTGCCGCAACCCTCGGTTCGGT-CGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
** * *
766570 -TCGACGAAATGAGCGGGC--G-G-GCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATACGCA
196 CT-GACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCA
* * *
766630 AGCCGTGGATTGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATA-TT-T-TCTG-C-ATGCC
260 AGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
* * * *
766690 A-----AT-GC-----CATT-TTACAATGGTCCCTTAAGCCTTCTCGCGAAGTTTCATGGCAAGA
325 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * *
766743 CGACTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTT
390 CGACTCG--TT--A-TTTTC-T-A----T-AAACTTTTTACGGTTCGAGATTTTTTAAAATTTTT
* ** *
766808 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGAAATACACAAA
443 TCGGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA-AAA
* * *
766873 AATATTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCCCATTT
507 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
* * *
766938 CAGACACTTTAATGGCCACTGGCAGCAAACCTATAAATTCTCAAATGCTCTTTAAGGGGGTGTGA
572 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGA
* * * * *
767003 GTTCTTGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCCATTACCAGCACCCATCGTACA
637 GTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* * * * *
767068 TCATGGGCGCACA-CCCCCTCGGCCCCCTCGACCGCCGGAACCCCAATGCCGCCTGTCAGGTTCT
702 TCATGTGCGCACACCCCCCCCGGCCCCC-CGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCT
* ** * *
767132 CC-AGCGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATACGGCTCCAGCACATACCCGAGCC
766 CCGA-CGATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCC
* * * * ** * *
767196 TAGCAAGTGCTGCCTCAACCCTGGGTCTAATCCAATCTTAGACTGGGAATGAACTCTGTATG
830 CAGCATGTGCTGCCGCAACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
* * * *
767258 CTTAGATTGGGAATCAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * *
767323 CGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCTGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
* * * * * * * * *
767388 TGCTGCCACAACCCTTGGTTCAGTCCGGTCTTAGACTAGGAATGAACTCCATATTCTTAAGCCAA
131 TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
767453 C
196 C
767454 CGACAAAATG
Statistics
Matches: 10176, Mismatches: 1892, Indels: 1521
0.75 0.14 0.11
Matches are distributed among these distances:
866 106 0.01
867 31 0.00
868 98 0.01
869 450 0.04
870 522 0.05
871 3 0.00
872 24 0.00
873 23 0.00
874 87 0.01
875 41 0.00
876 57 0.01
877 210 0.02
878 326 0.03
879 163 0.02
880 84 0.01
881 73 0.01
882 207 0.02
883 40 0.00
884 8 0.00
885 7 0.00
886 319 0.03
887 214 0.02
888 113 0.01
889 315 0.03
890 814 0.08
891 494 0.05
892 571 0.06
893 555 0.05
894 501 0.05
895 68 0.01
896 142 0.01
897 327 0.03
898 150 0.01
899 12 0.00
900 207 0.02
901 726 0.07
902 213 0.02
903 54 0.01
904 3 0.00
905 33 0.00
906 102 0.01
907 343 0.03
908 9 0.00
909 3 0.00
911 4 0.00
912 2 0.00
913 12 0.00
914 5 0.00
915 2 0.00
916 2 0.00
917 9 0.00
918 8 0.00
919 5 0.00
920 4 0.00
921 1 0.00
922 13 0.00
923 25 0.00
924 26 0.00
925 20 0.00
926 23 0.00
927 18 0.00
928 35 0.00
929 60 0.01
930 56 0.01
931 21 0.00
932 18 0.00
933 2 0.00
934 3 0.00
935 6 0.00
936 10 0.00
937 10 0.00
938 19 0.00
939 43 0.00
940 17 0.00
941 17 0.00
942 11 0.00
943 10 0.00
944 23 0.00
945 25 0.00
946 28 0.00
947 21 0.00
948 26 0.00
949 11 0.00
950 9 0.00
951 2 0.00
952 4 0.00
953 5 0.00
954 13 0.00
955 4 0.00
956 1 0.00
957 2 0.00
958 11 0.00
959 10 0.00
960 4 0.00
961 3 0.00
962 11 0.00
963 14 0.00
964 5 0.00
965 9 0.00
967 3 0.00
968 4 0.00
969 3 0.00
970 7 0.00
971 6 0.00
972 2 0.00
973 9 0.00
974 10 0.00
975 7 0.00
976 1 0.00
977 3 0.00
978 11 0.00
979 15 0.00
980 15 0.00
981 16 0.00
982 12 0.00
983 9 0.00
984 7 0.00
985 5 0.00
986 15 0.00
987 24 0.00
988 24 0.00
989 3 0.00
990 8 0.00
991 2 0.00
992 15 0.00
993 11 0.00
994 4 0.00
995 10 0.00
996 13 0.00
997 17 0.00
998 8 0.00
999 5 0.00
1000 8 0.00
1001 4 0.00
1002 1 0.00
1003 1 0.00
1006 1 0.00
1009 9 0.00
1010 40 0.00
1011 2 0.00
1014 3 0.00
1015 4 0.00
1016 1 0.00
1017 2 0.00
1018 3 0.00
1019 3 0.00
1022 183 0.02
1023 1 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.25
Consensus pattern (891 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCC
TGCTACCACAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAA
CTGACGAAACAAGCGGGCGGGCGAGCGGGCGGGCACTACGCCGGCCAGAGAGACGGGATGCGCAA
GCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCCA
TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
GACTCGTTATTTTCTATAAACTTTTTACGGTTCGAGATTTTTTAAAATTTTTTCGGAAGGAGTTT
TGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAATTCAGCTAAA
AACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATG
GCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTG
ATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACAC
CCCCCCCGGCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTTCTCCGACGATGCTCCGA
CGATGGTGCCCCGACGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGC
AACCCTCGGTCTGGTCCGATCTTAGACTGGGAATGAACTCCGTATG
Found at i:758203 original size:26 final size:26
Alignment explanation
Indices: 758165--758215 Score: 84
Period size: 26 Copynumber: 2.0 Consensus size: 26
758155 CTGGTCTGAT
*
758165 CTTAGTCTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
758191 CTTAGACTTGGAATGAACTCCATAT
1 CTTAGACTGGGAATGAACTCCATAT
758216 CCCTATGTCA
Statistics
Matches: 23, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.29, C:0.20, G:0.20, T:0.31
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:758818 original size:901 final size:896
Alignment explanation
Indices: 755502--767472 Score: 7311
Period size: 901 Copynumber: 13.2 Consensus size: 896
755492 CCGGTTCGAT
* * * * *
755502 CTTAGACT-GGAATGAACTCCGTATGCCTAAGTCATCCCACTAAATGAGCGTACGGGTGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** * * * * * **
755566 CGACAAAAGGGGTAGGATGCACAA-CCGAGGATCG-GCCGGTCTCCCTCTGCGTGCTACCTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTC-GATC
* * * ** * * * *
755629 CTTGCTGTCCACAACCCCTCCGATTCTAGTCTGAATCTTTAGACTGCGAAATGAACTCCGTAAGC
130 C-TGCT-ACCGCAA-CCCT-TGA-TCCGGTCCG-ATC-TTAGACTG-GGAATGAACTCTGTATGC
* *
755694 CTAAGCCAACTGACCGAAAATGAGCGGGC--G-GGACGGGCACTACACCGGCTC-GAGAGACGGG
187 CTAAGCCAACTGA-CG-AAACGAGCGGGCGGGCGGGCGGGCACTACACCGGC-CAGAGAGACGGG
* *
755755 ATGCGCAAGCCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGTGTG
249 ATGCGCAAG-CCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTG
755820 CC-ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG-CTTCACGTGATAGTTTC
313 CCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGA-AGTTTC
* *
755883 ATGGCAAAGAC-AGCTCGTTTCATATTTTCATGATTTT-GAAACTTTTTTACGGTTCGA-ATTTG
377 ATGGC-AAGACGA-CCCGTTTCAT-TTTTCATGATTTTCAAAAC-TTTTTACGGTTCGAGATTT-
* * * * *
755945 TTTAAA-TTTTTCGGAAGCATTTTTTTGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTCTT
437 TTTAAATTTTTTTGGAAGTA-TTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTT
* * *
756009 GGCATGCACAAAACAATTCAGCTAAAATCTCGAAGTGTACAAGATTTTGTGACCATCTGAAAAAA
501 GGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAA
*
756074 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTCAAATGCTCTTT
566 GTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTT
* * * * *
756139 AAGAGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGAGGGCCAATCTAAGGGCCAAGTGCCAGC
631 AAG-GGGTGTGAGTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGC
* * * * *
756204 ACCCATCGCACATCATGTGCGCACA-CCCCCCCGGCCCACCCGATTGTCGAAACCCCAATGTCGT
695 ACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGT
* * * * *
756268 CGGTC--A-----G--G-TTCTCCGACGATGGTGCCCCGACGAAGAAAACTGTAGCCCCAGCACA
760 CGGTCAGATTCTCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACA
* * ** *
756323 TGCCCGAGCCCAGCATCTACTTTCGCAACCCTCA-GTTTGGTCTGATCTTAGACTGGGAATGAAC
825 TGCCCGAGCCCAGCATGTGCTGCCGCAACCCT-AGGTCTGGTCTGATCTTAGACTGGGAATGAAC
756387 TCC-TATG
889 TCCATATG
** * * * *
756394 CTTAGACTACGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACAAGCGTGCGGGCACTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
756459 CAGACAGAGGGGCGGGATGCGCAAGCCGAGGATAGATCGGGTCCCCCTCTACGTGCTGCCGATCA
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCC
* * * **
756524 TGCTACCGCAACCCTTGGTCAGGTCTGATCTTAGACTGGGAATGAACTCCATATGCCTAAGCCAA
131 TGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
* * * * ** **
756589 CCGACGAAATGAGGGGGCGGGCGGGCGCGTGGGCATTACGTCGGCCAGAGAGATAGGATGCGCAA
196 CTGACGAAACGAGCGGGCGGGC-GG-GC--GGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
* *
756654 GTCGTGGATCGATAGGGTGGTAGGTGAGTTTACGCACATCTTCATATTTCTGTGTGCCAATGCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
* *
756719 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAACCTTCACATGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* **
756784 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGGTTCGAGATTTTTTTAAATTTTTT
387 GACCCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGA-TTTTTTAAATTTTTT
* * * *
756849 TGGAAATCCTTTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTGTTTTTGTTGGCATGCACAA
449 TGGAAGT--ATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAA
*
756914 AAAAATTTAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
512 AAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATT
* *
756979 TCAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAACGCTCTTTAAGGGGGTGTG
577 TCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTG
* * * *
757044 AGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCAAAGTACCAGCTCCCATCGCAC
641 AGTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCAC
* * ** * *
757109 ATCATGTGCGCACACCTCCCCCGGCCCCCCCGATCGTCGGAACCCCAATTTCGTTGGTCAGGTTC
706 ATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTC
* * * *
757174 TCCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATATGGCACCAGCACATGCTCGAGCC
771 T-CGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCC
* * * *
757239 CAGCATGTGCTGCCGTAACCCTCGGTCTGGTCTGATCTTAGACAGGGAATGAACTCCGTATG
835 CAGCATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * * * *
757301 CCTACACTGGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAATGAGCGTGCGGGCGTTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * ** * **
757366 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATCGGCCCGGTCCAACTCTACGTGCTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTC-GATC
* * * * ** *
757430 CTGCTACCACAACCATTGATCCGGTCCAATCTTAGACAGCAAATGAACTCTGTATACCTAAGCCA
130 CTGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
* * * * * *
757495 ACTGACAAAACAAGCGGGCGGGCGAGCGGGCGGGCACTGCGCCGGCTAGAGAGATGGGATGCGCA
195 ACTGACGAAACGAGCGGGC--G-G-GCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCA
* * *
757560 AGCCGTGGATCGATAGGCTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATGCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCC
*
757625 ATTTTTATGGCTTGTAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
*
757690 CGACCCG------------T-ATTTTCAAAACTTTTTGCGGTTCGAGATTTTTTAATATTTTTTT
386 CGACCCGTTTCATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAA-ATTTTTTT
* *
757742 GGAAGGATTTTTGGCCCCAAACTTGGTAGATGTAATCCTTGTATTTTTGTTGGCATGCA-AAAAA
450 GGAAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAAAAA
757806 GAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
515 -AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTC
*
757871 AGACACTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGT
579 AGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGT
*
757936 ACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATAGCACATC
644 ACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* * * *
758001 ATGTGCACTCACCCCCTCCCGGCCCCTCCGATCGCCGGAACCCCATTGCCGTCGGTCAGATTCTC
709 ATGTGCGCACACCCCC-CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTCT-
*
758066 CGACGATGCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCA
772 CGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCA
* *
758131 GCATGTGCTACCGCAACCCTAGGTCTGGTCTGATCTTAGTCTGGGAATGAACTCCATATG
837 GCATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * * *
758191 CTTAGACTTGGAATGAACTCCATATCCCTATGTCAACCCATGAAACGAGCGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
758256 CGGCCAGATGGGTGGGATGCACAAGCTGAGGATCGA-CTGTGTCCCCCTCTATGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATC-GGGTCCCCCTCTACGTGCTGTCGATC
* * * * * **
758320 CTACTATCGCAACCCTTGATCCGATCCGATCTTATATTGGGAATGAACTCTGTATGCCTAAGAAA
130 CTGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
* *
758385 ACTGACGAAACGAGCGGACGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGTGCAAGCC
195 ACTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCC
* **
758450 GTTGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTT
260 GTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTT
758515 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* * *
758580 CCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGGGATTTTTTAATATTTTTTTGG
390 CCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAA-ATTTTTTTGG
* *
758645 AAGTAATTTTAGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCA-AAACAAA
452 AAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAAA-AAA
758709 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
516 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * *
758774 ACGCTTTAATGGCTATTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTACGGGGGTGTGAGTA
581 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTA-AGGGGTGTGAGTA
758839 CTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
645 CTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * ** * *
758904 TGTACGCTCACCCCCTCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCACCAGTCAGGTTCTCG
710 TGTGCGCACACCCCC-CCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTCTCG
** * * * *
758969 GTGATGCTCCGACGATGGTTCCCCGGTGAAGAAAAATGTGGCTCCAGCACATGCTCGTGCCCAGC
774 ACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCAGC
* * * **
759034 ATGTGCTGTCACAACCCTCGGTCTGGTCTGATCTTAGTTTGGGAATGAACT-CAGTATG
839 ATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCA-TATG
* * * * *
759092 CTTAGACTGGGAATGAACTCCGTATGCCTAAATCAACCCGCGAAATGACCGTGCAGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* **
759157 CGGCCAGAGGGGCGGGATGCGCAAGCCG-GGAATTGATCGGGTCCCCCTCTGTGTGCTGTCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGG-ATCGATCGGGTCCCCCTCTACGTGCTGTCGATC
** * * ** * *
759221 CTGCTACTACAACCC-TCAGTCCGTTCTAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCC
130 CTGCTACCGCAACCCTTGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCC
* * * * *
759285 AACAAATGCCCGATCGTCGGAACCCCAATGCCGTTGGTCAGGTAATCCGATGAAGAAAAATGCAG
194 AAC---T----GA----C-GAA--ACGA-G-CG--GG-C-GG----GCG--G--G-----CG-GG
* ** * * * * * * **
759350 CACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CCCTCGG-TCCGAT---CT-G-ATCT
225 CACTA-CACCGGCCAGAG---AG-ACGGGATG-CGCAAGCCGT-GGAT-CGATAGGGTGGTAGGT
* * * * * * ** ** * *** * * * **
759408 TAGATTGGGAATGAACTTCATATGCTTAGGT-TGGGAATG-AAGTCCGTATGCCTAAGTCAACCC
282 GAGTTTAGGCA-CATCTTCATAT--TTCTGTGTGCCAATGCCA-TTTTTATGGCT-TGTAAATTC
* * * *** *
759471 ACGA-AATGAG--CGTGTAGGCGC-TCA-GATGGCTAGAGGGGCGGGATGCGCAAGCCGGGGATC
342 A-TACAATG-GTCCCT-TAAGC-CTTCACG-T-G--A-AGTTTC---ATG-GCAAGAC---GA-C
* ** **** ** * * * * * *** * ** *
759531 GATCGGGTC-CCCCTC-T-ACGTGC--CACTGATCTTGCTGTT-GCA-A--CCCTCAATTTGGTC
390 --CCGTTTCATTTTTCATGATTTTCAAAACT--TTTTACGGTTCG-AGATTTTTTAAATTTTTTT
* * * * ***** ** * * * ***** ** *
759587 CG-A-TCTTAGATAGGGAATGAACTCCGTATG-CCTAAGTCAATCGATGAAACAAGCGGGCAGGC
450 GGAAGTATT--TTTGGCCCCAAACTTGGTA-GACGTAA-TC-CTTG-T-ATTTTTGTTGGCATGC
**** ** *** * * * * ** * * * * * * *****
759649 GGGCACTACGCCGGCTAGAGAGAC-GGGA-TGCGCAAGCTGTGGATCGACAAGGTGGTAGGTGGG
508 ACAAAAAAATTCAGCTA-A-AAACTCGAAGTGTACAAGATTTTG-T-GACCA-TTTG-AAAAAAG
* * * * * * * * * ** * *
759712 TTTAGGCACATCCTC--ATATTTCTACAT-GCCAATGCCA-CTTTTATGGCTTGTAAATTCAT-A
567 TGT--CCCCAT-TTCAGACACTT-TA-ATGGCTACTGGCAGC----A-AACCTGTAAAATC-TCA
* *** * * *
759772 CAATGGTCTCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCAGACACTTTAAT
621 -AATGCTCT-TTAAGGGGT---GTG-AG-TAC-T--C--GA--A---G-TTT--G--A---TGAG
* ** * *** * * * ******
759837 GGCTACTGGTAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGATAGGGGGC-CAAT-ATAAG
661 GGATA--GGGGGCCAA--TATAAGGGC-CAAGTAC-C----A-GCACCCATCGCAC-ATCAT--G
* * * * *** * * * * *
759900 GGCCATGTACTAGCACCCATTGCACATCATATGCACAC-ACCCCCCGG-GCCCCTGATCGTCAGA
712 TG-C--GCAC-ACCCCCCCCGGC-C--C-----C-CCCGA-TCGCCGGAACCCC--A--AT--G-
* * * ** ** *
759963 ACCTCAATGCCACCGGTCAGGTTCCCCGGTGATGCTCCGGTGATGGTGCCCCGACGAAGAAAAAT
756 --C-C---G---TCGGTCAGATT-CTCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAAT
* * * ** * * *
760028 GTGGCACCAGCACATGCCCGAGCCCTGCATGTGCTACCATAACCCTCGGTCCGGTCCGATCTTAG
811 GTGGCTCCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAG
* *
760093 ACTGGGAATGAACTTCGTATG
876 ACTGGGAATGAACTCCATATG
* *** *
760114 CTTAGACTGGGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTATTGGCACTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* ** * * *
760179 CGACCAGAGGGGCATGATACGCAAGCTGGGGATCGATCGGGT---CC-CT-C-T-CTG-CG----
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCC
*
760232 TGCTACCGCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAACTCT-TATGCTTAGACTGG
131 TGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGC-----CT--
* * * *** * *
760296 GAATGAACTCCATA-TGCCTAAGTCAACCCA-CGAAATGAGCGTGCGGGCACT-CAACCGGCCAG
189 -AA-G----CCA-ACTG---ACG--AAACGAGCG-GGCGGGCGGGCGGGCACTAC-ACCGGCCAG
* * * * * * * * * *
760358 AGGGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGCATGCTGCCGATCCTGCT-GT
240 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGG------T-GGTA-GGTG-AG-T--T--TAG-
* * *** ** * ** * * *
760422 CGCAACCCTCGGTCCGGTTCGATCT-TAGACTGGGAATG-AACTTCGTATGCCTAAGCTAACTGA
290 -GC-A-CATC-TTCATATT---TCTGT-G--TGCCAATGCCA-TTTTTATGGCT-TG-TAAAT--
* * **** * *** * ** *** * *
760485 TGAAACGAAATGGGTGGGCGGGCAGGCGGGCAC-T-ACG---CCCGGCCAGAGA-GATGGGATGC
340 TCATAC--AAT-GGT---CCCTTAAGCCTTCACGTGAAGTTTCATGG-CA-AGACGACCCGTTTC
***** * * * * * ** ** * * * * ** *
760544 GCAAGTCGTG-TATTGATAGA-GTGGTA-GGTGGGTTTAGGCACATCTTCATATTTCTACGTGCC
397 ATTTTTCATGATTTTCA-AAACTTTTTACGGT---TCGA-G-A-TTTTTTAAATTT-T-TTTG-G
*** ** * * * * *** *
760606 AATGTCATTTTTATGGCTTGTAAATTCATACAATGGT-CCCTTAAGCCTT-CACGTGAAGTT-TC
452 AA-GT-A-TTTT-TGGC-CCCAAA--C-T----TGGTAGACGTAATCCTTGTA-TTTTTGTTGGC
*** *** **** * * * * **
760668 ATG-ACAAGACGACTCTTTTTCT-ATTTTTC-ACGATTTTCAAAACTTTTTGGGGTTTG-GGATT
504 ATGCACAA-A--AAAATTCAGCTAAAAACTCGAAG-TGTACAAGA--TTTT---G--TGACCATT
*** * ** * * * * *
760729 TTTTAAAA-T-T----TTTTTGGA-AGGCTTT-TTGGCCCAAAACTTGGTAGACCTGATACTTGT
558 TGAAAAAAGTGTCCCCATTTCAGACA--CTTTAATGG--C--TAC-TGGCAG--C--AAACCTGT
*** ** * ** **** * ** * * * * ** * *
760786 ATGTTTCTTCGCATGC-ATAAAAAAATTCAGCTAAAAACTCGAACTAT-A-CA-AGATTTTGTGA
612 A-AAATC-TCAAATGCTCTTTAAGGGGT--G-TGAGTACTCGAAGTTTGATGAGGGA-TAGGGGG
* ** * * * *** ** **
760847 CC-ATTTGAA---AAAAGT----GTC-CCCATTTCAGACACTTTAATG-GC-TAC-TGGCAGCAA
671 CCAATAT-AAGGGCCAAGTACCAG-CACCCA--TC-G-CAC-ATCATGTGCGCACACCCCCCCCG
* ****** * * * * * * * * *
760900 ACCTGTAAAATC-TC-AAATGCTCCTTAAGTG-GGT--GTGAG-TTCTCGAGGTTTGAT--GAGG
729 GCCCCCCCGATCGCCGGAA--C-CC-CAA-TGCCGTCGGTCAGATTCTCGACG-ATGCTCCGA-C
** * * * * * * * *
760957 GATAGG-GGGCC----AA-TATAA-G-GGC-CAAGTACCA-GCACCCATCACA-CATCATGC-G-
787 GAT-GGTGCCCCGATGAAGAAAAATGTGGCTCCAGCA-CATGC-CCGAGCCCAGCAT-GTGCTGC
** * ** * * *** * * *
761009 CGCACACCCCCCCGATC--CCCCGATCTTCGAAAC-CCCAATG-CCGCCGGTCA-G
848 CGCA-A--CCCTAGGTCTGGTCTGATCTT--AGACTGGGAATGAACTCC-AT-ATG
* ** * * * * *** *
761060 GTT---CTCCG-ATGACGCTCCG-ATG-AT-GGTGC--CCC-GGCAAA-GAAAAATAC--G-G--
1 CTTAGACTGGGAATGA-ACTCCGTATGCCTAAGT-CAACCCACG-AAACG-AGCGTGCGGGCGCT
** * * ** * * * **
761109 CA-CC-ATCACA--TGCCCGA-GC-CCAG-C-ATG-T-GAT-GCCGTAACCCT-T-CGT-CTGAT
62 CAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCG-GGTCCCCCTCTACGTGCTG-T
* * * * * *
761160 CCAATCTTAG--ACTGGGAA----TGA-AC--TCCGTATGCTTAGACTAGGAATGAACTCTGTAT
125 -CGATCCT-GCTAC-CGCAACCCTTGATCCGGTCCG-AT-CTTAGACTGGGAATGAACTCTGTAT
* ** * * * *
761216 GCCTAAGTCAACCCATGAAATGAGCGTGCGGGTGCTCAGCCGGCCAGAGCGGCGGCCACTACGCC
185 GCCTAAGCCAACTGACG-AA--A-CGAGC-GG-G--C-G--GG-C---G-GGCGGGCACTACACC
* * *
761281 GGCTAGAGAGA-GAGGATGCGCAAGCCGTGCATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
234 GGCCAGAGAGACG-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCT
* * *
761345 TCATATTTCTACT-TGCCAATACCATTTTTATGGCTTGTAAATTCATACAATGGTCGCTTAAGCC
298 TCATATTTCT-GTGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* * * **
761409 TTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
362 TTCACGTGAAGTTTCATGGCAAGACGACCCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTAC
* * * * * * * *
761474 GGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAA-TTGTTAGATGTGATCCT
425 GGTTCGAGATTTTTT-AAATTTTTTTGGAAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCT
* * *
761538 TGTATTTTTGTTGGCATGGACAAAAACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGAC
489 TGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGAC
* * *
761603 AATTTGAAAACAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
554 CATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCT
* * *
761668 CAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGG
619 CAAATGCTCTTTAA-GGGGTGTGAGTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGG
* ** *
761733 CCAAGTACCAGCACCCATCGCACATCATGCGCGCACA-------------CCCTTATCGTCGGAA
683 CCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAA
** * ** * * * *
761785 CCCCAATGCCACCGGTCAGGTTCTCCGGTGATGCTCCGGCGATGGTGCCCCGACGGAGAAAAATA
748 CCCCAATGCCGTCGGTCAGATTCT-CGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATG
** * * * * * *
761850 CAGCACCAGCATATGCCCGAGCCCAGCATGTGCTGCCGCAAACCTCA-TTCCT-ATCCGATCTTA
812 TGGCTCCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCT-AGGT-CTGGTCTGATCTTA
*
761913 GACTGGGAATGAACTCCGTATG
875 GACTGGGAATGAACTCCATATG
* * * * * * *
761935 CTTA-AATAGGGAATGAACTCCATATGCCTAACTCAACCGATGAAAAGAGCGTGCGGGCGCTCAA
1 CTTAGACT-GGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAG
* ** * * *** *
761999 CTGGCCAGAGGGGCAAGATGCGCAAG-CAAGGGATCG-TCCGGGTCCCTCTCTGTATACTGTCGA
65 CCGGCCAGAGGGGCGGGATGCGCAAGCCGA-GGATCGAT-CGGGTCCCCCTCTACGTGCTGTCGA
* * * ** * * * **
762062 TCCTGCTGCCACAACCC-TCAGTTTGATCCAATCTTAGACTGGGTATGAACTCCATATGCCTAAG
128 TCCTGCTACCGCAACCCTTGA-TCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAG
* * *
762126 CCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCGGGCACTACGCCTGCCAGAGAGACGGGATGC
192 CCAACTGACGAAACGA----GCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGC
* * * * ** *
762191 GCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTACGCACACCTTCATATTTTTGCATGCCACT
253 GCAAGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAAT
* * *
762256 GGCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGACG
318 GCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCA
* * * ** *
762321 AGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTCTGTGGTTTG-GAATTTTTTAAAAT
383 AGACGACCCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAG-ATTTTTT-AAAT
* * * * *
762385 TTTTTCGAAAGGATTTTTGGTCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCA
444 TTTTTTGGAAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCA
* * *
762450 AAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGTTTTTGTGACCATTTGAAAAAAAGTGTCCT
509 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTG-AAAAAAGTGTCCC
*
762515 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTATAAAATCTC-AATGCTCTTTAAGGGTG
573 CATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGG-G
* * *
762579 TGTGAGTTCTCGAGGTTTGATGAGGGATAGGGAGCCAATATAAGGGCCAAGTACCAGCACCCATC
637 TGTGAGTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATC
** *
762644 GCACATCATGTGCGCACACCCCAACCGGCCCCCCCGATCGCCGGAACCCTAATGCCGTCGGTC--
702 GCACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAG
* *
762707 A-----G--G-TTCTCCGACGATGGTGCCCCGGTGAAGAAAAATGTGGCTCCAGCACATGCCCGA
767 ATTCTCGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGA
** * * * ** * * *
762764 GCCCAAAATTTGCTACCGCAACCCTCGGTCCAGTCCGATCTTAGGCTGGGAATGAACTCCGTATG
832 GCCCAGCATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * * * *
762829 CTTAGACTGGGAATGAACTCCGTATGCGTACGTCAACCTATGAAACGAGCGTGCAGGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
** * ** * * **
762894 CGGGTAGA-GGGTGGGATGCGTTAGCC-AGGGATCGACCGGGTCCCCCTCTGCGTGCTACCGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGA-GGATCGATCGGGTCCCCCTCTACGTGCTGTCGATC
* * * * * * * * *
762957 CTGCTACTGTAACCCTTGGTCTGGTCTGATCTTAGATTGGGAATGGACTCCGTACGCCTAAGCCA
130 CTGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
* * * * * *
763022 ACCGATGAAACGGGCGGGTGGGCGGGCGGGCGGGCACTACGCTGGCAAGAGAGACGGGATGCGCA
195 ACTGACGAAACGAGC----GGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCA
* * * *
763087 AGCCGTAGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTATGTGCCAATTCC
256 AGCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCC
* * *
763152 TTTTTTATGGCTTGCAAATTCATACCATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
321 ATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGA
* * * * *
763217 CGACTCGTTTTCTATTTTTCACGATTTTTAAAACTTTTT-TGGTTCGGGATTTTTTTTAAATTTT
386 CGACCCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGA--TTTTTTAAATTTT
* * * *
763281 TTCGGAAAG-AGTTTTGGCCCCAAACTTGGTAGACG-AGATCCTTGTATTTTTCTTGGCATGAAC
447 TTTGG-AAGTATTTTTGGCCCCAAACTTGGTAGACGTA-ATCCTTGTATTTTTGTTGGCATGCAC
*
763344 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCA
510 AAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCA
* *
763409 TTTGAGACAC-----TGGCTACTGGCAGCAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTG
575 TTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTG
* **
763469 TGAGTTCTC-AAGGTTTGATGAGGGATAGGGGGATAATATAAGGGCCAAGTACCAGCACCCATCG
639 TGAGTACTCGAA-GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * * ** *
763533 CACATCATGTGCGCACA-CCCCCCCGGCCCCCTCGATCGCCCGAACCCCAGTGCCACCGGTCAGG
703 CACATCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGA
* ** * * * *
763597 TTCTCCGGCGATGCTTTGGCGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACATGCCCGA
768 TTCT-CGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGA
* * * ** *** **
763662 GCCCAGCATGCGCTGCCGCAA-CTTGGGTCCAGTCTGATCTTAGACTCAAAATGAACTCTGTATG
832 GCCCAGCATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * * * * * ** * *
763726 CTTAGAATTGCAATAAACTACGTATGCCTAAGTCAACCCACGAAACAAACGTGCTTGCACTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * *
763791 CGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCC
* * * * *
763856 TACTACTGCAACCCTTGATCCGATCTGATCTTAGACTGGG-ATGAACTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
* * * * * *
763920 CCGACGAAACAAGCAGGCGGGCAGGCGAATGGGCACTACGCCGGCCAGGGAGACGGGATGCGCAA
196 CTGACGAAACGAGCGGGCGGGC-GG-G--CGGGCACTACACCGGCCAGAGAGACGGGATGCGCAA
* * ** *
763985 GTCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCA
257 GCCGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCA
*
764050 TTTTTATGGCTTGTAAATTCATTCAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
322 TTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGAC
* ** *
764115 GACTCGTTTTCTATTTTTCATGATTTTTGAAACTTTTTACGG-TCGGGATTTTTTAAAATTTTTT
387 GACCCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTT-AAATTTTTT
*** * * *
764179 TGGAAGGGGTTTTGCCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTGTTGGCATGGGA-AAA
449 TGGAAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCAT-GCACAAA
* * * *
764243 AACATTCAGCTAAAAACTCAAAGTGTACAAGATTTTGTGACAATTTGAAAAACGTGTCCCCATTT
513 AAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTT
*
764308 CAGACACTTTAATGGCTACTAGCAGCAAACCTGTAAAATCTCAAATGCTC-TTAAGGGGGTGTGA
578 CAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGA
* * * *
764372 GTTCTCGAGGTTTGATGAGAGACAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
642 GTACTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACA
* *
764437 TCATGTGCGCACA-CCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGTCGTCGGTCA-AGTTT
707 TCATGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGA-TTC
* * * * *
764500 TGCGACGATGCTCCGGCGATGGTGCCCCGATGAAGAAAAATATGGCACTAGCACATGCCCGAGCA
771 T-CGACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCC
* * * * * * *
764565 CAGCATGTGCTGGCGCAACCCTCGATCCGATCTGATCTTAGACTGGAAATGAACTCCGTATG
835 CAGCATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* *
764627 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * *
764692 CGGCCAGAGGGGCAGGATGCGCAAGCCGGGGATTGACCGGGTCCCCCTCTACGTGCTGTCAATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCC
* * * * * * * *
764757 TGCTACCACAACCCTTGGTCTGCTCTGATTTTAGACTGGAAATGAACTTTGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
* * * *
764822 CTGATGAAACGA----GCGAGCGGGTGGGCACTACGCCGGCCA-ATGAGACGGGATGCGCAAGCC
196 CTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACACCGGCCAGA-GAGACGGGATGCGCAAGCC
* *
764882 GTGGATCGATAGGGTGGTAGGTGGGTTT-GG-GCA----C--A--TC----T-----T--CA---
260 GTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTT
***
764923 -TATGGC-TGTAAATTCATACAATGGTCTGATAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
325 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * * **
764986 TCGTTTTCTATTTTTCACAATTTTCAAAACTTTTTGCGATTCGAGATTTTTTAAAATCTTTTCAG
390 CCG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTT-AAATTTTTTTGG
* * ** *
765051 AAGGATTTTTGGCCCCAAACTTGGTAGACATGGTCCTAGTATTTTT-TATGGCATGCACAAAAAA
452 AAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGT-TGGCATGCACAAAAAA
* * * * *
765115 ATTCATCTAAAAACTCAAAGTGTATAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAA
516 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* *
765180 ACACTTTAATGGCTACTGGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
581 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTA
* ** *
765245 CTCGAGGTTTGATGAGGGATAGGCTGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCA
645 CTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * *
765310 TGTGCGCACA-CCCCCCTGGCCCCCTCGATCGTCGGAACCCCAATGTCGCCAGTCAGGTTCTCCG
710 TGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTCT-CG
* * * * * * * * *
765374 GCGATGCTCCGACGATGGTGGCCCGACGAAAAAAAATGCGACACCAGCACATGCCTGATCCCAGC
774 ACGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCAGC
* * * * * * * *
765439 ATGTGCTGTCGCAACCCTCGCTCCGGTCAGATCTTAGATTAGGAATGAACTCCGTATG
839 ATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * * * *
765497 CTTAGACTAGGAATGAACTGCGTATGCCTAAGTCAACCCACAAAACGAGCGTGCGAGCGGTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * *
765562 CGGCCAGAGGGGCGGGATACGCAAGCAGGGGATCGATCGGGTCCCCCTTTATGTGCTGCCGATCC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCC
*** * *** * * *
765627 TGCTGTTGTAACCCACAATCCGATCCGATCTTAGACTGGGAATGAATTCCGTATGCCTAAGCCAA
131 TGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
* * * ** *
765692 CCGACG-AA--A-----CGGGCGGACGGGTACTACGTCGGCCAGAGAGACAGGATGCGCAAGCCG
196 CTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
* * *
765749 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGCGCTAATGCCATTTT
261 TGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
* *
765814 TATGGCTTGTAAATTCATACAATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
326 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACC
* *
765879 TGTTTTCTATTTTTCATGATTTTCAAAACTTTTTACGGTTC-AGGATTTTTTAAAATTTTTTCGG
391 CG-TTTC-ATTTTTCATGATTTTCAAAACTTTTTACGGTTCGA-GATTTTTT-AAATTTTTTTGG
* * * * *
765943 AAGGAGTTTTGGCCCCAAACTTGGCAGACGTGATCCTTGTGTTTTTGTTGGCATGCA-AAAAATA
452 AAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAAAAA-A
* *
766007 TTTCTA-CTAAAAACTCAAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
516 ATTC-AGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* * * *
766071 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGATCTTTAAAGGATGTGAGTT
580 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTA
* * * *
766136 CTCGAGGTTTGATGAGGGATAGGGGGCCAACATAAGGGCCAAGTACCAGCACCCATTGCACGTCA
645 CTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * *
766201 TGTGCGCACACCGCACCCAG-CCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTC--
710 TGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTCTCGA
* * * * *
766263 CG--G-T-----GATGGTGCCCCGGTGAAGAAAAATATGGCACCAACACATGCCCGAGCCCAACA
775 CGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCAGCA
* * ** **
766320 TGTGCTGCCGTAACCCTCGGTCCAGTC-GATCTTAGACTGGGAATGAACTCTGTATG
840 TGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * * * *
766376 CTTAGACTGGGAATGAATTGCGTACGCCTAAGTCAACCCACGAAAAGAGCGTGCGAGCGCTTAGC
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * * * * * *
766441 CGACCAGAAGGGCGGGATGTGCAAGCCGGGGATCGA-CTGAGTCCCCCTCTGCGTGCTGCCAATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATC-GGGTCCCCCTCTACGTGCTGTCGATC
* * * * * *
766505 CTGCTGCCGCAACCCTCGGTTCGGT-CGATCTTAGACTGGAAATGAACTCCGTATGCCTAAGCCA
130 CTGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
* ** *
766569 A-TCGACGAAATGAGCGGGCGGGCGGGCGGGCACTACGTCGGCCAGAGAGACGGGATACGCAAGC
195 ACT-GACGAAACGAGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGC
* * * *
766633 CGTGGATTGATAGGGTGGTAGGTGGGTTTTGGCACATCTTCATA-TT-T-TCTG-C-ATGCCA--
259 CGTGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATT
* * * *
766691 ---AT-GC-----CATT-TTACAATGGTCCCTTAAGCCTTCTCGCGAAGTTTCATGGCAAGACGA
324 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
* ** * * *
766746 CTCGTTTTCCATTTTTCATGATTTTTGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTTCG
389 CCCG-TTT-CATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGA-TTTTTTAAATTTTTTTG
* * * * ** * *
766811 GAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATTTTTTTTGAAATACACAAAAAT
451 GAAGTATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAAAAAA
* *
766876 ATTCTGCTAAAAACTCGAAGTGTACAAGATTTTGTGAACATTTGAAAAAAGTGTCCCCATTTCAG
516 ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
* * * *
766941 ACACTTTAATGGCCACTGGCAGCAAACCTATAAATTCTCAAATGCTCTTTAAGGGGGTGTGAGTT
581 ACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAA-GGGGTGTGAGTA
* * * * * *
767006 CTTGAGGTTTGATAAGGGATAGGGGGCCAATATAAGGGCCCATTACCAGCACCCATCGTACATCA
645 CTCGAAGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
* * * * * * * *
767071 TGGGCGCACA-CCCCCTCGGCCCCCTCGACCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTCCA
710 TGTGCGCACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTCTCGA
* * ** * *
767135 GCGATGCTCCGACGATGGTGCCTCGACGAAGAAAAATACGGCTCCAGCACATACCCGAGCCTAGC
775 -CGATGCTCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCAGC
* * * ** ** **
767200 AAGTGCTGCCTCAACCCTGGGTCTAATCCAATCTTAGACTGGGAATGAACTCTGTATG
839 ATGTGCTGCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
* * * *
767258 CTTAGATTGGGAATCAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCAGGCGCTCAGT
1 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
* * * ** *
767323 CGGCCAGAGGGGTGGGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTG-CTGATC
66 CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTC-GATC
* * * * * * * ** * *
767387 CTGCTGCCACAACCCTTGGTTCAGTCCGGTCTTAGACTAGGAATGAACTCCATATTCTTAAGCCA
130 CTGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCA
* * * *
767452 ACCGACAAAATGAGTGGGCGG
195 ACTGACGAAACGAGCGGGCGG
767473 ACAAGCGGGG
Statistics
Matches: 8738, Mismatches: 1646, Indels: 1399
0.74 0.14 0.12
Matches are distributed among these distances:
863 2 0.00
864 2 0.00
865 2 0.00
866 75 0.01
867 15 0.00
868 102 0.01
869 443 0.05
870 530 0.06
872 10 0.00
873 15 0.00
874 21 0.00
875 39 0.00
876 31 0.00
877 17 0.00
878 58 0.01
879 170 0.02
880 72 0.01
881 79 0.01
882 170 0.02
883 67 0.01
884 42 0.00
885 16 0.00
886 283 0.03
887 80 0.01
888 99 0.01
889 106 0.01
890 555 0.06
891 490 0.06
892 559 0.06
893 556 0.06
894 492 0.06
895 75 0.01
896 140 0.02
897 334 0.04
898 167 0.02
899 18 0.00
900 217 0.02
901 708 0.08
902 178 0.02
903 44 0.01
904 10 0.00
905 31 0.00
906 111 0.01
907 333 0.04
908 5 0.00
909 3 0.00
910 4 0.00
911 6 0.00
912 4 0.00
913 4 0.00
914 4 0.00
915 5 0.00
916 2 0.00
917 5 0.00
918 3 0.00
919 3 0.00
920 2 0.00
921 5 0.00
922 4 0.00
923 4 0.00
924 6 0.00
925 4 0.00
926 3 0.00
927 5 0.00
928 13 0.00
929 44 0.01
930 26 0.00
931 8 0.00
932 4 0.00
933 2 0.00
934 5 0.00
935 9 0.00
936 19 0.00
937 12 0.00
938 19 0.00
939 32 0.00
940 15 0.00
941 11 0.00
942 10 0.00
943 11 0.00
944 21 0.00
945 25 0.00
946 30 0.00
947 21 0.00
948 36 0.00
949 7 0.00
950 11 0.00
951 3 0.00
952 7 0.00
953 16 0.00
954 20 0.00
955 8 0.00
957 1 0.00
958 10 0.00
959 10 0.00
960 4 0.00
962 3 0.00
963 2 0.00
964 2 0.00
965 1 0.00
967 1 0.00
968 1 0.00
969 3 0.00
970 3 0.00
971 4 0.00
972 2 0.00
974 1 0.00
975 3 0.00
977 1 0.00
978 1 0.00
979 3 0.00
981 3 0.00
982 7 0.00
984 7 0.00
985 2 0.00
986 8 0.00
987 17 0.00
988 9 0.00
989 1 0.00
991 1 0.00
992 15 0.00
993 10 0.00
994 2 0.00
995 3 0.00
996 3 0.00
997 6 0.00
998 9 0.00
999 3 0.00
1000 5 0.00
1001 1 0.00
1003 2 0.00
1004 4 0.00
1005 12 0.00
1006 12 0.00
1007 6 0.00
1008 4 0.00
1009 14 0.00
1010 45 0.01
1011 5 0.00
1013 29 0.00
1014 12 0.00
1015 10 0.00
1016 3 0.00
1017 6 0.00
1018 12 0.00
1019 7 0.00
1020 6 0.00
1021 15 0.00
1022 216 0.02
1023 21 0.00
1024 70 0.01
1025 101 0.01
1026 94 0.01
1027 110 0.01
1028 83 0.01
1029 60 0.01
1030 88 0.01
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (896 bp):
CTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGC
CGGCCAGAGGGGCGGGATGCGCAAGCCGAGGATCGATCGGGTCCCCCTCTACGTGCTGTCGATCC
TGCTACCGCAACCCTTGATCCGGTCCGATCTTAGACTGGGAATGAACTCTGTATGCCTAAGCCAA
CTGACGAAACGAGCGGGCGGGCGGGCGGGCACTACACCGGCCAGAGAGACGGGATGCGCAAGCCG
TGGATCGATAGGGTGGTAGGTGAGTTTAGGCACATCTTCATATTTCTGTGTGCCAATGCCATTTT
TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACC
CGTTTCATTTTTCATGATTTTCAAAACTTTTTACGGTTCGAGATTTTTTAAATTTTTTTGGAAGT
ATTTTTGGCCCCAAACTTGGTAGACGTAATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCA
GCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACT
TTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGTGTGAGTACTCGAA
GTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCG
CACACCCCCCCCGGCCCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGATTCTCGACGATGC
TCCGACGATGGTGCCCCGATGAAGAAAAATGTGGCTCCAGCACATGCCCGAGCCCAGCATGTGCT
GCCGCAACCCTAGGTCTGGTCTGATCTTAGACTGGGAATGAACTCCATATG
Found at i:759457 original size:26 final size:26
Alignment explanation
Indices: 759406--759458 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 26
759396 CCGATCTGAT
*
759406 CTTAGATTGGGAATGAACTTCATATG
1 CTTAGATTGGGAATGAACTCCATATG
* * *
759432 CTTAGGTTGGGAATGAAGTCCGTATG
1 CTTAGATTGGGAATGAACTCCATATG
759458 C
1 C
759459 CTAAGTCAAC
Statistics
Matches: 23, Mismatches: 4, Indels: 0
0.85 0.15 0.00
Matches are distributed among these distances:
26 23 1.00
ACGTcount: A:0.26, C:0.13, G:0.28, T:0.32
Consensus pattern (26 bp):
CTTAGATTGGGAATGAACTCCATATG
Found at i:760124 original size:26 final size:26
Alignment explanation
Indices: 760088--760140 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
760078 CCGGTCCGAT
760088 CTTAGACTGGGAATGAACT-TCGTATG
1 CTTAGACTGGGAATGAACTCT-GTATG
760114 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCTGTATG
760140 C
1 C
760141 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.17, G:0.26, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCTGTATG
Found at i:760347 original size:172 final size:173
Alignment explanation
Indices: 760058--760471 Score: 533
Period size: 172 Copynumber: 2.3 Consensus size: 173
760048 AGCCCTGCAT
*
760058 GTGCTACCATAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTG
1 GTGCTACCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTG
** ** *
760123 GGAATGAACTCTGTATGCCTAAGTCAACCCACGAAACGAGCGTATTGGCACTCAGCCGACCAGAG
66 GGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAACCGACCAGAG
* *
760188 GGGCATGATACGCAAGCTGGGGATCGATCGGGTCCCTCTCTGC
131 GGGCAGGATACGCAAGCTGGGGATCGATCGGGTCCCCCTCTGC
* * *
760231 GTGCTACCGCAACCCTTGGTCCGGTCCGATCTTAGACTGGGAATGAAC-TCTTATGCTTAGACTG
1 GTGCTACCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTG
* * *
760295 GGAATGAACTCCATATGCCTAAGTCAACCCACGAAATGAGCGTGCGGGCACTCAACCGGCCAGAG
66 GGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAACCGACCAGAG
* * *
760360 GGGCGGGATGCGCAAGCTGGGGATCGGTCGGGTCCCCCTCTGC
131 GGGCAGGATACGCAAGCTGGGGATCGATCGGGTCCCCCTCTGC
* * *
760403 ATGCTGCCGATCCTGCTGTCGCAACCCTCGGTCCGGTTCGATCTTAGACTGGGAATGAACTTCGT
1 --G-T---G---CTAC---CACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGT
760468 ATGC
54 ATGC
760472 CTAAGCTAAC
Statistics
Matches: 207, Mismatches: 21, Indels: 14
0.86 0.09 0.06
Matches are distributed among these distances:
172 110 0.53
173 45 0.22
174 1 0.00
175 1 0.00
178 1 0.00
181 3 0.01
184 39 0.19
185 7 0.03
ACGTcount: A:0.22, C:0.28, G:0.28, T:0.22
Consensus pattern (173 bp):
GTGCTACCACAACCCTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTTCGTATGCTTAGACTG
GGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCACTCAACCGACCAGAG
GGGCAGGATACGCAAGCTGGGGATCGATCGGGTCCCCCTCTGC
Found at i:761203 original size:26 final size:26
Alignment explanation
Indices: 761165--761217 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
761155 CTGATCCAAT
*
761165 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
761191 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
761217 C
1 C
761218 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:762832 original size:26 final size:26
Alignment explanation
Indices: 762803--762855 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
762793 CCAGTCCGAT
*
762803 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
762829 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
762855 C
1 C
762856 GTACGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:763112 original size:893 final size:886
Alignment explanation
Indices: 761266--767472 Score: 7233
Period size: 893 Copynumber: 7.0 Consensus size: 886
761256 CGGCCAGAGC
* * * *
761266 GGCGGCCACTACGCCGGCTAGAGAGA-GAGGATGCGCAAGCCGTGCATCGATAGGGTGGTAGGTG
1 GGCGGGCACTACGCTGGCCAGAGAGACG-GGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
761330 GGTTTAGGCACATCTTCATATTTCTACTTGCCAATACCATTTTTATGGCTTGTAAATTCATACAA
65 GGTTTAGGCACATCTTCATATTTTTGC-TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
761395 TGGTCGCTTAAGCCTTCACGTGAAGTTTCATGGCAAGATGACTCGTTTTCTATTTTTCACGATTT
129 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * * *
761460 TTGAAACTTTTTACGGTTTGGGATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCTAAA-TTG
194 TTAAAACTTTTTATGGTTTGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
* * * * *
761524 TTAGATGTGATCCTTGTATTTTTGTTGGCATGGACAAAAACATTCAGCTAAAAACTCAAAGTGTA
259 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTGTA
* * *
761589 CAAGATTTTGTGACAATTTGAAAACAGTGTCCCTATTTCAGACACTTTAATGGCTACTGGCAGCA
324 CAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCA
*
761654 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATAGGG
389 AACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGG
* **
761719 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGCGCGCACACCCTTATCGTCGG-
454 GGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC----CCCCGGC
** * * * * * *
761783 AACCCCAAT-GCC---ACCGGTC-AGGTTC-TCCGGT--GATGCTCCGGCGATGGTGCCCCGACG
515 CCCCCCGATCGCCGGAACC--CCAATG-CCGT-CGGTCAGGTGCTCCGACGATGGTGCCCCGACG
* * * * **
761840 GAGAAAAATACAGCACCAGCATATGCCCGAGCCCAGCATGTGCTGCCGCAAACCTCATTCCTA-T
576 AAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCC-AGT
* * *
761904 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTA-AATAGGGAATGAACTCCATATGCCTAACT
640 CCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACT-GGGAATGAACTCCGTATGCCTAAGT
* * * * * ** **
761968 CAACCGATGAAAAGAGCGTGCGGGCGCTCAACTGGCCAGAGGGGCAAGATGCGCAAGCAAGGGAT
704 CAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGAT
* * ** * * * * * * **
762033 CGTCCGGGTCCCTCTCTGTATACTGTCGATCCTGCTGCCACAACCCTCAGTTTGATCCAATCTTA
767 CGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGATCTGATCTTA
* *
762098 GACTGGGTATGAACTCCATATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCG
832 GACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGCG
762157 GGCGGGCACTACGCCT-GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
1 GGCGGGCACTACG-CTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * * *
762221 GGTTTACGCACACCTTCATATTTTTGCATGCCACTGGCATTTTTATGGCTTGTAAATTCATACAA
65 GGTTTAGGCACATCTTCATATTTTTGC-TGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
* *
762286 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGACGAGACGACTCGTTTTCTATTTTTCACGATTT
129 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * * * *
762351 TCAAAACTTTCTGTGGTTTGGAATTTTTTAAAATTTTTTCGAAAGGATTTTTGGTCCCAAACTTG
194 TTAAAACTTTTTATGGTTTGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTG
*
762416 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCGAAGTGTA
259 GTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTGTA
* *
762481 CAAGTTTTTGTGACCATTTGAAAAAAAGTGTCCTCATTTCAGACACTTTAATGGCTACTGGCAGC
324 CAAGATTTTGTGACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGC
* *
762546 AAACCTATAAAATCTC-AATGCTCTTTAAGGGTGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
388 AAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGG
* *
762610 GAGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCAACCGGCCC
453 GGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCC-CCCGGCCC
* * **
762675 CCCCGATCGCCGGAACCCTAATGCCGTCGGTCAGGTTCTCCGACGATGGTGCCCCGGTGAAGAAA
517 CCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTGCTCCGACGATGGTGCCCCGACGAAGAAA
** * ** * *
762740 AATGTGGCTCCAGCACATGCCCGAGCCCAAAATTTGCTACCGCAACCCTCGGTCCAGTCCGATCT
582 AATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCT
* * * * *
762805 TAGGCTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCGTACGTCAACCTAT
647 TAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCAC
* ** * ** *
762870 GAAACGAGCGTGCAGGCGCTTAGCCGGGTAGAGGGTGGGATGCGTTAGCCAGGGATCGACCGGGT
712 GAAACGAGCGTGC-GGCGCTCAGCCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGT
* * * * * *
762935 CCCCCTCTGCGTGCTACCGATCCTGCTACTGTAACCCTTGGTCTGGTCTGATCTTAGATTGGGAA
776 CCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAA
* * * *
763000 TGGACTCCGTACGCCTAAGCCAACCGATGAAACGGGCGGGTGGGCGGGCG
841 TGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC----GGGCGGGCG
* *
763050 GGCGGGCACTACGCTGGCAAGAGAGACGGGATGCGCAAGCCGTAGATCGATAGGGTGGTAGGTGG
1 GGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
* * * *
763115 GTTTAGGCACATCTTCATATTTCTATG-TGCCAATTCCTTTTTTATGGCTTGCAAATTCATACCA
66 GTTTAGGCACATCTTCATATTT-T-TGCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAA
763179 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
129 TGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTT
* * * *
763244 TTAAAACTTTTT-TGGTTCGGGATTTTTTTTAAATTTTTTCGGAAAGAGTTTTGGCCCCAAACTT
194 TTAAAACTTTTTATGGTT-TGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * *
763308 GGTAGACGAGATCCTTGTATTTTTCTTGGCATG-AACAAAAAAATTCAGCTAAAAACTCGAAGTG
258 GGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAA-AAAAAAATTCAGCTAAAAACTCAAAGTG
* *
763372 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCGCATTTGAGACAC-----TGGCTACTGGCAG
322 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
763432 CAAACCTGTAAAATCTCAAATACTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGGGATAG
387 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
**
763497 GGGGATAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
452 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
* * * ** *
763562 CCTCGATCGCCCGAACCCCAGTGCCACCGGTCAGGTTCTCCGGCGATGCTTTGGCGATGGTGCCC
517 CCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTGCT-C--CGA--------CGATGGTGCCC
* * * *
763627 CGACGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGCGCTGCCGCAA-CTTGGGTC
571 CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* *** * * * * * *
763691 CAGTCTGATCTTAGACTCAAAATGAACTCTGTATGCTTAGAATTGCAATAAACTACGTATGCCTA
636 CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
763756 AGTCAACCCACGAAACAAACGTGCTTGCACTCAGTCGGCCAGAGGGGCGGGATGCGCAAGCCGGG
701 AGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGG
* * * * * * *
763821 GATCGATCGGGTCCCCCTTTGCGTGCTGCCGATCCTACTACTGCAACCCTTGATCCGATCTGATC
764 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGATCTGATC
* *
763886 TTAGACTGGG-ATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAGCAGGCGGGCAG
829 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGC-G
* * * *
763944 GCGAATGGGCACTACGCCGGCCAGGGAGACGGGATGCGCAAGTCGTGGATCGATAGGGTGGTAGG
1 G-G--CGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGG
* * *
764009 TGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATTCCATTTTTATGGCTTGTAAATTCATTC
63 TGGGTTTAGGCACATCTTCATATTTTTGC-TGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
*
764074 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
127 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGAT
* * * * * * *
764139 TTTTGAAACTTTTTACGG-TCGGGATTTTTTAAAATTTTTTTGGAAGGGGTTTTGCCCCCAAACT
192 TTTTAAAACTTTTTATGGTTTGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
** *
764203 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGGGAAAAAACATTCAGCTAAAAACTCAAAGTG
257 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTG
* * *
764268 TACAAGATTTTGTGACAATTTGAAAAACGTGTCCCCATTTCAGACACTTTAATGGCTACTAGCAG
322 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
* *
764333 CAAACCTGTAAAATCTCAAATGCTC-TTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGAGACAG
387 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
764397 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
452 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
* *
764462 CCCCGATCGCCGGAACCCCAATGTCGTCGGTCAAGTTTTGCGACGATGCTCCGGCGATGGTGCCC
517 CCCCGATCGCCGGAACCCCAATGCCGTCGGTC-A-------G--G-TGCTCCGACGATGGTGCCC
* * * * * *
764527 CGATGAAGAAAAATATGGCACTAGCACATGCCCGAGCACAGCATGTGCTGGCGCAACCCTCGATC
571 CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* *
764592 C-GATCTGATCTTAGACTGGAAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
636 CAG-TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCT
* * *
764656 AAGTCAACCCACGAAATGAGTGTGCGGGCGCTCAGCCGGCCAGAGGGGCAGGATGCGCAAGCCGG
700 AAGTCAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGG
* * * * * * *
764721 GGATTGACCGGGTCCCCCTCTACGTGCTGTCAATCCTGCTACCACAACCCTTGGTCTGCTCTGAT
763 GGATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGATCTGAT
* * ** * * *
764786 TTTAGACTGGAAATGAACTTTGTATGCCTAAGCCAACTGATGAAACGA----GCGAGCG
828 CTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* *
764841 GGTGGGCACTACGCCGGCCA-ATGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
1 GGCGGGCACTACGCTGGCCAGA-GAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
764905 GGTTT-GG-GCA----C--A----T-CT-----T--CA----TATGGC-TGTAAATTCATACAAT
65 GGTTTAGGCACATCTTCATATTTTTGCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
*** *
764945 GGTCTGATAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACAATTTT
130 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * * * *
765010 CAAAAC-TTTT-TGCGATTCGAGATTTTTTAAAATCTTTTCAGAAGGATTTTTGGCCCCAAACTT
195 TAAAACTTTTTATG-GTTTGGA-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTT
* * * * *
765073 GGTAGACATGGTCCTAGTATTTTT-TATGGCATGCACAAAAAAATTCATCTAAAAACTCAAAGTG
258 GGTAGACGTGATCCTTGTATTTTTGT-TGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTG
* * *
765137 TATAGGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAAACACTTTAATGGCTACTGGCAG
322 TACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAG
*
765202 CAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
387 CAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAG
** * *
765267 GCTGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATCATGTGCGCACACCCCCCTGGCCC
452 GGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCC
* * * *
765332 CCTCGATCGTCGGAACCCCAATGTCGCCAGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGGCC
517 CCCCGATCGCCGGAACCCCAA--T-GCC-GTC-GG---T-CAG-G-TGCTCCGACGATGGTGCCC
* * * * * * *
765397 CGACGAAAAAAAATGCGACACCAGCACATGCCTGATCCCAGCATGTGCTGTCGCAACCCTCGCTC
571 CGACGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTC
* * * * * *
765462 CGGTCAGATCTTAGATTAGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTGCGTATGCCTA
636 CAGTCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTA
* * * * *
765527 AGTCAACCCACAAAACGAGCGTGCGAGCGGTCAGTCGGCCAGAGGGGCGGGATACGCAAGCAGGG
701 AGTCAACCCACGAAACGAGCGTGCG-GCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGG
* * ** *** * * ** * *
765592 GATCGATCGGGTCCCCCTTTATGTGCTGCCGATCCTGCTGTTGTAACCCACAATCCGATCCGATC
764 GATCGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGATCTGATC
*
765657 TTAGACTGGGAATGAATTCCGTATGCCTAAGCCAACCGACG-AA--A-----CGGGCG
829 TTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* * *
765707 GACGGGTACTACG-TCGGCCAGAGAGACAGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
1 GGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
*
765771 GGTTTAGGCACATCTTCATATTTCTGTGC-GCTAATGCCATTTTTATGGCTTGTAAATTCATACA
65 GGTTTAGGCACATCTTCATATTT-T-TGCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACA
* * *
765835 ATGGTCCTTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTTGTTTTCTATTTTTCATGATT
128 ATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATT
* * *
765900 TTCAAAACTTTTTACGGTTCAGG-ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
193 TTTAAAACTTTTTATGGTT-TGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACT
* * * *
765964 TGGCAGACGTGATCCTTGTGTTTTTGTTGGCATGCAAAAAATATTTCTA-CTAAAAACTCAAAGT
257 TGGTAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTC-AGCTAAAAACTCAAAGT
766028 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
321 GTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCA
* * *
766093 GCAAACCTGTAAAATCTCAAATGATCTTTAA-AGGATGTGAGTTCTCGAGGTTTGATGAGGGATA
386 GCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATA
* * * * *
766157 GGGGGCCAACATAAGGGCCAAGTACCAGCACCCATTGCACGTCATGTGCGCACACCGCACCCAG-
451 GGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACC-CCCCCGGC
* * * ** **
766221 CCCCCCGATCGCCGGAACCCTAATGCCGCCGGTCAGGTTCTCCGGTGATGGTGCCCCGGTGAAGA
515 CCCCCCGATCGCCGGAACCCCAATGCCGTCGGTCAGGTGCTCCGACGATGGTGCCCCGACGAAGA
* * * *
766286 AAAATATGGCACCAACACATGCCCGAGCCCAACATGTGCTGCCGTAACCCTCGGTCCAGT-CGAT
580 AAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGAT
* * * *
766350 CTTAGACTGGGAATGAACTCTGTATGCTTAGACTGGGAATGAATTGCGTACGCCTAAGTCAACCC
645 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCC
* * * * *
766415 ACGAAAAGAGCGTGCGAGCGCTTAGCCGACCAGAAGGGCGGGATGTGCAAGCCGGGGATCGACTG
710 ACGAAACGAGCGTGCG-GCGCTCAGCCGGCCAG-AGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * * *
766480 AGTCCCCCTCTGCGTGCTGCCAATCCTGCTGCCGCAACCCTCGGT-TCGGTC-GATCTTAGACTG
773 GGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCT-GATCTGATCTTAGACTG
* * *
766543 GAAATGAACTCCGTATGCCTAAGCCAATCGACGAAATGAGCGGGCGGGCG
837 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
* *
766593 GGCGGGCACTACG-TCGGCCAGAGAGACGGGATACGCAAGCCGTGGATTGATAGGGTGGTAGGTG
1 GGCGGGCACTACGCT-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTG
* * *
766657 GGTTTTGGCACATCTTCATA-TTTT-CTG-C-ATGCCA-----AT-GC-----CATT-TTACAAT
65 GGTTTAGGCACATCTTCATATTTTTGCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAAT
* * * *
766706 GGTCCCTTAAGCCTTCTCGCGAAGTTTCATGGCAAGACGACTCGTTTTCCATTTTTCATGATTTT
130 GGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTT
* * * *
766771 TGAAACTTTTTATGGTTCGGGATTTTTTTAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
195 TAAAACTTTTTATGGTTTGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGG
* ** * * * * *
766836 TAGACGTGATCCTTGTATTTTTTTTGAAATACACAAAAATATTCTGCTAAAAACTCGAAGTGTAC
260 TAGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTGTAC
* *
766901 AAGATTTTGTGAACATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCCACTGGCAGCAA
325 AAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAA
* * * *
766966 ACCTATAAATTCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATAAGGGATAGGGG
390 ACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGG
* * * * * *
767031 GCCAATATAAGGGCCCATTACCAGCACCCATCGTACATCATGGGCGCACACCCCCTCGGCCCCCT
455 GCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCC
* *
767096 CGACCGCCGGAACCCCAATGCCGCCTGTCAGGTTCTCCAGCGATGCTCCGACGATGGTGCCTCGA
520 CGATCGCCGGAACCCCAAT---GCC-GTC-GG---T-CAG-G-TGCTCCGACGATGGTGCCCCGA
* * * * * * * *
767161 CGAAGAAAAATACGGCTCCAGCACATACCCGAGCCTAGCAAGTGCTGCCTCAACCCTGGGTCTAA
574 CGAAGAAAAATACGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAG
* * * *
767226 TCCAATCTTAGACTGGGAATGAACTCTGTATGCTTAGATTGGGAATCAACTCCGTATGCCTAAGT
639 TCCGATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGT
* * *
767291 CAACCCACGAAACGAGCGTGCAGGCGCTCAGTCGGCCAGAGGGGTGGGATGCGTAAGCCGGGGAT
704 CAACCCACGAAACGAGCGTGC-GGCGCTCAGCCGGCCAGA-GGGCGGGATGCGCAAGCCGGGGAT
* * * * * * * *
767356 CGGCCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCCTTGGT-TCAGTCCGGTCTT
767 CGACCGGGTCCCCCTCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGA-TCTGATCTT
* * * * * * *
767420 AGACTAGGAATGAACTCCATATTCTTAAGCCAACCGACAAAATGAGTGGGCGG
831 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGG
767473 ACAAGCGGGG
Statistics
Matches: 4565, Mismatches: 603, Indels: 304
0.83 0.11 0.06
Matches are distributed among these distances:
866 67 0.01
867 9 0.00
868 86 0.02
869 448 0.10
870 486 0.11
871 2 0.00
872 2 0.00
873 7 0.00
874 6 0.00
875 7 0.00
876 2 0.00
878 44 0.01
879 157 0.03
880 74 0.02
881 81 0.02
882 162 0.04
883 54 0.01
884 1 0.00
885 3 0.00
886 87 0.02
887 73 0.02
888 104 0.02
889 6 0.00
890 9 0.00
891 334 0.07
892 486 0.11
893 492 0.11
894 229 0.05
895 7 0.00
896 139 0.03
897 314 0.07
898 148 0.03
900 186 0.04
901 214 0.05
902 31 0.01
908 3 0.00
910 2 0.00
911 3 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (886 bp):
GGCGGGCACTACGCTGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGG
GTTTAGGCACATCTTCATATTTTTGCTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATG
GTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTT
AAAACTTTTTATGGTTTGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACTTGGT
AGACGTGATCCTTGTATTTTTGTTGGCATGCAAAAAAAAATTCAGCTAAAAACTCAAAGTGTACA
AGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAA
CCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGG
CCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCCGGCCCCCCC
GATCGCCGGAACCCCAATGCCGTCGGTCAGGTGCTCCGACGATGGTGCCCCGACGAAGAAAAATA
CGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCAGTCCGATCTTAGA
CTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCAACCCACGAAA
CGAGCGTGCGGCGCTCAGCCGGCCAGAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCC
TCTGCGTGCTGCCGATCCTGCTACCGCAACCCTCGGTCTGATCTGATCTTAGACTGGGAATGAAC
TCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCG
Found at i:764630 original size:26 final size:26
Alignment explanation
Indices: 764601--764653 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
764591 CCGATCTGAT
764601 CTTAGACTGGAAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
*
764627 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGAAATGAACTCCGTATG
764653 C
1 C
764654 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTCCGTATG
Found at i:765501 original size:26 final size:26
Alignment explanation
Indices: 765471--765523 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
765461 CCGGTCAGAT
*
765471 CTTAGATTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
765497 CTTAGACTAGGAATGAACTGCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
765523 C
1 C
765524 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.30, C:0.17, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:767268 original size:26 final size:26
Alignment explanation
Indices: 767232--767284 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
767222 CTAATCCAAT
* *
767232 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
767258 CTTAGATTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
767284 C
1 C
767285 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:767631 original size:150 final size:150
Alignment explanation
Indices: 767337--767624 Score: 400
Period size: 150 Copynumber: 1.9 Consensus size: 150
767327 CAGAGGGGTG
* *
767337 GGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCC
1 GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCC
** * * * * *
767402 TTGGTTCAGTCCGGTCTTAGACTAGGAATGAACTCCATATTCTTAAGCCAACCGACAAAATGAGT
66 TCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCATATTCTTAAGCCAACAGACAAAACGAGC
767467 GGGCGGACAAGCGGGGGGCA
131 GGGCGGACAAGCGGGGGGCA
* *
767487 GGATGCGCAAGCCGGTGATCGATCGGGTCCCCCTCTGCGTGCTG-TCGATCCTGCTGCCACAACC
1 GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATCCTGCTGCCACAACC
* * * **
767551 CTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGTC-TAAGCCAACAGATGAAACGA
65 CTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCATAT-TCTTAAGCCAACAGACAAAACGA
767615 GCGGGCGGAC
129 GCGGGCGGAC
767625 GGGCGGGTAC
Statistics
Matches: 120, Mismatches: 16, Indels: 4
0.86 0.11 0.03
Matches are distributed among these distances:
149 1 0.01
150 117 0.98
151 2 0.02
ACGTcount: A:0.21, C:0.29, G:0.30, T:0.20
Consensus pattern (150 bp):
GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCC
TCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCATATTCTTAAGCCAACAGACAAAACGAGC
GGGCGGACAAGCGGGGGGCA
Found at i:769188 original size:26 final size:26
Alignment explanation
Indices: 769152--769204 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
769142 CTAATCCAAT
* *
769152 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
*
769178 CTTAGATTGGGAATCAACTCCGTATG
1 CTTAGACTGGGAATCAACTCCGTATG
769204 C
1 C
769205 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.26, C:0.19, G:0.25, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATCAACTCCGTATG
Found at i:769541 original size:150 final size:150
Alignment explanation
Indices: 769257--769551 Score: 387
Period size: 150 Copynumber: 2.0 Consensus size: 150
769247 CAGAGGGGTG
* *
769257 GGATGCGTAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCC
1 GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCC
** * * * * * * *
769322 TTGGTTCAGTCTGGTCTTAGACTAGGAATGAACTCCATATTCTTAAGCCGACCGACAAAATGAGT
66 TCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCATATTCTTAAGCCAACAGACAAAACGAGC
769387 GGGCGGACAGGCGGGGGGCA
131 GGGCGGACAGGCGGGGGGCA
* *
769407 GGATGCGCAAGCCGGTGATCGATCGGGTCCCCCTCTGCGTGCTG-TCGATCCTGCTGCCACAACC
1 GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCT-GATCCTGCTGCCACAACC
* * * **
769471 CTCAGTCCGGTCCGATCTTAGACTGGGAATGAACTCCGTATGTC-TAAGCCAACAGATGAAACGA
65 CTCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCATAT-TCTTAAGCCAACAGACAAAACGA
*
769535 GCGGGCGGACGGGCGGG
129 GCGGGCGGACAGGCGGG
769552 TACTACGCCG
Statistics
Matches: 124, Mismatches: 19, Indels: 4
0.84 0.13 0.03
Matches are distributed among these distances:
149 1 0.01
150 121 0.98
151 2 0.02
ACGTcount: A:0.20, C:0.28, G:0.32, T:0.20
Consensus pattern (150 bp):
GGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTGCGTGCTGCTGATCCTGCTGCCACAACCC
TCAGTCCAGTCCGATCTTAGACTAGGAATGAACTCCATATTCTTAAGCCAACAGACAAAACGAGC
GGGCGGACAGGCGGGGGGCA
Found at i:770227 original size:26 final size:26
Alignment explanation
Indices: 770191--770243 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
770181 TCGGTCTGAT
*
770191 CTTAGACTGGGAATGAGCTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
770217 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
770243 C
1 C
770244 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:772033 original size:26 final size:26
Alignment explanation
Indices: 771981--772033 Score: 61
Period size: 26 Copynumber: 2.0 Consensus size: 26
771971 CTGGTCCAAT
*
771981 CTTAGACTGGGAACGAACTCTGCATG
1 CTTAGACTGGGAACGAACTCCGCATG
* ** *
772007 CTTAGATTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAACGAACTCCGCATG
772033 C
1 C
772034 CTAAGTGAAC
Statistics
Matches: 22, Mismatches: 5, Indels: 0
0.81 0.19 0.00
Matches are distributed among these distances:
26 22 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAACGAACTCCGCATG
Found at i:774771 original size:860 final size:859
Alignment explanation
Indices: 772416--780204 Score: 8511
Period size: 860 Copynumber: 8.8 Consensus size: 859
772406 AAATTACTCA
* * *
772416 AAGTCTACAATATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* **
772481 GGCAGCAAACTTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGCTGTTT-ATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * *
772545 GATAGGGGGCCAATATGAGGGCCAAGTACCAGCACCCATCGCAC-TTATGTGCGTACA-CCCCCG
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* ** * * * * * ***
772608 GGCCCCCCGATCACCGGAACCCCAATGCCG-TCGGTCAAGTTCTCCGGCGATGGTGCCGCGAACA
196 GCCCCCCCGATCGTCGAAACCCCAATGCCGCTCAGTCAGGTTCTCCGACGATGGTGCCTCGGTGA
* * ** *
772672 A-ACAAAATGTGGCACCAGGCACATGCGCCGAGCCTAGCACTGTGCTGCCAAAACCCGCTCAGTC
261 AGA-AAAATGCGGCACCA-GCACATGC-CCGAGCCCAGCA-TGTGCTGCCGCAA-CC-CTCGGTC
* * * *
772736 CGGTCCGATCTTAGACTGGGAATGAACTCCCGTATGCGTCTAAGTTAACCCAC-AAACAAGCGTA
320 CGGTCCGATCTTAGACTGGGAATGAACT-CCATATGC--CTAAGTCAACCCACGAAACGAGCGTG
* * * * *
772800 CAGGTGCTCAAGCCGG-CAAGAGCGGCGGGATGCCGCAAACCGGGGAATTGACCGGAGTCCCCCT
382 CGGGCGCTC-AGCCGGCCAAAAG-GGCGGGATG-CGCAAGCCGGGG-ATCGACCGG-GTCCCCCT
* * * *
772864 CTACGTGCTGTCGATCCT-CTGCCGCAACCCTCG-GTCTGAT-TCGATCTTAGGCTGGGAATGAA
442 CTACGTGCTGTCGATCCTGCTGCCGCAACCCTTGATTC-GGTCT-GATCTTAGACTGGGAATGAA
* *
772926 CTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGGGCAC-ACTTCGCGGCCAG
505 CTCCGTATGCCTAAGCCAACCGACGAAACGA----GCGGGCGGGTGGGCACTACGT--CGGCCAG
772990 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
564 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * ** * *
773055 TCTGCATGCCAATGCCATTTTTCTCACTTGTAAATTCATACAGTGGTCCCTTCAGCCTTCACGTG
629 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * ** *
773120 AAGTTTCATGGCAAGACGACTCAGTTTT-TATTTTTCACGATGTTT-GAAACTTTTTTTGGTTCG
694 AAGTTTCATGGCAAGACGACTC-GTTTTCTATTTTTCATGAT-TTTCAAAACTTTTTGCGGTTTG
* * * *
773183 GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACGTGATCCTTGTATT
757 AGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAATTTAGTAGACGTGATCCTTGTATT
773248 TTTGTTGGCATGCACAAAAACACATTCAGCTAAAAACTTG
822 TTTGTTGGCATGCACAAAAA-A-ATTCAGCTAAAAACTTG
* * *
773288 AACTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCGGACACTTTAATGGCTACG
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
*
773353 GGCAGCAAACCTATAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
773418 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCA
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
773483 GCCCCCCCGATCGTCGAAACCCCAATGCCGCT-AGTCAGGTTCTCCGACGATGGTGCCTCGGTGA
196 GCCCCCCCGATCGTCGAAACCCCAATGCCGCTCAGTCAGGTTCTCCGACGATGGTGCCTCGGTGA
* * * * * * * *
773547 AGAAAAATACGGCACTAGCACATTCTCGAGCCCAGCATGTGCTACTGTAACCCTCGGTCCGGTTC
261 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCC
* * * * *
773612 GATCTTAGACTGGGAGTGAACTCCATATGCCTAAATCAACCCACAAAACGAGCATGCAGGCGCTC
326 GATCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
* * * * ** * *
773677 AGCTGGCCAAAAGGGCGGGATGCACAAGCTGTGGATCGACTAGGTCCCCCTCTACGTACTGTTGA
391 AGCCGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGA
*
773742 TCCTGCTGCCGCAACCCTTGATTCGGTCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAGC
456 TCCTGCTGCCGCAACCCTTGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
** *
773807 CAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCTAAAGCAGA
521 CAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG-
* * * * *
773872 TGGAACGATAGGGTGGTAGGTGGGTTCAGGTACATCTTCTTATTTCTGTGTGCCAATGCCATTTT
585 TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTT
*
773937 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGACGACT
650 TATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACT
* *
774002 CGTTTTCTATTTTTCATGATTTTCAAAACATTTTGCGGTTTGAGATTTTTAAAAATTTTTTCGGA
715 CGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGA
* * * * *
774067 AGGAGTTTTGGTCCCAAATTTAGTAAATGTGATCCTTGTATTTTTATAGGCATGCACAAAAAAAT
780 AGGAGTTTTGGCCCCAAATTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAAT
*
774132 TCAGTTAAAAACTTG
845 TCAGCTAAAAACTTG
* *
774147 AAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCTGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
774212 GGTAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
774277 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGTGCACACCCCCCA
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
774342 GCCCCCCCGATCGTCGAAACCCCAATGCCGCT-AGTCAGGTTCTCCGACGATGGTGCCTCGGTGA
196 GCCCCCCCGATCGTCGAAACCCCAATGCCGCTCAGTCAGGTTCTCCGACGATGGTGCCTCGGTGA
* * * * * * *
774406 AGAAAAATACGGCACTAGCACATTCTCGAGCCCAGCATGTGCTACTGTAACCCTCGGGTCCGGTC
261 AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTC-GGTCCGGTC
* * * * *
774471 CGATCTTAGACTGGGAGTGAACTCCATATGCCTAAATCAACCCACAAAACGAGCATGCAGGCGCT
325 CGATCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCT
* * * * * *
774536 CAGCTGGCCAAAAGGGCGGGATGCACAAGCTGGGGATCGACCAGGTCCCCCTCTACGTACTGTTG
390 CAGCCGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCG
*
774601 ATCCTGCTGCCGCAACCCTTGATTCGGTCTGATCCTAGACTGGGAATGAACTCCGTATGCCTAAG
455 ATCCTGCTGCCGCAACCCTTGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAG
** *
774666 CCAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCTAAAGCAG
520 CCAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCG
* * * * *
774731 ATGGAACGATAGGGTGGTAGGTGGGTTCAGGTACATCTTCTTATTTCTGTGTGCCAATGCCATTT
585 -TGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTT
*
774796 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCTTGGCAAGACGAC
649 TTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGAC
* ** * * *
774861 TTGTTTTTCTATTTTTCATGATTTTTGAAACTTTTTAC-GATTCAGGATTTTTTAAAATTTTTTC
714 TCG-TTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGA-GATTTTTTAAAATTTTTTC
* * * * *
774925 GAAAGGATTTTTGGCCCCAGATATT-GTAGACATGATCCTTGTATTTTTGTTGGCATGCATAAAA
777 GGAAGGAGTTTTGGCCCCAAAT-TTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAA
774989 AAATTCAGCT-AAAACTTG
841 AAATTCAGCTAAAAACTTG
* * *
775007 AAGTGTACAAGATTTTGGGACCATTTGAAAAAAGTGTCCCCATTCCAAACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
775072 AGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * *
775137 GA-AGGGGGCCAATATAAGGGCCAAGTACCAGCACCCGTCGCACATCATTTGCGCACGCCCCCTC
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-C
* * * *
775201 GGCCCTCCCGATCGTCGGAACCCCAATGCCGTCGATCAAGTTCTCCGGTGATGCTCCGAAGATGG
195 GGCCCCCCCGATCGTCGAAACCCCAATGCCG-C--TC-AG---TCAGGT--T-CTCCGACGATGG
* * * * * * * * *
775266 TGCCCCGATGAAAAAAAATACGGTACCAACACTTGCCCAAGCCCAGCATGTACTGCCGCAACCCG
250 TGCCTCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC-
* *
775331 CGGTCCAGTTCGATCTTAGACTTGGAATGAACTCCGTATGCTTAGACTGGGAATTAACTCCGTAT
313 C--T-C-G---G-TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTCCATAT
* * * * *
775396 GCCTAAGTCAACCCATGAAACGAGCGTGCGGGTGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAA
354 GCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAAGGGCGGGATGCGCAAG
* ** ** * * * * * * ** *
775461 CTGCAGATCGGTCGAGTACCCCTCTGCATACTATCGATCCTGCTATCGCAACCCTCGATTCGGTC
419 CCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCGCAACCCTTGATTCGGTC
** * *
775526 AAATCATAGACTGGGAATGAACTCCGTATGCCTAAGCAAACCGACGAAACGAGCGGGCGGACGGA
484 TGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGC--G-GG-C-G-
* * *
775591 CGGTCGGGCACTACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGATGGTAGGT
543 -GGT-GGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGT
* * *
775656 GGGTTTAGGCATCATCTTCATATTTCTACATTCCAATGCCATTTTTATGGCTTGTAAATTCATAC
606 GGGTTTAGGCA-CATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATAC
*
775721 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGGAAGACGACTCGTTTTCTATTTTTCATGAT
670 AATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGAT
* * *
775786 TTTCAAAACATTTTGCGGTTTGAGATTTTTAAAAATTTTTTCGGAAGGAGTTTTGGTCCCAAATT
735 TTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAATT
* * * * *
775851 TAGTAAATGTGATCCTTGTATTTTTATAGGCATGCACAAAAAAATTCAGTTAAAAACTTG
800 TAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTG
* *
775911 AAGTGTACAAGATTTTGCGACCATTTGAAAAAAGTGTCCCCATTTCTGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * *
775976 GGTAGCAAACCTGTAAAATCTCAAATTCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
776041 GATAGGGGGCCAATATAAGGGCCAAGTACCAGC-CCTCATCGCACATCTTGTGCGCATACCCCCC
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACC-CATCGCACATCATGTGCGC--ACACCCC
* *
776105 TCTCGGCCCCCCCGATCGTCGAAACCCCAATGCCGTCGATCATGTTCTCCGGCGATGCTCCGACG
193 -C-CGGCCCCCCCGATCGTCGAAACCCCAATGCCG-C--TCA-G---T-CAG-G-TTCTCCGACG
* * * *
776170 ATGGTGCCCCAGG-GAAGAAAAATGCAGCACCAGCACATGCCCGAGCCTAGCATGTGCTGCCGAA
246 ATGGTGCCTC-GGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCA
776234 ACCCTCGATCCGGTCCGATCTTAGACTAGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTC
310 A-CC-C--T-C-G---G-TC-----C---G---G---TCCG-AT-CTTAGACTGGGAATGAACTC
* * * *
776299 CGTATGCCTAAGTCAACCCACGAAACGAGCGTACGGGCGCTCAGCCGGCC-AGAGAGGCGGAATG
349 CATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAAG-GGCGGGATG
* * * * * * * * *
776363 CGCAAGCCGGGGATCGGCCGGGTCCCCCTCTGCGTGCTGCCGATCCTGGTACCACAATCGTTGGT
413 CGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCGCAACCCTTGAT
* ** * * * *
776428 CCGGTCCAATCTTAGACTAGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACAAACGTGCG
478 TCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCG
* * * *
776493 GAGGGCAGGCACTACG-CTGGCCAGAGAGACAGGATGCGCAAGCCATGGATCGATAGGGTGGTAA
543 G-GTG--GGCACTACGTC-GGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAG
*
776557 GTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATA
604 GTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATA
* * *
776622 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACCCGTTTTCTATTTTCCACGA
669 CAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGA
* * * * * * *
776687 TTTTTAAAACTTTTTGCGGTTCGGGATTTTTTATAATTTTTTTGCAAGGATTTTTGGCCCCAAA-
734 TTTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAAT
* * * * *
776751 CTATTAGATGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAATTTCAGCTAAAAACTCG
799 TTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTG
*
776812 AAGTGTGCAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
*
776877 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGATGTTTGATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
776942 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCTTGTACGCACACCCCCCG
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
* * * * * * * *
777007 GCCCCTCTGATCG-CCATAAGCCAAATGCCACCGGC-CAGGTTCTCTGGCGATGCTCCAACGATG
196 GCCCCCCCGATCGTCGA-AACCCCAATG---CC-GCTCA-G---TC-AG-G-TTCTCCGACGATG
* * * *
777070 GTGGCTCGGTGAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGTTGTCAG-AACC
249 GTGCCTCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTG-CCGCAACC
* * ** * ** *
777134 CGCGATCTAGTCCGATCTTAGACTGGGAATTAACTCTGTATGCCTAAGTCAACCCATGAAACGAG
313 CTCGGTCCGGTCCGATCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAG
* * * * * * **
777199 CGTGCAGACGCTCAGCCGGCCAGAGGGGCGGGATGCGCATGCCGGGGTTCGGTCGGGTCCCCCTC
378 CGTGCGGGCGCTCAGCCGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTC
* * * * * * *
777264 TACGTGCTGTCGATCTTGCTG-CACAACCC-TCAGTCTGATCTGAGCTTAGACTGGGAATGAAGT
443 TACGTGCTGTCGATCCTGCTGCCGCAACCCTTGATTC-GGTCTGATCTTAGACTGGGAATGAACT
* * *
777327 CCGTATGCCTAAGCCAACCGACGAAACGAGCGGGTAGACGACGGAGCAGGCACTATGCCGGCCAG
507 CCGTATGCCTAAGCCAACCGACGAAACGAGC-GG--G-CG--GGTG--GGCACTACGTCGGCCAG
* *
777392 AGAGACGGGATGCGCAAGCCATGGATCGATAGGGTGGTAGGTGGGTTTAGGCATATCTTCATATT
564 AGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATT
* * **
777457 TTTGCGTGCCAATACTGTTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
629 TCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTG
* * * * *
777522 AAGTTTCATGGCTAGACAACTCGTTTTCTATTTTTTATGATTTTCAAAACTTTTTACGGTTTGGG
694 AAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGAG
* * * * *
777587 ATTTTTTAAAATTTTTTTGGAAGGAGTTTTGGCCCCAAA-CTATTAGACATGGTCCTTGTATTTT
759 ATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAATTTAGTAGACGTGATCCTTGTATTTT
* *
777651 TGTTGGCATGCATAAAAAAATTCAGCTAAAAAGTTG
824 TGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTG
* *
777687 AAGTGTACAAGATTTTGTGACCATTGGAAAAACGTGTCCCCATTTCAGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
777752 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAAG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * * *
777817 GATAGGGGGCCAATATAAGGGCCAAGCACAAGCACCCATCGTACATCTTGTGCGCACACCCCCCC
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC
* * * * * * *
777882 TGCCCCCCCGATCATCGAAACCCCAATGTC-ATCGGTCAGGTTCTCCGACGATGCT--C-CGGCG
195 GGCCCCCCCGATCGTCGAAACCCCAATGCCGCTCAGTCAGGTTCTCCGACGATGGTGCCTCGGTG
** * ** * *
777943 AAGAAAAATATGACACCAGCACATGCCCGAGCCCAGCATGTGCTGTTGTAACCCTCGGTCCAGTC
260 AAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTC
*
778008 CAATCTTAGACTGGGAATGAACTCCGTATGCTTAGACTCGGAATGAACTCTGTATGCTTAAGTCA
325 CGATCTTAGACTGGGAATGAACT-C-----C----A-T----ATG----C------C-TAAGTCA
* * * * * * * * *
778073 ACCCACAAAACAAGCTTACGGGTGCTCAGTCGGCCAGAGGGGCGGGATGCACAAGCCGGGGATCG
364 ACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCG
* * ** * * * * *
778138 GCCGGGTCCCCCTCTACGTGCTGTCGATCATGCTGTAGCAACCCTCGGTCCGATCCGATCTTAGA
429 ACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCGCAACCCTTGATTCGGTCTGATCTTAGA
* *
778203 CTGGGAATGAACTCTGTATGCCTAAGCCAGCCGACGAAACGAGCGGGC---T-GGCACTACGTCG
494 CTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCG
* * * *
778264 GCCAGAGAGACAGGATGCGGAAGCCGTGGATCGGTAGCGTGGTAGGTGGGTTTAGGCACATCTTC
559 GCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTC
** *
778329 ATATTTCTATGTGCCAATGCCATTTTTATGTCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
624 ATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTC
* * **
778394 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTTTATTTTTCATGA-TTTCTGAAACTTTTT-ATG
689 ACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTC-AAAACTTTTTGCGG
* * * * * *
778457 TTTCGGGATTTTTTAAAAATTTTTCGGTAGGAGTTTTGACCCCAAACTTGGTAGACGTGATCCTT
753 TTT-GAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAATTTAGTAGACGTGATCCTT
* * *
778522 GTATTTTTGTTGGCATGCACAAAAAAATTTAGCTAAACACTTC
817 GTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTG
778565 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* * * * *
778630 GGCAGCAAATCTGTAAATTCTCAAATGCTCTTTAAGGGGGTGTGAGTTTTCAAGGTTTGATGGGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* *
778695 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACGTCATGTGTGCACACCCCCCC
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCC
* * * *
778760 TGGCCCCCCCGATCGTCGGAACCCCAATGCAGCCGGTCAGGTTCTCCGGTGATGCTCCGGCGATG
195 -GGCCCCCCCGATCGTCGAAACCCCAAT---GCCGCTCA-G---TCAGGT--T-CTCCGACGATG
* ** * * *
778825 GTGCCCCGACGAAGAAAAATGCGACACCAGCACATGCCTGAGCCCAGCATGTGCTGTCGCAACCC
249 GTGCCTCGGTGAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAA-CC
*
778890 TCGGTCTGGTCCGATCTTAGACTGGGAATGAACTTCGTATTCTTAGACTAGGAATGAACTCCATA
313 -C--TC--G---G-TC-----C--GG--T---C--CG-A-TCTTAGACTGGGAATGAACTCCATA
* * ** * *
778955 TGCCTAAGTCAACGCATGAAACGAGCGTGCGGGCGCTCAGCC-AACTAGAGGGACGGGATGCGCA
353 TGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAAGGG-CGGGATGCGCA
* * * * * * * * *
779019 AGCCGGGGATCGCCCGGGTCCCCTTCTACGTGCTATCGACCCTGGTACTGTAACCCTTCG-TCCG
417 AGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCGCAACCCTT-GATTCG
* * * *
779083 GTCTGATCTTAGGCTGGGAATGAACTCTGTATGACTAAGCCAACCGACGAAAGGAGTGGACGGGC
481 GTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGA---G-CGGGC
* * * *
779148 GGGCAGGCAGGCACAACGCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
542 GGG--TG--GGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTA
* * ** *
779213 GGTGAGTTTAGGCACATCCTCATATTTCTATGTGCCAATGCCATTTTTTTGGCTTGTAAATTCAT
603 GGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCAT
* * * **
779278 ACAATGGTCCCCTAAGCCTTCATGTGAAGTTTCATGGCAAGGCGACTCGTTTTCTATTTTTCACA
668 ACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATG
** * * *
779343 ATTTTTGAAACTTTTTGCAGTTCGAGATTTTTTAAAATTTTTT-GAAAGGAGTTTTGGCCCCAAA
733 ATTTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAA
* * * * *
779407 CTTGGTAGACGTGATACTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTGAAAACTCG
798 TTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTTG
*
779469 AAGTGCACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
1 AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
* *
779534 GGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCAAGGTTTGATGAGG
66 GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
* * *
779599 GATAGGGGGCCAATATAAGGGCCAAGTAGCAGCA-CCATTTGCACATCATATGCGCACACCCCCC
131 GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA-TCGCACATCATGTGCGCACACCCCCC
* * * * * * *
779663 GG-CCCCCCGATCG-CTGGAACCCAAATGCCAC-CGGTCAGGTTCTTCGACGATGCT--CT-GGC
195 GGCCCCCCCGATCGTC-GAAACCCCAATGCCGCTCAGTCAGGTTCTCCGACGATGGTGCCTCGGT
* * * * *
779722 GAAGAGAAATGCGGCACTATCACATGCCCGAGCCTAGCATATGCTGCCGCAACCCTCGGTCCGGT
259 GAAGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGT
*
779787 CTGATCTTAGACTGGGAATGAACTCCGTATGCTTAGGCTGGGAATGAACTCCGTATGCCTACGTC
324 CCGATCTTAGACTGGGAATGAACT-C-----C--A---T----ATG----CC-TA-----A-GTC
* * * *
779852 AACCCACGAAACGAGCGTGTGGGCGCTCAGTCGGCC-AAAGGAGCGGGATGCACAAGCCGGGGTT
363 AACCCACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAAAAGG-GCGGGATGCGCAAGCCGGGGAT
* * * * * * * *
779916 CGACCGGGTCCCCCTCTTCATGCTGCCAATCCTACTGTCGCAA-CCTTCAGTCTGGTCTGATCTT
427 CGACCGGGTCCCCCTCTACGTGCTGTCGATCCTGCTGCCGCAACCCTTGATTC-GGTCTGATCTT
* * *
779980 AGACAGGGAATGAACTCTGTATGCCTAA-CCAACCGACGAAACAAGCGGGCGGGTGGGCGAGCGG
491 AGACTGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGT--------GG
* *
780044 GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCTGTGGATCGATAGGGTGGTAGGTGCGTTTA
548 GCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTA
*
780109 GGCACATCTTCATATTTCTACGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
613 GGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCC
*
780174 CTTAAGCCTTCACGTGAAGTTACATGGCAAG
678 CTTAAGCCTTCACGTGAAGTTTCATGGCAAG
780205 CCTTTACAAG
Statistics
Matches: 6000, Mismatches: 685, Indels: 450
0.84 0.10 0.06
Matches are distributed among these distances:
859 378 0.06
860 594 0.10
861 363 0.06
862 87 0.01
863 4 0.00
864 24 0.00
865 86 0.01
866 12 0.00
867 28 0.00
868 29 0.00
869 10 0.00
870 91 0.02
871 177 0.03
872 132 0.02
873 67 0.01
874 19 0.00
875 533 0.09
876 42 0.01
877 222 0.04
878 232 0.04
879 25 0.00
880 4 0.00
881 4 0.00
882 10 0.00
883 5 0.00
884 1 0.00
885 3 0.00
886 174 0.03
887 173 0.03
888 100 0.02
889 60 0.01
890 22 0.00
891 3 0.00
892 6 0.00
893 195 0.03
894 8 0.00
895 4 0.00
896 186 0.03
897 102 0.02
898 7 0.00
899 9 0.00
900 6 0.00
901 252 0.04
902 174 0.03
903 214 0.04
904 514 0.09
905 245 0.04
906 7 0.00
907 8 0.00
908 317 0.05
909 4 0.00
910 2 0.00
911 1 0.00
912 1 0.00
913 1 0.00
915 1 0.00
917 1 0.00
918 2 0.00
919 19 0.00
ACGTcount: A:0.25, C:0.24, G:0.25, T:0.26
Consensus pattern (859 bp):
AAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACT
GGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGG
GATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCG
GCCCCCCCGATCGTCGAAACCCCAATGCCGCTCAGTCAGGTTCTCCGACGATGGTGCCTCGGTGA
AGAAAAATGCGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCCGGTCC
GATCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCCACGAAACGAGCGTGCGGGCGCTC
AGCCGGCCAAAAGGGCGGGATGCGCAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTGTCGA
TCCTGCTGCCGCAACCCTTGATTCGGTCTGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGC
CAACCGACGAAACGAGCGGGCGGGTGGGCACTACGTCGGCCAGAGAGACGGGATGCGCAAGCCGT
GGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCGTGCCAATGCCATTTTT
ATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGACTC
GTTTTCTATTTTTCATGATTTTCAAAACTTTTTGCGGTTTGAGATTTTTTAAAATTTTTTCGGAA
GGAGTTTTGGCCCCAAATTTAGTAGACGTGATCCTTGTATTTTTGTTGGCATGCACAAAAAAATT
CAGCTAAAAACTTG
Found at i:775383 original size:26 final size:26
Alignment explanation
Indices: 775345--775397 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
775335 CCAGTTCGAT
*
775345 CTTAGACTTGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
775371 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
775397 C
1 C
775398 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.21, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:776282 original size:26 final size:26
Alignment explanation
Indices: 776253--776305 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
776243 CCGGTCCGAT
776253 CTTAGACTAGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
*
776279 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTAGGAATGAACTCCGTATG
776305 C
1 C
776306 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTAGGAATGAACTCCGTATG
Found at i:778050 original size:26 final size:26
Alignment explanation
Indices: 778012--778067 Score: 94
Period size: 26 Copynumber: 2.2 Consensus size: 26
778002 CCAGTCCAAT
*
778012 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTCGGAATGAACTCCGTATG
*
778038 CTTAGACTCGGAATGAACTCTGTATG
1 CTTAGACTCGGAATGAACTCCGTATG
778064 CTTA
1 CTTA
778068 AGTCAACCCA
Statistics
Matches: 28, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 28 1.00
ACGTcount: A:0.27, C:0.20, G:0.23, T:0.30
Consensus pattern (26 bp):
CTTAGACTCGGAATGAACTCCGTATG
Found at i:779821 original size:26 final size:26
Alignment explanation
Indices: 779792--779844 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
779782 CCGGTCTGAT
779792 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
779818 CTTAGGCTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
779844 C
1 C
779845 CTACGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:780569 original size:26 final size:26
Alignment explanation
Indices: 780540--780592 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
780530 CCGGACCGAT
*
780540 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
*
780566 CTTAGACTGGGAATAAACTTCGTATG
1 CTTAGACTGGGAATAAACTCCGTATG
780592 C
1 C
780593 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATAAACTCCGTATG
Found at i:781471 original size:26 final size:26
Alignment explanation
Indices: 781435--781487 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
781425 CCGGACCTAT
781435 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
781461 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
781487 C
1 C
781488 CTAAGTCAAA
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.25, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:782369 original size:26 final size:26
Alignment explanation
Indices: 782331--782409 Score: 140
Period size: 26 Copynumber: 3.0 Consensus size: 26
782321 CCGGTCCGAT
* *
782331 CTTAGACTAGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
782357 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
782383 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
782409 C
1 C
782410 CTAAGTTAAA
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:783286 original size:26 final size:26
Alignment explanation
Indices: 783257--783309 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
783247 CCGGTCCGAT
*
783257 CTTAGACTGGGAATTAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
783283 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
783309 C
1 C
783310 CTAAGTCCAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.21, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:784582 original size:873 final size:873
Alignment explanation
Indices: 782383--785746 Score: 4226
Period size: 873 Copynumber: 3.8 Consensus size: 873
782373 ACTCCGTATG
* * **
782383 CTTAGACTGGGAATGAACTCCGTATGCCTAAGTTAAAACACGAAACGAGTGTGCGGGCGCTCA-A
1 CTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAATCCACGAAACGAGTGTGCGGGCGCTCAGA
* * * * * *
782447 CCGGCCAGAAGAGCGGGATGC-GAAGCCGAGGATCAGCCGGGTCCCCCTTTGCGTGCTACCAATC
66 -CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGGCCGGGTCCCCCTCTACGTGCTACCAATC
** * * * *
782511 CTGTTGCCATAACCCTCAGTTC-GGTC-CGATCTTACACTGGGAATGAACGT-CGTATGCCTAAG
130 CTGCAGCCACAACCCTCAGTTCTAGTCTAGATCTTAGACTGGGAATGAAC-TCCGTATGCCTAAG
* * * * *
782573 CCAACTGACGAAACGAGCGGGCAGGCGGGCGAGCGGGCACTACACCGGCCAGAGGGACGGGATGC
194 CCAACCGACGAAACGAGCGGGCGGGCGGGCGA----GCACTACGCCGACCAGAGAGACGGGATGC
* ** *
782638 GTAA-CCTGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTGTGACAA
255 GCAAGCC-GTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAA
*
782702 TGCCATTTTTATGGCTTGTAAATTCGTACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
319 TGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGC
* * *
782767 AAGACGACTCGTTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTTGAGATTTTTTAAAAT
384 AAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTAAAAT
* * * * *
782832 TTTTTTGGTAGAATTTTTGGCCCCAAACTTGGTAGACATGATCCTTGTATTTTTATTGGCATGCA
449 TTTTTCGGAAGGATTTTTGGCCCCAAACTTCGTAGACATGATCCTTGTATTTTTGTTGGCATGCA
* *
782897 CAAAAAAATTCAACTAAAAACTCGAAGTATACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
514 CAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCC
**
782962 ATTTTGGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
579 ATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGT
783027 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
644 GTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCG
* * *
783092 TACATCATGTGTG--CACCCCCCGGCCCTCCCGATCGTCGGAACCCCAATGCCGCCGGTCAGGTT
709 CACATCATGTGCGCACACCCCCCGGCCC-CCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTT
* * * * * *
783155 CTACGGCGATGCTCCGGCGATGGTGCCCTGGTGAAGAAAAATGCGGCACCAGCACTTGTCCGAGC
773 CTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGGCCGAGC
*
783220 CCAGCATGTGCTGCCGTAACCCTCGGTCCGGTCCGAT
838 CCAGCATGTGCTG-CGTAACCCTCGGTCCGGTCCAAT
* *
783257 CTTAGACTGGGAATTAACTCCGTATGCTTAGACTGGGAATGAACTCCGTATGCCTAAGTCCACCC
1 CTTAGACTGAGAATGAACTCCGTATGC-----C------T-AA----G--T--C-AA-TCCA--C
* * * *
783322 ATGAAACGAGTGTGCGGGCGCTCCG-CTGGCCAGAGGGGCGGGATGCACAAGTCGAGGATTGGTC
42 --GAAACGAGTGTGCGGGCGCTCAGAC-GGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGGCC
* * * * * *
783386 AGATCCCCCTCT--GTG----------TGCTGCCGCAACCCTCAGTCCTA-TCT-CATCTTAGAC
104 GGGTCCCCCTCTACGTGCTACCAATCCTGCAGCCACAACCCTCAGTTCTAGTCTAGATCTTAGAC
* * * *
783437 TGGGAATGAACTCCGTATGCCTAAGCCAACCGATGAAATGAGGGGGCGGGCGGGCGGGCACTACG
169 TGGGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGGCGGGCGGGCGAGCACTACG
* *
783502 CCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGTTGGTAGGTGGGTTTAGGCACATC
234 CCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATC
* * *
783567 CTCATATTTCTGCACGCCAATGCCATTTTTATGGCTTGTAAATTCATACTATGGTCCCTTAAGCC
299 TTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCC
* *
783632 TTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAACTTTTTAC
364 TTCACGTGAAGTTTCATGGCAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTAC
* * * * *
783697 GATTCA-GGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACATCATAGACATGATCC
429 GGTT-AGGGATTTTTTAAAATTTTTTCGGAAGGATTTTTGGCCCCAAACTTCGTAGACATGATCC
*
783761 TTGTATTTTTGTTGGCATGCTCAAAAAAATTCAGCTAAAAACTC-ACAGTGTACAAGATTTTGTG
493 TTGTATTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGA-AGTGTACAAGATTTTGTG
* * *
783825 ACCATTTGAAAATAGTGTCCCCGTTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAAT
557 ACCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAAT
* * * *
783890 CTCAAATCCTTTTTAAGGGGGTGTGAGTTTTCGAGGTTTGATGAAGGATAGGGGGCCAATATAAG
622 CTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAG
*
783955 GGCCAAGTACCAGCACCCATCCCACATCATGTGCGCACACCCACCCGGCCCCCCGATCATCGGAA
687 GGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCC-CCCGGCCCCCCGATCATCGGAA
* * * * *
784020 CCCCAATGCCGTCGATCAGGTTCTCCGGTGATGCTCCGAAGATGGTGCCCCGGGGAAGAAAAATG
751 CCCCAATGCCGCCGGTCAGGTTCTCCGGCGATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATG
*
784085 CGGCACCAGCACATGGCCGAGCCCAGCATGTGCTGCAGCAACCCTCGGTCCGGTCCAAT
816 CGGCACCAGCACATGGCCGAGCCCAGCATGTGCTGC-GTAACCCTCGGTCCGGTCCAAT
* *
784144 CTTAGACTGAGAATGAACTTCGTATGCCTAAGTCAATCCACGAAACAAGTGTGCGGGCGCTCAGA
1 CTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAATCCACGAAACGAGTGTGCGGGCGCTCAGA
* * * * * * * *
784209 CGGCCAGAGGGGTGAGATGCGCAAGCCGGGGATCGGTCGGGTCCCTCTCTACATGCTGCCAATCC
66 CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGGCCGGGTCCCCCTCTACGTGCTACCAATCC
*
784274 TGCAGCCACAAACCTCAGTTC-AGT-TAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
131 TGCAGCCACAACCCTCAGTTCTAGTCTAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
* *
784337 AACGGACGAAACGAGCGGGCGGGCGGGCGAGCACTACGCCGACTAGAGAGACGGGATGCGCAAGC
196 AACCGACGAAACGAGCGGGCGGGCGGGCGAGCACTACGCCGACCAGAGAGACGGGATGCGCAAGC
* * * *
784402 CATTGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGTATGCCAATGCCGTT
261 CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
** *
784467 TTTACAGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCATGTGAAGTTTCATGGCAAGACGA
326 TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
784532 CTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTTCG
391 CTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTTCG
* ** * *
784597 GAAGGATTTTTGTCCTGAAACTTCGTAGACATGATCCTTGTACTCTTT-TTGGCATGCACGAAAA
456 GAAGGATTTTTGGCCCCAAACTTCGTAGACATGATCCTTGTA-TTTTTGTTGGCATGCACAAAAA
* *
784661 AATTCAGCTAAAAACTCAAAGTGAACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
520 AATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCA
* *
784726 GACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGGGTGAGT
585 GACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGT
* *
784791 TCTTGAGGTTTGATGAGGGAT-GGGGGCCAATATAAGGGCCAAGTACTAGCACCCATCGCACATC
650 TCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATC
* *
784855 ATGTGCGCACACCCCCCGGCCCCCCGATCACCGGAACCCCAATGCTGCCGGTCAGGTTCTCCGGC
715 ATGTGCGCACACCCCCCGGCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGC
* *
784920 GATGCTCCGACGATGGTGCCCCGACGAAGAAAAATGCGGCACCAGCACAT-GCTCGAGCCCAACA
780 GATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGGC-CGAGCCCAGCA
*
784984 TGTGCTGTCGTAACCTTCAGTCTGATTCGATCCTAGCTGGGAATGAACTCCGTAT
844 TGTGCTG-CGTAACC--C--TC-G----G-T-C---C---G---G---TCC-AAT
* * * *
785039 GCTTAGACT-AGGAATGAACTCCGTATGCCTAAGTCAACCCATGAAACGAGCGAGCGGGCGCTCA
1 -CTTAGACTGA-GAATGAACTCCGTATGCCTAAGTCAATCCACGAAACGAGTGTGCGGGCGCTCA
* * * * *
785103 GCCGGCCAGAGGGGTGGGATGCACAAGCCGGGGATCGACCGGGTCCCCCTCTACGTGCTACCGAT
64 GACGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGGCCGGGTCCCCCTCTACGTGCTACCAAT
* * * * * * * * * * *
785168 CCTACTA-TCGCAACCCTCAG-TCTGGTCTA-AACTTAAACTCGGATTGAACTCTGTATGCTTGA
129 CCTGC-AGCCACAACCCTCAGTTCTAGTCTAGATCTTAGACTGGGAATGAACTCCGTATGCCTAA
* * * *
785230 GCCAACCGATGAAATGAACGAGCGGGCGGGCGGGCGGGCACTATG-CAAGCCAGAGAGACGGGAT
193 GCCAACCGACG--A--AACGAGCGGGCGGGCGGGCGAGCACTACGCCGA-CCAGAGAGACGGGAT
*
785294 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTTTGCATGCCA
253 GCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCA
* * *
785359 ATGCCATTTTTATGGCTTGTAAATTCATACTATGGTCCCTTAAGCCTTCACGTGAGGTTCCATGG
318 ATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGG
* ** * * * *
785424 CAAGACGACCCATTTTCTATTTTTCACGATTTTTGAAACTCTTTGCGGTTCGGGATTTTTTGAAA
383 CAAGACGACTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTAAAA
** * *
785489 TTTTTTCGGAAGGATTTTTGGCCCCAAACTT-GTTAGATGTGATCCTTGCATTTTTGGTGGCATG
448 TTTTTTCGGAAGGATTTTTGGCCCCAAACTTCG-TAGACATGATCCTTGTATTTTTGTTGGCATG
* * *
785553 CAAAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAATGTGTCA
512 CACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCC
* *
785618 CCATTTCAGACACTTTAATTGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGAG
577 CCATTTCAGACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGG
* * *
785683 GTGTGAGTTCTCGAGGTATGAGGAGGGATAAGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
642 GTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCA
785747 CGGTCCGGTT
Statistics
Matches: 2167, Mismatches: 227, Indels: 165
0.85 0.09 0.06
Matches are distributed among these distances:
861 61 0.03
862 1 0.00
863 3 0.00
865 4 0.00
866 2 0.00
867 1 0.00
869 1 0.00
870 2 0.00
871 116 0.05
872 59 0.03
873 481 0.22
874 31 0.01
875 4 0.00
876 2 0.00
879 1 0.00
880 1 0.00
881 1 0.00
882 2 0.00
884 1 0.00
885 453 0.21
886 5 0.00
887 152 0.07
888 10 0.00
889 76 0.04
890 1 0.00
891 1 0.00
892 1 0.00
894 3 0.00
895 7 0.00
896 164 0.08
897 3 0.00
898 2 0.00
899 11 0.01
900 451 0.21
901 53 0.02
ACGTcount: A:0.26, C:0.24, G:0.25, T:0.26
Consensus pattern (873 bp):
CTTAGACTGAGAATGAACTCCGTATGCCTAAGTCAATCCACGAAACGAGTGTGCGGGCGCTCAGA
CGGCCAGAGGGGCGGGATGCACAAGCCGAGGATCGGCCGGGTCCCCCTCTACGTGCTACCAATCC
TGCAGCCACAACCCTCAGTTCTAGTCTAGATCTTAGACTGGGAATGAACTCCGTATGCCTAAGCC
AACCGACGAAACGAGCGGGCGGGCGGGCGAGCACTACGCCGACCAGAGAGACGGGATGCGCAAGC
CGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCTTCATATTTCTGCATGCCAATGCCATT
TTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCTTCACGTGAAGTTTCATGGCAAGACGA
CTCATTTTCTATTTTTCACGATTTTCAAAACTTTTTACGGTTAGGGATTTTTTAAAATTTTTTCG
GAAGGATTTTTGGCCCCAAACTTCGTAGACATGATCCTTGTATTTTTGTTGGCATGCACAAAAAA
ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCATTTGAAAAAAGTGTCCCCATTTCAG
ACACTTTAATGGCTACTGGCAACAAACCTGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTT
CTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCAAGTACCAGCACCCATCGCACATCA
TGTGCGCACACCCCCCGGCCCCCCGATCATCGGAACCCCAATGCCGCCGGTCAGGTTCTCCGGCG
ATGCTCCGACGATGGTGCCCCGGCGAAGAAAAATGCGGCACCAGCACATGGCCGAGCCCAGCATG
TGCTGCGTAACCCTCGGTCCGGTCCAAT
Found at i:785812 original size:26 final size:26
Alignment explanation
Indices: 785761--785813 Score: 79
Period size: 26 Copynumber: 2.0 Consensus size: 26
785751 CCGGTTCGAT
*
785761 CTTAAACTGGGAATGAACTCTATATG
1 CTTAAACTGGGAATGAACTCCATATG
* *
785787 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAAACTGGGAATGAACTCCATATG
785813 C
1 C
785814 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 3, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.30, C:0.19, G:0.23, T:0.28
Consensus pattern (26 bp):
CTTAAACTGGGAATGAACTCCATATG
Found at i:788494 original size:20 final size:20
Alignment explanation
Indices: 788469--788507 Score: 60
Period size: 20 Copynumber: 1.9 Consensus size: 20
788459 AGTCCGATCT
*
788469 TAGACTGAGATTGAACTCCA
1 TAGACTGAGAATGAACTCCA
*
788489 TAGACTGGGAATGAACTCC
1 TAGACTGAGAATGAACTCC
788508 GTATGCCTAA
Statistics
Matches: 17, Mismatches: 2, Indels: 0
0.89 0.11 0.00
Matches are distributed among these distances:
20 17 1.00
ACGTcount: A:0.33, C:0.21, G:0.23, T:0.23
Consensus pattern (20 bp):
TAGACTGAGAATGAACTCCA
Found at i:788710 original size:12 final size:12
Alignment explanation
Indices: 788693--788723 Score: 53
Period size: 12 Copynumber: 2.6 Consensus size: 12
788683 AACGAAACGA
788693 GCGGGCAGGCAG
1 GCGGGCAGGCAG
*
788705 GCGGGCAGGCGG
1 GCGGGCAGGCAG
788717 GCGGGCA
1 GCGGGCA
788724 CTACGTCGAG
Statistics
Matches: 18, Mismatches: 1, Indels: 0
0.95 0.05 0.00
Matches are distributed among these distances:
12 18 1.00
ACGTcount: A:0.13, C:0.26, G:0.61, T:0.00
Consensus pattern (12 bp):
GCGGGCAGGCAG
Found at i:789399 original size:26 final size:26
Alignment explanation
Indices: 789370--789422 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
789360 CTGGTCCAAT
*
789370 CTTAGACTGGGAATGAACTCTGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
789396 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
789422 C
1 C
789423 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.19, G:0.26, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:790180 original size:11 final size:11
Alignment explanation
Indices: 790164--790192 Score: 58
Period size: 11 Copynumber: 2.6 Consensus size: 11
790154 CAGGTTCTCT
790164 GGCGATGCTCC
1 GGCGATGCTCC
790175 GGCGATGCTCC
1 GGCGATGCTCC
790186 GGCGATG
1 GGCGATG
790193 GTGCCCCGGT
Statistics
Matches: 18, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
11 18 1.00
ACGTcount: A:0.10, C:0.31, G:0.41, T:0.17
Consensus pattern (11 bp):
GGCGATGCTCC
Found at i:790302 original size:26 final size:26
Alignment explanation
Indices: 790273--790325 Score: 81
Period size: 26 Copynumber: 2.0 Consensus size: 26
790263 CCAGTCTAAT
790273 CTTAGACTGGGAATG-AACTCCATATG
1 CTTAGACTGGGAA-GCAACTCCATATG
*
790299 CTTAGACTGGGAAGCAACTCCGTATG
1 CTTAGACTGGGAAGCAACTCCATATG
790325 C
1 C
790326 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 1, Indels: 2
0.89 0.04 0.07
Matches are distributed among these distances:
25 1 0.04
26 24 0.96
ACGTcount: A:0.28, C:0.23, G:0.25, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAAGCAACTCCATATG
Found at i:791205 original size:26 final size:26
Alignment explanation
Indices: 791176--791228 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
791166 CCGGTCCAAT
*
791176 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
791202 CTTAGACTGGGAATGAACACCGTATG
1 CTTAGACTGGGAATGAACACCGTATG
791228 C
1 C
791229 CTAAGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.21, G:0.26, T:0.25
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACACCGTATG
Found at i:792118 original size:26 final size:26
Alignment explanation
Indices: 792082--792134 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
792072 CTGGTCGGAT
792082 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
*
792108 CTTAGACTGGGAGTGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCGTATG
792134 C
1 C
792135 CTAGGTCAAC
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.25, C:0.21, G:0.28, T:0.26
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCGTATG
Found at i:794545 original size:26 final size:26
Alignment explanation
Indices: 794509--794561 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
794499 CCGGTCCGAT
*
794509 CTTAGATTGGGAATGAACTCCATATG
1 CTTAGACTGGGAATGAACTCCATATG
*
794535 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACTGGGAATGAACTCCATATG
794561 C
1 C
794562 CTAGGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.19, G:0.25, T:0.28
Consensus pattern (26 bp):
CTTAGACTGGGAATGAACTCCATATG
Found at i:795010 original size:26 final size:25
Alignment explanation
Indices: 794981--795059 Score: 122
Period size: 26 Copynumber: 3.0 Consensus size: 25
794971 CCCGTCAAAT
794981 CTTAGACTGTGAATGAACTCCGTATG
1 CTTAGACTG-GAATGAACTCCGTATG
795007 CTTAGACTGGGAATGAACTCCGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
*
795033 CTTAGACTAGGAATGAACTTCGTATG
1 CTTAGACT-GGAATGAACTCCGTATG
795059 C
1 C
795060 CTAAGTCAAC
Statistics
Matches: 50, Mismatches: 2, Indels: 2
0.93 0.04 0.04
Matches are distributed among these distances:
26 49 0.98
27 1 0.02
ACGTcount: A:0.28, C:0.19, G:0.24, T:0.29
Consensus pattern (25 bp):
CTTAGACTGGAATGAACTCCGTATG
Found at i:795943 original size:26 final size:26
Alignment explanation
Indices: 795903--795955 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
795893 CTGGTCTGAT
*
795903 CTTAGACTGGAAATGAACTTCTTATG
1 CTTAGACTGGAAATGAACTTCGTATG
*
795929 CTTAGACTGGGAATGAACTTCGTATG
1 CTTAGACTGGAAATGAACTTCGTATG
795955 C
1 C
795956 CTAATTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.17, G:0.23, T:0.32
Consensus pattern (26 bp):
CTTAGACTGGAAATGAACTTCGTATG
Found at i:796860 original size:25 final size:26
Alignment explanation
Indices: 796808--796860 Score: 81
Period size: 26 Copynumber: 2.1 Consensus size: 26
796798 GGTCCAATCT
*
796808 TAGACTGGGAATGAACTCCGTATGCC
1 TAGACTGGGAATGAACTCCGTATACC
*
796834 TAGACTTGGAATGAACT-CGTATACC
1 TAGACTGGGAATGAACTCCGTATACC
796859 TA
1 TA
796861 AGTCAACCCA
Statistics
Matches: 25, Mismatches: 2, Indels: 1
0.89 0.07 0.04
Matches are distributed among these distances:
25 9 0.36
26 16 0.64
ACGTcount: A:0.30, C:0.21, G:0.23, T:0.26
Consensus pattern (26 bp):
TAGACTGGGAATGAACTCCGTATACC
Found at i:796993 original size:901 final size:897
Alignment explanation
Indices: 795007--800002 Score: 6213
Period size: 901 Copynumber: 5.6 Consensus size: 897
794997 ACTCCGTATG
*
795007 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTAGGAATGAACTTCGTATGCCTAAGTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* * * * *
795072 CCGAAACGAGCGTGCGGGCGCTCAACCGGCCAGAGGGGCGGGCTGCACAAGCCGGGGATCGATCG
66 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * * * * *
795137 GGTCCCCTCTGCGTGTTGTCGATCCTGCTGCTGTAACCCTTGATCCGGTTTGATCTTAGACTTGG
131 GGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* *
795202 AATGAACTCTGTATGCCTAAG-CAACCGACGAAACGAGTGGACGGGC--G-GGCGGGCACTACGC
196 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGCGGGCACTACGC
* *
795263 CGGCCAGGGAGACGGGATGCGCAAGCCGTGTATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
261 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
**
795328 TCATATTTCTGCATGCCAATGTAATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
326 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * *
795393 TCACGAGAAGTTTCATGGCAAGACAACTCGTTCTT-TATTTTTCACGATTTTTGAAACTTTTTAC
391 TCACGTGAAGTTTCATGGCAAGACGACTC-TTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
* * * * * * *
795457 GGTTCGAGATTTTTTAAAATTTTTTCGAAAGAATTTTTTGCCCCAAACTTGGTAGACGTGATCCC
455 GATTCGGGATTTTTTAAAATTTTTTCG-AAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCT
795522 TGTATTTTTTGTTGGCATGCACAAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
519 TGTA-TTTTTGTTGGCATGCAC-AAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * **
795587 CCATTTG-AAAAAGTTTCCCCATTTCACACACTTTAATAACTACTGGCAGCAAACCTGTAAAATC
582 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
* *
795651 TCAAATGCTCTTTAAGGGGGTATGAGTTCTCGAGGTTTGATGAGGGATAGGTGGCCAATATAAGG
647 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
* * * ** * *
795716 GTCAAGTACCAGCACCCATCGCACATCGTGTGCGCACACCCCCCGACCCCCCGATCACCGGAGCA
712 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACC
* ** * * *
795781 CCAATGTCGTTGATCAGGTTCTCCGATGATGCTCCGGCGATGGTGCCCCGACGAAGAAAAATGCG
777 CCAATGCCGCAGGTCAGGTTCTCCGA-GATGCTCCGGAGATGGTGCCCCGACGAAGAAAAATGTG
* * * * *
795846 GCACCAACAGATGCCCGAGCCTAGCATGTGCGGCCGTAACCCTCGGTCTGGTCTGAT
841 GCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * * *
795903 CTTAGACTGGAAATGAACTTCTTATGCTTAGACTGGGAATGAACTTCGTATGCCTAATTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* * ** * * * * *
795968 ACGAAACAAGCATAAGGGCGCTCAGCCGACCAGAGGGGCGGGATACGTAAGCCGGGAATCGATCG
66 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * * * **
796033 GGTCCCTCTCTGCGTGCTGTCGATCCTGCTACCATAACCCTTGGTCCAGTCCAATCTTAGACTGG
131 GGTCCC-CTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGG
* * *
796098 GAATGAACTCCGTATGCCTAAGCCAACCAACGAAACGAGCGGGCGGGTGGGCGAGCGGGCACTAC
195 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCG-GCGGGCACTAC
* *
796163 GCCGACCAGAGAGACGGGATGCGCAAGCCGTGGATCAATAGGGTGGTAGGTGGGTTTAGGCACAT
259 GCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACAT
* * * * *
796228 CTTCATATTTTTGCCTACCAATGCCATTTTTATGG-TTGTAAATTCATACAATTGTCCCTTAATC
324 CTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGC
* * *
796292 CTTCACCTGAAGTTTCACGGCAAGACGACTCTTTTTCTATTTTTCACCATTTTTGAAACTTTTTA
389 CTTCACGTGAAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCACGATTTTTGAAACTTTTTA
*
796357 CGATTCAGGATTTTTTAAAATTTTTTCAGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCC
454 CGATTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCC
*
796422 TTGTATTTTTGTTGGCATGCACAAAAATATTCAGCTAAAAACTCGAAGTGTACAAGATTTTATGA
518 TTGTATTTTTGTTGGCATGCACAAAAA-ATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGA
* * * * * *
796487 CCATTTGAAAAAAGCGTCCCCATTTTAGACGCTTTAATTGCCACTGGCAGCACACCTGTAAAATC
582 CCATTTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATC
796552 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
647 TCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGG
*
796617 GCCAAGTACCAGCACCCATCACACATCATGTGCGCACACCCCCCGGCCGCCCCCGATCGTCGGAA
712 GCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGG-C-CCCCCGATCGTCGGAA
* * *
796682 CCCCAATGCCACCGGTCAGGTTCTCCGGAGATGCTCTGGAGATGGTGCCCCGACGAAGAAAAATG
775 CCCCAATGCCGCAGGTCAGGTTCTCC-GAGATGCTCCGGAGATGGTGCCCCGACGAAGAAAAATG
* * * * **
796747 TGGCACCAGCACGTGCCCGAGCCCAGCATGTGCTGCCCCAACCCTTGGTCCGGTCCAAT
839 TGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * *
796806 CTTAGACTGGGAATGAACTCCGTATGCCTAGACTTGGAATGAAC-TCGTATACCTAAGTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* * ** * *
796870 ATGAAACGAGCGTGCGGGCGCTCAGCCGCCCAGAGGGGCGGGATGCGCAAATCGGGGATCGGCCA
66 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * * * *
796935 GGACCCCTCTACGTGCTGTTGATTCTACTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGG
131 GGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGG
* * * *
797000 AATGAACTCCGTATGCCTAAGCCAATCGACGAAAAGAG-TGAC-GG-GTG-GGCGGGCACTACGC
196 AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGCGGGCACTACGC
* **
797061 CGGCCAGAGAGACGGGATGCACAAGCCGTGGATCGATAGGGTGGTAGGTACGTTTAGGCACATCT
261 CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
* *
797126 TCATATTTCTACATGCCAATGCCTTTTTTATGGCTTGTAAATTCATACAATGGT-CCTTAAGCCT
326 TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
* * * *
797190 TCACGTGAAAGTTTCATGGCAAGATGACCCATTTTCTATTTTTCACAATTTTTGAAACTTTTTAC
391 TCACGTG-AAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCACGATTTTTGAAACTTTTTAC
* * * * *
797255 GGTTCGGGATTTTTTAAAA-TTTTTCAGAAGGAATTTTAGCCCTAAACTAGGTAGACATGATCCT
455 GATTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCT
* * *
797319 TGTATTTTTGTTGGCATGTACAAAAAGTTCAGCTAAAAACTCGAAGTGTACAAGATTTTGGGACC
519 TGTATTTTTGTTGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACC
* * * *
797384 ATTTTAAAAAAATTGTCCCCATTTTAGACACTTTAAATGGCTACTGGCACGAAAACCTGT-AAAT
584 A-TTTGAAAAAAGTGTCCCCATTTCAGACACTTT-AATGGCTACTGGCA-GCAAACCTGTAAAAT
* * ** *
797448 CTCAAATGCTCCTTTAAAGGGGTGTGAGTTCTCAAGGTTTGATGAGGGGATAGGGGGATATTATA
646 CTCAAATGCT-CTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGA-GGGATAGGGGGCCAATATA
* * *
797513 CAGGGCCAAGTACCAGTACCCATCGCACATCATGTGCGCATACCCCCCCGGCCCCCCGATCGCCG
709 -AGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACA-CCCCCCGGCCCCCCGATCGTCG
* * *
797578 GAACCCAAATGCCGCAGGTCAGGTTCTCCAACGATGCTCCGGCGATGGTGCCCCGACGAAGAAAA
772 GAACCCCAATGCCGCAGGTCAGGTTCTCCGA-GATGCTCCGGAGATGGTGCCCCGACGAAGAAAA
* * * * * * *
797643 ATGTGACACCAGCCCATGCCCGAGCCCAGTAAGTGCTACCGCAACCCTCGGTACTGATCCGAT
836 ATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGT-CTGGTCTGAT
* * *
797706 CTTAGACTCGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTCCATATGCCTAAGTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* ** * * * * * *
797771 ATGAAACGAGCGTGCGTTCGGTCAGCCAGCCAGAAGGGTGGGATGCGTAAGCCGGGGATCGATCG
66 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * * ** * * **
797836 GGTCCCCCTCTGTGTGCT-ACTGGTCCTGCTATCATAACCCTCGATTTGGTCTGATCTTAGACTG
131 GGT-CCCCTCTGCGTGCTGTC-GATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTG
* * * * * * * * *
797900 GGAATGAACTCCATATGCCTAAGCCAACCGACAAAATGAACGGGCCGACGAGCGGGCGGGCATTA
194 GGAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGC-GGCGGGCACTA
* * * *
797965 CGCAGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGCTGGGATTAGGTACA
258 CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
* *
798030 TCTTCATATTTTTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAGTGGTCCCTTAAG
323 TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
* *
798095 CCTTCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCACGATTTTCGAAACTTTTT
388 CCTTCACGTGAAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCACGATTTTTGAAACTTTTT
* * *
798160 ACTATTCGGAATTTTTTAAAATTTTTTCGGAAGGAGTTTTGGCCCCAAACATGGTAGACATGATC
453 ACGATTCGGGATTTTTTAAAATTTTTTC-GAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATC
* *
798225 CTTGTATTTTTTTTGGCATGCAAAAAAAAATTCAGCTAAAAA-TCGAAGTGTACAAGATTTTGTG
517 CTTGTATTTTTGTTGGCATGC-ACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTG
* * *
798289 ACCATTTGAAAAAAAGT-T-GCCATTTCAGACATTTTAATGGCTACTTGCAGCAAACCTGTAAAA
581 ACCATTTG-AAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAA
* *
798352 TCTCAAATGCTCTTTAAGGGGCTGTGAGTTCTTGAGGTTTGATGAGGGATAGGGGGCCAATATAA
645 TCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAA
798417 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCTCGGCCCCCCTGATCGTCGG
710 GGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCC-CGGCCCCCC-GATCGTCGG
*
798482 AACCCCAATGCTGCAGGTCAGG-T-T-C----T--T-C------GGT--------GAAGAAAAAT
773 AACCCCAATGCCGCAGGTCAGGTTCTCCGAGATGCTCCGGAGATGGTGCCCCGACGAAGAAAAAT
* * ** * *
798523 GTGGCACCAGAACATGCCTGAGCCCAGCATGTGCTGCCATAACCCTCGGTCCGATCTGAT
838 GTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGAT
* * **
798583 CATAGACTGGGAATGAACTCCATATGCTTAGACTGGGAATGAAC-TCGTATGCCTAAGTCAAAGC
1 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* * * *
798647 ACGAAACGAGCGTGCAGGCGCTCAACCGGCTAGA-----GGGATGCGTAAGCCGGGGATCGACCG
66 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * ** * * * * * *
798707 AGTACCCCTCTGCATGCTGTCGATCCTATTGCTGTAACCCTTGGTTCGATCCGATCTTTGACTGG
131 GGT-CCCCTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGG
* * * * * *
798772 GAATGAACTCCGTATGGCTAAGCCAACTGACGAAATGAGCGGGCTGGACGGGCAGGTGGGCACTA
195 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGAC-GGGCGGGC-GGCGGGCACTA
** * * * * * *
798837 CATCGGCCAAAGAAATGGGATGCGTAAGCCGTGGATCGATAGAGTGGTAGGTGCGTTTAGGCACA
258 CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACA
** * *
798902 TCTTCATATTTCTGTGTGCCAATGCCTTTTTTATGGCTTGTAAATTCATATAATGGTCCCTTAAG
323 TCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAG
*
798967 CCTTCACGTGAAGTTTCATGGCAAGACGACT-TATTTTCTATTTTTCACGATTTTAGAAACTTTT
388 CCTTCACGTGAAGTTTCATGGCAAGACGACTCT-TTTTCTATTTTTCACGATTTTTGAAAC-TTT
* * *
799031 TTAAC-AGTTTGGGATTTTTTAAAATTTTTTCGAAAGGATTTTTGGCCCCAAACTTGGTAGACGT
451 TT-ACGA-TTCGGGATTTTTTAAAATTTTTTCG-AAGGAGTTTTGGCCCCAAACTTGGTAGACAT
*
799095 GATCCTTGTCTTTTTGTTGGCATGCCACACAAAAATTCAGCT-AAAACTCGAAGTGTTACAAGAT
513 GATCCTTGTATTTTTGTTGGCATG-CACA-AAAAATTCAGCTAAAAACTCGAAGTG-TACAAGAT
* * *
799159 TTTATGACCATTTGAAAAAAGTGTCCCCCATTTCAGACACTTTTAATGGCTACTAGCAGTAAA-C
575 TTTGTGACCATTTGAAAAAAGTGT-CCCCATTTCAGACAC-TTTAATGGCTACTGGCAGCAAACC
*
799223 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTTGAGGTTTGATGAGGGATA-GGGGCC
638 TGTAAAATCTCAAATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCC
* * * *
799287 -ATATAAAGGCC-AGCACCAGCACCCATCACACATCATGTGCGCACA-CCCCTGGCCCCCCGATC
703 AATATAAGGGCCAAGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATC
* * *
799349 ATCGGAACCCCAATG-CGTC-GGTCAGGTTTCTCCGGCGATGCTTTC-GACGATGGTGCCCCGAC
768 GTCGGAACCCCAATGCCG-CAGGTCAGG-TTCTCC-GAGATGC-TCCGGA-GATGGTGCCCCGAC
* * * * * *
799411 GAAGAAAAATGCGGC-CCAGCACATGCCCTAGCCCAGTATGTGCTGTCGCAACCATCTGTCTGGT
828 GAAGAAAAATGTGGCACCAGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGT
*
799475 CTAAT
893 CTGAT
* * *
799480 CTTAGACT-GGAATGAACTCTGTATGCTTACACTAGGAATGAACTTCGTATGCCTAAGTCAACCC
1 CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
* * * * * *
799544 ACGAAACGAGTGTGCGGGTGCTCAGTCGGCCAGAGGGGCGGGATACGCAAGCTGGGGATCGGCCG
66 ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
* * * * * * * * *
799609 GGTCCACCTCTACATGCTGTCAATCCTTCT-ACG-CA-CCTCAGTCCAGTCTGATGTTAGACTGG
131 GGTCC-CCTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGG
*
799671 GAATGAACTCCGTATGCCTAAGCCAACC-ACGAAAGGAGCGGACGGGCGGGCTGGCGGGCCACTA
195 GAATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGC-GGCGGG-CACTA
* * * *
799735 CGCCAGCCAGAGAGACGGGATGCCCAA-TCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGTTAC
258 CGCCGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGG-CAC
* * * *
799799 ATCTTGATATTTCTGCGTGCCAATGCCATTTTTATGGCTTGTAAATTCATGCAATGGTCTCTTAA
322 ATCTTCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAA
* * * ** *
799864 -ACTATCACGTGAAGTTTCATGGCAAGACGACTCGTTTTCTATTTTTCATGATTTTCAAAAATTT
387 GCCT-TCACGTGAAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCACGATTTTTGAAACTTT
* * * * * *
799928 TTGCGGTTCGGGAGTTTTTAAAATTTTTTTGGAAGGAGTTTTGTCCCCAAACTTAGTAGACATGA
451 TTACGATTCGGGATTTTTTAAAA-TTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGA
799993 TCCTTGTATT
515 TCCTTGTATT
800003 NNNNNNNNNN
Statistics
Matches: 3535, Mismatches: 470, Indels: 190
0.84 0.11 0.05
Matches are distributed among these distances:
871 117 0.03
872 204 0.06
873 16 0.00
874 85 0.02
875 62 0.02
876 74 0.02
877 55 0.02
878 121 0.03
879 20 0.01
880 1 0.00
883 1 0.00
884 1 0.00
886 3 0.00
890 3 0.00
892 1 0.00
893 1 0.00
895 38 0.01
896 414 0.12
897 335 0.09
898 227 0.06
899 181 0.05
900 156 0.04
901 467 0.13
902 352 0.10
903 199 0.06
904 42 0.01
905 29 0.01
906 14 0.00
907 193 0.05
908 105 0.03
909 18 0.01
ACGTcount: A:0.26, C:0.24, G:0.24, T:0.26
Consensus pattern (897 bp):
CTTAGACTGGGAATGAACTCCGTATGCTTAGACTGGGAATGAACTTCGTATGCCTAAGTCAACCC
ACGAAACGAGCGTGCGGGCGCTCAGCCGGCCAGAGGGGCGGGATGCGCAAGCCGGGGATCGACCG
GGTCCCCTCTGCGTGCTGTCGATCCTGCTGCCGTAACCCTCGGTCCGGTCTGATCTTAGACTGGG
AATGAACTCCGTATGCCTAAGCCAACCGACGAAACGAGCGGACGGGCGGGCGGCGGGCACTACGC
CGGCCAGAGAGACGGGATGCGCAAGCCGTGGATCGATAGGGTGGTAGGTGGGTTTAGGCACATCT
TCATATTTCTGCATGCCAATGCCATTTTTATGGCTTGTAAATTCATACAATGGTCCCTTAAGCCT
TCACGTGAAGTTTCATGGCAAGACGACTCTTTTTCTATTTTTCACGATTTTTGAAACTTTTTACG
ATTCGGGATTTTTTAAAATTTTTTCGAAGGAGTTTTGGCCCCAAACTTGGTAGACATGATCCTTG
TATTTTTGTTGGCATGCACAAAAAATTCAGCTAAAAACTCGAAGTGTACAAGATTTTGTGACCAT
TTGAAAAAAGTGTCCCCATTTCAGACACTTTAATGGCTACTGGCAGCAAACCTGTAAAATCTCAA
ATGCTCTTTAAGGGGGTGTGAGTTCTCGAGGTTTGATGAGGGATAGGGGGCCAATATAAGGGCCA
AGTACCAGCACCCATCGCACATCATGTGCGCACACCCCCCGGCCCCCCGATCGTCGGAACCCCAA
TGCCGCAGGTCAGGTTCTCCGAGATGCTCCGGAGATGGTGCCCCGACGAAGAAAAATGTGGCACC
AGCACATGCCCGAGCCCAGCATGTGCTGCCGCAACCCTCGGTCTGGTCTGAT
Found at i:797736 original size:26 final size:26
Alignment explanation
Indices: 797706--797758 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
797696 CTGATCCGAT
*
797706 CTTAGACTCGGAATGAACTCCGTATG
1 CTTAGACTCGGAATGAACTCCATATG
*
797732 CTTAGACTGGGAATGAACTCCATATG
1 CTTAGACTCGGAATGAACTCCATATG
797758 C
1 C
797759 CTAAGTCAAC
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.23, G:0.23, T:0.26
Consensus pattern (26 bp):
CTTAGACTCGGAATGAACTCCATATG
Found at i:799517 original size:26 final size:25
Alignment explanation
Indices: 799480--799531 Score: 70
Period size: 26 Copynumber: 2.0 Consensus size: 25
799470 CTGGTCTAAT
*
799480 CTTAGACTGGAATGAAC-TCTGTATG
1 CTTACACTGGAATGAACTTC-GTATG
799505 CTTACACTAGGAATGAACTTCGTATG
1 CTTACACT-GGAATGAACTTCGTATG
799531 C
1 C
799532 CTAAGTCAAC
Statistics
Matches: 24, Mismatches: 1, Indels: 3
0.86 0.04 0.11
Matches are distributed among these distances:
25 7 0.29
26 15 0.62
27 2 0.08
ACGTcount: A:0.29, C:0.19, G:0.21, T:0.31
Consensus pattern (25 bp):
CTTACACTGGAATGAACTTCGTATG
Found at i:804376 original size:26 final size:26
Alignment explanation
Indices: 804347--804396 Score: 100
Period size: 26 Copynumber: 1.9 Consensus size: 26
804337 GTTGACTTAG
804347 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
804373 GCATACGGAGTTCATTCCCAGTCT
1 GCATACGGAGTTCATTCCCAGTCT
804397 CAGATCGAAT
Statistics
Matches: 24, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.24, C:0.28, G:0.20, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:806031 original size:26 final size:26
Alignment explanation
Indices: 805994--806046 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
805984 GTTGACTTAG
*
805994 GCATACGGAGTTCATTCCCAGCCTAA
1 GCATACGCAGTTCATTCCCAGCCTAA
*
806020 GCATACGCAGTTCATTCCCAGTCTAA
1 GCATACGCAGTTCATTCCCAGCCTAA
806046 G
1 G
806047 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.26, C:0.30, G:0.19, T:0.25
Consensus pattern (26 bp):
GCATACGCAGTTCATTCCCAGCCTAA
Found at i:806930 original size:26 final size:26
Alignment explanation
Indices: 806894--806946 Score: 90
Period size: 26 Copynumber: 2.0 Consensus size: 26
806884 GTTGACTTAG
806894 GCATACGGAGTTCATTC-CTAGTCTAA
1 GCATACGGAGTTCATTCTC-AGTCTAA
806920 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCTCAGTCTAA
806946 G
1 G
806947 ATCAGATTGG
Statistics
Matches: 26, Mismatches: 0, Indels: 2
0.93 0.00 0.07
Matches are distributed among these distances:
26 25 0.96
27 1 0.04
ACGTcount: A:0.26, C:0.23, G:0.21, T:0.30
Consensus pattern (26 bp):
GCATACGGAGTTCATTCTCAGTCTAA
Found at i:808663 original size:26 final size:26
Alignment explanation
Indices: 808633--808685 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
808623 GTTAACTTAG
808633 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
808659 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
808685 G
1 G
808686 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:809578 original size:26 final size:26
Alignment explanation
Indices: 809542--809593 Score: 86
Period size: 26 Copynumber: 2.0 Consensus size: 26
809532 TTGACCTAGA
* *
809542 CATACGGAGTTCATTCCCAGTCTAAG
1 CATACAGAGTTAATTCCCAGTCTAAG
809568 CATACAGAGTTAATTCCCAGTCTAAG
1 CATACAGAGTTAATTCCCAGTCTAAG
809594 ATTCAGACCT
Statistics
Matches: 24, Mismatches: 2, Indels: 0
0.92 0.08 0.00
Matches are distributed among these distances:
26 24 1.00
ACGTcount: A:0.31, C:0.25, G:0.17, T:0.27
Consensus pattern (26 bp):
CATACAGAGTTAATTCCCAGTCTAAG
Found at i:813509 original size:888 final size:875
Alignment explanation
Indices: 808659--814271 Score: 5584
Period size: 888 Copynumber: 6.4 Consensus size: 875
808649 CCCAGTCTAA
* * * ** *
808659 GCATATGGAGTTCATTCCCAGTCTAAGATCGGACCGGA-CAGAGGTTTATGGCAGCACATGCT-G
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGATC-GAGGGTTGCGGCAGCACATCCTGG
* * * *
808722 GACTCGGGCATGTGCTGGTGACACATTTTTCTTCGCCGGGGCACCATCACG--AGAGCATCGCCG
65 GA-TCGAGCATGTGCTGGTG-CCCATTTTTCTTCGTCGGGGCACC-TCACGTCGGAGCATCGCCG
* * * * * ** *
808785 AAGAACTTGACCGACGGTATTGAGGTT-TCGGCGATC--ATGGGCCAGGGGGGATGTGCGCACAT
127 GAGAACCTGACCGACGGCATTGGGGTTCT-GACGATCGGGGGGGCC-GGGGGGGTGTGCGCACAT
*
808847 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGG-CCTCCTATCCCTCATCAAACCTTGAG
190 GATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCT-CTATCCCTCATCAAACCTCGAG
808911 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
254 AACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGT
* *
808976 CTGAAATAGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAAATGAAT
319 CTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAAT
* * * * *
809041 TTTTTTGTGCAAGCCAACAAATATACAAGGATCA--C-ATCTAAGTTTAGGACCAAAACTCCTTC
384 TTTTTTGTGCATGCCAAAAAATATACAAGGATCATTCTA-CCAAGTTTGGGGCCAAAACTCCTTC
* * * * * * * *
809103 CGAAAATATTTTAAAAAACCCCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAGCAAG
448 TGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAG
*** * * *
809168 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGGTCATTGTATGAATTTAGATGCCCTAAA
513 TCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAA
809233 AATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
578 AATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * * *
809298 GCTTGCACATCCCGTCTCTTTGGCCGGCGTAGTGCTCGCCTGCCCACCCGCCCGCCCGTCCGCTT
643 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTA----T----TGCCCACCCGCCCGCCCGCCCACTC
* * * ** *
809363 GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGCCTAAGATTGGACCAGACCGAGGGT
700 GTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGT
* * * * ** * * * ** * * *
809428 TGCTGCATCAGTATCGGTAGCACGCAGAGGGTGACCCGACCGATCCCCGGCTTGCGCATTCCGCC
765 TGCGGTAGCAGGATCAATAGCACACAGAGGGGGACCTGGTCGATCCCTGGCTTGTGCA-TCTGCC
* * * ** * *
809493 CCTCTGGCTGGATGAGCGCCCGCACGCTCATTTTGTCGGTTGACCTAG
829 CCTTTGGC-GGTTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
*
809541 ACATACGGAGTTCATTCCCAGTCTAAGCATACAGAGTTAATTCCCAGTCTAAGATTCAGACCTGA
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---A----CAG-----GA-T-----C-G-
* ** * * * * *
809606 CAGAGGTTTACGATAGCACATGCTGGGCTCGGGCA--TGCTTGGTGCCATATTTTTCTTCGTC-A
42 -AG-GG-TTGCGGCAGCACATCCTGGGATCGAGCATGTGC-TGGTGCC-CATTTTTCTTCGTCGG
* *
809668 GGCACCATCACGT--GAGCATCGCAGGGAGCAACCTAGACCGGCCGGCATTGGAGGTT-TCGACG
102 GGCACC-TCACGTCGGAGCATCGC-CGGAG-AACCT-GACC-GACGGCATTGG-GGTTCT-GACG
* * * * *
809730 AT---------CAGGGGGGTTTGCCCACATGATGTGCGGTGGGTGCTGGTACGGTGGCCCTTATA
160 ATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTAC-TTGGCCCTTATA
* *
809786 TTGCGCCCTCTTATCCCTCATCAAACCTTGAGAACTCACACCCCCTTAAAGAGCAATTGAGATTT
224 TTG-GCCCTC-TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTT
809851 TACAGGTTTGGCTGCCACGTAGCCATTAAAGGTGTCTGGAAATGGGGACACTTTTTTCAAATGGT
287 TACAGGTTT-GCTGCCA-GTAGCCATTAAA-GTGTCT-GAAATGGGGACACTTTTTTCAAATGGT
* * * * * *
809916 CACAGAAATCGTGATACACTTTGCGTTTTTCAGATGAA-ATTTCTGTGTATGCCAATTAAAA-AT
348 CACA-AAATCTTG-TACACTTCGAGTTTTT-AGATGAATTTTTTTGTGCATGCCAA--AAAATAT
* * * * *
809979 ACAAGGATCACGTCTTA-CAAG-TTGGGGACAAAAATCATTCCGAAAAAATTTTAAAAAAT-CTC
408 ACAAGGATCA-TTC-TACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCT-
* * * *
810041 GAACCCCAAAAAGTTTAAAAAATCATGAAAAATAAAAAACGAGTCGTCTTGCCATGAAACTTCAC
470 GAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAC
* *
810106 GTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAAT
535 GTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAAT
*
810171 ATG-AGAATGTGCCTAAACCCACCTATCACCCTATCGATCCACGGCTT-CGCATCCCGTCTCTCT
600 ATGAAG-ATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCT
* * * * *
810234 GGTCGACGTAGTG----CCCGCCCGCCCGCCCGCTCGTTTCATCGATTGTCTTAGGCATACGGAG
664 GGCCGGCGTATTGCCCACCCGCCCGCCCGCCCACTCGTTTCATCGATTGGCTTAGGCATACGGAG
* * * * * *
810295 ATCATTCCCAGTCTAAGATTAGACCAGA-TCAAGGGTTGCGGTAGTA-GA--ATTGGCAACACGT
729 TTCATTCCCAGTCTAAGATCAGACCAGACT-GAGGGTTGCGGTAGCAGGATCAATAGC-ACAC--
* * * ** *
810356 AGAGGGGGACCTGGCCAAT-CCTCGACTTGCACATC-CCGCCCTTCTGGCCGGTTGAGCGCCCGC
790 AGAGGGGGACCTGGTCGATCCCT-GGCTTGTGCATCTGC-CCCTT-TGG-CGGTTGAGCGCCCGC
* * *
810419 CCGCTTGTTTCGTGGGTTGACTTAG
851 ACGCTCGTTTCATGGGTTGACTTAG
* * * * * * *
810444 GCATACAGAGTTCATTCCCTGTCCAAGATCGGACTA-GACCGAGGGTTGCAGTAGCACATTCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGAC-AGGATCGAGGGTTGCGGCAGCACATCCTGG
* * * * * * *
810508 GCTCGGGCATGTGCTGGTGCCGTATTTTTCTTTGCCGTGGCA-C-CATCGTCGGAGCATCACCGG
65 GATCGAGCATGTGCTGGTGCC-CATTTTTCTTCGTCGGGGCACCTCA-CGTCGGAGCATCGCCGG
* * * * *
810571 AGAACCTGACCTG-CTGCATTGGGGTTCCGACGATTGGGGGTGCC-GGGGGGTGTGCCCACATGA
128 AGAACCTGACC-GACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGA
* * * * *
810634 TGTGCGATGGGTGCTGGCACTTGGACCTTATATTAGCCCCCTATCCCTCATCAAACCTCAAGAAC
192 TGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCGAGAAC
*
810699 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTTTG
257 TCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTG
* * * * *
810764 AAATGAGGACACTTTTTTCGAATGGCCACAAAATCTTGTACACTTCGATTTTTTAGCTG-ATTTT
322 AAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTT
* * *
810828 TCTTATGCATGCCAAGAAAA-ATACAAGGATCACGTCTACCAAGTTT-GGGCCCAAACTCCTTCT
387 T-TTGTGCATGCCAA-AAAATATACAAGGATCA-TTCTACCAAGTTTGGGGCCAAAACTCCTTCT
* *
810891 GCAAAAA-TTTAAAAAATCCTGAACAGCAAAAA-TTTTCAAAAAT-GTTGAAAAATAGAAAACGA
449 GAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTT-AAAAATCG-TGAAAAATAGAAAACGA
* *
810953 GTCGTCTTGCCATTAAACTTCACGTGAAGGCTTAAGGAACCATTGTAAGAATTTACAAGCCAATA
512 GTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCC-ATA
** ** ** *
811018 AAAATGGCATTGGCA-G-AGCTATCGGAAGATGTG-CTAAACGTA---ACCA-TCTATCG-T--A
576 AAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCA
* * * * * * * *
811073 C-GCTT--GCATTCCGTCTCTCT-GCTC-GTGTAGTGCCCATTCTG-ACGCCCGCTCA---G-TG
641 CGGCTTGCGCATCCCGTCTCTCTGGC-CGGCGTATTGCCCA-CCCGCCCGCCCGCCCACTCGTTT
* * ** * *
811128 CA--GTTTGGCTTAGGCATAC-GAGTTCATT-CCAGTCTAAGAT-TGATGAGACTGA-GTTTGTG
704 CATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCG
* ** *
811187 GGAGCAGGATCAGAT-GCAGC-CA-A-TCGGACCCGG-CGAT--CT---TTCGT--ATTCTG---
769 GTAGCAGGATCA-ATAGCA-CACAGAGGGGGACCTGGTCGATCCCTGGCTT-GTGCA-TCTGCCC
* * * * * *
811237 -TCTGGCGGTTGA--GCTCG-ACGATTCGCTTCGTGGGTTGACCTTAA
830 CTTTGGCGGTTGAGCGCCCGCACG-CTCGTTTCATGGGTTGA-CTTAG
* ** * * *
811281 GCGATAC-GAGTTCATGTCCC-G-CT-AGCTCGAGTTCATTCCCAGTCTAGATGG-TGACGAATC
1 GC-ATACGGAGTTCAT-TCCCAGTCTAAGATCG-G---A----CAGGATCGAGGGTTG-CG--GC
** * **
811341 TTAG-ACAGCTAATGGTGGCTTTAGGCATGTG--GGATG-CC-TTTTTC-T-G-C-GGGCA-C-C
53 --AGCACA--TCCT-G-GGATCGA-GCATGTGCTGG-TGCCCATTTTTCTTCGTCGGGGCACCTC
* * * * *
811395 ATCGTCGCA-CATCG--GCAGAACC-GACCGGCGGCATTGTGGTTCTGACTATCGGGGGGGCC-G
110 A-CGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGG
* * *
811455 GGGGGTGTGCACACATGATGTGCGATGGGTGCTGGTACTTGGCCCATATATTGGCCCCCTATCCC
174 GGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCC
* * * *
811520 TCATCGAACCTCCAGAACACACACCCCCTTAAAGAGCATTTGAGATTTTATAGGTTTGCTGCCAG
239 TCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAG
811585 TAGCCATTAAAGTGTCTGAAATGGGG-CACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG
304 TAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCG
*
811649 AGTTTTTAGATGAATTTTTTTGTGCACGCCAAAAAATATACAAGGATCACTTCTACCAAGTTTGG
369 AGTTTTTAGATGAATTTTTTTGTGCATGCCAAAAAATATACAAGGATCA-TTCTACCAAGTTT-G
** * * * *
811714 GGGCCAATTCTCTTTCTGAAAAAATTTTAAATAATCCTGAACCGTAAAAAGTTTTGAAAATCGTG
432 GGGCCAAAACTCCTTCTGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTG
*
811779 AAAAATAGAAAACGAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGA
497 AAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGA
*
811844 ATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACC
562 ATTTACAAGCCATAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACC
*
811909 ACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCAGGCCGGCGTATTGCCCACCCGCCCGCCC
627 ACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTATTGCCCACCCGCCCGCCC
811974 GCCCACTCGTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTCAAGATCAGACCAG
692 GCCCACTCGTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCT-AAGATCAGACCAG
* * *
812039 AGTGAGGGTTACGGTAGCAGGATCAACAGCACACAGAGGGGGACCTGGTCGATCCC-GGCTTGTG
756 ACTGAGGGTTGCGGTAGCAGGATCAATAGCACACAGAGGGGGACCTGGTCGATCCCTGGCTTGTG
* *
812103 CATCATGCCCCTTTGGTCGGCTGAGCACCCGCACGCTCGTTTCATGGGTTGACTTAG
821 CATC-TGCCCCTTTGG-CGGTTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* *
812160 GCATATGGAGTTCATT-CCAGTGTAAGATCGGACAGGATCGAGGGTTGCGGCAGCACATCCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGATCGAGGGTTGCGGCAGCACATCCTGGG
*
812224 ATCGACCATGTGCTGGTGCCCATTTTTCTTCGTCGGGGCACTGTCGTCGGAGCGTTGCCGGAGCA
66 ATCGAGCATGTGCTGGTGCCCATTTTTCTTCGTCGGGGCAC---C-TC--A-CG-T--CGGAGCA
* *
812289 TCGCTGGAGAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGGTGTACGC
121 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGGTGTGCGC
*
812354 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCTTCAAACCTC
186 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTC
*
812419 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGCTTTGCTGCCAGTAGCCATTAAAG
251 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
*
812484 TGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATG
316 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATG
* **
812549 AATTTTTTTGTGCACGCCAAAAAATATACAAGGATCACTTCTACCAAGTTTGGGGGCCAATTCTC
381 AATTTTTTTGTGCATGCCAAAAAATATACAAGGATCA-TTCTACCAAGTTT-GGGGCCAAAACTC
* * * *
812614 TTTCTGAAAAAATTTTAAATAATCCTGAACCGTAAAAAGTTTTGAAAATCGTGAAAAATAGAAAA
444 CTTCTGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAA
*
812679 CGAGTCGTCTTGCCTTGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCA
509 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCA
*
812744 TAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
574 TAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
*
812809 CACGGCTTGCGCATCCCGTCTCTCAGGCCGGCGTATTGCCCACCCGCCCGCCCGCCCACTCGTTT
639 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTATTGCCCACCCGCCCGCCCGCCCACTCGTTT
* *
812874 CATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGAGTGAGGGTTACG
704 CATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCG
812939 GTAGCAGGATCAATAGCACACAGAGGGGGACCTGGTCGATCCCTGGCTTGTGCATCATGCCCCTT
769 GTAGCAGGATCAATAGCACACAGAGGGGGACCTGGTCGATCCCTGGCTTGTGCATC-TGCCCCTT
*
813004 TGGTCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
833 TGG-CGGTTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
* *
813048 GCATATGGAGTTCATTCCCAGTGTAAGATCGGACAGGATCGAGGGTTGCGGCAGCACATCCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGATCGAGGGTTGCGGCAGCACATCCTGGG
*
813113 ATCGACCATGTGCTGGTGCCCATTTTTCTTCGTCGGGGCACTGTCGTCGGAGCGTTGCCGGAGCA
66 ATCGAGCATGTGCTGGTGCCCATTTTTCTTCGTCGGGGCAC---C-TC--A-CG-T--CGGAGCA
* *
813178 TCGCTGGAGAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGGTGTACGC
121 TCGCCGGAGAACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGGTGTGCGC
*
813243 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCCTCAAACCTC
186 ACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTC
*
813308 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGCTTTGCTGCCAGTAGCCATTAAAG
251 GAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAG
* * *
813373 TGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTCTTAGCTG
316 TGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATG
* * * * *
813438 AATTTTTTTGTGCATGCCAACAAAGATACAAGGATCATGTC-ATCCAAGCTTGTGGCCAAAAATC
381 AATTTTTTTGTGCATGCCAAAAAATATACAAGGATCAT-TCTA-CCAAGTTTGGGGCCAAAACTC
* * * *
813502 CTTCTGAAAAAA-TTTAAAAAATCCCGAACTGCAAAAAGTTTTGAAAATCCTGAAAAATAGAAAA
444 CTTCTGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAA
* ** *
813566 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTTAGGGGCCATTGTACGAATTTACAAGCCA
509 CGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCA
* *
813631 TAAAAATGGCATTGGCATGCAGAAATATGAAGATATGCCTAAACCCACCTACCACCCTATCGATC
574 TAAAAATGGCATTGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATC
* * * * *
813696 CACGGCTTGCGCATCTCGTCTCTCTGGCCGACGTAGTAACCGCCCGCCCGCCCGCCCGCCCGCTC
639 CACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA-T---TGCCCACCCGCCCGCCCGCCCACTC
* ** **
813761 G-TT--TCG-TCGG-TT-GGCATACGGAGTTCATTCCCAGTCTAAGATCAGACTGGACCAAGGGT
700 GTTTCATCGATTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGT
* ** ** * * * *
813820 TGTGG-AGCAGGATCAGCAGCACGTACAGA--GGGTTCTGGTCGATCCCCGACTTTTGCATC-CC
765 TGCGGTAGCAGGATCAATAGCAC--ACAGAGGGGGACCTGGTCGATCCCTGGCTTGTGCATCTGC
*
813881 ACCCTTCTGGCCGGTTGAGCGCCCGCATGCTCGTTTCATGGGTTGACTTAG
828 -CCCTT-TGG-CGGTTGAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAG
813932 GCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGAAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-C-G-G---------A--C----A--GGATCG---
* * * * * **
813997 CAAGGGTTGCGACAGCACATGCTGGGCTTGAGCATGTGCTGCTGTCGTATTTTT-TT--T-----
42 --AGGGTTGCGGCAGCACATCCTGGGATCGAGCATGTGCTGGTG-CCCATTTTTCTTCGTCGGGG
* * * * * * * * * *
814054 CACC-GA-G--GCACCATCGCAGAAGAACCTGACTGGCGGCATTGGGGTTC-CAGTGATC-GGGT
104 CACCTCACGTCGGAGCATCGCCGGAGAACCTGACCGACGGCATTGGGGTTCTGA-CGATCGGGGG
* * ** *
814113 GGTCGGGGGGGTTTGCGTGCATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
168 GGCCGGGGGGGTGTGCGCACATGATGTGCGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTC
* *
814178 TATCCCTCATCAAACCTTGAGAACTCACACCTCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
233 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
*
814243 TACCAGTAGCCATTAAAGTGTCTGAAATG
298 TGCCAGTAGCCATTAAAGTGTCTGAAATG
814272 CTGCCAGGTA
Statistics
Matches: 4068, Mismatches: 407, Indels: 506
0.82 0.08 0.10
Matches are distributed among these distances:
835 7 0.00
836 20 0.00
837 19 0.00
838 98 0.02
839 185 0.05
840 45 0.01
841 103 0.03
842 25 0.01
843 28 0.01
844 5 0.00
845 2 0.00
846 8 0.00
847 14 0.00
848 5 0.00
849 7 0.00
850 15 0.00
851 12 0.00
852 10 0.00
853 24 0.01
854 36 0.01
855 12 0.00
856 16 0.00
857 1 0.00
858 13 0.00
859 16 0.00
860 20 0.00
861 11 0.00
862 15 0.00
863 8 0.00
864 22 0.01
865 29 0.01
866 6 0.00
867 15 0.00
868 14 0.00
869 17 0.00
870 109 0.03
871 76 0.02
872 39 0.01
873 22 0.01
874 36 0.01
875 13 0.00
876 45 0.01
877 40 0.01
878 88 0.02
879 24 0.01
880 36 0.01
881 40 0.01
882 30 0.01
883 12 0.00
884 107 0.03
885 55 0.01
886 43 0.01
887 421 0.10
888 672 0.17
889 452 0.11
890 2 0.00
891 23 0.01
892 1 0.00
893 3 0.00
894 1 0.00
896 2 0.00
897 1 0.00
898 2 0.00
899 2 0.00
900 5 0.00
901 5 0.00
902 11 0.00
903 164 0.04
904 36 0.01
905 23 0.01
906 2 0.00
907 94 0.02
908 29 0.01
909 37 0.01
910 50 0.01
911 45 0.01
912 18 0.00
913 27 0.01
914 18 0.00
915 28 0.01
916 191 0.05
917 4 0.00
919 1 0.00
ACGTcount: A:0.25, C:0.25, G:0.24, T:0.26
Consensus pattern (875 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGACAGGATCGAGGGTTGCGGCAGCACATCCTGGG
ATCGAGCATGTGCTGGTGCCCATTTTTCTTCGTCGGGGCACCTCACGTCGGAGCATCGCCGGAGA
ACCTGACCGACGGCATTGGGGTTCTGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTG
CGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCTCTATCCCTCATCAAACCTCGAGAACTCAC
ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGATGAATTTTTTTG
TGCATGCCAAAAAATATACAAGGATCATTCTACCAAGTTTGGGGCCAAAACTCCTTCTGAAAAAA
TTTTAAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGAACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCATGTAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGGCCGGCGTATTGCCCACCCGCCCGCCCGCCCACTCGTTTCATCGATTGGCT
TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCGGTAGCAGGATCA
ATAGCACACAGAGGGGGACCTGGTCGATCCCTGGCTTGTGCATCTGCCCCTTTGGCGGTTGAGCG
CCCGCACGCTCGTTTCATGGGTTGACTTAG
Found at i:813962 original size:26 final size:26
Alignment explanation
Indices: 813932--813984 Score: 106
Period size: 26 Copynumber: 2.0 Consensus size: 26
813922 GTTGACTTAG
813932 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
813958 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
813984 G
1 G
813985 ATCGGATCGA
Statistics
Matches: 27, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
26 27 1.00
ACGTcount: A:0.26, C:0.26, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:814516 original size:26 final size:26
Alignment explanation
Indices: 814480--814532 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
814470 GTTGACTTAG
814480 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
814506 GCATACGGAGTTCATTCTCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
814532 G
1 G
814533 ATTGGATCAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.26, C:0.25, G:0.21, T:0.28
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:817183 original size:26 final size:26
Alignment explanation
Indices: 817147--817198 Score: 95
Period size: 26 Copynumber: 2.0 Consensus size: 26
817137 GTTGACTTAG
*
817147 GCATATGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
817173 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
817199 AATCGGATCA
Statistics
Matches: 25, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.27, C:0.25, G:0.19, T:0.29
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:818018 original size:905 final size:903
Alignment explanation
Indices: 816268--821145 Score: 6201
Period size: 905 Copynumber: 5.4 Consensus size: 903
816258 GTTGACTTAG
* **
816268 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCGGATTGAGGGTT-ACGGCAGCACATGCTGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGA-GGCAGCACATGCTGG
* *
816332 GCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCGCTGGAG
65 GCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATC-CCGGAG
* * * * * *
816397 AACGTGACCGGCAGCATTGGTGTTCCGACAATCGGGGGGGCCGGAGGGGGTATGCGCACATGATG
129 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGG-GGGGGTGTGCGCACATGATG
* *
816462 TGCGAT-GGTGCTGGTACTTGG-CCTTATATTGG-CCCCTATCCCTCATGAAACCTC-AGAACTC
193 TGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTC
*
816523 ACACCCCCTTAATGAGGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
258 ACACCCCCTTAAAGA-GCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGA
* ** *
816588 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTTGAGTTTGAAGATGAATTTTT
322 AATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTT
* * * *
816653 TTATGCAAGCCAACAAAAATACAGGGATCACGTCTACCAAAGTTTGGGGGCCAAATCTCCTTCTG
387 TTATGCATGCCAACAAAAATACAAGGATCACGTCTACC-AAGTTT-GGGGCCAAAACTCCTTCCG
* ** *
816718 AAAAAA-TTTAGAAAAATCCCGAACCG-TAAAAGTTTTGAAAATCATGAAAAATAGAAAACGAGT
450 AAAAAATTTTA-AAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGT
*
816781 CGTCTTGCCATGAAACTTCACGCGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
514 CGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAA
* * * *
816846 ATAGCATTGGCACGCTAGAAATGTGAAGATGTGCCTAAAGCCACCTACCAACCTATCGATCCACG
579 ATGGCATTGGCACGC-AGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACG
* * * *
816911 GCTTGCGCGTCCCGTCTCTCTGGCCGGCGTAATGCCCCCCCGCCCGCCCGCCCGCTCGTTTCATC
643 GCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCATC
* * * *
816976 AGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAAGATTAGACCGGACCGAGGGTTGGGGCAG
708 AGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAG
* * * ** * * *
817041 CAGGATCGGCAGCACGTAGAGGGGAACCCGACCGATCCCTGGCTTCCGCATCCCGCCCTTCTAGC
773 CAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGC
* ** * * *
817106 CGGCTGAGCGCCTGTGCGCTCATTTTCGTAGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCT
838 CGGCTGAGCGCCCGCACGCTC-GTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCT
817171 AA
902 AA
* * * *
817173 GCATACGGAGTTCATTCCCAGTCTAAAATCGGATCAGACCAAGGGTTGAGACAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGAGGCAGCACATGCTGGG
* * * * * *
817238 CTCGGGCATGTGCTGGTGCCACATTTTTCTTCATCAGGGCACCATCGGCAGAGCATCATCGGAGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATC-CCGGAGA
* * * *
817303 ACCTAACCGGCGGCATTGGGGTT-CGACGATCAGGGGGGCCGGGGGGGATATGCGCACATGATGT
130 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGG-TGTGCGCACATGATGT
* *
817367 GGGATGGGTGCTGGTACTTGGCCCTTATATT-GCCCCCTATCCCTCATCAAACCTCAAGAACTCA
194 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
*
817431 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTATGCTGCCAGTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* * *
817496 TGGGGACACTTTTTTCAAATGGTCACAAAACCTTGTACACTTCGACTTTTTAGCTGAATTGTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * *
817561 GTGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTAGGGGCCAAAATTCCTTTCGAAA
389 ATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTT-GGGGCCAAAACTCCTTCCGAAA
* * * *
817626 AAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTTGAC
453 AAATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTC
* * * * *
817691 TTGCCATAAAACTTCACGTGCAGGCTAAAGGGACCATTGTATGAATTTACAGGCCAAAAAAATGG
518 TTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGG
* * * *
817756 TATTGGCACGTAGAAATATGGAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGACTTG
583 CATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTG
* *
817821 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCATTTCATCGGTTG
648 CGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCATCAGTTG
* * *
817886 GCTTAGGCATACGGAGTTCAATCCCAGTCTAAGATCGGACCGGACCGAGGGTTACGACAGCAGGA
713 GCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCAGGA
*
817951 TCGACAGCACGCAGAGGGGGACCCGCCCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCT
778 TCGACAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCT
* *
818016 GAGCGCCCGCACACTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
843 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * ***
818077 GCATACGGAGTTCATTCCCAGTCTAAGATCGGACCGGATCGAGGGTTGCCACAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGAGGCAGCACATGCTGGG
818142 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCA---TC---G--T--CGGAGAA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCCCGGAGAA
* * * *
818197 CCTGATCGACAGCATTGGGGTTCCGGCGATCGGGGGGGCCAGGGGAGGTGTGCGCACATGATGTG
131 CCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCC-GGGGGGGTGTGCGCACATGATGTG
818262 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
195 TGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCAC
* * * *
818327 ACCCCCTTAAAGAGGATTTGAGATTTTACAGGTTTGCTGTCGGTAGCCATTAAAGTGTCTAAAAT
260 ACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAAT
* * * *
818392 GAGGACACTTTTTTCAAATGGTCACAAAATATTGTACACTTTGAGTTTTTAGCTGAATTGTTTTA
325 GGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTA
* * *
818457 TGCTTGCCAACAAAAATACAAGGATCATGTCTACCAAATTTGGGGCCAAAACTCCTTCCGAAAAA
390 TGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAA
* * * *
818522 ATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAAATCGTGGAAAAGAGAAAACGAGTCATCTT
455 ATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTT
* * *
818587 GCTATGAAACTTCACGTGAAGGCTTAAGGGA-CATTGTTTTAATTTACAAGCCATAAAAATGGCA
520 GCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCA
* **
818651 TTGGCATGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATTGACGGCTTGCG
585 TTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCG
* ** * * * ** *
818716 CATCCCATCTCTCTGGCCGGCGTAAAGCTCGCTCGCCCGCCCGCCCGCTCGTTTTGTCGGTTGGC
650 CATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCATCAGTTGGC
* * * **
818781 TTAGGCATACAGAGTTCATTCCCAGTCTAAGATCAAACCGAACCGAGGGTTGCGGTAGCAGGATC
715 TTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCAGGATC
* * * * *
818846 GGCAGGACACAGAGGGGGACCTGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGA
780 GACAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGA
* * *
818911 GCGCCCGCACGCTTGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAATCTAA
845 GCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
818970 GCACATGGAGTT-A-T--C-G-----GATC-G----GACCGAGGGTGGCGGCAGCACATGCTAGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGAGGCAGCACATGCTGGG
* * * * *
819020 CTCGAGCATGTACTGGTGCTGCATTTTTCTTCACCGGGGCACC-TCCGTCGGAGCAACGCAGGAG
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCAT-CGTCGGAGCATC-CCGGAG
* * * ** * * * * *
819084 AACGTGACTGGCGGCATTGAAGTTTCGACAATCGGAGGGGTC-GGGGGGTGTGCGAACATGATGT
129 AACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGT
* * *
819148 GCGATGGGTGCTAGTACTTGGCCCTTATATTGG-CCCCTATCCCTCATCAAACCTCAAGAACTCA
194 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * * * *
819212 CACCTCCTTAAAGAGCATTTCATATTTTAAAGGTTTGCTACCAGTAGCCATTAAAGTGTCTGAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
* *
819277 TGGGGACACTTTTTTCAAATGGTCACAACATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTT
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTT
* * * **
819342 ATGCATGCCAACAAAAATACAACGATCACGTCTACCAATTTTGGGGCAAAAAAGCCTTCCGAAAA
389 ATGCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAA
* * * * * *
819407 AATTTAAAAAAATCCCAAACCACAAAAAGTTTGAAAAATCATGAAAAA-AGAAAACTAGTCGTCT
454 AATTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCT
* *
819471 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATTTACAAGCCATAAAAATGAC
519 TGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGC
* *
819536 ATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCATCCTATCGATCCACGGCTTGC
584 ATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGC
* * * * *
819601 GCATCCCGTCTCTATGGTCGGCGTAGTG--C-CCC-CCCGCCCGCTCG-T--TTT-GTCGGTTGC
649 GCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCATCAGTTGG
* * * * *
819658 CTTAGGCATACGAAGTTCATTCCCAGTATAAGATCAGACCAGACCGAGGGTTGC-AGGAGCAAGA
714 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGA-CAGCAGGA
* * * * * ** *
819722 TCGACAGCACGTAGAGGGGGACTCGACCGATTCCCAGCTTGTGCATCCCACCCCTCAAGTCGGCT
778 TCGACAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCT
*
819787 GAGCGCCCGCACGCTCGTTTCATGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
843 GAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
* **
819848 GCATACGGAGTTCACTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCTGAC
1 GCATACGGAGTTCATTCCCAGTCTAAG-AT-CGGA--TCA-GACC-G----AG---GG---T---
* * *
819913 CGAGGGTTACGATAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCATCGCCGGGG
47 TGA-GG---C---AGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGG
* * * * * * *
819978 CACCATCGTCGGAGCATCACCGGAGAACCTAACCGGCGACATTAGCGTTTCGGCGATCGGGAGGG
105 CACCATCGTCGGAGCATC-CCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG-GGG
*
820043 CCCGGGGGGGCTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
168 GCCGGGGGGG-TGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCC
* * * * *
820108 TATCCCTCATCAAACCTTGGGAACTTACACCCCCTTAACGAGCATTTGAGATTTTATAGGTTTGC
232 TATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGC
* * * * * *
820173 TGCCAGTAGCCATTAAAGTGTCTAAAATAGGGACATTTTTTTTCGAATGGCCACAATATCTTGTA
297 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA-CTTTTTTCAAATGGTCACAAAATCTTGTA
* * * * * * *
820238 CACTTTGAGTTTTTCGTTAAATTTTTTTATGCATGTCAAAAAAAATACAAGGATCACATCTACCA
361 CACTTCGAGTTTTTAGCTGAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCA
*** *
820303 AGTTTGGGGCCAAAACAAATTCCAAAAAAATTTTAAAAAATCCCGAACC-CAAAAAAGTTTCAAA
426 AGTTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCCGAACCGC-AAAAAGTTTCAAA
*
820367 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGCCTTAAGGGACCAT
490 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
* * *
820432 TGTATGAATTTACAAGCCATAAAAATGGCATTGCCATGCAGAAATATGAAGATGTGCCTAAACCA
555 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCC
* ** *
820497 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCATCTCTCTGGCCGGTATAGTGCCCGCCCA
620 ACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCG
* ** * **
820562 CCCG---TC-CGCTCGTTTCATCAGTTGGCTTAGGCATACGGAGTTCATTTGCAGTCCAAGATTG
685 CCCGCCCGCTCGCTCGTTTCATCAGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCA
* * * * ** * * * * * * **
820623 GATCAGATCAAGGGTTGCGGTAGCAGGATTGGCAGCACACAAAGTGGGACCC-ACTGATCCCGGG
750 GACCGGACCGAGGGTTGCGACAGCAGGATCGACAGCACGCAGAGGGGGACCCGACCGATCCCCAG
* * * *
820687 CTTGCGCATCCCACCCCTCTGGCCAGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
815 CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGC
*
820752 ATACAGAGTTCATTCCCAGTCTAA
880 ATACGGAGTTCATTCCCAGTCTAA
* * * * * * *
820776 GCATACGGAGTTCATTCCCAGTGTAAGATCAGACCAGATCGAGGATTGCGGTAGCACATGCTGGG
1 GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGAGGCAGCACATGCTGGG
* * * ***
820841 CTCGGGCATGTGCTGGTGTCGCATTTTTCTTCATCGGGGCACCATCGCCGGAGCATCGCCATTGA
66 CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATC-CCGGAGA
* * * *
820906 ACCTGACCGACGACTTTGGGGTTCCGACGATCGGGGGGGCCGGGGGGCTTGTTCGCACATGATGT
130 ACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGG-GTGTGCGCACATGATGT
*
820971 GTGATGGGTGCCGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
194 GTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCA
* * *
821036 CACCCCCTTAAAAAGCATTTAAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAA
259 CACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAA
821101 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
324 TGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGA
821146 TCCATGGCTT
Statistics
Matches: 3449, Mismatches: 440, Indels: 173
0.85 0.11 0.04
Matches are distributed among these distances:
878 247 0.07
879 4 0.00
880 1 0.00
881 3 0.00
882 13 0.00
883 7 0.00
884 2 0.00
885 45 0.01
886 355 0.10
887 51 0.01
888 2 0.00
889 37 0.01
890 1 0.00
891 2 0.00
892 1 0.00
893 350 0.10
894 166 0.05
895 196 0.06
896 1 0.00
898 3 0.00
899 1 0.00
900 32 0.01
901 156 0.05
902 97 0.03
903 7 0.00
904 176 0.05
905 422 0.12
906 280 0.08
907 21 0.01
908 2 0.00
909 2 0.00
912 2 0.00
913 2 0.00
915 1 0.00
916 1 0.00
918 2 0.00
919 92 0.03
920 5 0.00
921 6 0.00
922 47 0.01
923 94 0.03
924 148 0.04
925 162 0.05
926 5 0.00
927 3 0.00
928 119 0.03
929 77 0.02
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (903 bp):
GCATACGGAGTTCATTCCCAGTCTAAGATCGGATCAGACCGAGGGTTGAGGCAGCACATGCTGGG
CTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATCCCGGAGAA
CCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGGTGTGCGCACATGATGTGT
GATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACA
CCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATG
GGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTTAT
GCATGCCAACAAAAATACAAGGATCACGTCTACCAAGTTTGGGGCCAAAACTCCTTCCGAAAAAA
TTTTAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTG
CCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCAT
TGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGC
ATCCCGTCTCTCTGGCCGGCGTAGTGCCCGCCCGCCCGCCCGCTCGCTCGTTTCATCAGTTGGCT
TAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGCGACAGCAGGATCG
ACAGCACGCAGAGGGGGACCCGACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAG
CGCCCGCACGCTCGTTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAA
Found at i:818087 original size:26 final size:26
Alignment explanation
Indices: 818051--818103 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
818041 GTTGACTTAG
818051 GCATACGGAGTTCATTCCCAATCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
*
818077 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAATCTAA
818103 G
1 G
818104 ATCGGACCGG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAATCTAA
Found at i:819561 original size:886 final size:891
Alignment explanation
Indices: 814284--821145 Score: 7950
Period size: 886 Copynumber: 7.7 Consensus size: 891
814274 GCCAGGTAGT
* * * **
814284 GCCCGCCCG-CCGCCCGCTTGTTTCGTCAGTTGGCAGAGGCATACGGAGTTCATTCCCAGTCTAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * ** * * * * *
814348 GATTGGACCGGACCGAGGGTTACAATAACAGGATCGACAGCATGCCGAGGGGGACCCGATCGATC
66 GATCAGACCGAACCGAGGGTTGC-GGAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATC
* * ** * *
814413 CCC-GACTTGCGCAGT--CGCCCCTTTGGTCGGCTGAGTACCTGCACGCTCGTTTCGTGCGTTGA
130 CCCAG-CTTGCGCA-TCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGA
* * *
814475 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCTCAGTCTAAGATTGGAT
193 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATTC-CAG----AGATCGGA-
* * * * **
814540 CAGATCGAAGGTTACGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGTATTTTTCTTCGT
252 C----CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCAC
* *
814605 CGGGGCACCATCGTCGAAGCATCGTCGGAGAACCTAACCGACGGCATTGGGGTTCCGACGATCGG
313 CGGGGCACCATCGTCGGAGCATCG-CGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGG
* *
814670 GGGGGCCGGGGGGGTGTGTGCACATGATTTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
377 GGGGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* * * *
814735 CCCTATCCCTCTTCAAACCTTGAGAACTCACACCCCCTTAAAGGGCATTTGAGATTTTATAGGTT
442 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
* * *
814800 TGCTGCCAGTAGCCATTAAAGTGACTGAAATGGGGGCACTTTTTTTGAAATGGTCACAAAATCTT
507 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACAC-TTTTTTCAAATGGTCACAAAATCTT
* * * *
814865 GTACACTTCGAGTTTTTAGCT-GATTTTTTTGTGCATGCCAACAAAAATACAGGGATCACATCTA
571 GTACACTTCGAGTTTTTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTA
* ** * * * * * *
814929 CCAAGTTTGGGGTAAAAACTCCTTTCAAAAAAACTTAAAAAAATCCTGAGCCGCAAAAAGTTTCC
636 CCAATTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCA
814994 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
701 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
*
815059 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAAC
766 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAAC
* * * **
815124 CCACCTACCACCCTATCGATCCATGACTTGCGCATCCCGTTTCTCTGGCCGATGT-A----
831 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAAGCCC
* * * * * **
815180 G--CGCTCACCCGCCCGCTCGTTTCGTTGGTTGGCTTAGGCATACAGAGTTCATTCGTAGTCTAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
815243 GATCAGACCAAACC----G--GC--AGTAGGATAGGCAGCACGTAGAGGGGGACCCGGCCGAT-C
66 GATCAGACCGAACCGAGGGTTGCGGAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCC
* * * * * *
815299 CCTGACTTGCGTATCCCGCCCCTTTGGCCTGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGTCT
131 CCAG-CTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
* * * *
815364 TAGGCATACAGAGTTCATTGCCAGTCTAA-CATATGAAGTTCATTCCCAGTCTAAGATCGGACCA
195 TAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATT-CCAG----AGATCGG----
* * * * * ***
815428 AACCGAGGGTTGCGGCAGCTCATGCTAGGCTCAGGCATGTGCTGGTGTCGCTTTTTTCTTCGGTG
251 -ACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCG
* * * * * * *
815493 GGGCACCATTGACGAAGCATCGCCTGAGAACCTGACTGACGGCAATGGGGTTCTGACGATCGGGG
315 GGGCACCATCGTCGGAGCATCG-CGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGG
** * * * * *
815558 AAGCC-AGGGGGTGTGTGCACATGATGTGCGATGGGTGCTGGTACTTGGCTCTTATATTTGCCCC
379 GGGCCGGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
* * *
815622 CTATCCCTTATCAAACCTCAAGAACTCAGACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
444 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
*
815687 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCGAATGGTCACAAAATCTTGTA
509 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* *
815752 CACTTAGAGTTTTTAGCTGAAA-TTTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTACC
574 CACTTCGAGTTTTTAGCT-AAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACC
** * * * * * *
815816 AAAATTGGGGCCAAAACTTCTTCCAAAAAAACTTT-AAAAAATCCCGAAACGGATAAAGTTTCAC
638 AATTTTGGGGCCAAAACTCCTTCCGAAAAAA-TTTAAAAAAATCCCGAACCGCAAAAAGTTTCAA
* *
815880 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCAGGTGAAGCCTTAAGGGACCA
702 AAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCA
*
815945 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGTAGAAATATGAAGATGTGCCTAAACC
767 TTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACC
* * * *
816010 CACCTACCACCTTATCGATTCACGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCC
832 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA-AGCCC
* * *
816071 GCCCGTCCGCCCGCCTGCCTTTTCGCTCGTTTCATCAGTTGGCTTAGGCATACGGAGTTCATTCT
1 G--C--CCGCCCGCCCGCC----CGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCC
* * * * * *
816136 GAGTCTAAGATCGGGCCGAACC-A-----GC--AACAGGATCAGTAGCACGCAGAGGGGGACCCG
58 CAGTCTAAGATCAGACCGAACCGAGGGTTGCGGAGCAGGATCGGCAGCACGCAGAGGGGGACCCG
* * * * * * * *
816193 GCCAATTCCCGGCTTTCGCATCCTGCACCTCTGGCCGGCTGAGCGCCCGTACGCTCGTTTCGTGG
123 ACCGATCCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGG
*
816258 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCT------A---AG---A-T-C-G-GATCGGAT
188 GTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATTCCAGAGATCGGAC
* * *
816307 TGAGGGTTACGGCAGCACATGCTGGGCTCGAGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGG
253 CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGG
* * * * *
816372 CACCATCGTCGGAGCATCGCTGGAGAACGTGACCGGCAGCATTGGTGTTCCGACAATCGGGGGGG
318 CACCATCGTCGGAGCATCGC-GGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGG
* *
816437 CCGGAGGGGGTATGCGCACATGATGTGCGAT-GGTGCTGGTACTTGG-CCTTATATTGG-CCCCT
382 CCGG-GGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCT
* *
816499 ATCCCTCATGAAACCTC-AGAACTCACACCCCCTTAATGAGGCATTTGAGATTTTACAGGTTTGC
446 ATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGA-GCATTTGAGATTTTACAGGTTTGC
816563 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
510 TGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTAC
* ** * * * *
816628 ACTTTGAGTTTGAAGATGAATTTTTTTATGCAAGCCAACAAAAATACAGGGATCACGTCTACCAA
575 ACTTCGAGTTTTTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACC-A
* * * * * **
816693 AGTTTGGGGGCCAAATCTCCTTCTGAAAAAATTTAGAAAAATCCCGAACCG-TAAAAGTTTTGAA
639 A-TTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAA
* *
816757 AATCATGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGCGAAGGCTTAAGGGACCAT
703 AATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCAT
* * *
816822 TGTATGAATTTACAAGCCATAAAAATAGCATTGGCACGCTAGAAATGTGAAGATGTGCCTAAAGC
768 TGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGC-AGAAATATGAAGATGTGCCTAAACC
* *
816887 CACCTACCAACCTATCGATCCACGGCTTGCGCGTCCCGTCTCTCTGGCCGGCGTAATGCCC
832 CACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAA-GCCC
* * *
816948 CCCCGCCCGCCCGCCCGCTCGTTTCATCAGTTGGCTTAGGCATATGGAGTTCATTCCCAGTCTAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * *
817013 GATTAGACCGGACCGAGGGTTGGGGCAGCAGGATCGGCAGCACGTAGAGGGGAACCCGACCGATC
66 GATCAGACCGAACCGAGGGTTGCGG-AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATC
** * * * * ** * *
817078 CCTGGCTTCCGCATCCCGCCCTTCTAGCCGGCTGAGCGCCTGTGCGCTCATTTTCGTAGGTTGAC
130 CCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTC-GTTTCGTGGGTTGAC
* * *
817143 TTAGGCATATGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAAATCGGATC
194 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATT-CCAG------A---GATC
* * * * * * *
817208 AGACCAAGGGTTGAGACAGCACATGCTAGGCTCGGGCATGTGCTGGTGCCACATTTTTCTTCATC
249 GGACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACC
* * * * * * *
817273 AGGGCACCATCGGCAGAGCATCATCGGAGAACCTAACCGGCGGCATTGGGGTT-CGACGATCAGG
314 GGGGCACCATCGTCGGAGCATC-GCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGG
* *
817337 GGGGCCGGGGGGGATATGCGCACATGATGTGGGATGGGTGCTGGTACTTGGCCCTTATATT-GCC
378 GGGGCCGGGGGGG-TGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCC
* *
817401 CCCTATCCCTCATCAAACCTCAAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTA
442 CCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTT
*
817466 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAACCTTG
507 TGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTG
* * * *
817531 TACACTTCGACTTTTTAGCTGAATTGTTTTGTGCATGCCAACAAAAATACAAGGATCACGTCTAC
572 TACACTTCGAGTTTTTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTAC
* * * * * *
817596 CAAGTTTAGGGGCCAAAATTCCTTTCGAAAAAATTTTAAAAAATCTCGAACCGTAAAAAGTTTCA
637 CAA-TTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCA
* * * * *
817661 AAAATCGTGAAAAATAGAAAACGAGTTGACTTGCCATAAAACTTCACGTGCAGGCTAAAGGGACC
701 AAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACC
* * * * *
817726 ATTGTATGAATTTACAGGCCAAAAAAATGGTATTGGCACGTAGAAATATGGAGATGTGCCTAAAC
766 ATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAAC
* *
817791 CCACCTACCACCCTATCGATCCACGACTTGCGCATCCCGTCTCTCTGGCCGGCGTAGTGCCC
831 CCACCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTA-AGCCC
* * *
817853 GCCCGCCCGCCCGCTCGCTCATTTCATCGGTTGGCTTAGGCATACGGAGTTCAATCCCAGTCTAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * * * *
817918 GATCGGACCGGACCGAGGGTTACGACAGCAGGATCGACAGCACGCAGAGGGGGACCCGCCCGATC
66 GATCAGACCGAACCGAGGGTTGCG-GAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATC
*
817983 CCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACACTCGTTTCGTGGGTTGACT
130 CCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
* * *
818048 TAGGCATACGGAGTTCATTCCCAATCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCG
195 TAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATT-CCAG----AGATCGGA-C-
**
818113 GATCGAGGGTTGCCACAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCG
253 ---CGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCG
* * *
818178 GGGCACCA---TC---G--T--CGGAGAACCTGATCGACAGCATTGGGGTTCCGGCGATCGGGGG
315 GGGCACCATCGTCGGAGCATCGCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGG
*
818233 GGCCAGGGGAGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
380 GGCC-GGGGGGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCC
*
818298 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGGATTTGAGATTTTACAGGTTTG
444 CTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTG
* * * * *
818363 CTGTCGGTAGCCATTAAAGTGTCTAAAATGAGGACACTTTTTTCAAATGGTCACAAAATATTGTA
509 CTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTA
* * * * *
818428 CACTTTGAGTTTTTAGCTGAATTGTTTTATGCTTGCCAACAAAAATACAAGGATCATGTCTACCA
574 CACTTCGAGTTTTTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCA
* * *
818493 AATTTGGGGCCAAAACTCCTTCCGAAAAAATTTTAAAAAATCCTGAACCGCAAAAAGTTTCAAAA
639 ATTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAA
* * * *
818558 ATCGTGGAAAAGAGAAAACGAGTCATCTTGCTATGAAACTTCACGTGAAGGCTTAAGGGA-CATT
704 ATCGTGAAAAATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATT
* * *
818622 GTTTTAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATATGAAGATGTGCCTAAACCCA
769 GTATGAATTTACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCA
** * *
818687 CCTACCACCCTATCGATTGACGGCTTGCGCATCCCATCTCTCTGGCCGGCGTAAAGCTC
834 CCTACCACCCTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGT-AAGCCC
* ** *
818746 GCTCGCCCGCCCGCCCGCTCGTTTTGTCGGTTGGCTTAGGCATACAGAGTTCATTCCCAGTCTAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
818811 GATCAAACCGAACCGAGGGTTGCGGTAGCAGGATCGGCAGGACACAGAGGGGGACCTGACCGATC
66 GATCAGACCGAACCGAGGGTTGCGG-AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATC
* * *
818876 CCCAGCTTGCGCATCCCGCCCCTCTGGCCGACTGAGCGCCCGCACGCTTGTTTCATGGGTTGACT
130 CCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACT
*
818941 TAGGCATACGGAGTTCATTCCCAATCTAAGCACATGGAGTT-A-T-C-G-GATCGGACCGAGGGT
195 TAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATTCCAGAGATCGGACCGAGGGT
* * * * *
819001 GGCGGCAGCACATGCTAGGCTCGAGCATGTACTGGTGCTGCATTTTTCTTCACCGGGGCACC-TC
260 TGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCAT-
* * * * ** * * * *
819065 CGTCGGAGCAACGCAGGAGAACGTGACTGGCGGCATTGAAGTTTCGACAATCGGAGGGGTC-GGG
324 CGTCGGAGCATCGC-GGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGG
* * *
819129 GGGTGTGCGAACATGATGTGCGATGGGTGCTAGTACTTGGCCCTTATATTGG-CCCCTATCCCTC
388 GGGTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTC
* * * * * *
819193 ATCAAACCTCAAGAACTCACACCTCCTTAAAGAGCATTTCATATTTTAAAGGTTTGCTACCAGTA
453 ATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTA
*
819258 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAACATCTTGTACACTTCGAG
518 GCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAG
*
819323 TTTTTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAACGATCACGTCTACCAATTTTGGGG
583 TTTTTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAATTTTGGGG
* ** * * * *
819388 CAAAAAAGCCTTCCGAAAAAATTTAAAAAAATCCCAAACCACAAAAAGTTTGAAAAATCATGAAA
648 CCAAAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAA
* *
819453 AA-AGAAAACTAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACAATTGTATGAATT
713 AATAGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATT
* * *
819517 TACAAGCCATAAAAATGACATTGGCACACAGAAATATGAAGATGTGCCTAAACCCACCTACCATC
778 TACAAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACC
* * *
819582 CTATCGATCCACGGCTTGCGCATCCCGTCTCTATGGTCGGCGT-AG--T
843 CTATCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAAGCCC
** * * *
819628 G--C-CCC-CCCGCCCGCTCGTTTTGTCGGTTGCCTTAGGCATACGAAGTTCATTCCCAGTATAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
* * * *
819689 GATCAGACC-AGACCGAGGGTTGCAGGAGCAAGATCGACAGCACGTAGAGGGGGACTCGACCGAT
66 GATCAGACCGA-ACCGAGGGTTGC-GGAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
* * * ** * *
819753 TCCCAGCTTGTGCATCCCACCCCTCAAGTCGGCTGAGCGCCCGCACGCTCGTTTCATGGGTTGAC
129 CCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
819818 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCATACGGAGTTCACTCCCAGTCTAAGCATACGGA
194 TTAGGCATACGGAGTTCATT-CC---C--AG--T-C-----T-A-----AG-C--A-CAT--GGA
* **
819883 GTTCATTCCCAGTCTAAGATCGGACCTGACCGAGGGTTACGATAGCACATGCTGGGCTCGGGCAT
233 GTTCATT-CCAG----AGATC-G----GACCGAGGGTTGCGGCAGCACATGCTGGGCTCGGGCAT
* * * *
819948 GTGCTGGTGCCGCATTTTTCATCGCCGGGGCACCATCGTCGGAGCATCACCGGAGAACCTAACCG
288 GTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCGTCGGAGCATC-GCGGAGAACCTGACCG
* * * * * * *
820013 GCGACATTAGCGTTTCGGCGATCGGGAGGGCCCGGGGGGGCTGTGCGCACATGATGTGTGATGGG
352 ACGGCATTGGGGTTCCGACGATCGGG-GGGGCCGGGGGGG-TGTGCGCACATGATGTGTGATGGG
* * *
820078 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTTGGGAACTTACACCCCCT
415 TGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCT
* * * *
820143 TAACGAGCATTTGAGATTTTATAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTAAAATAGGGACA
480 TAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACA
* * * * * * *
820208 TTTTTTTTCGAATGGCCACAATATCTTGTACACTTTGAGTTTTTCGTTAAATTTTTTTATGCATG
545 -CTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTAAATTTTTTTATGCATG
* * * * *** * *
820273 TCAAAAAAAATACAAGGATCACATCTACCAAGTTTGGGGCCAAAACAAATTCCAAAAAAATTTTA
609 CCAACAAAAATACAAGGATCACGTCTACCAATTTTGGGGCCAAAACTCCTTCCGAAAAAATTTAA
820338 AAAAATCCCGAACC-CAAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
674 AAAAATCCCGAACCGC-AAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCGTCTTGCCAT
* *
820402 GAAACTTCACGTGAAGCCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGCC
738 GAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGC
* *
820467 ATGCAGAAATATGAAGATGTGCCTAAACCAACCTACCACCCTATCGATCCACGGCTTGCGCATCC
803 ACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTATCGATCCACGGCTTGCGCATCC
* *
820532 CATCTCTCTGGCC-G-GTATAG--T
868 CGTCTCTCTGGCCGGCGTA-AGCCC
* * * ** *
820553 GCCCGCCCACCCGTCCGCTCGTTTCATCAGTTGGCTTAGGCATACGGAGTTCATTTGCAGTCCAA
1 GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
** * * * * * * * *
820618 GATTGGATC-AGATCAAGGGTTGCGGTAGCAGGATTGGCAGCACACAAAGTGGGACCC-ACTGAT
66 GATCAGACCGA-ACCGAGGGTTGCGG-AGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGAT
** * * * *
820681 CCCGGGCTTGCGCATCCCACCCCTCTGGCCAGTTGAGCACCCGCACGCTCGTTTCGTGGGTTGAC
129 CCCCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGAC
* * * *
820746 TTAGGCATACAGAGTTCATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTGTAAGATCAGACC
194 TTAGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATT-CCA--G--AGATCGGACC
* * *
820811 AGATCGAGGATTGCGGTAGCACATGCTGGGCTCGGGCATGTGCTGGTGTCGCATTTTTCTTCATC
254 -GA--G-GG-TTGCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACC
* * * *
820876 GGGGCACCATCGCCGGAGCATCGC-CATTGAACCTGACCGACGACTTTGGGGTTCCGACGATCGG
314 GGGGCACCATCGTCGGAGCATCGCGGA--GAACCTGACCGACGGCATTGGGGTTCCGACGATCGG
* * *
820940 GGGGGCCGGGGGGCTTGTTCGCACATGATGTGTGATGGGTGCCGGTACTTGGCCCTTATATTGGC
377 GGGGGCCGGGGGG-GTGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGC
* *
821005 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAAAGCATTTAAGATTTTACAGGT
441 CCCCTATCCCTCATCAAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGT
*
821070 TTGCTGCCAGTAGCCATTAAAGTGTCTAAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
506 TTGCTGCCAGTAGCCATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTT
821135 GTACACTTCGA
571 GTACACTTCGA
821146 TCCATGGCTT
Statistics
Matches: 5136, Mismatches: 652, Indels: 352
0.84 0.11 0.06
Matches are distributed among these distances:
869 57 0.01
870 1 0.00
873 12 0.00
874 22 0.00
875 163 0.03
876 226 0.04
877 129 0.03
878 338 0.07
879 47 0.01
880 1 0.00
881 8 0.00
882 3 0.00
883 7 0.00
884 47 0.01
885 458 0.09
886 533 0.10
887 122 0.02
888 4 0.00
889 37 0.01
890 2 0.00
891 5 0.00
892 3 0.00
893 352 0.07
894 174 0.03
895 251 0.05
896 3 0.00
897 13 0.00
898 5 0.00
899 7 0.00
900 35 0.01
901 324 0.06
902 131 0.03
903 5 0.00
904 170 0.03
905 395 0.08
906 275 0.05
907 22 0.00
908 3 0.00
909 1 0.00
913 1 0.00
914 5 0.00
915 1 0.00
919 104 0.02
920 7 0.00
921 6 0.00
922 48 0.01
923 95 0.02
924 148 0.03
925 157 0.03
927 3 0.00
928 83 0.02
929 87 0.02
ACGTcount: A:0.26, C:0.25, G:0.24, T:0.25
Consensus pattern (891 bp):
GCCCGCCCGCCCGCCCGCTCGTTTCATCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAA
GATCAGACCGAACCGAGGGTTGCGGAGCAGGATCGGCAGCACGCAGAGGGGGACCCGACCGATCC
CCAGCTTGCGCATCCCGCCCCTCTGGCCGGCTGAGCGCCCGCACGCTCGTTTCGTGGGTTGACTT
AGGCATACGGAGTTCATTCCCAGTCTAAGCACATGGAGTTCATTCCAGAGATCGGACCGAGGGTT
GCGGCAGCACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCACCGGGGCACCATCG
TCGGAGCATCGCGGAGAACCTGACCGACGGCATTGGGGTTCCGACGATCGGGGGGGCCGGGGGGG
TGTGCGCACATGATGTGTGATGGGTGCTGGTACTTGGCCCTTATATTGGCCCCCTATCCCTCATC
AAACCTCGAGAACTCACACCCCCTTAAAGAGCATTTGAGATTTTACAGGTTTGCTGCCAGTAGCC
ATTAAAGTGTCTGAAATGGGGACACTTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTT
TTAGCTAAATTTTTTTATGCATGCCAACAAAAATACAAGGATCACGTCTACCAATTTTGGGGCCA
AAACTCCTTCCGAAAAAATTTAAAAAAATCCCGAACCGCAAAAAGTTTCAAAAATCGTGAAAAAT
AGAAAACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC
AAGCCATAAAAATGGCATTGGCACGCAGAAATATGAAGATGTGCCTAAACCCACCTACCACCCTA
TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGGCGTAAGCCC
Found at i:819852 original size:26 final size:26
Alignment explanation
Indices: 819822--819900 Score: 149
Period size: 26 Copynumber: 3.0 Consensus size: 26
819812 GTTGACTTAG
819822 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
*
819848 GCATACGGAGTTCACTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
819874 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACGGAGTTCATTCCCAGTCTAA
819900 G
1 G
819901 ATCGGACCTG
Statistics
Matches: 51, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 51 1.00
ACGTcount: A:0.27, C:0.28, G:0.20, T:0.25
Consensus pattern (26 bp):
GCATACGGAGTTCATTCCCAGTCTAA
Found at i:820786 original size:26 final size:26
Alignment explanation
Indices: 820750--820802 Score: 88
Period size: 26 Copynumber: 2.0 Consensus size: 26
820740 GTTGACTTAG
820750 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
* *
820776 GCATACGGAGTTCATTCCCAGTGTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
820802 G
1 G
820803 ATCAGACCAG
Statistics
Matches: 25, Mismatches: 2, Indels: 0
0.93 0.07 0.00
Matches are distributed among these distances:
26 25 1.00
ACGTcount: A:0.28, C:0.25, G:0.21, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:821413 original size:25 final size:25
Alignment explanation
Indices: 821379--821426 Score: 96
Period size: 25 Copynumber: 1.9 Consensus size: 25
821369 GTTGACTTAG
821379 GCATACGGAGTTCATTCCCAGTCAA
1 GCATACGGAGTTCATTCCCAGTCAA
821404 GCATACGGAGTTCATTCCCAGTC
1 GCATACGGAGTTCATTCCCAGTC
821427 TAAGATCAGA
Statistics
Matches: 23, Mismatches: 0, Indels: 0
1.00 0.00 0.00
Matches are distributed among these distances:
25 23 1.00
ACGTcount: A:0.25, C:0.29, G:0.21, T:0.25
Consensus pattern (25 bp):
GCATACGGAGTTCATTCCCAGTCAA
Found at i:822894 original size:889 final size:876
Alignment explanation
Indices: 821142--823322 Score: 2796
Period size: 889 Copynumber: 2.4 Consensus size: 876
821132 CTTGTACACT
* * * *
821142 TCGATCCATGGCTTGCGCATCCCGTCTCTCTGGCCGACGTAGTGCCCGCCCGCCCGCTCATTTCG
1 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGACCGACATAGT--------GCCCGCTCGTTTCG
* *
821207 TCGGTTGGCTTAGGCATACGGAGTTCATTCCTAGTCTAAGATCGGACCAGACCAAGGGTT-ATGA
58 TCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCTGA
*
821271 TAGCAGGATCGGCAGCAGGCAGAGGGGGAACC-AGCCGATCCCCGGCTTGCGCATCCCGCCCCTC
123 TAGCAGGATCGGCAGCACGCAGAGGGGG-ACCGAGCCGAT-CCCGGCTTGCGCATCCCGCCCCTC
* * * * *
821335 CGGCTGGCTGAGCGCCCGCACACTCGTTTTGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
186 AGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAG
**
821400 TC-AAGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCGGACCGAGGGTTGTGGCAGCACATG
251 TCTAAGCATACGGAGTTCATTCCCAGTCTAAGATC-GA-CGGACCGAGGGTTACGGCAGCACATG
* * * *
821464 CTGGGCTCGTGCATGTGCTGGTGCCACATTTTTCTTCACCGGTGGCACCATCGTCGGACGCTTCA
314 CTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGG-GGCACCATCGTCGGA-GCATCA
* * * *
821529 CCTGGAGATCCTGACCGGCGGCATTGGGGTTCCAGCGATGGGCGGGGCTGTGTGGCACATGATGT
377 CCTGGAGAACCTGACCGGCGGCATTAGGGTTCCAGCGAGGGGCGGGGCTGTGTGGCACATGATAT
*
821594 GTGATTGGGTGCGCTAACTTGGCCCTTATATTGGCCCCTTATCCTCCATCACCTCAAGACTAACC
442 GCGATTGGGTGCGCTAACTTGGCCCTTATATTGGCCCCTTATCCTCCATCACCTCAAGACTAACC
*
821659 CCTTAAAGAGCATTTGAGAATTTTCAACAGGTTGCGACCAGGTAGCCTTTTAAAGTGTCTGAATG
507 CCTTAAAGAGCATTTGAGAATTTTCAACAGGTTGCGACCAGGTAGCCTATTAAAGTGTCTGAATG
*
821724 GGGACACTTTTTCAAATGGTCACAAAATCTTGTACACTTCGAGTTTTTAGCTGAATTTTTTGTGC
572 GGGACACTTTTTCAAATGGTCACAAAATCTCGTACACTTCGAGTTTTTAGCTGAATTTTTTGTGC
* * *
821789 CATGCCAACATAAATAAAGGATCACGTCTACCAAGTTTGGGGCCAAGACTCCTTCCAAAAAAATT
637 CATGCCAACAAAAATAAAGGATCACGTCTACCAAGTTTGGGACCAAAACTCCTTCCAAAAAAATT
*
821854 TAAAAAAATCCCAAACCGCAGAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCC
702 TAAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCC
821919 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
767 ATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTG
* * * *
821984 GCATGCAGAAATATGAAGATGTGCCTAAACCCACCTATCGCCTTA
832 GCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTA
** * *
822029 TCGATCCACGGCTTGCGCATCTTGTCTCTCTGACCGACGTAGTGCCCGCTCGTTTCATCGGTTGG
1 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGACCGACATAGTGCCCGCTCGTTTCGTCGGTTGG
* **
822094 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCAGACCAGACTGAGGGTTGCTG-TAGCAGGA
66 CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCTGATAGCAGGA
* * * *
822158 TTGGCAGCACGCAGAGGGGGACCTGAGTCGATCCTCGACTTACGCATCCCGCCCCTCAGGCCGGC
131 TCGGCAGCACGCAGAGGGGGACC-GAGCCGATCC-CGGCTTGCGCATCCCGCCCCTCAGGCCGGC
* * *
822223 TGAGCACCCGCACGCTCCTTTCGTGGGTTGACTTAGGCATATGGAGTTCATTCCCAGTCTAAGCA
194 TGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCA
* * * ** *
822288 TACAGAGTTCATTCCCAGTCTAAGATCGGACTGGACCGAGGGTTACAGTAGCACATGCTATGCCC
259 TACGGAGTTCATTCCCAGTCTAAGATC-GAC-GGACCGAGGGTTACGGCAGCACATGCTGGGCTC
* *
822353 GGGCATGTACTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCATC-GGAGAAC
322 GGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCTGGAGAAC
* * * **
822417 TTGACTGGCAGG-ATTAGGGTTCTGATGATC-AGGGGGCCGGCGGGGGTGTGTGCACATGATATG
387 CTGACCGGC-GGCATTAGGGTTC-CA-G--CGA-GGGG-CGG-GGCTGTGTG-GCACATGATATG
* * *
822480 CGA-TGGGTGCTGGT-ACTTGGCCCTTATATTGGTCCCC-TATCC-CTCATCAAACCTCGAGAAG
443 CGATTGGGTGC-GCTAACTTGGCCCTTATATTGG-CCCCTTATCCTC-CATC--ACCTCAAG-AC
*
822541 TCACACCCCCTTAAAGAGCATTTGAG-ATTTT--ACAAGTTTGCTG-CCA-GTAGCC-ATTAAAG
502 T-A-A-CCCCTTAAAGAGCATTTGAGAATTTTCAAC-AGGTTGC-GACCAGGTAGCCTATTAAAG
822600 TGTCTGAAATGGGGACACCTTTTTCAAATGGTCACAAAATCTCGTACACTTCGAGTTTTTAGCTG
562 TGTCTG-AATGGGGACA-CTTTTTCAAATGGTCACAAAATCTCGTACACTTCGAGTTTTTAGCTG
** *
822665 AAGTTTTTTGTG-CATGGTAACAAAAATACAATGATCACGTCTACCAAGTTTGGGACCAAAACTC
625 AA-TTTTTTGTGCCATGCCAACAAAAATA-AAGGATCACGTCTACCAAGTTTGGGACCAAAACTC
* ** *
822729 CTTCCGAAAAAATTCT-AAAAAATCCTGAACCGCAAAAAGTTTTAAAAATCGTGAAAAATAGAAA
688 CTTCCAAAAAAATT-TAAAAAAATCCCAAACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAA
*
822793 ACGAGTCGTCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTACAAAGC
752 ACGAGTCATCTTGCCATGAAACTTCACGTGAAGGCTTAAGGGACCATTGTATGAATTTAC-AAGC
822858 CATAAAAATGGCATTGGCATGCA-AAATATAAAGATGTGCCTAAACCCACCTACCACCCTA
816 CATAAAAATGGCATTGGCATGCAGAAATATAAAGATGTGCCTAAACCCACCTACCACCCTA
*
822918 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGGCCGACATAGTGCCCGCCCGTCCACCCGCCCGC
1 TCGATCCACGGCTTGCGCATCCCGTCTCTCTGACCGACATAGTGCCCG--C-T-----------C
* * * *
822983 TTGTTTTGTCGATTGGCTTTGGCATACAGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGG
52 --GTTTCGTCGGTTGGCTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGG
* * * *
823048 GTTGC-GACAGCATGATCGGTAGCACGCAGAGGGGGACCCGA-CCGATCCCTGGCTTGTGCATCC
115 GTTGCTGATAGCAGGATCGGCAGCACGCAGAGGGGGA-CCGAGCCGATCCC-GGCTTGCGCATCC
* * * * *
823111 CGCCCCTCTGGTCGGCTGAGTGCACGCACGCTCATTTCGTGGGTTGACTTAGGCATACAGAGTTC
178 CGCCCCTCAGGCCGGCTGAGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTC
823176 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAG-T---CGGACCGAGGGTTACGGCAG
243 ATTCCCAGTCTAAGCATACGGAGTTCATTCCCAGTCTAAGATCGACGGACCGAGGGTTACGGCAG
* *
823237 CACATGCTGGGATCGGGCATGTGCTGGTGTCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGC
308 CACATGCTGGGCTCGGGCATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGC
* * *
823302 ATCTCC-GAAGAACCTGTCCGG
373 ATCACCTGGAGAACCTGACCGG
823323 TAGTGTCATA
Statistics
Matches: 1130, Mismatches: 113, Indels: 91
0.85 0.08 0.07
Matches are distributed among these distances:
878 25 0.02
879 105 0.09
880 105 0.09
881 90 0.08
882 4 0.00
883 4 0.00
884 41 0.04
885 19 0.02
886 19 0.02
887 59 0.05
888 71 0.06
889 241 0.21
890 48 0.04
891 1 0.00
892 1 0.00
898 91 0.08
899 1 0.00
903 3 0.00
904 113 0.10
905 87 0.08
906 2 0.00
ACGTcount: A:0.24, C:0.26, G:0.25, T:0.25
Consensus pattern (876 bp):
TCGATCCACGGCTTGCGCATCCCGTCTCTCTGACCGACATAGTGCCCGCTCGTTTCGTCGGTTGG
CTTAGGCATACGGAGTTCATTCCCAGTCTAAGATCGGACCAGACCAAGGGTTGCTGATAGCAGGA
TCGGCAGCACGCAGAGGGGGACCGAGCCGATCCCGGCTTGCGCATCCCGCCCCTCAGGCCGGCTG
AGCGCCCGCACGCTCATTTCGTGGGTTGACTTAGGCATACGGAGTTCATTCCCAGTCTAAGCATA
CGGAGTTCATTCCCAGTCTAAGATCGACGGACCGAGGGTTACGGCAGCACATGCTGGGCTCGGGC
ATGTGCTGGTGCCGCATTTTTCTTCATCGGGGCACCATCGTCGGAGCATCACCTGGAGAACCTGA
CCGGCGGCATTAGGGTTCCAGCGAGGGGCGGGGCTGTGTGGCACATGATATGCGATTGGGTGCGC
TAACTTGGCCCTTATATTGGCCCCTTATCCTCCATCACCTCAAGACTAACCCCTTAAAGAGCATT
TGAGAATTTTCAACAGGTTGCGACCAGGTAGCCTATTAAAGTGTCTGAATGGGGACACTTTTTCA
AATGGTCACAAAATCTCGTACACTTCGAGTTTTTAGCTGAATTTTTTGTGCCATGCCAACAAAAA
TAAAGGATCACGTCTACCAAGTTTGGGACCAAAACTCCTTCCAAAAAAATTTAAAAAAATCCCAA
ACCGCAAAAAGTTTCAAAAATCGTGAAAAATAGAAAACGAGTCATCTTGCCATGAAACTTCACGT
GAAGGCTTAAGGGACCATTGTATGAATTTACAAGCCATAAAAATGGCATTGGCATGCAGAAATAT
AAAGATGTGCCTAAACCCACCTACCACCCTA
Found at i:823199 original size:26 final size:26
Alignment explanation
Indices: 823163--823215 Score: 97
Period size: 26 Copynumber: 2.0 Consensus size: 26
823153 GTTGACTTAG
823163 GCATACAGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
*
823189 GCATACGGAGTTCATTCCCAGTCTAA
1 GCATACAGAGTTCATTCCCAGTCTAA
823215 G
1 G
823216 TCGGACCGAG
Statistics
Matches: 26, Mismatches: 1, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
26 26 1.00
ACGTcount: A:0.28, C:0.26, G:0.19, T:0.26
Consensus pattern (26 bp):
GCATACAGAGTTCATTCCCAGTCTAA
Found at i:823882 original size:59 final size:59
Alignment explanation
Indices: 823790--824084 Score: 398
Period size: 58 Copynumber: 5.0 Consensus size: 59
823780 TCTTGTGTAG
* *
823790 GGAAAATTGATACTTTAAACTTTTCCCCAAAAATACTTTTTTTGAAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATACTTTTTTTGAAAATTTATTTTTAA
* * *
823849 GGAAAATTGATACTTTTAACTTTTCCCAAAAAATA-TTTTTTTAAAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATACTTTTTTTGAAAATTTATTTTTAA
* * * * **
823907 GAAAAATTGATACTTTCAACTTTTCCTTAAAAATATTTTTTTTGAAACTTTGATTTCCAA
1 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATACTTTTTTTGAAAATTT-ATTTTTAA
* *
823967 GGAAAATTGATACTTTCAACTTTT-CCTCAAAAA-CCCTTTTTTGAAAATTTATTTTTAA
1 GGAAAATTGATACTTTCAACTTTTCCCT-AAAAATACTTTTTTTGAAAATTTATTTTTAA
* *
824025 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGGAAATTTTGATTTTTA
1 GGAAAATTGATACTTTCAACTTTTCCCTAAAAATACTTTTTTT-GAAAATTT-ATTTTTA
824085 TTTAAAGAAA
Statistics
Matches: 206, Mismatches: 23, Indels: 12
0.85 0.10 0.05
Matches are distributed among these distances:
58 88 0.43
59 70 0.34
60 41 0.20
61 7 0.03
ACGTcount: A:0.36, C:0.12, G:0.07, T:0.45
Consensus pattern (59 bp):
GGAAAATTGATACTTTCAACTTTTCCCTAAAAATACTTTTTTTGAAAATTTATTTTTAA
Found at i:824014 original size:118 final size:118
Alignment explanation
Indices: 823792--824081 Score: 422
Period size: 118 Copynumber: 2.5 Consensus size: 118
823782 TTGTGTAGGG
* * * **
823792 AAAATTGATACTTTAAACTTTTCCCCAAAAATACTTTTTTTGAAAATTT-ATTTTTAAGGAAAAT
1 AAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGAAAATTTGATTTCCAAGGAAAAT
* * *
823856 TGATACTTTTAACTTTTCCCAAAAAATATTTTTTTAAAAATTTATTTTTAAGA
66 TGATACTTTCAACTTTTCCCAAAAAACACTTTTTTAAAAATTTATTTTTAAGA
* *
823909 AAAATTGATACTTTCAACTTTTCCTTAAAAATATTTTTTTTGAAACTTTGATTTCCAAGGAAAAT
1 AAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGAAAATTTGATTTCCAAGGAAAAT
* * *
823974 TGATACTTTCAACTTTTCCTC-AAAAACCCTTTTTTGAAAATTTATTTTTAAGG
66 TGATACTTTCAACTTTTCC-CAAAAAACACTTTTTTAAAAATTTATTTTTAAGA
*
824027 AAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGGAAATTTTGATTT
1 AAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTT-GAAAATTTGATTT
824082 TTATTTAAAG
Statistics
Matches: 155, Mismatches: 15, Indels: 4
0.89 0.09 0.02
Matches are distributed among these distances:
117 44 0.28
118 98 0.63
119 13 0.08
ACGTcount: A:0.36, C:0.12, G:0.07, T:0.46
Consensus pattern (118 bp):
AAAATTGATACTTTCAACTTTTCCCTAAAAATATTTTTTTTGAAAATTTGATTTCCAAGGAAAAT
TGATACTTTCAACTTTTCCCAAAAAACACTTTTTTAAAAATTTATTTTTAAGA
Found at i:824111 original size:14 final size:14
Alignment explanation
Indices: 824092--824149 Score: 57
Period size: 14 Copynumber: 4.2 Consensus size: 14
824082 TTATTTAAAG
*
824092 AAAATAGAATAATA
1 AAAATAGAAAAATA
824106 AAAATAGAAAAATA
1 AAAATAGAAAAATA
* * *
824120 AAGAAAAGTAAAACA
1 AA-AATAGAAAAATA
824135 AAAAT--AAAAATA
1 AAAATAGAAAAATA
824147 AAA
1 AAA
824150 TTAAGATAAA
Statistics
Matches: 36, Mismatches: 7, Indels: 4
0.77 0.15 0.09
Matches are distributed among these distances:
12 8 0.22
14 17 0.47
15 11 0.31
ACGTcount: A:0.78, C:0.02, G:0.07, T:0.14
Consensus pattern (14 bp):
AAAATAGAAAAATA
Found at i:824119 original size:17 final size:17
Alignment explanation
Indices: 824099--824149 Score: 52
Period size: 17 Copynumber: 2.9 Consensus size: 17
824089 AAGAAAATAG
824099 AATAATAAAAATAGAAA-
1 AATAATAAAAATA-AAAC
824116 AATAA-AGAAAAGTAAAAC
1 AATAATA-AAAA-TAAAAC
*
824134 AAAAATAAAAATAAAA
1 AATAATAAAAATAAAA
824150 TTAAGATAAA
Statistics
Matches: 29, Mismatches: 1, Indels: 8
0.76 0.03 0.21
Matches are distributed among these distances:
16 1 0.03
17 17 0.59
18 10 0.34
19 1 0.03
ACGTcount: A:0.78, C:0.02, G:0.06, T:0.14
Consensus pattern (17 bp):
AATAATAAAAATAAAAC
Found at i:824158 original size:17 final size:16
Alignment explanation
Indices: 824136--824175 Score: 53
Period size: 17 Copynumber: 2.4 Consensus size: 16
824126 AGTAAAACAA
*
824136 AAATAAAAATAAAATT
1 AAATAAAAAGAAAATT
*
824152 AAGATAAAAAGAATATT
1 AA-ATAAAAAGAAAATT
824169 AAATAAA
1 AAATAAA
824176 CCTAATCTAA
Statistics
Matches: 21, Mismatches: 2, Indels: 2
0.84 0.08 0.08
Matches are distributed among these distances:
16 7 0.33
17 14 0.67
ACGTcount: A:0.72, C:0.00, G:0.05, T:0.23
Consensus pattern (16 bp):
AAATAAAAAGAAAATT
Found at i:824619 original size:20 final size:19
Alignment explanation
Indices: 824575--824619 Score: 54
Period size: 20 Copynumber: 2.3 Consensus size: 19
824565 CGGTTGAAGA
* *
824575 TTCACTGGATTCTGGGTTT
1 TTCACTAGAATCTGGGTTT
824594 TGTCACTAGAATCTGGGTTT
1 T-TCACTAGAATCTGGGTTT
824614 CTTCAC
1 -TTCAC
824620 CGGAAGTTCA
Statistics
Matches: 22, Mismatches: 2, Indels: 3
0.81 0.07 0.11
Matches are distributed among these distances:
19 1 0.05
20 20 0.91
21 1 0.05
ACGTcount: A:0.16, C:0.20, G:0.22, T:0.42
Consensus pattern (19 bp):
TTCACTAGAATCTGGGTTT
Found at i:824973 original size:58 final size:58
Alignment explanation
Indices: 824900--825011 Score: 206
Period size: 58 Copynumber: 1.9 Consensus size: 58
824890 TTGCTTACTG
824900 TTTTTCTTCTATCCAGCATTCTGTTCCAGAGGTCCCTTTTATAGGGATTGATCAAGAA
1 TTTTTCTTCTATCCAGCATTCTGTTCCAGAGGTCCCTTTTATAGGGATTGATCAAGAA
* *
824958 TTTTTCTTCTGTCCAGTATTCTGTTCCAGAGGTCCCTTTTATAGGGATTGATCA
1 TTTTTCTTCTATCCAGCATTCTGTTCCAGAGGTCCCTTTTATAGGGATTGATCA
825012 GGAGTTCCTG
Statistics
Matches: 52, Mismatches: 2, Indels: 0
0.96 0.04 0.00
Matches are distributed among these distances:
58 52 1.00
ACGTcount: A:0.20, C:0.21, G:0.18, T:0.42
Consensus pattern (58 bp):
TTTTTCTTCTATCCAGCATTCTGTTCCAGAGGTCCCTTTTATAGGGATTGATCAAGAA
Found at i:825292 original size:3 final size:3
Alignment explanation
Indices: 825286--825333 Score: 51
Period size: 3 Copynumber: 14.7 Consensus size: 3
825276 TTACAAGAAA
*
825286 AAT AAT AAAT AAT AAT AAT AAT AAT AAAT AAAT TAT AAT ATAT AAT AA
1 AAT AAT -AAT AAT AAT AAT AAT AAT -AAT -AAT AAT AAT A-AT AAT AA
825334 ATATAGAACT
Statistics
Matches: 40, Mismatches: 2, Indels: 6
0.83 0.04 0.12
Matches are distributed among these distances:
3 27 0.68
4 13 0.32
ACGTcount: A:0.67, C:0.00, G:0.00, T:0.33
Consensus pattern (3 bp):
AAT
Done.