Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167975.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  46123

Tables:   1   

This is table  1  of  1  ( 53 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1018--1050
16
2.0
17
88
5
50
57
3
6
33
1.38
1221--1348
65
2.0
65
82
3
159
35
17
11
34
1.87
1188--1327
32
4.3
33
75
3
113
40
18
10
31
1.84
1251--1348
33
3.0
32
77
7
108
33
18
11
36
1.86
1571--1668
10
9.4
10
76
8
79
47
3
5
43
1.40
1612--1668
20
2.8
20
89
0
87
56
0
0
43
0.99
1612--1668
30
1.9
30
96
0
105
56
0
0
43
0.99
1886--1923
16
2.4
16
90
0
58
44
0
2
52
1.14
8458--8510
22
2.3
23
83
3
72
64
0
3
32
1.12
9364--9405
14
2.8
16
82
13
54
14
16
0
69
1.20
9688--9754
34
1.9
35
85
11
93
77
1
17
2
0.97
11237--11287
18
2.9
17
83
11
68
29
1
1
66
1.13
23430--23872
49
9.0
49
81
2
487
29
13
21
34
1.92
23443--23872
148
2.9
146
83
4
524
29
13
21
34
1.92
24126--24152
7
3.9
7
100
0
54
74
0
0
25
0.83
24110--24143
17
2.0
17
94
0
59
76
2
0
20
0.92
24399--24429
12
2.6
12
89
0
53
64
6
16
12
1.47
25204--25228
13
1.9
13
100
0
50
72
4
0
24
1.02
25207--25266
29
2.1
29
84
6
77
71
6
0
21
1.08
25435--25484
18
2.9
16
82
11
55
68
0
6
26
1.13
26456--26580
25
5.1
24
70
17
96
50
0
0
48
1.06
26456--26544
8
10.8
8
72
18
58
49
0
1
49
1.08
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
26456--26502
18
2.7
17
75
15
51
48
0
2
48
1.13
26515--26581
6
11.0
6
70
20
50
53
0
0
46
1.00
26495--26570
36
2.2
35
86
6
102
51
0
0
48
1.00
26515--26581
19
3.6
19
75
15
77
53
0
0
46
1.00
26597--26671
28
2.7
29
76
8
86
41
2
1
54
1.23
26899--26941
18
2.4
18
88
7
61
55
0
0
44
0.99
26877--26932
22
2.5
22
78
16
62
48
0
1
50
1.11
27197--27260
24
2.7
23
77
17
69
57
0
0
42
0.98
27202--27261
22
2.6
23
84
7
77
56
0
0
43
0.99
28883--28912
2
15.0
2
100
0
60
50
0
0
50
1.00
30283--30319
19
2.1
17
90
10
56
51
0
8
40
1.32
30605--30635
16
1.9
16
93
0
53
35
3
22
38
1.71
32763--32790
6
4.7
6
100
0
56
17
0
0
82
0.68
32763--32801
18
2.2
18
86
9
53
17
2
0
79
0.84
32800--32870
13
5.1
14
75
16
60
33
2
2
60
1.26
32790--32876
39
2.3
37
81
14
106
31
3
2
63
1.23
32789--32996
22
9.4
22
69
20
121
30
4
2
62
1.27
32834--32989
65
2.3
69
84
9
207
32
4
1
61
1.27
32899--32991
43
2.3
42
80
14
97
32
4
2
61
1.27
33801--33834
17
2.0
17
88
11
52
29
2
2
64
1.22
33854--33891
16
2.3
16
90
4
58
15
2
0
81
0.80
33851--33892
17
2.5
17
81
14
59
16
2
0
80
0.81
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
33846--33902
22
2.6
22
79
17
66
15
3
3
77
1.05
37278--37308
15
2.1
15
93
0
53
19
22
6
51
1.69
44398--44440
9
4.8
9
78
21
54
81
0
9
9
0.88
44397--44443
12
3.7
12
84
15
67
82
0
8
8
0.83
44407--44446
15
2.7
15
84
0
62
85
0
7
7
0.76
45587--45815
40
5.6
41
77
14
215
24
14
21
39
1.91
46049--46101
17
3.1
18
86
8
83
33
0
0
66
0.92
46049--46119
37
2.0
35
83
10
90
35
1
0
63
1.03
46049--46122
35
2.1
35
82
9
89
35
1
0
63
1.03

Tables:   1

The End!