Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167840.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_111, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  81376

Tables:   1   

This is table  1  of  1  ( 43 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10369--10417
8
5.9
8
83
7
62
85
0
10
4
0.71
10368--10420
16
3.2
16
86
2
70
86
0
9
3
0.68
11442--11900
42
10.8
42
77
9
310
27
16
18
37
1.93
11611--11899
43
6.7
44
81
8
247
25
15
20
38
1.92
11608--11899
129
2.2
129
80
9
308
25
16
20
38
1.92
11705--11899
88
2.2
90
85
4
265
25
15
20
38
1.92
12095--12221
26
4.8
26
70
19
77
24
2
3
70
1.14
12095--12184
26
3.3
26
77
16
78
24
2
3
70
1.14
12087--12240
19
8.1
18
69
21
75
24
3
2
69
1.18
12087--12240
37
4.1
36
73
15
107
24
3
2
69
1.18
12187--12242
23
2.4
23
77
11
60
28
5
0
66
1.14
13238--13284
16
2.7
17
83
9
60
19
2
0
78
0.85
13303--13517
58
3.7
58
88
6
310
43
7
13
35
1.73
13381--13475
31
3.2
31
62
22
76
42
9
12
35
1.76
13303--13517
117
1.8
118
90
5
348
43
7
13
35
1.73
15950--16173
115
1.9
115
89
0
349
33
12
13
40
1.82
23265--23771
238
2.1
239
81
2
572
35
10
12
41
1.78
23568--23951
187
2.1
187
85
3
504
33
11
14
40
1.82
23333--24198
426
2.0
423
80
5
949
34
11
12
40
1.80
23755--24309
239
2.3
237
83
5
695
34
11
12
40
1.80
25038--25100
28
2.2
28
85
0
81
25
1
28
44
1.63
25085--25124
12
3.3
12
89
0
62
20
7
32
40
1.80
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28310--28380
35
2.0
36
86
2
99
33
18
9
38
1.84
28493--28724
127
1.8
126
81
6
290
34
15
13
36
1.87
30074--30115
22
1.9
22
95
0
75
38
11
9
40
1.75
34113--34155
22
2.0
22
90
0
68
32
11
9
46
1.72
38539--38602
21
3.2
20
74
10
60
46
1
0
51
1.10
38569--38636
29
2.3
30
78
14
79
54
1
0
44
1.09
38548--38647
50
2.0
50
82
9
123
54
2
1
43
1.18
39543--39575
3
11.0
3
93
0
57
63
0
3
33
1.10
40489--40554
22
3.0
20
86
6
69
48
1
6
43
1.36
40499--40554
22
2.5
22
94
2
94
50
1
7
41
1.40
40530--40597
30
2.3
30
82
10
77
45
8
7
38
1.63
43133--43179
15
3.1
15
74
20
53
34
2
2
61
1.20
46630--46804
47
3.7
48
73
6
124
44
17
10
28
1.81
46676--46815
47
3.0
47
73
8
131
42
17
12
28
1.85
47493--47539
23
2.0
24
91
4
78
19
17
6
57
1.60
47834--47894
31
2.0
31
90
6
88
36
22
11
29
1.90
58483--58526
20
2.3
19
81
11
54
63
0
0
36
0.95
61755--61792
20
1.9
20
94
0
67
52
2
0
44
1.14
63180--63248
26
2.6
27
77
9
79
42
2
1
53
1.24
70586--70644
21
2.8
21
89
0
91
42
8
28
20
1.81
77885--77950
33
2.0
33
96
0
123
15
3
25
56
1.54

Tables:   1

The End!