Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_019167977.1 Durio zibethinus cultivar Musang King isolate D1 unplaced genomic scaffold, Duzib1.0 scaffold_235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45336

Tables:   1   

This is table  1  of  1  ( 28 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9903--9947
23
2.0
23
90
0
72
68
6
11
13
1.37
10602--10825
95
2.4
94
81
5
229
41
6
7
44
1.59
12728--12769
22
1.9
22
85
0
57
38
19
14
28
1.90
12921--12962
22
1.9
22
85
0
57
26
16
21
35
1.94
13212--13635
144
2.9
142
75
7
388
33
14
13
38
1.86
14104--14272
62
2.8
59
84
7
223
38
11
7
42
1.69
14282--14377
46
2.1
46
83
11
117
73
1
9
15
1.13
14317--14378
21
3.2
19
86
6
81
79
0
6
14
0.93
14317--14379
19
3.3
19
80
17
60
77
0
7
14
0.97
14395--14421
3
9.0
3
100
0
54
66
0
0
33
0.92
14339--14432
19
5.3
18
70
19
54
70
2
4
23
1.16
22498--22526
9
3.3
9
90
9
51
79
0
0
20
0.74
23599--23643
23
2.0
23
90
0
72
68
6
11
13
1.37
24928--24969
7
6.0
7
81
10
50
16
2
0
80
0.81
24928--24967
21
1.9
21
89
0
62
15
2
0
82
0.77
25712--25752
17
2.4
18
84
8
50
65
0
7
26
1.18
26146--26512
141
2.6
140
74
10
352
41
12
14
30
1.84
26704--26745
22
1.9
22
85
0
57
23
16
23
35
1.95
26995--27417
143
2.9
145
75
7
371
33
14
13
38
1.85
27886--28047
59
2.7
61
87
5
251
35
12
6
45
1.68
28063--28154
45
2.0
46
83
12
118
76
1
7
15
1.07
28106--28217
6
18.0
6
67
20
52
74
1
2
21
1.04
Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
28092--28151
19
3.2
19
86
9
70
80
0
5
15
0.88
28092--28156
25
2.9
22
80
15
71
78
0
6
15
0.94
41273--41301
9
3.3
9
90
9
51
79
0
0
20
0.74
42377--42421
23
2.0
23
90
0
72
68
6
11
13
1.37
43699--43733
7
5.0
7
89
0
52
17
2
0
80
0.84
44368--44412
19
2.3
19
84
7
54
66
0
4
28
1.11

Tables:   1

The End!